ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags12h14
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|U43498.1|HVU43498 Hordeum vulgare 0-methyltransferase mRNA, p... 1043 0.0
2gb|U54767.1|HVU54767 Hordeum vulgare caffeic acid O-methyltransf... 779 0.0
3dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 96 2e-16
4emb|AL845348.4|CNS08CBA Oryza sativa chromosome 12, . BAC OSJNBb... 96 2e-16
5gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 96 2e-16
6emb|BX664711.2|CNS09SC1 Oryza sativa chromosome 12, . BAC B1001E... 96 2e-16
7emb|AL713947.3|CNS07YPQ Oryza sativa chromosome 12, . BAC OJ1003... 56 1e-04
8gb|U63634.1|MCU63634 Mesembryanthemum crystallinum inositol meth... 50 0.008
9gb|M87340.1|CIPIMT1A Mesembryanthemum crystallinum methyl transf... 50 0.008
10gb|AF067968.1|AF067968 Mesembryanthemum crystallinum caffeic aci... 46 0.13
11ref|XM_470970.1| Oryza sativa (japonica cultivar-group), predic... 42 2.0
12gb|AC165365.3| Mus musculus BAC clone RP23-28N13 from chromosome... 42 2.0
13gb|AC098738.2| Mus musculus BAC clone RP23-122F7 from 8, complet... 42 2.0
14ref|XM_722360.1| Plasmodium yoelii yoelii str. 17XNL hypothetica... 42 2.0
15ref|XM_670572.1| Plasmodium berghei strain ANKA hypothetical pro... 42 2.0
16emb|AL662935.3|OSJN00146 Oryza sativa genomic DNA, chromosome 4,... 42 2.0
17dbj|AK134874.1| Mus musculus adult male olfactory brain cDNA, RI... 42 2.0
18dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
19gb|AC169981.3| Mus musculus BAC clone RP24-346E16 from chromosom... 42 2.0
20gb|AE000783.1| Borrelia burgdorferi B31, complete genome 42 2.0
21emb|CT573077.2| Medicago truncatula chromosome 5 clone mth2-43j1... 42 2.0
22gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1... 42 2.0
23gb|CP000013.1| Borrelia garinii PBi, complete genome 40 8.0
24gb|AC101802.9| Mus musculus chromosome 1, clone RP24-221A4, comp... 40 8.0
25ref|XM_960728.1| Neurospora crassa OR74A hypothetical protein (N... 40 8.0
26ref|XM_954671.1| Neurospora crassa OR74A hypothetical protein (N... 40 8.0
27ref|XM_324860.1| Neurospora crassa OR74A hypothetical protein (N... 40 8.0
28ref|XM_331113.1| Neurospora crassa OR74A hypothetical protein (N... 40 8.0
29gb|AY642135.1| Homo sapiens interleukin 5 receptor, alpha (IL5RA... 40 8.0
30gb|AC093477.6| Mus musculus chromosome 1, clone RP23-58B6, compl... 40 8.0
31emb|AJ966296.1| Pisum sativum insertion site for PDR1 retrotrans... 40 8.0
32emb|Z67990.1|CEF02D10 Caenorhabditis elegans Cosmid F02D10, comp... 40 8.0
33gb|AC146052.3| Pan troglodytes BAC clone RP43-75P3 from 7, compl... 40 8.0
34emb|AL033376.17|HS278N12 Human DNA sequence from clone RP1-278N1... 40 8.0
35emb|AL021812.1|HSU86H4 Human DNA sequence from clone LL0XNC01-86... 40 8.0
36emb|CR382139.1| Debaryomyces hansenii chromosome G of strain CBS... 40 8.0
37emb|BX572095.1| Prochlorococcus marinus MIT9313 complete genome;... 40 8.0
38emb|BX538352.1| Cryptosporidium parvum chromosome 6, complete se... 40 8.0
39gb|AC123904.5| Homo sapiens 12 BAC RP11-361A23 (Roswell Park Can... 40 8.0
40gb|AC125482.9| Medicago truncatula clone mth2-15h11, complete se... 40 8.0
41gb|AC024938.29| Homo sapiens 3 BAC RP11-485J7 (Roswell Park Canc... 40 8.0
42dbj|AB057033.1| Helicobacter pylori cagA gene for cytotoxin asso... 40 8.0
43dbj|AB057031.1| Helicobacter pylori cagA gene for cytotoxin asso... 40 8.0
44dbj|AB057016.1| Helicobacter pylori cagA gene for cytotoxin asso... 40 8.0
45dbj|AB057015.1| Helicobacter pylori cagA gene for cytotoxin asso... 40 8.0
46gb|AF269342.1|AF269342 Staphylococcus epidermidis strain SR1 clo... 40 8.0
47gb|AF269321.1|AF269321 Staphylococcus epidermidis strain SR1 clo... 40 8.0
48gb|AC007467.4|AC007467 Drosophila melanogaster, chromosome 2L, r... 40 8.0
49gb|AC153641.3| Mus musculus 6 BAC RP23-5F24 (Roswell Park Cancer... 40 8.0
50gb|AC018812.5|AC018812 Homo sapiens chromosome 3 clone RP11-161D... 40 8.0
51dbj|AB183825.1| Iris hollandica IhCOMT mRNA for Caffeic acid O-m... 40 8.0
52gb|AF270232.1|AF270232 Staphylococcus epidermidis strain SR1 clo... 40 8.0
53gb|AC024060.6| Homo sapiens chromosome 3 clone RP11-97C16 map 3p... 40 8.0
54gb|AC067918.1|AC067918 Neurospora crassa chromosome 7, clone G23... 40 8.0
55emb|BX908788.1| Neurospora crassa DNA linkage group VII BAC clon... 40 8.0
56gb|CP000029.1| Staphylococcus epidermidis RP62A, complete genome 40 8.0
57emb|BX470164.10| Zebrafish DNA sequence from clone DKEY-24L11 in... 40 8.0
58gb|AE003668.5| Drosophila melanogaster chromosome 2L, section 77... 40 8.0
59emb|BX255921.2| Zebrafish DNA sequence from clone CH211-236K19 i... 40 8.0
60gb|AC002352.1|AC002352 Homo sapiens 12q24 PAC P256D10 complete s... 40 8.0
61gb|AE015929.1| Staphylococcus epidermidis ATCC 12228, complete g... 40 8.0
62dbj|AP005671.2| Homo sapiens genomic DNA, chromosome 18 clone:CT... 40 8.0
63gb|AC131584.7| Mus musculus chromosome 1, clone RP23-215C21, com... 40 8.0
64gb|AC004759.1|AC004759 Drosophila melanogaster DNA sequence (P1s... 40 8.0
65emb|CR385047.19| Zebrafish DNA sequence from clone DKEY-221N16 i... 40 8.0
66gb|AC022002.5| Homo sapiens chromosome 3 clone RP11-198P17 map 3... 40 8.0
67gb|AC166321.3| Cavia porcellus, clone Cavia porcellus-24949357D4... 40 8.0
68emb|AL691509.6| Mouse DNA sequence from clone RP23-222A18 on chr... 40 8.0 
>gb|U43498.1|HVU43498 Hordeum vulgare 0-methyltransferase mRNA, partial cds
          Length = 983

