ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags12h10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_476904.1| Oryza sativa (japonica cultivar-group), mRNA 103 7e-19
2dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 103 7e-19
3dbj|AP003861.2| Oryza sativa (japonica cultivar-group) genomic D... 103 7e-19
4dbj|AP003753.3| Oryza sativa (japonica cultivar-group) genomic D... 103 7e-19
5dbj|AK066157.1| Oryza sativa (japonica cultivar-group) cDNA clon... 103 7e-19
6gb|BT024104.1| Zea mays clone EL01N0520G08 mRNA sequence 98 4e-17
7gb|AY105898.1| Zea mays PCO133189 mRNA sequence 90 1e-14
8dbj|AK060743.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 2e-06
9gb|AC113547.27| Mus musculus chromosome 12, clone RP23-263J2, co... 42 2.2
10emb|AJ310150.1|LUS310150 Linum usitatissimum Ngc-D, Ngc-A and Ng... 42 2.2
11gb|AY377856.1| Brassica napus TOC33 (Toc33) gene, complete cds; ... 42 2.2
12dbj|AK082156.1| Mus musculus 0 day neonate cerebellum cDNA, RIKE... 42 2.2
13emb|CT030030.12| Mouse DNA sequence from clone RP23-123J19 on ch... 42 2.2
14gb|AY657927.1| Synthetic construct Peudomonas aeruginosa clone F... 40 8.6
15ref|XM_539971.2| PREDICTED: Canis familiaris similar to potassiu... 40 8.6
16gb|AC091768.4| Homo sapiens BAC clone RP11-703N5 from 7, complet... 40 8.6
17gb|AC023315.4| Homo sapiens chromosome 17, clone RP11-333J10, co... 40 8.6
18dbj|AK085236.1| Mus musculus 13 days embryo stomach cDNA, RIKEN ... 40 8.6
19dbj|AK085224.1| Mus musculus 13 days embryo stomach cDNA, RIKEN ... 40 8.6
20dbj|AK081351.1| Mus musculus 16 days embryo head cDNA, RIKEN ful... 40 8.6
21gb|AF283254.1|AF283254 Mus musculus gap junction protein connexi... 40 8.6
22gb|AE004743.1| Pseudomonas aeruginosa PAO1, section 304 of 529 o... 40 8.6
23gb|AC154353.1| Mus musculus BAC clone RP24-547N14 from chromosom... 40 8.6
24emb|BX255894.19| Zebrafish DNA sequence from clone CH211-251G8 i... 40 8.6
25emb|AL929067.8| Mouse DNA sequence from clone RP24-69A20 on chro... 40 8.6
26emb|AL831778.8| Mouse DNA sequence from clone RP23-261L23 on chr... 40 8.6
27emb|AJ300716.1|MMU300716 Mus musculus Cx45 gene for connexin 45,... 40 8.6 
>ref|XM_476904.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1565

 Score =  103 bits (52), Expect = 7e-19
 Identities = 164/200 (82%), Gaps = 1/200 (0%)
 Strand = Plus / Minus

                                                                       
Query: 414 gaaccagcaatgcatgtcttggtggtcacccgagccatgatggcactgtgtgacagtatg 473
           |||| ||||||  ||||||||||||| || |||||||||||||||||| | || ||  ||
Sbjct: 994 gaactagcaatagatgtcttggtggttactcgagccatgatggcactgcgagagagggtg 935

                                                                       
Query: 474 tgttctgattttctcattagctgatatgctctaaagccgggactgcagctttttaacagc 533
           |  ||||  | ||||||| |||| ||||||||||| |||| |||| | ||| || |||||
Sbjct: 934 ttctctgtgtctctcatttgctggtatgctctaaatccgg-actggaacttctttacagc 876

                                                                       
Query: 534 accccacatgccgtggcggacaccaactttagcaacatccttcggtatgcccatgtcctc 593
           |||||||||||| || |||||||| || || || ||||| || || ||||||||||||||
Sbjct: 875 accccacatgccatgccggacacccaccttggcgacatctttagggatgcccatgtcctc 816

                               
Query: 594 atagtgaaacagagttactt 613
            ||||| | ||| |||||||
Sbjct: 815 gtagtggaccagcgttactt 796



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 96/115 (83%), Gaps = 3/115 (2%)
 Strand = Plus / Minus

                                                                        
Query: 216  cacttctttgcctgccttcttg---cagctccaagtaagagggccttccctacaattccg 272
            |||||||| |||||||||||||   ||||||| |  | ||| |||||||| ||||  || 
Sbjct: 1195 cacttcttcgcctgccttcttgatgcagctccgatgaggagagccttcccaacaagccca 1136

