ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags12h17
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|U43498.1|HVU43498 Hordeum vulgare 0-methyltransferase mRNA, p... 1156 0.0
2gb|U54767.1|HVU54767 Hordeum vulgare caffeic acid O-methyltransf... 765 0.0
3dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 98 4e-17
4emb|AL845348.4|CNS08CBA Oryza sativa chromosome 12, . BAC OSJNBb... 98 4e-17
5gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 98 4e-17
6emb|BX664711.2|CNS09SC1 Oryza sativa chromosome 12, . BAC B1001E... 98 4e-17
7ref|XM_470970.1| Oryza sativa (japonica cultivar-group), predic... 72 3e-09
8emb|AL662935.3|OSJN00146 Oryza sativa genomic DNA, chromosome 4,... 72 3e-09
9dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 72 3e-09
10dbj|AK069960.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 2e-07
11emb|AL713947.3|CNS07YPQ Oryza sativa chromosome 12, . BAC OJ1003... 66 2e-07
12ref|XM_474640.1| Oryza sativa (japonica cultivar-group), predic... 58 4e-05
13emb|AL731589.3|OSJN00239 Oryza sativa genomic DNA, chromosome 4,... 58 4e-05
14dbj|AK098998.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 4e-05
15dbj|AK072016.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 4e-05
16gb|U63634.1|MCU63634 Mesembryanthemum crystallinum inositol meth... 50 0.009
17gb|M87340.1|CIPIMT1A Mesembryanthemum crystallinum methyl transf... 50 0.009
18gb|AF067968.1|AF067968 Mesembryanthemum crystallinum caffeic aci... 46 0.14
19emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid compl... 44 0.57
20gb|AC165365.3| Mus musculus BAC clone RP23-28N13 from chromosome... 42 2.2
21gb|AC098738.2| Mus musculus BAC clone RP23-122F7 from 8, complet... 42 2.2
22ref|XM_722360.1| Plasmodium yoelii yoelii str. 17XNL hypothetica... 42 2.2
23ref|XM_670572.1| Plasmodium berghei strain ANKA hypothetical pro... 42 2.2
24gb|AY041136.1| Metopus palaeformis clone 4 alpha-tubulin gene, p... 42 2.2
25gb|AY041135.1| Metopus palaeformis clone 3 alpha-tubulin gene, p... 42 2.2
26gb|AY041134.1| Metopus palaeformis clone 2 alpha-tubulin gene, p... 42 2.2
27gb|AY041133.1| Metopus palaeformis clone 1 alpha-tubulin gene, p... 42 2.2
28dbj|AK134874.1| Mus musculus adult male olfactory brain cDNA, RI... 42 2.2
29gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 42 2.2
30gb|AC169981.3| Mus musculus BAC clone RP24-346E16 from chromosom... 42 2.2
31gb|AE000783.1| Borrelia burgdorferi B31, complete genome 42 2.2
32emb|CT573077.2| Medicago truncatula chromosome 5 clone mth2-43j1... 42 2.2
33gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1... 42 2.2
34gb|CP000013.1| Borrelia garinii PBi, complete genome 40 8.9
35gb|AC101802.9| Mus musculus chromosome 1, clone RP24-221A4, comp... 40 8.9
36gb|AC150386.2| Branchiostoma floridae clone CH302-103G16, comple... 40 8.9
37ref|XM_960728.1| Neurospora crassa OR74A hypothetical protein (N... 40 8.9
38ref|XM_954671.1| Neurospora crassa OR74A hypothetical protein (N... 40 8.9
39ref|XM_324860.1| Neurospora crassa OR74A hypothetical protein (N... 40 8.9
40ref|XM_331113.1| Neurospora crassa OR74A hypothetical protein (N... 40 8.9
41gb|AY642135.1| Homo sapiens interleukin 5 receptor, alpha (IL5RA... 40 8.9
42gb|AC093477.6| Mus musculus chromosome 1, clone RP23-58B6, compl... 40 8.9
43emb|AJ966296.1| Pisum sativum insertion site for PDR1 retrotrans... 40 8.9
44emb|Z67990.1|CEF02D10 Caenorhabditis elegans Cosmid F02D10, comp... 40 8.9
45gb|AC146052.3| Pan troglodytes BAC clone RP43-75P3 from 7, compl... 40 8.9
46emb|AL033376.17|HS278N12 Human DNA sequence from clone RP1-278N1... 40 8.9
47emb|AL021812.1|HSU86H4 Human DNA sequence from clone LL0XNC01-86... 40 8.9
48emb|BX572095.1| Prochlorococcus marinus MIT9313 complete genome;... 40 8.9
49emb|BX538352.1| Cryptosporidium parvum chromosome 6, complete se... 40 8.9
50gb|AC123904.5| Homo sapiens 12 BAC RP11-361A23 (Roswell Park Can... 40 8.9
51gb|AC125482.9| Medicago truncatula clone mth2-15h11, complete se... 40 8.9
52gb|AC024938.29| Homo sapiens 3 BAC RP11-485J7 (Roswell Park Canc... 40 8.9
53dbj|AB057033.1| Helicobacter pylori cagA gene for cytotoxin asso... 40 8.9
54dbj|AB057031.1| Helicobacter pylori cagA gene for cytotoxin asso... 40 8.9
55dbj|AB057016.1| Helicobacter pylori cagA gene for cytotoxin asso... 40 8.9
56dbj|AB057015.1| Helicobacter pylori cagA gene for cytotoxin asso... 40 8.9
57gb|AF269342.1|AF269342 Staphylococcus epidermidis strain SR1 clo... 40 8.9
58gb|AF269321.1|AF269321 Staphylococcus epidermidis strain SR1 clo... 40 8.9
59gb|AC007467.4|AC007467 Drosophila melanogaster, chromosome 2L, r... 40 8.9
60gb|AC153641.3| Mus musculus 6 BAC RP23-5F24 (Roswell Park Cancer... 40 8.9
61gb|AC018812.5|AC018812 Homo sapiens chromosome 3 clone RP11-161D... 40 8.9
62dbj|AB183825.1| Iris hollandica IhCOMT mRNA for Caffeic acid O-m... 40 8.9
63gb|AF270232.1|AF270232 Staphylococcus epidermidis strain SR1 clo... 40 8.9
64gb|AC024060.6| Homo sapiens chromosome 3 clone RP11-97C16 map 3p... 40 8.9
65gb|AC067918.1|AC067918 Neurospora crassa chromosome 7, clone G23... 40 8.9
66emb|BX908788.1| Neurospora crassa DNA linkage group VII BAC clon... 40 8.9
67gb|CP000029.1| Staphylococcus epidermidis RP62A, complete genome 40 8.9
68emb|BX470164.10| Zebrafish DNA sequence from clone DKEY-24L11 in... 40 8.9
69gb|AE003668.5| Drosophila melanogaster chromosome 2L, section 77... 40 8.9
70emb|BX255921.2| Zebrafish DNA sequence from clone CH211-236K19 i... 40 8.9
71gb|AC002352.1|AC002352 Homo sapiens 12q24 PAC P256D10 complete s... 40 8.9
72gb|AE015929.1| Staphylococcus epidermidis ATCC 12228, complete g... 40 8.9
73dbj|AP005671.2| Homo sapiens genomic DNA, chromosome 18 clone:CT... 40 8.9
74gb|AC131584.7| Mus musculus chromosome 1, clone RP23-215C21, com... 40 8.9
75gb|AC004759.1|AC004759 Drosophila melanogaster DNA sequence (P1s... 40 8.9
76emb|CR385047.19| Zebrafish DNA sequence from clone DKEY-221N16 i... 40 8.9
77gb|AC022002.5| Homo sapiens chromosome 3 clone RP11-198P17 map 3... 40 8.9
78gb|AC166321.3| Cavia porcellus, clone Cavia porcellus-24949357D4... 40 8.9
79emb|AL691509.6| Mouse DNA sequence from clone RP23-222A18 on chr... 40 8.9 
>gb|U43498.1|HVU43498 Hordeum vulgare 0-methyltransferase mRNA, partial cds
          Length = 983