 Score = 1043 bits (526), Expect = 0.0
 Identities = 547/555 (98%), Gaps = 1/555 (0%)
 Strand = Plus / Minus

                                                                       
Query: 35  aaataataaaatgaaaatcataaatgagcacgtgagctagcagctcttattcgggacatt 94
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 943 aaataataaaatgaaaatcataaatgagcacgtgagctagcagctcttattcgggacatt 884

                                                                       
Query: 95  attcgcnnnnnnngaagtgctcctattcgggactataccactctggtacgtggatgctac 154
           ||||||       |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 883 attcgcaaaaaaagaagtgctcctattcgggactataccactctggtacgtggatgctac 824

                                                                       
Query: 155 ttggtgaactcaagcagcgtaaaagttgaagaatatgtaggttttcttgatgccaccggt 214
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 823 ttggtgaactcaag-agcgtaaaagttgaagaatatgtaggttttcttgatgccaccggt 765

                                                                       
Query: 215 aaatccagcttgtttggctagcctggcaaactccttctccgtcctctgctttgctccctt 274
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 764 aaatccagcttgtttggctagcctggcaaactccttctccgtcctctgctttgctccctt 705

                                                                       
Query: 275 gaagagcacaaacatgatgatatccaaggtgaatgcatcccgcgctgtgagagacgagtc 334
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 gaagagcacaaacatgatgatatccaaggtgaatgcatcccgcgctgtgagagacgagtc 645

                                                                       
Query: 335 tgggttctccgggaggataccatccacgacgatcaccttcccgtcttttgggagagcgtt 394
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 tgggttctccgggaggataccatccacgacgatcaccttcccgtcttttgggagagcgtt 585

                                                                       
Query: 395 gtggcagttgcttagtattttgacgaactcgtcgtcgttaagcataagcgtgatccactg 454
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 gtggcagttgcttagtattttgacgaactcgtcgtcgttaagcataagcgtgatccactg 525

                                                                       
Query: 455 caagagaaccgcatctccagtgggtatactctcatacatatctccagccacatgttcgac 514
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 caagagaaccgcatctccagtgggtatactctcatacatatctccagccacatgttcgac 465

                                                                       
Query: 515 tcctggaagagggaggccttgggcgatgacatgaggcaggtcatagttgatgccggtcat 574
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 tcctggaagagggaggccttgggcgatgacatgaggcaggtcatagttgatgccggtcat 405