                                                                   
Query: 273  gtgttaagcacgcagactgcagccactgtgctaccgaccaccacccacttccagt 327
            ||||| ||||||||||| |||||||||| || ||||| ||||||||| |||||||
Sbjct: 1135 gtgttgagcacgcagacggcagccactgcgccaccgaacaccacccatttccagt 1081
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score =  103 bits (52), Expect = 7e-19
 Identities = 164/200 (82%), Gaps = 1/200 (0%)
 Strand = Plus / Plus

                                                                           
Query: 414     gaaccagcaatgcatgtcttggtggtcacccgagccatgatggcactgtgtgacagtatg 473
               |||| ||||||  ||||||||||||| || |||||||||||||||||| | || ||  ||
Sbjct: 4536094 gaactagcaatagatgtcttggtggttactcgagccatgatggcactgcgagagagggtg 4536153

                                                                           
Query: 474     tgttctgattttctcattagctgatatgctctaaagccgggactgcagctttttaacagc 533
               |  ||||  | ||||||| |||| ||||||||||| |||| |||| | ||| || |||||
Sbjct: 4536154 ttctctgtgtctctcatttgctggtatgctctaaatccgg-actggaacttctttacagc 4536212

                                                                           
Query: 534     accccacatgccgtggcggacaccaactttagcaacatccttcggtatgcccatgtcctc 593
               |||||||||||| || |||||||| || || || ||||| || || ||||||||||||||
Sbjct: 4536213 accccacatgccatgccggacacccaccttggcgacatctttagggatgcccatgtcctc 4536272

                                   
Query: 594     atagtgaaacagagttactt 613
                ||||| | ||| |||||||
Sbjct: 4536273 gtagtggaccagcgttactt 4536292



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 96/115 (83%), Gaps = 3/115 (2%)
 Strand = Plus / Plus

                                                                           
Query: 216     cacttctttgcctgccttcttg---cagctccaagtaagagggccttccctacaattccg 272
               |||||||| |||||||||||||   ||||||| |  | ||| |||||||| ||||  || 
Sbjct: 4535893 cacttcttcgcctgccttcttgatgcagctccgatgaggagagccttcccaacaagccca 4535952

                                                                      
Query: 273     gtgttaagcacgcagactgcagccactgtgctaccgaccaccacccacttccagt 327
               ||||| ||||||||||| |||||||||| || ||||| ||||||||| |||||||
Sbjct: 4535953 gtgttgagcacgcagacggcagccactgcgccaccgaacaccacccatttccagt 4536007
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>dbj|AP003861.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1046_F10
          Length = 118472

 Score =  103 bits (52), Expect = 7e-19
 Identities = 164/200 (82%), Gaps = 1/200 (0%)
 Strand = Plus / Plus

                                                                          
Query: 414    gaaccagcaatgcatgtcttggtggtcacccgagccatgatggcactgtgtgacagtatg 473
              |||| ||||||  ||||||||||||| || |||||||||||||||||| | || ||  ||
Sbjct: 114813 gaactagcaatagatgtcttggtggttactcgagccatgatggcactgcgagagagggtg 114872

                                                                          
Query: 474    tgttctgattttctcattagctgatatgctctaaagccgggactgcagctttttaacagc 533
              |  ||||  | ||||||| |||| ||||||||||| |||| |||| | ||| || |||||
Sbjct: 114873 ttctctgtgtctctcatttgctggtatgctctaaatccgg-actggaacttctttacagc 114931

                                                                          
Query: 534    accccacatgccgtggcggacaccaactttagcaacatccttcggtatgcccatgtcctc 593
              |||||||||||| || |||||||| || || || ||||| || || ||||||||||||||
Sbjct: 114932 accccacatgccatgccggacacccaccttggcgacatctttagggatgcccatgtcctc 114991

                                  
Query: 594    atagtgaaacagagttactt 613
               ||||| | ||| |||||||
Sbjct: 114992 gtagtggaccagcgttactt 115011



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 96/115 (83%), Gaps = 3/115 (2%)
 Strand = Plus / Plus

                                                                          
Query: 216    cacttctttgcctgccttcttg---cagctccaagtaagagggccttccctacaattccg 272
              |||||||| |||||||||||||   ||||||| |  | ||| |||||||| ||||  || 
Sbjct: 114612 cacttcttcgcctgccttcttgatgcagctccgatgaggagagccttcccaacaagccca 114671

                                                                     
Query: 273    gtgttaagcacgcagactgcagccactgtgctaccgaccaccacccacttccagt 327
              ||||| ||||||||||| |||||||||| || ||||| ||||||||| |||||||
Sbjct: 114672 gtgttgagcacgcagacggcagccactgcgccaccgaacaccacccatttccagt 114726
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>dbj|AP003753.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
            clone:OJ1339_B08
          Length = 119212

