| Clone Name | rbags12h13 |
|---|---|
| Clone Library Name | barley_pub |
>ENGD_BACSU (P37518) GTP-dependent nucleic acid-binding protein engD| Length = 366 Score = 37.7 bits (86), Expect = 0.007 Identities = 16/23 (69%), Positives = 20/23 (86%) Frame = -3 Query: 249 QMRLEGKEYIVQEGDVXXCRFNV 181 ++RLEGKEY+VQ+GDV RFNV Sbjct: 344 KVRLEGKEYVVQDGDVIHFRFNV 366
>ENGD_PASMU (Q9CP90) GTP-dependent nucleic acid-binding protein engD| Length = 362 Score = 36.2 bits (82), Expect = 0.022 Identities = 16/21 (76%), Positives = 18/21 (85%) Frame = -3 Query: 243 RLEGKEYIVQEGDVXXCRFNV 181 RLEGK+YIVQ+GDV RFNV Sbjct: 342 RLEGKDYIVQDGDVMHFRFNV 362
>ENGD_HAEIN (P44681) GTP-dependent nucleic acid-binding protein engD| Length = 362 Score = 36.2 bits (82), Expect = 0.022 Identities = 16/21 (76%), Positives = 18/21 (85%) Frame = -3 Query: 243 RLEGKEYIVQEGDVXXCRFNV 181 RLEGK+YIVQ+GDV RFNV Sbjct: 342 RLEGKDYIVQDGDVMHFRFNV 362
>ENGD_HAEDU (Q7VMI2) GTP-dependent nucleic acid-binding protein engD| Length = 362 Score = 36.2 bits (82), Expect = 0.022 Identities = 16/21 (76%), Positives = 18/21 (85%) Frame = -3 Query: 243 RLEGKEYIVQEGDVXXCRFNV 181 RLEGK+YIVQ+GDV RFNV Sbjct: 342 RLEGKDYIVQDGDVMHFRFNV 362
>ENGD_SHIFL (P0ABU4) GTP-dependent nucleic acid-binding protein engD| Length = 362 Score = 32.3 bits (72), Expect = 0.31 Identities = 14/23 (60%), Positives = 18/23 (78%) Frame = -3 Query: 249 QMRLEGKEYIVQEGDVXXCRFNV 181 +MR EGK+YIV++GDV FNV Sbjct: 340 KMRAEGKDYIVKDGDVMNFLFNV 362
>ENGD_ECOLI (P0ABU2) GTP-dependent nucleic acid-binding protein engD| Length = 362 Score = 32.3 bits (72), Expect = 0.31 Identities = 14/23 (60%), Positives = 18/23 (78%) Frame = -3 Query: 249 QMRLEGKEYIVQEGDVXXCRFNV 181 +MR EGK+YIV++GDV FNV Sbjct: 340 KMRAEGKDYIVKDGDVMNFLFNV 362
>ENGD_ECO57 (P0ABU3) GTP-dependent nucleic acid-binding protein engD| Length = 362 Score = 32.3 bits (72), Expect = 0.31 Identities = 14/23 (60%), Positives = 18/23 (78%) Frame = -3 Query: 249 QMRLEGKEYIVQEGDVXXCRFNV 181 +MR EGK+YIV++GDV FNV Sbjct: 340 KMRAEGKDYIVKDGDVMNFLFNV 362
>Y024_MYCGE (P47270) Probable GTP-binding protein MG024| Length = 367 Score = 31.6 bits (70), Expect = 0.54 Identities = 12/22 (54%), Positives = 18/22 (81%) Frame = -3 Query: 246 MRLEGKEYIVQEGDVXXCRFNV 181 +RLEGK Y++++GDV +FNV Sbjct: 345 IRLEGKNYLIKDGDVCNFKFNV 366
>PLK1_CAEEL (P34331) Serine/threonine-protein kinase plk-1 (EC 2.7.11.21)| (Polo-like kinase 1) Length = 649 Score = 29.3 bits (64), Expect = 2.7 Identities = 13/34 (38%), Positives = 19/34 (55%) Frame = -2 Query: 268 PALPVTADEVGREGIYCAGRRCXXLPIQCVTTVP 167 P TA +V R+G + +G LP+ C+T VP Sbjct: 275 PTRRPTAKQVQRDGFFKSGFMPTRLPVSCLTMVP 308
>ENGD_BUCAI (P57288) GTP-dependent nucleic acid-binding protein engD| Length = 361 Score = 29.3 bits (64), Expect = 2.7 Identities = 11/23 (47%), Positives = 16/23 (69%) Frame = -3 Query: 249 QMRLEGKEYIVQEGDVXXCRFNV 181 + R EGK+Y +Q+GD+ FNV Sbjct: 339 KFRTEGKQYYIQDGDIIHFLFNV 361
>YCHF_CAEEL (P91917) Putative GTP-binding protein W08E3.3| Length = 395 Score = 28.9 bits (63), Expect = 3.5 Identities = 12/20 (60%), Positives = 15/20 (75%) Frame = -3 Query: 243 RLEGKEYIVQEGDVXXCRFN 184 R +GK YIVQ+GDV +FN Sbjct: 366 RQQGKTYIVQDGDVIFFKFN 385
>ENGD_BUCBP (Q89AR6) GTP-dependent nucleic acid-binding protein engD| Length = 362 Score = 27.7 bits (60), Expect = 7.7 Identities = 9/23 (39%), Positives = 17/23 (73%) Frame = -3 Query: 249 QMRLEGKEYIVQEGDVXXCRFNV 181 ++R+EGK Y++ +GD+ +NV Sbjct: 340 KIRIEGKRYVICDGDIIHVLYNV 362 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 35,376,682 Number of Sequences: 219361 Number of extensions: 498433 Number of successful extensions: 1100 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 1066 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1100 length of database: 80,573,946 effective HSP length: 75 effective length of database: 64,121,871 effective search space used: 1538924904 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)