                          
Query: 575 gtgcttgtacttaga 589
           |||||||||||||||
Sbjct: 404 gtgcttgtacttaga 390
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>gb|U54767.1|HVU54767 Hordeum vulgare caffeic acid O-methyltransferase (HvCOMT) gene,
            complete cds
          Length = 5238

 Score =  779 bits (393), Expect = 0.0
 Identities = 414/422 (98%), Gaps = 1/422 (0%)
 Strand = Plus / Minus

                                                                        
Query: 35   aaataataaaatgaaaatcataaatgagcacgtgagctagcagctcttattcgggacatt 94
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4846 aaataataaaatgaaaatcataaatgagcacgtgagctagcagctcttattcgggacatt 4787

                                                                        
Query: 95   attcgcnnnnnnngaagtgctcctattcgggactataccactctggtacgtggatgctac 154
            ||||||       |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4786 attcgcaaaaaaagaagtgctcctattcgggactataccactctggtacgtggatgctac 4727

                                                                        
Query: 155  ttggtgaactcaagcagcgtaaaagttgaagaatatgtaggttttcttgatgccaccggt 214
            |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4726 ttggtgaactcaag-agcgtaaaagttgaagaatatgtaggttttcttgatgccaccggt 4668

                                                                        
Query: 215  aaatccagcttgtttggctagcctggcaaactccttctccgtcctctgctttgctccctt 274
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4667 aaatccagcttgtttggctagcctggcaaactccttctccgtcctctgctttgctccctt 4608

                                                                        
Query: 275  gaagagcacaaacatgatgatatccaaggtgaatgcatcccgcgctgtgagagacgagtc 334
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4607 gaagagcacaaacatgatgatatccaaggtgaatgcatcccgcgctgtgagagacgagtc 4548

                                                                        
Query: 335  tgggttctccgggaggataccatccacgacgatcaccttcccgtcttttgggagagcgtt 394
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4547 tgggttctccgggaggataccatccacgacgatcaccttcccgtcttttgggagagcgtt 4488

                                                                        
Query: 395  gtggcagttgcttagtattttgacgaactcgtcgtcgttaagcataagcgtgatccactg 454
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4487 gtggcagttgcttagtattttgacgaactcgtcgtcgttaagcataagcgtgatccactg 4428

              
Query: 455  ca 456
            ||
Sbjct: 4427 ca 4426



 Score =  147 bits (74), Expect = 5e-32
 Identities = 74/74 (100%)
 Strand = Plus / Minus

                                                                        
Query: 516  cctggaagagggaggccttgggcgatgacatgaggcaggtcatagttgatgccggtcatg 575
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3650 cctggaagagggaggccttgggcgatgacatgaggcaggtcatagttgatgccggtcatg 3591

                          
Query: 576  tgcttgtacttaga 589
            ||||||||||||||
Sbjct: 3590 tgcttgtacttaga 3577



 Score =  135 bits (68), Expect = 2e-28
 Identities = 68/68 (100%)
 Strand = Plus / Minus

                                                                        
Query: 452  ctgcaagagaaccgcatctccagtgggtatactctcatacatatctccagccacatgttc 511
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3910 ctgcaagagaaccgcatctccagtgggtatactctcatacatatctccagccacatgttc 3851

                    
Query: 512  gactcctg 519
            ||||||||
Sbjct: 3850 gactcctg 3843
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 93/108 (86%)
 Strand = Plus / Minus

                                                                           
Query: 209     accggtaaatccagcttgtttggctagcctggcaaactccttctccgtcctctgctttgc 268
               ||||||||| |||||||  ||||| ||| | |||||||| | |||||||||||| ||| |
Sbjct: 5374675 accggtaaagccagcttccttggcaagctttgcaaactcttgctccgtcctctgttttcc 5374616

                                                               
Query: 269     tcccttgaagagcacaaacatgatgatatccaaggtgaatgcatcccg 316
               | |||||||||| ||||||||||| ||||||| |||||||| ||||||
Sbjct: 5374615 taccttgaagaggacaaacatgatcatatccatggtgaatgaatcccg 5374568



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 43/46 (93%)
 Strand = Plus / Minus

                                                             
Query: 539     gatgacatgaggcaggtcatagttgatgccggtcatgtgcttgtac 584
               ||||||||||||||||||||||||||||||  | ||||||||||||
Sbjct: 5364332 gatgacatgaggcaggtcatagttgatgcccctaatgtgcttgtac 5364287



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 52/60 (86%)
 Strand = Plus / Minus

                                                                           
Query: 452     ctgcaagagaaccgcatctccagtgggtatactctcatacatatctccagccacatgttc 511
               |||||| ||||  ||||||||| |||| | ||||||||||||||||||||| | ||||||
Sbjct: 5172597 ctgcaaaagaattgcatctccattgggcacactctcatacatatctccagctatatgttc 5172538