 Score = 1156 bits (583), Expect = 0.0
 Identities = 611/620 (98%), Gaps = 2/620 (0%)
 Strand = Plus / Minus

                                                                       
Query: 31  aaataataaaatgaaaatcataaatgagcacgtgnagctagcagctcttattcgggnaca 90
           |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||
Sbjct: 943 aaataataaaatgaaaatcataaatgagcacgtg-agctagcagctcttattcggg-aca 886

                                                                       
Query: 91  ttattcgcnnnnnnngaagtgctcctattcgggactataccactctggtacgtggatgct 150
           ||||||||       |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 885 ttattcgcaaaaaaagaagtgctcctattcgggactataccactctggtacgtggatgct 826

                                                                       
Query: 151 acttggtgaactcaagagcgtaaaagttgaagaatatgtaggttttcttgatgccaccgg 210
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 825 acttggtgaactcaagagcgtaaaagttgaagaatatgtaggttttcttgatgccaccgg 766

                                                                       
Query: 211 taaatccagcttgtttggctagcctggcaaactccttctccgtcctctgctttgctccct 270
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 765 taaatccagcttgtttggctagcctggcaaactccttctccgtcctctgctttgctccct 706

                                                                       
Query: 271 tgaagagcacaaacatgatgatatccaaggtgaatgcatcccgcgctgtgagagacgagt 330
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 tgaagagcacaaacatgatgatatccaaggtgaatgcatcccgcgctgtgagagacgagt 646

                                                                       
Query: 331 ctgggttctccgggaggataccatccacgacgatcaccttcccgtcttttgggagagcgt 390
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 ctgggttctccgggaggataccatccacgacgatcaccttcccgtcttttgggagagcgt 586

                                                                       
Query: 391 tgtggcagttgcttagtattttgacgaactcgtcgtcgttaagcataagcgtgatccact 450
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 tgtggcagttgcttagtattttgacgaactcgtcgtcgttaagcataagcgtgatccact 526

                                                                       
Query: 451 gcaagagaaccgcatctccagtgggtatactctcatacatatctccagccacatgttcga 510
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 gcaagagaaccgcatctccagtgggtatactctcatacatatctccagccacatgttcga 466

                                                                       
Query: 511 ctcctggaagagggaggccttgggcgatgacatgaggcaggtcatagttgatgccggtca 570
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 ctcctggaagagggaggccttgggcgatgacatgaggcaggtcatagttgatgccggtca 406

                                                                       
Query: 571 tgtgcttgtacttagaggtgatcatccctagggtggagccggtgccaccaccgacgtcca 630
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 tgtgcttgtacttagaggtgatcatccctagggtggagccggtgccaccaccgacgtcca 346

                               
Query: 631 caagccgctgcacaccatcg 650
           ||||||||||||||||||||
Sbjct: 345 caagccgctgcacaccatcg 326
to top
>gb|U54767.1|HVU54767 Hordeum vulgare caffeic acid O-methyltransferase (HvCOMT) gene,
            complete cds
          Length = 5238

 Score =  765 bits (386), Expect = 0.0
 Identities = 414/423 (97%), Gaps = 2/423 (0%)
 Strand = Plus / Minus

                                                                        
Query: 31   aaataataaaatgaaaatcataaatgagcacgtgnagctagcagctcttattcgggnaca 90
            |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||
Sbjct: 4846 aaataataaaatgaaaatcataaatgagcacgtg-agctagcagctcttattcggg-aca 4789

                                                                        
Query: 91   ttattcgcnnnnnnngaagtgctcctattcgggactataccactctggtacgtggatgct 150
            ||||||||       |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4788 ttattcgcaaaaaaagaagtgctcctattcgggactataccactctggtacgtggatgct 4729

                                                                        
Query: 151  acttggtgaactcaagagcgtaaaagttgaagaatatgtaggttttcttgatgccaccgg 210
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4728 acttggtgaactcaagagcgtaaaagttgaagaatatgtaggttttcttgatgccaccgg 4669

                                                                        
Query: 211  taaatccagcttgtttggctagcctggcaaactccttctccgtcctctgctttgctccct 270
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4668 taaatccagcttgtttggctagcctggcaaactccttctccgtcctctgctttgctccct 4609

                                                                        
Query: 271  tgaagagcacaaacatgatgatatccaaggtgaatgcatcccgcgctgtgagagacgagt 330
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4608 tgaagagcacaaacatgatgatatccaaggtgaatgcatcccgcgctgtgagagacgagt 4549

                                                                        
Query: 331  ctgggttctccgggaggataccatccacgacgatcaccttcccgtcttttgggagagcgt 390
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4548 ctgggttctccgggaggataccatccacgacgatcaccttcccgtcttttgggagagcgt 4489

                                                                        
Query: 391  tgtggcagttgcttagtattttgacgaactcgtcgtcgttaagcataagcgtgatccact 450
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4488 tgtggcagttgcttagtattttgacgaactcgtcgtcgttaagcataagcgtgatccact 4429

               
Query: 451  gca 453
            |||
Sbjct: 4428 gca 4426



 Score =  274 bits (138), Expect = 3e-70
 Identities = 138/138 (100%)
 Strand = Plus / Minus