 Score =  103 bits (52), Expect = 7e-19
 Identities = 164/200 (82%), Gaps = 1/200 (0%)
 Strand = Plus / Plus

                                                                        
Query: 414  gaaccagcaatgcatgtcttggtggtcacccgagccatgatggcactgtgtgacagtatg 473
            |||| ||||||  ||||||||||||| || |||||||||||||||||| | || ||  ||
Sbjct: 1434 gaactagcaatagatgtcttggtggttactcgagccatgatggcactgcgagagagggtg 1493

                                                                        
Query: 474  tgttctgattttctcattagctgatatgctctaaagccgggactgcagctttttaacagc 533
            |  ||||  | ||||||| |||| ||||||||||| |||| |||| | ||| || |||||
Sbjct: 1494 ttctctgtgtctctcatttgctggtatgctctaaatccgg-actggaacttctttacagc 1552

                                                                        
Query: 534  accccacatgccgtggcggacaccaactttagcaacatccttcggtatgcccatgtcctc 593
            |||||||||||| || |||||||| || || || ||||| || || ||||||||||||||
Sbjct: 1553 accccacatgccatgccggacacccaccttggcgacatctttagggatgcccatgtcctc 1612

                                
Query: 594  atagtgaaacagagttactt 613
             ||||| | ||| |||||||
Sbjct: 1613 gtagtggaccagcgttactt 1632



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 96/115 (83%), Gaps = 3/115 (2%)
 Strand = Plus / Plus

                                                                        
Query: 216  cacttctttgcctgccttcttg---cagctccaagtaagagggccttccctacaattccg 272
            |||||||| |||||||||||||   ||||||| |  | ||| |||||||| ||||  || 
Sbjct: 1233 cacttcttcgcctgccttcttgatgcagctccgatgaggagagccttcccaacaagccca 1292

                                                                   
Query: 273  gtgttaagcacgcagactgcagccactgtgctaccgaccaccacccacttccagt 327
            ||||| ||||||||||| |||||||||| || ||||| ||||||||| |||||||
Sbjct: 1293 gtgttgagcacgcagacggcagccactgcgccaccgaacaccacccatttccagt 1347
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>dbj|AK066157.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013059B01, full
            insert sequence
          Length = 1650

 Score =  103 bits (52), Expect = 7e-19
 Identities = 164/200 (82%), Gaps = 1/200 (0%)
 Strand = Plus / Minus

                                                                        
Query: 414  gaaccagcaatgcatgtcttggtggtcacccgagccatgatggcactgtgtgacagtatg 473
            |||| ||||||  ||||||||||||| || |||||||||||||||||| | || ||  ||
Sbjct: 1079 gaactagcaatagatgtcttggtggttactcgagccatgatggcactgcgagagagggtg 1020

                                                                        
Query: 474  tgttctgattttctcattagctgatatgctctaaagccgggactgcagctttttaacagc 533
            |  ||||  | ||||||| |||| ||||||||||| |||| |||| | ||| || |||||
Sbjct: 1019 ttctctgtgtctctcatttgctggtatgctctaaatccgg-actggaacttctttacagc 961

                                                                        
Query: 534  accccacatgccgtggcggacaccaactttagcaacatccttcggtatgcccatgtcctc 593
            |||||||||||| || |||||||| || || || ||||| || || ||||||||||||||
Sbjct: 960  accccacatgccatgccggacacccaccttggcgacatctttagggatgcccatgtcctc 901

                                
Query: 594  atagtgaaacagagttactt 613
             ||||| | ||| |||||||
Sbjct: 900  gtagtggaccagcgttactt 881



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 96/115 (83%), Gaps = 3/115 (2%)
 Strand = Plus / Minus

                                                                        
Query: 216  cacttctttgcctgccttcttg---cagctccaagtaagagggccttccctacaattccg 272
            |||||||| |||||||||||||   ||||||| |  | ||| |||||||| ||||  || 
Sbjct: 1280 cacttcttcgcctgccttcttgatgcagctccgatgaggagagccttcccaacaagccca 1221

                                                                   
Query: 273  gtgttaagcacgcagactgcagccactgtgctaccgaccaccacccacttccagt 327
            ||||| ||||||||||| |||||||||| || ||||| ||||||||| |||||||
Sbjct: 1220 gtgttgagcacgcagacggcagccactgcgccaccgaacaccacccatttccagt 1166
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>gb|BT024104.1| Zea mays clone EL01N0520G08 mRNA sequence
          Length = 1769

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 149/181 (82%), Gaps = 1/181 (0%)
 Strand = Plus / Minus