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                             
Query: 539     gatgacatgaggcaggtcatagttgatgcc 568
               |||||| |||||||||||||||||||||||
Sbjct: 5172160 gatgacgtgaggcaggtcatagttgatgcc 5172131
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>emb|AL845348.4|CNS08CBA Oryza sativa chromosome 12, . BAC OSJNBb0070A23 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 105645

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 93/108 (86%)
 Strand = Plus / Minus

                                                                         
Query: 209   accggtaaatccagcttgtttggctagcctggcaaactccttctccgtcctctgctttgc 268
             ||||||||| |||||||  ||||| ||| | |||||||| | |||||||||||| ||| |
Sbjct: 46742 accggtaaagccagcttccttggcaagctttgcaaactcttgctccgtcctctgttttcc 46683

                                                             
Query: 269   tcccttgaagagcacaaacatgatgatatccaaggtgaatgcatcccg 316
             | |||||||||| ||||||||||| ||||||| |||||||| ||||||
Sbjct: 46682 taccttgaagaggacaaacatgatcatatccatggtgaatgaatcccg 46635



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 43/46 (93%)
 Strand = Plus / Minus

                                                           
Query: 539   gatgacatgaggcaggtcatagttgatgccggtcatgtgcttgtac 584
             ||||||||||||||||||||||||||||||  | ||||||||||||
Sbjct: 36399 gatgacatgaggcaggtcatagttgatgcccctaatgtgcttgtac 36354
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 93/108 (86%)
 Strand = Plus / Minus

                                                                           
Query: 209     accggtaaatccagcttgtttggctagcctggcaaactccttctccgtcctctgctttgc 268
               ||||||||| |||||||  ||||| ||| | |||||||| | |||||||||||| ||| |
Sbjct: 5374664 accggtaaagccagcttccttggcaagctttgcaaactcttgctccgtcctctgttttcc 5374605

                                                               
Query: 269     tcccttgaagagcacaaacatgatgatatccaaggtgaatgcatcccg 316
               | |||||||||| ||||||||||| ||||||| |||||||| ||||||
Sbjct: 5374604 taccttgaagaggacaaacatgatcatatccatggtgaatgaatcccg 5374557



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 43/46 (93%)
 Strand = Plus / Minus

                                                             
Query: 539     gatgacatgaggcaggtcatagttgatgccggtcatgtgcttgtac 584
               ||||||||||||||||||||||||||||||  | ||||||||||||
Sbjct: 5364321 gatgacatgaggcaggtcatagttgatgcccctaatgtgcttgtac 5364276



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 52/60 (86%)
 Strand = Plus / Minus

                                                                           
Query: 452     ctgcaagagaaccgcatctccagtgggtatactctcatacatatctccagccacatgttc 511
               |||||| ||||  ||||||||| |||| | ||||||||||||||||||||| | ||||||
Sbjct: 5172579 ctgcaaaagaattgcatctccattgggcacactctcatacatatctccagctatatgttc 5172520



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                             
Query: 539     gatgacatgaggcaggtcatagttgatgcc 568
               |||||| |||||||||||||||||||||||
Sbjct: 5172142 gatgacgtgaggcaggtcatagttgatgcc 5172113
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>emb|BX664711.2|CNS09SC1 Oryza sativa chromosome 12, . BAC B1001E08 of chromosome 12 of cultivar
             Nipponbare of ssp. japonica of Oryza sativa (rice),
             complete sequence
          Length = 141841

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 93/108 (86%)
 Strand = Plus / Plus

                                                                         
Query: 209   accggtaaatccagcttgtttggctagcctggcaaactccttctccgtcctctgctttgc 268
             ||||||||| |||||||  ||||| ||| | |||||||| | |||||||||||| ||| |
Sbjct: 91133 accggtaaagccagcttccttggcaagctttgcaaactcttgctccgtcctctgttttcc 91192

                                                             
Query: 269   tcccttgaagagcacaaacatgatgatatccaaggtgaatgcatcccg 316
             | |||||||||| ||||||||||| ||||||| |||||||| ||||||
Sbjct: 91193 taccttgaagaggacaaacatgatcatatccatggtgaatgaatcccg 91240



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 43/46 (93%)
 Strand = Plus / Plus

                                                            
Query: 539    gatgacatgaggcaggtcatagttgatgccggtcatgtgcttgtac 584
              ||||||||||||||||||||||||||||||  | ||||||||||||
Sbjct: 101476 gatgacatgaggcaggtcatagttgatgcccctaatgtgcttgtac 101521
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>emb|AL713947.3|CNS07YPQ Oryza sativa chromosome 12, . BAC OJ1003_A04 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 124959

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 52/60 (86%)
 Strand = Plus / Plus

                                                                         
Query: 452   ctgcaagagaaccgcatctccagtgggtatactctcatacatatctccagccacatgttc 511
             |||||| ||||  ||||||||| |||| | ||||||||||||||||||||| | ||||||
Sbjct: 91002 ctgcaaaagaattgcatctccattgggcacactctcatacatatctccagctatatgttc 91061