                                                                        
Query: 513  cctggaagagggaggccttgggcgatgacatgaggcaggtcatagttgatgccggtcatg 572
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3650 cctggaagagggaggccttgggcgatgacatgaggcaggtcatagttgatgccggtcatg 3591

                                                                        
Query: 573  tgcttgtacttagaggtgatcatccctagggtggagccggtgccaccaccgacgtccaca 632
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3590 tgcttgtacttagaggtgatcatccctagggtggagccggtgccaccaccgacgtccaca 3531

                              
Query: 633  agccgctgcacaccatcg 650
            ||||||||||||||||||
Sbjct: 3530 agccgctgcacaccatcg 3513



 Score =  135 bits (68), Expect = 2e-28
 Identities = 68/68 (100%)
 Strand = Plus / Minus

                                                                        
Query: 449  ctgcaagagaaccgcatctccagtgggtatactctcatacatatctccagccacatgttc 508
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3910 ctgcaagagaaccgcatctccagtgggtatactctcatacatatctccagccacatgttc 3851

                    
Query: 509  gactcctg 516
            ||||||||
Sbjct: 3850 gactcctg 3843
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 130/157 (82%)
 Strand = Plus / Minus

                                                                           
Query: 157     tgaactcaagagcgtaaaagttgaagaatatgtaggttttcttgatgccaccggtaaatc 216
               ||||||||||||| || ||||| ||||||||||||||   |   | |  ||||||||| |
Sbjct: 5374724 tgaactcaagagcatagaagttcaagaatatgtaggtcgaccgaaaggtaccggtaaagc 5374665

                                                                           
Query: 217     cagcttgtttggctagcctggcaaactccttctccgtcctctgctttgctcccttgaaga 276
               ||||||  ||||| ||| | |||||||| | |||||||||||| ||| || |||||||||
Sbjct: 5374664 cagcttccttggcaagctttgcaaactcttgctccgtcctctgttttcctaccttgaaga 5374605

                                                    
Query: 277     gcacaaacatgatgatatccaaggtgaatgcatcccg 313
               | ||||||||||| ||||||| |||||||| ||||||
Sbjct: 5374604 ggacaaacatgatcatatccatggtgaatgaatcccg 5374568



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 65/72 (90%)
 Strand = Plus / Minus

                                                                           
Query: 536     gatgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcat 595
               ||||||||||||||||||||||||||||||  | ||||||||||||   |||||||||||
Sbjct: 5364332 gatgacatgaggcaggtcatagttgatgcccctaatgtgcttgtaccgcgaggtgatcat 5364273

                           
Query: 596     ccctagggtgga 607
               ||| ||||||||
Sbjct: 5364272 ccccagggtgga 5364261



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 135/169 (79%)
 Strand = Plus / Minus

                                                                           
Query: 148     gctacttggtgaactcaagagcgtaaaagttgaagaatatgtaggttttcttgatgccac 207
               |||||||  |||||||||| ||||| ||||| ||||||||||||||   |  || |  ||
Sbjct: 5173415 gctacttattgaactcaagggcgtagaagttcaagaatatgtaggtcgaccggaaggtac 5173356

                                                                           
Query: 208     cggtaaatccagcttgtttggctagcctggcaaactccttctccgtcctctgctttgctc 267
               ||||||| ||||  |  ||||| ||| | |||||||| | ||| ||||| |||||  || 
Sbjct: 5173355 cggtaaagccagactccttggcaagctttgcaaactcttgctctgtcctgtgcttcccta 5173296

                                                                
Query: 268     ccttgaagagcacaaacatgatgatatccaaggtgaatgcatcccgcgc 316
               |||||||||| ||||||| ||| ||||||| |||||||| |||| ||||
Sbjct: 5173295 ccttgaagaggacaaacaagatcatatccatggtgaatgaatcctgcgc 5173247



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 86/105 (81%)
 Strand = Plus / Minus

                                                                           
Query: 536     gatgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcat 595
               |||||| |||||||||||||||||||||||  | || ||||| |||    ||||||||||
Sbjct: 5172160 gatgacgtgaggcaggtcatagttgatgcccctaatatgcttataccgctaggtgatcat 5172101

                                                            
Query: 596     ccctagggtggagccggtgccaccaccgacgtccacaagccgctg 640
               ||| |||||||| |||  ||| |||||| | || || ||||||||
Sbjct: 5172100 ccccagggtggatccgtcgcctccaccggcatcgacgagccgctg 5172056



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 52/60 (86%)
 Strand = Plus / Minus

                                                                           
Query: 449     ctgcaagagaaccgcatctccagtgggtatactctcatacatatctccagccacatgttc 508
               |||||| ||||  ||||||||| |||| | ||||||||||||||||||||| | ||||||
Sbjct: 5172597 ctgcaaaagaattgcatctccattgggcacactctcatacatatctccagctatatgttc 5172538
to top
>emb|AL845348.4|CNS08CBA Oryza sativa chromosome 12, . BAC OSJNBb0070A23 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 105645

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 130/157 (82%)
 Strand = Plus / Minus

                                                                         
Query: 157   tgaactcaagagcgtaaaagttgaagaatatgtaggttttcttgatgccaccggtaaatc 216
             ||||||||||||| || ||||| ||||||||||||||   |   | |  ||||||||| |
Sbjct: 46791 tgaactcaagagcatagaagttcaagaatatgtaggtcgaccgaaaggtaccggtaaagc 46732

                                                                         
Query: 217   cagcttgtttggctagcctggcaaactccttctccgtcctctgctttgctcccttgaaga 276
             ||||||  ||||| ||| | |||||||| | |||||||||||| ||| || |||||||||
Sbjct: 46731 cagcttccttggcaagctttgcaaactcttgctccgtcctctgttttcctaccttgaaga 46672

                                                  
Query: 277   gcacaaacatgatgatatccaaggtgaatgcatcccg 313
             | ||||||||||| ||||||| |||||||| ||||||
Sbjct: 46671 ggacaaacatgatcatatccatggtgaatgaatcccg 46635



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 65/72 (90%)
 Strand = Plus / Minus

                                                                         
Query: 536   gatgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcat 595
             ||||||||||||||||||||||||||||||  | ||||||||||||   |||||||||||
Sbjct: 36399 gatgacatgaggcaggtcatagttgatgcccctaatgtgcttgtaccgcgaggtgatcat 36340

                         
Query: 596   ccctagggtgga 607
             ||| ||||||||
Sbjct: 36339 ccccagggtgga 36328
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 130/157 (82%)
 Strand = Plus / Minus

                                                                           
Query: 157     tgaactcaagagcgtaaaagttgaagaatatgtaggttttcttgatgccaccggtaaatc 216
               ||||||||||||| || ||||| ||||||||||||||   |   | |  ||||||||| |
Sbjct: 5374713 tgaactcaagagcatagaagttcaagaatatgtaggtcgaccgaaaggtaccggtaaagc 5374654

                                                                           
Query: 217     cagcttgtttggctagcctggcaaactccttctccgtcctctgctttgctcccttgaaga 276
               ||||||  ||||| ||| | |||||||| | |||||||||||| ||| || |||||||||
Sbjct: 5374653 cagcttccttggcaagctttgcaaactcttgctccgtcctctgttttcctaccttgaaga 5374594

                                                    
Query: 277     gcacaaacatgatgatatccaaggtgaatgcatcccg 313
               | ||||||||||| ||||||| |||||||| ||||||
Sbjct: 5374593 ggacaaacatgatcatatccatggtgaatgaatcccg 5374557



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 65/72 (90%)
 Strand = Plus / Minus

                                                                           
Query: 536     gatgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcat 595
               ||||||||||||||||||||||||||||||  | ||||||||||||   |||||||||||
Sbjct: 5364321 gatgacatgaggcaggtcatagttgatgcccctaatgtgcttgtaccgcgaggtgatcat 5364262

                           
Query: 596     ccctagggtgga 607
               ||| ||||||||
Sbjct: 5364261 ccccagggtgga 5364250



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 135/169 (79%)
 Strand = Plus / Minus

                                                                           
Query: 148     gctacttggtgaactcaagagcgtaaaagttgaagaatatgtaggttttcttgatgccac 207
               |||||||  |||||||||| ||||| ||||| ||||||||||||||   |  || |  ||
Sbjct: 5173397 gctacttattgaactcaagggcgtagaagttcaagaatatgtaggtcgaccggaaggtac 5173338

                                                                           
Query: 208     cggtaaatccagcttgtttggctagcctggcaaactccttctccgtcctctgctttgctc 267
               ||||||| ||||  |  ||||| ||| | |||||||| | ||| ||||| |||||  || 
Sbjct: 5173337 cggtaaagccagactccttggcaagctttgcaaactcttgctctgtcctgtgcttcccta 5173278

                                                                
Query: 268     ccttgaagagcacaaacatgatgatatccaaggtgaatgcatcccgcgc 316
               |||||||||| ||||||| ||| ||||||| |||||||| |||| ||||
Sbjct: 5173277 ccttgaagaggacaaacaagatcatatccatggtgaatgaatcctgcgc 5173229



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 86/105 (81%)
 Strand = Plus / Minus

                                                                           
Query: 536     gatgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcat 595
               |||||| |||||||||||||||||||||||  | || ||||| |||    ||||||||||
Sbjct: 5172142 gatgacgtgaggcaggtcatagttgatgcccctaatatgcttataccgctaggtgatcat 5172083

                                                            
Query: 596     ccctagggtggagccggtgccaccaccgacgtccacaagccgctg 640
               ||| |||||||| |||  ||| |||||| | || || ||||||||
Sbjct: 5172082 ccccagggtggatccgtcgcctccaccggcatcgacgagccgctg 5172038



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 52/60 (86%)
 Strand = Plus / Minus

                                                                           
Query: 449     ctgcaagagaaccgcatctccagtgggtatactctcatacatatctccagccacatgttc 508
               |||||| ||||  ||||||||| |||| | ||||||||||||||||||||| | ||||||
Sbjct: 5172579 ctgcaaaagaattgcatctccattgggcacactctcatacatatctccagctatatgttc 5172520
to top
>emb|BX664711.2|CNS09SC1 Oryza sativa chromosome 12, . BAC B1001E08 of chromosome 12 of cultivar
             Nipponbare of ssp. japonica of Oryza sativa (rice),
             complete sequence
          Length = 141841

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 130/157 (82%)
 Strand = Plus / Plus

                                                                         
Query: 157   tgaactcaagagcgtaaaagttgaagaatatgtaggttttcttgatgccaccggtaaatc 216
             ||||||||||||| || ||||| ||||||||||||||   |   | |  ||||||||| |
Sbjct: 91084 tgaactcaagagcatagaagttcaagaatatgtaggtcgaccgaaaggtaccggtaaagc 91143

                                                                         
Query: 217   cagcttgtttggctagcctggcaaactccttctccgtcctctgctttgctcccttgaaga 276
             ||||||  ||||| ||| | |||||||| | |||||||||||| ||| || |||||||||
Sbjct: 91144 cagcttccttggcaagctttgcaaactcttgctccgtcctctgttttcctaccttgaaga 91203

                                                  
Query: 277   gcacaaacatgatgatatccaaggtgaatgcatcccg 313
             | ||||||||||| ||||||| |||||||| ||||||
Sbjct: 91204 ggacaaacatgatcatatccatggtgaatgaatcccg 91240



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 65/72 (90%)
 Strand = Plus / Plus

                                                                          
Query: 536    gatgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcat 595
              ||||||||||||||||||||||||||||||  | ||||||||||||   |||||||||||
Sbjct: 101476 gatgacatgaggcaggtcatagttgatgcccctaatgtgcttgtaccgcgaggtgatcat 101535

                          
Query: 596    ccctagggtgga 607
              ||| ||||||||
Sbjct: 101536 ccccagggtgga 101547
to top
>ref|XM_470970.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1065

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 78/92 (84%)
 Strand = Plus / Minus

                                                                       
Query: 537 atgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcatc 596
           |||||||||||||||||  |||| | |||||| |||| ||||||| | || |||||||||
Sbjct: 677 atgacatgaggcaggtcgaagttaacgccggtgatgttcttgtacctcgaagtgatcatc 618

                                           
Query: 597 cctagggtggagccggtgccaccaccgacgtc 628
            | ||||||| ||||||||| || ||||||||
Sbjct: 617 tccagggtggcgccggtgcccccgccgacgtc 586
to top
>emb|AL662935.3|OSJN00146 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0094O15,
              complete sequence
          Length = 144778

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 78/92 (84%)
 Strand = Plus / Minus

                                                                          
Query: 537    atgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcatc 596
              |||||||||||||||||  |||| | |||||| |||| ||||||| | || |||||||||
Sbjct: 103606 atgacatgaggcaggtcgaagttaacgccggtgatgttcttgtacctcgaagtgatcatc 103547