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                           
Query: 539   gatgacatgaggcaggtcatagttgatgcc 568
             |||||| |||||||||||||||||||||||
Sbjct: 91439 gatgacgtgaggcaggtcatagttgatgcc 91468
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>gb|U63634.1|MCU63634 Mesembryanthemum crystallinum inositol methyltransferase (Imt1) gene,
            complete cds
          Length = 3929

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 540  atgacatgaggcaggtcatagttgatgcc 568
            ||||||||||||| |||||||||||||||
Sbjct: 2808 atgacatgaggcaagtcatagttgatgcc 2780
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>gb|M87340.1|CIPIMT1A Mesembryanthemum crystallinum methyl transferase (Imt1) mRNA,
           complete cds
          Length = 1494

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 540 atgacatgaggcaggtcatagttgatgcc 568
           ||||||||||||| |||||||||||||||
Sbjct: 756 atgacatgaggcaagtcatagttgatgcc 728
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>gb|AF067968.1|AF067968 Mesembryanthemum crystallinum caffeic acid 3-O-methyltransferase
           mRNA, partial cds
          Length = 1205

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 538 cgatgacatgaggcaggtcatagttgatgcc 568
           |||||||||||||||| ||| ||||||||||
Sbjct: 666 cgatgacatgaggcagatcaaagttgatgcc 636
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>ref|XM_470970.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1065

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                        
Query: 540 atgacatgaggcaggtcatagttgatgccggtcatgtgcttgtac 584
           |||||||||||||||||  |||| | |||||| |||| |||||||
Sbjct: 677 atgacatgaggcaggtcgaagttaacgccggtgatgttcttgtac 633
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>gb|AC165365.3| Mus musculus BAC clone RP23-28N13 from chromosome 6, complete sequence
          Length = 238262

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 486    tcatacatatctccagccacatgtt 510
              |||||||||| ||||||||||||||
Sbjct: 237760 tcatacatatatccagccacatgtt 237784
to top
>gb|AC098738.2| Mus musculus BAC clone RP23-122F7 from 8, complete sequence
          Length = 216974

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 35    aaataataaaatgaaaatcataaat 59
             |||| ||||||||||||||||||||
Sbjct: 79608 aaattataaaatgaaaatcataaat 79632
to top
>ref|XM_722360.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY06739)
           partial mRNA
          Length = 1143

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 31  tagnaaataataaaatgaaaatcataaatgag 62
           ||| |||||||||||||||||  |||||||||
Sbjct: 698 tagaaaataataaaatgaaaagtataaatgag 729
to top
>ref|XM_670572.1| Plasmodium berghei strain ANKA hypothetical protein (PB000547.00.0)
            partial mRNA
          Length = 2673

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 31   tagnaaataataaaatgaaaatcataaatgag 62
            ||| |||||||||||||||||  |||||||||
Sbjct: 1679 tagaaaataataaaatgaaaaatataaatgag 1710
to top
>emb|AL662935.3|OSJN00146 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0094O15,
              complete sequence
          Length = 144778

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                           
Query: 540    atgacatgaggcaggtcatagttgatgccggtcatgtgcttgtac 584
              |||||||||||||||||  |||| | |||||| |||| |||||||
Sbjct: 103606 atgacatgaggcaggtcgaagttaacgccggtgatgttcttgtac 103562
to top
>dbj|AK134874.1| Mus musculus adult male olfactory brain cDNA, RIKEN full-length
            enriched library, clone:6430501C11
            product:unclassifiable, full insert sequence
          Length = 1789

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 486  tcatacatatctccagccacatgtt 510
            |||||||||| ||||||||||||||
Sbjct: 1024 tcatacatatatccagccacatgtt 1048
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4,
              complete sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                           
Query: 540    atgacatgaggcaggtcatagttgatgccggtcatgtgcttgtac 584
              |||||||||||||||||  |||| | |||||| |||| |||||||
Sbjct: 307786 atgacatgaggcaggtcgaagttaacgccggtgatgttcttgtac 307742
to top
>gb|AC169981.3| Mus musculus BAC clone RP24-346E16 from chromosome 6, complete sequence
          Length = 150872

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 486   tcatacatatctccagccacatgtt 510
             |||||||||| ||||||||||||||
Sbjct: 45951 tcatacatatatccagccacatgtt 45975
to top
>gb|AE000783.1| Borrelia burgdorferi B31, complete genome
          Length = 910724

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 42     aaaatgaaaatcataaatgag 62
              |||||||||||||||||||||
Sbjct: 751243 aaaatgaaaatcataaatgag 751223
to top
>emb|CT573077.2| Medicago truncatula chromosome 5 clone mth2-43j18, COMPLETE SEQUENCE
          Length = 142338