                                              
Query: 597    cctagggtggagccggtgccaccaccgacgtc 628
               | ||||||| ||||||||| || ||||||||
Sbjct: 103546 tccagggtggcgccggtgcccccgccgacgtc 103515
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4,
              complete sequence
          Length = 35498469

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 78/92 (84%)
 Strand = Plus / Minus

                                                                          
Query: 537    atgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcatc 596
              |||||||||||||||||  |||| | |||||| |||| ||||||| | || |||||||||
Sbjct: 307786 atgacatgaggcaggtcgaagttaacgccggtgatgttcttgtacctcgaagtgatcatc 307727

                                              
Query: 597    cctagggtggagccggtgccaccaccgacgtc 628
               | ||||||| ||||||||| || ||||||||
Sbjct: 307726 tccagggtggcgccggtgcccccgccgacgtc 307695



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 77/93 (82%)
 Strand = Plus / Minus

                                                                           
Query: 536     gatgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcat 595
               ||||||||| || |||||  |||| | |||||| || |||||||||   |||||||||||
Sbjct: 5127584 gatgacatggggtaggtcgaagttaacgccggtgatatgcttgtaccgggaggtgatcat 5127525

                                                
Query: 596     ccctagggtggagccggtgccaccaccgacgtc 628
               | | ||||||| ||||||||| || ||||||||
Sbjct: 5127524 ctccagggtggcgccggtgcccccgccgacgtc 5127492
to top
>dbj|AK069960.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023037K22, full
           insert sequence
          Length = 1233

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 75/89 (84%)
 Strand = Plus / Minus

                                                                       
Query: 540 acatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcatccct 599
           ||||||||||||||  |||| | |||||| |||| ||||||| | || ||||||||| | 
Sbjct: 684 acatgaggcaggtcgaagttaacgccggtgatgttcttgtacctcgaagtgatcatctcc 625

                                        
Query: 600 agggtggagccggtgccaccaccgacgtc 628
           ||||||| ||||||||| || ||||||||
Sbjct: 624 agggtggcgccggtgcccccgccgacgtc 596
to top
>emb|AL713947.3|CNS07YPQ Oryza sativa chromosome 12, . BAC OJ1003_A04 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 124959

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 135/169 (79%)
 Strand = Plus / Plus

                                                                         
Query: 148   gctacttggtgaactcaagagcgtaaaagttgaagaatatgtaggttttcttgatgccac 207
             |||||||  |||||||||| ||||| ||||| ||||||||||||||   |  || |  ||
Sbjct: 90184 gctacttattgaactcaagggcgtagaagttcaagaatatgtaggtcgaccggaaggtac 90243

                                                                         
Query: 208   cggtaaatccagcttgtttggctagcctggcaaactccttctccgtcctctgctttgctc 267
             ||||||| ||||  |  ||||| ||| | |||||||| | ||| ||||| |||||  || 
Sbjct: 90244 cggtaaagccagactccttggcaagctttgcaaactcttgctctgtcctgtgcttcccta 90303

                                                              
Query: 268   ccttgaagagcacaaacatgatgatatccaaggtgaatgcatcccgcgc 316
             |||||||||| ||||||| ||| ||||||| |||||||| |||| ||||
Sbjct: 90304 ccttgaagaggacaaacaagatcatatccatggtgaatgaatcctgcgc 90352



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 86/105 (81%)
 Strand = Plus / Plus

                                                                         
Query: 536   gatgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcat 595
             |||||| |||||||||||||||||||||||  | || ||||| |||    ||||||||||
Sbjct: 91439 gatgacgtgaggcaggtcatagttgatgcccctaatatgcttataccgctaggtgatcat 91498

                                                          
Query: 596   ccctagggtggagccggtgccaccaccgacgtccacaagccgctg 640
             ||| |||||||| |||  ||| |||||| | || || ||||||||
Sbjct: 91499 ccccagggtggatccgtcgcctccaccggcatcgacgagccgctg 91543



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 52/60 (86%)
 Strand = Plus / Plus

                                                                         
Query: 449   ctgcaagagaaccgcatctccagtgggtatactctcatacatatctccagccacatgttc 508
             |||||| ||||  ||||||||| |||| | ||||||||||||||||||||| | ||||||
Sbjct: 91002 ctgcaaaagaattgcatctccattgggcacactctcatacatatctccagctatatgttc 91061
to top
>ref|XM_474640.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1137

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 77/93 (82%)
 Strand = Plus / Minus

                                                                       
Query: 536 gatgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcat 595
           ||||||||| || |||||  |||| | |||||| || |||||||||   |||||||||||
Sbjct: 747 gatgacatggggtaggtcgaagttaacgccggtgatatgcttgtaccgggaggtgatcat 688

                                            
Query: 596 ccctagggtggagccggtgccaccaccgacgtc 628
           | | ||||||| ||||||||| || ||||||||
Sbjct: 687 ctccagggtggcgccggtgcccccgccgacgtc 655
to top
>emb|AL731589.3|OSJN00239 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039G19,
              complete sequence
          Length = 144144

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 77/93 (82%)
 Strand = Plus / Minus

                                                                          
Query: 536    gatgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcat 595
              ||||||||| || |||||  |||| | |||||| || |||||||||   |||||||||||
Sbjct: 103857 gatgacatggggtaggtcgaagttaacgccggtgatatgcttgtaccgggaggtgatcat 103798

                                               
Query: 596    ccctagggtggagccggtgccaccaccgacgtc 628
              | | ||||||| ||||||||| || ||||||||
Sbjct: 103797 ctccagggtggcgccggtgcccccgccgacgtc 103765
to top
>dbj|AK098998.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013104D16, full
           insert sequence
          Length = 1308

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 77/93 (82%)
 Strand = Plus / Minus

                                                                       
Query: 536 gatgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcat 595
           ||||||||| || |||||  |||| | |||||| || |||||||||   |||||||||||
Sbjct: 773 gatgacatggggtaggtcgaagttaacgccggtgatatgcttgtaccgggaggtgatcat 714

                                            
Query: 596 ccctagggtggagccggtgccaccaccgacgtc 628
           | | ||||||| ||||||||| || ||||||||
Sbjct: 713 ctccagggtggcgccggtgcccccgccgacgtc 681
to top
>dbj|AK072016.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013102F20, full
           insert sequence
          Length = 1365

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 77/93 (82%)
 Strand = Plus / Minus

                                                                       
Query: 536 gatgacatgaggcaggtcatagttgatgccggtcatgtgcttgtacttagaggtgatcat 595
           ||||||||| || |||||  |||| | |||||| || |||||||||   |||||||||||
Sbjct: 760 gatgacatggggtaggtcgaagttaacgccggtgatatgcttgtaccgggaggtgatcat 701

                                            
Query: 596 ccctagggtggagccggtgccaccaccgacgtc 628
           | | ||||||| ||||||||| || ||||||||
Sbjct: 700 ctccagggtggcgccggtgcccccgccgacgtc 668
to top
>gb|U63634.1|MCU63634 Mesembryanthemum crystallinum inositol methyltransferase (Imt1) gene,
            complete cds
          Length = 3929

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 537  atgacatgaggcaggtcatagttgatgcc 565
            ||||||||||||| |||||||||||||||
Sbjct: 2808 atgacatgaggcaagtcatagttgatgcc 2780
to top
>gb|M87340.1|CIPIMT1A Mesembryanthemum crystallinum methyl transferase (Imt1) mRNA,
           complete cds
          Length = 1494

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 537 atgacatgaggcaggtcatagttgatgcc 565
           ||||||||||||| |||||||||||||||
Sbjct: 756 atgacatgaggcaagtcatagttgatgcc 728
to top
>gb|AF067968.1|AF067968 Mesembryanthemum crystallinum caffeic acid 3-O-methyltransferase
           mRNA, partial cds
          Length = 1205

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 535 cgatgacatgaggcaggtcatagttgatgcc 565
           |||||||||||||||| ||| ||||||||||
Sbjct: 666 cgatgacatgaggcagatcaaagttgatgcc 636
to top
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence
          Length = 2094509

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 625     cgtccacaagccgctgcacacc 646
               ||||||||||||||||||||||
Sbjct: 1987800 cgtccacaagccgctgcacacc 1987779
to top
>gb|AC165365.3| Mus musculus BAC clone RP23-28N13 from chromosome 6, complete sequence
          Length = 238262

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 483    tcatacatatctccagccacatgtt 507
              |||||||||| ||||||||||||||
Sbjct: 237760 tcatacatatatccagccacatgtt 237784
to top
>gb|AC098738.2| Mus musculus BAC clone RP23-122F7 from 8, complete sequence
          Length = 216974

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 31    aaataataaaatgaaaatcataaat 55
             |||| ||||||||||||||||||||
Sbjct: 79608 aaattataaaatgaaaatcataaat 79632
to top
>ref|XM_722360.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY06739)
           partial mRNA
          Length = 1143

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 27  tagnaaataataaaatgaaaatcataaatgag 58
           ||| |||||||||||||||||  |||||||||
Sbjct: 698 tagaaaataataaaatgaaaagtataaatgag 729
to top
>ref|XM_670572.1| Plasmodium berghei strain ANKA hypothetical protein (PB000547.00.0)
            partial mRNA
          Length = 2673

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 27   tagnaaataataaaatgaaaatcataaatgag 58
            ||| |||||||||||||||||  |||||||||
Sbjct: 1679 tagaaaataataaaatgaaaaatataaatgag 1710
to top
>gb|AY041136.1| Metopus palaeformis clone 4 alpha-tubulin gene, partial cds
          Length = 1095

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 606 gagccggtgccaccaccgacg 626
           |||||||||||||||||||||
Sbjct: 326 gagccggtgccaccaccgacg 306
to top
>gb|AY041135.1| Metopus palaeformis clone 3 alpha-tubulin gene, partial cds
          Length = 1095

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 606 gagccggtgccaccaccgacg 626
           |||||||||||||||||||||
Sbjct: 326 gagccggtgccaccaccgacg 306
to top
>gb|AY041134.1| Metopus palaeformis clone 2 alpha-tubulin gene, partial cds
          Length = 1094

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 606 gagccggtgccaccaccgacg 626
           |||||||||||||||||||||
Sbjct: 326 gagccggtgccaccaccgacg 306
to top
>gb|AY041133.1| Metopus palaeformis clone 1 alpha-tubulin gene, partial cds
          Length = 1082

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 606 gagccggtgccaccaccgacg 626
           |||||||||||||||||||||
Sbjct: 313 gagccggtgccaccaccgacg 293
to top
>dbj|AK134874.1| Mus musculus adult male olfactory brain cDNA, RIKEN full-length
            enriched library, clone:6430501C11
            product:unclassifiable, full insert sequence
          Length = 1789

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 483  tcatacatatctccagccacatgtt 507
            |||||||||| ||||||||||||||
Sbjct: 1024 tcatacatatatccagccacatgtt 1048
to top
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 614     gccaccaccgacgtccacaag 634
               |||||||||||||||||||||
Sbjct: 4165857 gccaccaccgacgtccacaag 4165837
to top
>gb|AC169981.3| Mus musculus BAC clone RP24-346E16 from chromosome 6, complete sequence
          Length = 150872

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 483   tcatacatatctccagccacatgtt 507
             |||||||||| ||||||||||||||
Sbjct: 45951 tcatacatatatccagccacatgtt 45975
to top
>gb|AE000783.1| Borrelia burgdorferi B31, complete genome
          Length = 910724

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 38     aaaatgaaaatcataaatgag 58
              |||||||||||||||||||||
Sbjct: 751243 aaaatgaaaatcataaatgag 751223
to top
>emb|CT573077.2| Medicago truncatula chromosome 5 clone mth2-43j18, COMPLETE SEQUENCE
          Length = 142338

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 35    aataaaatgaaaatcataaat 55
             |||||||||||||||||||||
Sbjct: 57822 aataaaatgaaaatcataaat 57842
to top
>gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1375 complete genome
          Length = 1751080

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 175    agttgaagaatatgtaggttttctt 199
              |||||||||| ||||||||||||||
Sbjct: 313473 agttgaagaaaatgtaggttttctt 313449
to top
>gb|CP000013.1| Borrelia garinii PBi, complete genome
          Length = 904246

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 38     aaaatgaaaatcataaatga 57
              ||||||||||||||||||||
Sbjct: 753145 aaaatgaaaatcataaatga 753126
to top
>gb|AC101802.9| Mus musculus chromosome 1, clone RP24-221A4, complete sequence
          Length = 166975

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 38    aaaatgaaaatcataaatga 57
             ||||||||||||||||||||
Sbjct: 39628 aaaatgaaaatcataaatga 39647
to top
>gb|AC150386.2| Branchiostoma floridae clone CH302-103G16, complete sequence
          Length = 195926

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 605    ggagccggtgccaccaccga 624
              ||||||||||||||||||||
Sbjct: 156214 ggagccggtgccaccaccga 156233
to top
>ref|XM_960728.1| Neurospora crassa OR74A hypothetical protein (NCU00681.1) partial
           mRNA
          Length = 3549