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 39    aataaaatgaaaatcataaat 59
             |||||||||||||||||||||
Sbjct: 57822 aataaaatgaaaatcataaat 57842
to top
>gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1375 complete genome
          Length = 1751080

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 178    agttgaagaatatgtaggttttctt 202
              |||||||||| ||||||||||||||
Sbjct: 313473 agttgaagaaaatgtaggttttctt 313449
to top
>gb|CP000013.1| Borrelia garinii PBi, complete genome
          Length = 904246

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 42     aaaatgaaaatcataaatga 61
              ||||||||||||||||||||
Sbjct: 753145 aaaatgaaaatcataaatga 753126
to top
>gb|AC101802.9| Mus musculus chromosome 1, clone RP24-221A4, complete sequence
          Length = 166975

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 42    aaaatgaaaatcataaatga 61
             ||||||||||||||||||||
Sbjct: 39628 aaaatgaaaatcataaatga 39647
to top
>ref|XM_960728.1| Neurospora crassa OR74A hypothetical protein (NCU00681.1) partial
           mRNA
          Length = 3549

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 517 ctggaagagggaggccttgg 536
           ||||||||||||||||||||
Sbjct: 111 ctggaagagggaggccttgg 92
to top
>ref|XM_954671.1| Neurospora crassa OR74A hypothetical protein (NCU02338.1) partial
           mRNA
          Length = 843

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 523 gagggaggccttgggcgatg 542
           ||||||||||||||||||||
Sbjct: 265 gagggaggccttgggcgatg 246
to top
>ref|XM_324860.1| Neurospora crassa OR74A hypothetical protein (NCU00681.1) partial
           mRNA
          Length = 3549

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 517 ctggaagagggaggccttgg 536
           ||||||||||||||||||||
Sbjct: 111 ctggaagagggaggccttgg 92
to top
>ref|XM_331113.1| Neurospora crassa OR74A hypothetical protein (NCU02338.1) partial
           mRNA
          Length = 843

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 523 gagggaggccttgggcgatg 542
           ||||||||||||||||||||
Sbjct: 265 gagggaggccttgggcgatg 246
to top
>gb|AY642135.1| Homo sapiens interleukin 5 receptor, alpha (IL5RA) gene, complete cds
          Length = 43944

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 39    aataaaatgaaaatcataaa 58
             ||||||||||||||||||||
Sbjct: 15438 aataaaatgaaaatcataaa 15419
to top
>gb|AC093477.6| Mus musculus chromosome 1, clone RP23-58B6, complete sequence
          Length = 225321

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 273    ttgaagagcacaaacatgat 292
              ||||||||||||||||||||
Sbjct: 180691 ttgaagagcacaaacatgat 180672
to top
>emb|AJ966296.1| Pisum sativum insertion site for PDR1 retrotransposon insertion,
           strain JI281, John Innes Pisum Collection Accession JI64
           (Pisum elatius RBIP 64x40)
          Length = 402

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 37  ataataaaatgaaaatcata 56
           ||||||||||||||||||||
Sbjct: 384 ataataaaatgaaaatcata 365
to top
>emb|Z67990.1|CEF02D10 Caenorhabditis elegans Cosmid F02D10, complete sequence
          Length = 25359

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 419   gaactcgtcgtcgttaagca 438
             ||||||||||||||||||||
Sbjct: 23437 gaactcgtcgtcgttaagca 23418
to top
>gb|AC146052.3| Pan troglodytes BAC clone RP43-75P3 from 7, complete sequence
          Length = 152119

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 35    aaataataaaatgaaaatca 54
             ||||||||||||||||||||
Sbjct: 53944 aaataataaaatgaaaatca 53963
to top
>emb|AL033376.17|HS278N12 Human DNA sequence from clone RP1-278N12 on chromosome 6q25.1-26
             Contains the 5' end of the gene for
             phosphoinositide-binding protein PIP3-E (KIAA0403),
             complete sequence
          Length = 78533

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 35    aaataataaaatgaaaatcataaa 58
             ||||||||||| ||||||||||||
Sbjct: 12198 aaataataaaaagaaaatcataaa 12221
to top
>emb|AL021812.1|HSU86H4 Human DNA sequence from clone LL0XNC01-86H4 on chromosome X, complete
             sequence
          Length = 45199

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 35    aaataataaaatgaaaatca 54
             ||||||||||||||||||||
Sbjct: 26937 aaataataaaatgaaaatca 26918
to top
>emb|CR382139.1| Debaryomyces hansenii chromosome G of strain CBS767 of Debaryomyces
             hansenii
          Length = 2051428

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 169   cagcgtaaaagttgaagaat 188
             ||||||||||||||||||||
Sbjct: 30672 cagcgtaaaagttgaagaat 30653
to top
>emb|BX572095.1| Prochlorococcus marinus MIT9313 complete genome; segment 1/7
          Length = 349391