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 514 ctggaagagggaggccttgg 533
           ||||||||||||||||||||
Sbjct: 111 ctggaagagggaggccttgg 92
to top
>ref|XM_954671.1| Neurospora crassa OR74A hypothetical protein (NCU02338.1) partial
           mRNA
          Length = 843

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 520 gagggaggccttgggcgatg 539
           ||||||||||||||||||||
Sbjct: 265 gagggaggccttgggcgatg 246
to top
>ref|XM_324860.1| Neurospora crassa OR74A hypothetical protein (NCU00681.1) partial
           mRNA
          Length = 3549

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 514 ctggaagagggaggccttgg 533
           ||||||||||||||||||||
Sbjct: 111 ctggaagagggaggccttgg 92
to top
>ref|XM_331113.1| Neurospora crassa OR74A hypothetical protein (NCU02338.1) partial
           mRNA
          Length = 843

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 520 gagggaggccttgggcgatg 539
           ||||||||||||||||||||
Sbjct: 265 gagggaggccttgggcgatg 246
to top
>gb|AY642135.1| Homo sapiens interleukin 5 receptor, alpha (IL5RA) gene, complete cds
          Length = 43944

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 35    aataaaatgaaaatcataaa 54
             ||||||||||||||||||||
Sbjct: 15438 aataaaatgaaaatcataaa 15419
to top
>gb|AC093477.6| Mus musculus chromosome 1, clone RP23-58B6, complete sequence
          Length = 225321

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 270    ttgaagagcacaaacatgat 289
              ||||||||||||||||||||
Sbjct: 180691 ttgaagagcacaaacatgat 180672
to top
>emb|AJ966296.1| Pisum sativum insertion site for PDR1 retrotransposon insertion,
           strain JI281, John Innes Pisum Collection Accession JI64
           (Pisum elatius RBIP 64x40)
          Length = 402

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 33  ataataaaatgaaaatcata 52
           ||||||||||||||||||||
Sbjct: 384 ataataaaatgaaaatcata 365
to top
>emb|Z67990.1|CEF02D10 Caenorhabditis elegans Cosmid F02D10, complete sequence
          Length = 25359

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 416   gaactcgtcgtcgttaagca 435
             ||||||||||||||||||||
Sbjct: 23437 gaactcgtcgtcgttaagca 23418
to top
>gb|AC146052.3| Pan troglodytes BAC clone RP43-75P3 from 7, complete sequence
          Length = 152119

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 31    aaataataaaatgaaaatca 50
             ||||||||||||||||||||
Sbjct: 53944 aaataataaaatgaaaatca 53963
to top
>emb|AL033376.17|HS278N12 Human DNA sequence from clone RP1-278N12 on chromosome 6q25.1-26
             Contains the 5' end of the gene for
             phosphoinositide-binding protein PIP3-E (KIAA0403),
             complete sequence
          Length = 78533

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 31    aaataataaaatgaaaatcataaa 54
             ||||||||||| ||||||||||||
Sbjct: 12198 aaataataaaaagaaaatcataaa 12221
to top
>emb|AL021812.1|HSU86H4 Human DNA sequence from clone LL0XNC01-86H4 on chromosome X, complete
             sequence
          Length = 45199

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 31    aaataataaaatgaaaatca 50
             ||||||||||||||||||||
Sbjct: 26937 aaataataaaatgaaaatca 26918
to top
>emb|BX572095.1| Prochlorococcus marinus MIT9313 complete genome; segment 1/7
          Length = 349391

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 235    tggcaaactccttctccgtc 254
              ||||||||||||||||||||
Sbjct: 340353 tggcaaactccttctccgtc 340372
to top
>emb|BX538352.1| Cryptosporidium parvum chromosome 6, complete sequence; segment 3/4
          Length = 293050

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 37    taaaatgaaaatcataaatg 56
             ||||||||||||||||||||
Sbjct: 88664 taaaatgaaaatcataaatg 88683
to top
>gb|AC123904.5| Homo sapiens 12 BAC RP11-361A23 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 125400

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 281    aaacatgatgatatccaagg 300
              ||||||||||||||||||||
Sbjct: 120643 aaacatgatgatatccaagg 120624
to top
>gb|AC125482.9| Medicago truncatula clone mth2-15h11, complete sequence
          Length = 129658

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 279    acaaacatgatgatatccaa 298
              ||||||||||||||||||||
Sbjct: 111959 acaaacatgatgatatccaa 111978
to top
>gb|AC024938.29| Homo sapiens 3 BAC RP11-485J7 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 63332

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 33    ataataaaatgaaaatcata 52
             ||||||||||||||||||||
Sbjct: 59336 ataataaaatgaaaatcata 59317
to top
>dbj|AB057033.1| Helicobacter pylori cagA gene for cytotoxin associated protein
           CagA, partial cds, 3' region, strain:JapanK101
          Length = 734

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 377 ttttgggagagcgttgtggc 396
           ||||||||||||||||||||
Sbjct: 137 ttttgggagagcgttgtggc 118
to top
>dbj|AB057031.1| Helicobacter pylori cagA gene for cytotoxin associated protein
           CagA, partial cds, 3' region, strain:JapanK89
          Length = 734

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 377 ttttgggagagcgttgtggc 396
           ||||||||||||||||||||
Sbjct: 137 ttttgggagagcgttgtggc 118
to top
>dbj|AB057016.1| Helicobacter pylori cagA gene for cytotoxin associated protein
           CagA, partial cds, 3' region, strain:JapanK41
          Length = 728

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 377 ttttgggagagcgttgtggc 396
           ||||||||||||||||||||
Sbjct: 137 ttttgggagagcgttgtggc 118
to top
>dbj|AB057015.1| Helicobacter pylori cagA gene for cytotoxin associated protein
           CagA, partial cds, 3' region, strain:JapanK35
          Length = 734

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 377 ttttgggagagcgttgtggc 396
           ||||||||||||||||||||
Sbjct: 137 ttttgggagagcgttgtggc 118
to top
>gb|AF269342.1|AF269342 Staphylococcus epidermidis strain SR1 clone step.1002d03 genomic
           sequence
          Length = 3734

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 172 aaaagttgaagaatatgtag 191
           ||||||||||||||||||||
Sbjct: 177 aaaagttgaagaatatgtag 158
to top
>gb|AF269321.1|AF269321 Staphylococcus epidermidis strain SR1 clone step.1002a08 genomic
            sequence
          Length = 3383

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 172  aaaagttgaagaatatgtag 191
            ||||||||||||||||||||
Sbjct: 2238 aaaagttgaagaatatgtag 2257
to top
>gb|AC007467.4|AC007467 Drosophila melanogaster, chromosome 2L, region 38E-38F, BAC clone
             BACR07D17, complete sequence
          Length = 173422