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 238    tggcaaactccttctccgtc 257
              ||||||||||||||||||||
Sbjct: 340353 tggcaaactccttctccgtc 340372
to top
>emb|BX538352.1| Cryptosporidium parvum chromosome 6, complete sequence; segment 3/4
          Length = 293050

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 41    taaaatgaaaatcataaatg 60
             ||||||||||||||||||||
Sbjct: 88664 taaaatgaaaatcataaatg 88683
to top
>gb|AC123904.5| Homo sapiens 12 BAC RP11-361A23 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 125400

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 284    aaacatgatgatatccaagg 303
              ||||||||||||||||||||
Sbjct: 120643 aaacatgatgatatccaagg 120624
to top
>gb|AC125482.9| Medicago truncatula clone mth2-15h11, complete sequence
          Length = 129658

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 282    acaaacatgatgatatccaa 301
              ||||||||||||||||||||
Sbjct: 111959 acaaacatgatgatatccaa 111978
to top
>gb|AC024938.29| Homo sapiens 3 BAC RP11-485J7 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 63332

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 37    ataataaaatgaaaatcata 56
             ||||||||||||||||||||
Sbjct: 59336 ataataaaatgaaaatcata 59317
to top
>dbj|AB057033.1| Helicobacter pylori cagA gene for cytotoxin associated protein
           CagA, partial cds, 3' region, strain:JapanK101
          Length = 734

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 380 ttttgggagagcgttgtggc 399
           ||||||||||||||||||||
Sbjct: 137 ttttgggagagcgttgtggc 118
to top
>dbj|AB057031.1| Helicobacter pylori cagA gene for cytotoxin associated protein
           CagA, partial cds, 3' region, strain:JapanK89
          Length = 734

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 380 ttttgggagagcgttgtggc 399
           ||||||||||||||||||||
Sbjct: 137 ttttgggagagcgttgtggc 118
to top
>dbj|AB057016.1| Helicobacter pylori cagA gene for cytotoxin associated protein
           CagA, partial cds, 3' region, strain:JapanK41
          Length = 728

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 380 ttttgggagagcgttgtggc 399
           ||||||||||||||||||||
Sbjct: 137 ttttgggagagcgttgtggc 118
to top
>dbj|AB057015.1| Helicobacter pylori cagA gene for cytotoxin associated protein
           CagA, partial cds, 3' region, strain:JapanK35
          Length = 734

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 380 ttttgggagagcgttgtggc 399
           ||||||||||||||||||||
Sbjct: 137 ttttgggagagcgttgtggc 118
to top
>gb|AF269342.1|AF269342 Staphylococcus epidermidis strain SR1 clone step.1002d03 genomic
           sequence
          Length = 3734

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 175 aaaagttgaagaatatgtag 194
           ||||||||||||||||||||
Sbjct: 177 aaaagttgaagaatatgtag 158
to top
>gb|AF269321.1|AF269321 Staphylococcus epidermidis strain SR1 clone step.1002a08 genomic
            sequence
          Length = 3383

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 175  aaaagttgaagaatatgtag 194
            ||||||||||||||||||||
Sbjct: 2238 aaaagttgaagaatatgtag 2257
to top
>gb|AC007467.4|AC007467 Drosophila melanogaster, chromosome 2L, region 38E-38F, BAC clone
             BACR07D17, complete sequence
          Length = 173422

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 39    aataaaatgaaaatcataaa 58
             ||||||||||||||||||||
Sbjct: 27939 aataaaatgaaaatcataaa 27958
to top
>gb|AC153641.3| Mus musculus 6 BAC RP23-5F24 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 193417

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 35    aaataataaaatgaaaatca 54
             ||||||||||||||||||||
Sbjct: 81725 aaataataaaatgaaaatca 81744
to top
>gb|AC018812.5|AC018812 Homo sapiens chromosome 3 clone RP11-161D20 map 3p, complete sequence
          Length = 169199

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 39     aataaaatgaaaatcataaa 58
              ||||||||||||||||||||
Sbjct: 109012 aataaaatgaaaatcataaa 108993
to top
>dbj|AB183825.1| Iris hollandica IhCOMT mRNA for Caffeic acid O-methyltransferase,
           complete cds
          Length = 1303

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 465 gcatctccagtgggtatactctcatacatatctcca 500
           ||||||||| |||| | ||||||| |||||||||||
Sbjct: 788 gcatctccactgggaacactctcaaacatatctcca 753
to top
>gb|AF270232.1|AF270232 Staphylococcus epidermidis strain SR1 clone step.1055e11 genomic
            sequence
          Length = 2995

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 175  aaaagttgaagaatatgtag 194
            ||||||||||||||||||||
Sbjct: 1549 aaaagttgaagaatatgtag 1530
to top
>gb|AC024060.6| Homo sapiens chromosome 3 clone RP11-97C16 map 3p, complete sequence
          Length = 174313