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 35    aataaaatgaaaatcataaa 54
             ||||||||||||||||||||
Sbjct: 27939 aataaaatgaaaatcataaa 27958
to top
>gb|AC153641.3| Mus musculus 6 BAC RP23-5F24 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 193417

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 31    aaataataaaatgaaaatca 50
             ||||||||||||||||||||
Sbjct: 81725 aaataataaaatgaaaatca 81744
to top
>gb|AC018812.5|AC018812 Homo sapiens chromosome 3 clone RP11-161D20 map 3p, complete sequence
          Length = 169199

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 35     aataaaatgaaaatcataaa 54
              ||||||||||||||||||||
Sbjct: 109012 aataaaatgaaaatcataaa 108993
to top
>dbj|AB183825.1| Iris hollandica IhCOMT mRNA for Caffeic acid O-methyltransferase,
           complete cds
          Length = 1303

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 462 gcatctccagtgggtatactctcatacatatctcca 497
           ||||||||| |||| | ||||||| |||||||||||
Sbjct: 788 gcatctccactgggaacactctcaaacatatctcca 753
to top
>gb|AF270232.1|AF270232 Staphylococcus epidermidis strain SR1 clone step.1055e11 genomic
            sequence
          Length = 2995

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 172  aaaagttgaagaatatgtag 191
            ||||||||||||||||||||
Sbjct: 1549 aaaagttgaagaatatgtag 1530
to top
>gb|AC024060.6| Homo sapiens chromosome 3 clone RP11-97C16 map 3p, complete sequence
          Length = 174313

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 35     aataaaatgaaaatcataaa 54
              ||||||||||||||||||||
Sbjct: 161271 aataaaatgaaaatcataaa 161252
to top
>gb|AC067918.1|AC067918 Neurospora crassa chromosome 7, clone G23-F12, complete sequence
          Length = 42412

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 520  gagggaggccttgggcgatg 539
            ||||||||||||||||||||
Sbjct: 5744 gagggaggccttgggcgatg 5763
to top
>emb|BX908788.1| Neurospora crassa DNA linkage group VII BAC clone B23N11
          Length = 46353

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 520   gagggaggccttgggcgatg 539
             ||||||||||||||||||||
Sbjct: 39948 gagggaggccttgggcgatg 39967
to top
>gb|CP000029.1| Staphylococcus epidermidis RP62A, complete genome
          Length = 2616530

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 172    aaaagttgaagaatatgtag 191
              ||||||||||||||||||||
Sbjct: 226670 aaaagttgaagaatatgtag 226689
to top
>emb|BX470164.10| Zebrafish DNA sequence from clone DKEY-24L11 in linkage group 18,
              complete sequence
          Length = 248419

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 208    cggtaaatccagcttgtttg 227
              ||||||||||||||||||||
Sbjct: 147510 cggtaaatccagcttgtttg 147491
to top
>gb|AE003668.5| Drosophila melanogaster chromosome 2L, section 77 of 83 of the complete
             sequence
          Length = 270158

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 35    aataaaatgaaaatcataaa 54
             ||||||||||||||||||||
Sbjct: 17753 aataaaatgaaaatcataaa 17772
to top
>emb|BX255921.2| Zebrafish DNA sequence from clone CH211-236K19 in linkage group 5,
             complete sequence
          Length = 142918

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 31    aaataataaaatgaaaatca 50
             ||||||||||||||||||||
Sbjct: 38783 aaataataaaatgaaaatca 38764
to top
>gb|AC002352.1|AC002352 Homo sapiens 12q24 PAC P256D10 complete sequence
          Length = 162405

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 227   ggctagcctggcaaactcct 246
             ||||||||||||||||||||
Sbjct: 87830 ggctagcctggcaaactcct 87811
to top
>gb|AE015929.1| Staphylococcus epidermidis ATCC 12228, complete genome
          Length = 2499279

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 172    aaaagttgaagaatatgtag 191
              ||||||||||||||||||||
Sbjct: 342005 aaaagttgaagaatatgtag 342024
to top
>dbj|AP005671.2| Homo sapiens genomic DNA, chromosome 18 clone:CTD-3096M3, complete
             sequence
          Length = 86000

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 266   tcccttgaagagcacaaaca 285
             ||||||||||||||||||||
Sbjct: 62557 tcccttgaagagcacaaaca 62538
to top
>gb|AC131584.7| Mus musculus chromosome 1, clone RP23-215C21, complete sequence
          Length = 197346

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 270   ttgaagagcacaaacatgat 289
             ||||||||||||||||||||
Sbjct: 79901 ttgaagagcacaaacatgat 79882
to top
>gb|AC004759.1|AC004759 Drosophila melanogaster DNA sequence (P1s DS04217 (D56) and DS00582
             (D85)), complete sequence
          Length = 142799

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 35    aataaaatgaaaatcataaa 54
             ||||||||||||||||||||
Sbjct: 61596 aataaaatgaaaatcataaa 61577
to top
>emb|CR385047.19| Zebrafish DNA sequence from clone DKEY-221N16 in linkage group 18,
              complete sequence
          Length = 193827

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 208    cggtaaatccagcttgtttg 227
              ||||||||||||||||||||
Sbjct: 173244 cggtaaatccagcttgtttg 173225
to top
>gb|AC022002.5| Homo sapiens chromosome 3 clone RP11-198P17 map 3p, complete sequence
          Length = 189097

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 35     aataaaatgaaaatcataaa 54
              ||||||||||||||||||||
Sbjct: 185081 aataaaatgaaaatcataaa 185100
to top
>gb|AC166321.3| Cavia porcellus, clone Cavia porcellus-24949357D4, complete sequence
          Length = 36966

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 32   aataataaaatgaaaatcat 51
            ||||||||||||||||||||
Sbjct: 3622 aataataaaatgaaaatcat 3641
to top
>emb|AL691509.6| Mouse DNA sequence from clone RP23-222A18 on chromosome 4, complete
            sequence
          Length = 217607

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 31   aaataataaaatgaaaatcataaa 54
            ||||||||||||||||||| ||||
Sbjct: 7170 aaataataaaatgaaaatcttaaa 7193


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,815,368
Number of Sequences: 3902068
Number of extensions: 4815368
Number of successful extensions: 99216
Number of sequences better than 10.0: 79
Number of HSP's better than 10.0 without gapping: 80
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 98854
Number of HSP's gapped (non-prelim): 358
length of query: 651
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 628
effective length of database: 17,143,297,704
effective search space: 10765990958112
effective search space used: 10765990958112
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top