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 39     aataaaatgaaaatcataaa 58
              ||||||||||||||||||||
Sbjct: 161271 aataaaatgaaaatcataaa 161252
to top
>gb|AC067918.1|AC067918 Neurospora crassa chromosome 7, clone G23-F12, complete sequence
          Length = 42412

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 523  gagggaggccttgggcgatg 542
            ||||||||||||||||||||
Sbjct: 5744 gagggaggccttgggcgatg 5763
to top
>emb|BX908788.1| Neurospora crassa DNA linkage group VII BAC clone B23N11
          Length = 46353

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 523   gagggaggccttgggcgatg 542
             ||||||||||||||||||||
Sbjct: 39948 gagggaggccttgggcgatg 39967
to top
>gb|CP000029.1| Staphylococcus epidermidis RP62A, complete genome
          Length = 2616530

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 175    aaaagttgaagaatatgtag 194
              ||||||||||||||||||||
Sbjct: 226670 aaaagttgaagaatatgtag 226689
to top
>emb|BX470164.10| Zebrafish DNA sequence from clone DKEY-24L11 in linkage group 18,
              complete sequence
          Length = 248419

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 211    cggtaaatccagcttgtttg 230
              ||||||||||||||||||||
Sbjct: 147510 cggtaaatccagcttgtttg 147491
to top
>gb|AE003668.5| Drosophila melanogaster chromosome 2L, section 77 of 83 of the complete
             sequence
          Length = 270158

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 39    aataaaatgaaaatcataaa 58
             ||||||||||||||||||||
Sbjct: 17753 aataaaatgaaaatcataaa 17772
to top
>emb|BX255921.2| Zebrafish DNA sequence from clone CH211-236K19 in linkage group 5,
             complete sequence
          Length = 142918

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 35    aaataataaaatgaaaatca 54
             ||||||||||||||||||||
Sbjct: 38783 aaataataaaatgaaaatca 38764
to top
>gb|AC002352.1|AC002352 Homo sapiens 12q24 PAC P256D10 complete sequence
          Length = 162405

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 230   ggctagcctggcaaactcct 249
             ||||||||||||||||||||
Sbjct: 87830 ggctagcctggcaaactcct 87811
to top
>gb|AE015929.1| Staphylococcus epidermidis ATCC 12228, complete genome
          Length = 2499279

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 175    aaaagttgaagaatatgtag 194
              ||||||||||||||||||||
Sbjct: 342005 aaaagttgaagaatatgtag 342024
to top
>dbj|AP005671.2| Homo sapiens genomic DNA, chromosome 18 clone:CTD-3096M3, complete
             sequence
          Length = 86000

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 269   tcccttgaagagcacaaaca 288
             ||||||||||||||||||||
Sbjct: 62557 tcccttgaagagcacaaaca 62538
to top
>gb|AC131584.7| Mus musculus chromosome 1, clone RP23-215C21, complete sequence
          Length = 197346

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 273   ttgaagagcacaaacatgat 292
             ||||||||||||||||||||
Sbjct: 79901 ttgaagagcacaaacatgat 79882
to top
>gb|AC004759.1|AC004759 Drosophila melanogaster DNA sequence (P1s DS04217 (D56) and DS00582
             (D85)), complete sequence
          Length = 142799

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 39    aataaaatgaaaatcataaa 58
             ||||||||||||||||||||
Sbjct: 61596 aataaaatgaaaatcataaa 61577
to top
>emb|CR385047.19| Zebrafish DNA sequence from clone DKEY-221N16 in linkage group 18,
              complete sequence
          Length = 193827

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 211    cggtaaatccagcttgtttg 230
              ||||||||||||||||||||
Sbjct: 173244 cggtaaatccagcttgtttg 173225
to top
>gb|AC022002.5| Homo sapiens chromosome 3 clone RP11-198P17 map 3p, complete sequence
          Length = 189097

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 39     aataaaatgaaaatcataaa 58
              ||||||||||||||||||||
Sbjct: 185081 aataaaatgaaaatcataaa 185100
to top
>gb|AC166321.3| Cavia porcellus, clone Cavia porcellus-24949357D4, complete sequence
          Length = 36966

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 36   aataataaaatgaaaatcat 55
            ||||||||||||||||||||
Sbjct: 3622 aataataaaatgaaaatcat 3641
to top
>emb|AL691509.6| Mouse DNA sequence from clone RP23-222A18 on chromosome 4, complete
            sequence
          Length = 217607

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 35   aaataataaaatgaaaatcataaa 58
            ||||||||||||||||||| ||||
Sbjct: 7170 aaataataaaatgaaaatcttaaa 7193


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,728,833
Number of Sequences: 3902068
Number of extensions: 4728833
Number of successful extensions: 95984
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 95695
Number of HSP's gapped (non-prelim): 285
length of query: 589
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 566
effective length of database: 17,143,297,704
effective search space: 9703106500464
effective search space used: 9703106500464
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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