                                                                        
Query: 433  tggtggtcacccgagccatgatggcactgtgtgacagtatgtgttctgattttctcatta 492
            |||||||||  |||||||| ||||| |||||||||||  | | |||||  | ||||||| 
Sbjct: 1225 tggtggtcattcgagccataatggcgctgtgtgacagggtattttctgtgtctctcattt 1166

                                                                        
Query: 493  gctgatatgctctaaagccgggactgcagctttttaacagcaccccacatgccgtggcgg 552
            |||| || ||||| || || | |||| || || || ||||||||||||||||||||||| 
Sbjct: 1165 gctggtacgctctgaacccag-actgaagtttcttcacagcaccccacatgccgtggcga 1107

                                                                        
Query: 553  acaccaactttagcaacatccttcggtatgcccatgtcctcatagtgaaacagagttact 612
            ||| ||||  | || ||||| || ||||||||||||||||||||||||| || |||||||
Sbjct: 1106 acagcaaccctggctacatcttttggtatgcccatgtcctcatagtgaaccaaagttact 1047

             
Query: 613  t 613
            |
Sbjct: 1046 t 1046



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 93/112 (83%)
 Strand = Plus / Minus

                                                                        
Query: 216  cacttctttgcctgccttcttgcagctccaagtaagagggccttccctacaattccggtg 275
            |||||||||||||||||||| || |||||||| || ||| |||| ||||| | |||||||
Sbjct: 1442 cacttctttgcctgccttctcgctgctccaagcaacaggaccttgcctaccaatccggtg 1383

                                                                
Query: 276  ttaagcacgcagactgcagccactgtgctaccgaccaccacccacttccagt 327
            || ||||| || || |||||||| |  | ||| | ||||||||| |||||||
Sbjct: 1382 ttgagcacacaaaccgcagccaccgcaccaccaaacaccacccatttccagt 1331
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>gb|AY105898.1| Zea mays PCO133189 mRNA sequence
          Length = 681

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 148/181 (81%), Gaps = 1/181 (0%)
 Strand = Plus / Minus

                                                                       
Query: 433 tggtggtcacccgagccatgatggcactgtgtgacagtatgtgttctgattttctcatta 492
           |||||||||  |||||||| ||||| |||||||||||  | | |||||  | ||||||| 
Sbjct: 671 tggtggtcattcgagccataatggcgctgtgtgacagggtattttctgtgtctctcattt 612

                                                                       
Query: 493 gctgatatgctctaaagccgggactgcagctttttaacagcaccccacatgccgtggcgg 552
           |||| || ||||| || || | |||| || || || ||||||||||||||||||||||| 
Sbjct: 611 gctggtacgctctgaacccag-actgaagtttcttcacagcaccccacatgccgtggcga 553

                                                                       
Query: 553 acaccaactttagcaacatccttcggtatgcccatgtcctcatagtgaaacagagttact 612
           | | ||||  | || ||||| || ||||||||||||||||||||||||| || |||||||
Sbjct: 552 atagcaaccctggctacatcttttggtatgcccatgtcctcatagtgaaccaaagttact 493

            
Query: 613 t 613
           |
Sbjct: 492 t 492
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>dbj|AK060743.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-E03, full
            insert sequence
          Length = 1838

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 61/71 (85%)
 Strand = Plus / Minus

                                                                        
Query: 529  acagcaccccacatgccgtggcggacaccaactttagcaacatccttcggtatgcccatg 588
            ||||||||||||||||| || |||||||| || || || ||||| || || |||||||||
Sbjct: 1459 acagcaccccacatgccatgccggacacccaccttggcgacatctttagggatgcccatg 1400

                       
Query: 589  tcctcatagtg 599
            ||||| |||||
Sbjct: 1399 tcctcgtagtg 1389
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>gb|AC113547.27| Mus musculus chromosome 12, clone RP23-263J2, complete sequence
          Length = 197242

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 218    cttctttgcctgccttcttgc 238
              |||||||||||||||||||||
Sbjct: 186161 cttctttgcctgccttcttgc 186141
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>emb|AJ310150.1|LUS310150 Linum usitatissimum Ngc-D, Ngc-A and Ngc-B genes, cultivar Bombay
          Length = 25054

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 136   ggtctcgattgcaactttcta 156
             |||||||||||||||||||||
Sbjct: 19938 ggtctcgattgcaactttcta 19958
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>gb|AY377856.1| Brassica napus TOC33 (Toc33) gene, complete cds; nuclear gene for
            chloroplast product
          Length = 1376

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 396  tgatccaaggagccatcagaa 416
            |||||||||||||||||||||
Sbjct: 1324 tgatccaaggagccatcagaa 1344
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>dbj|AK082156.1| Mus musculus 0 day neonate cerebellum cDNA, RIKEN full-length
            enriched library, clone:C230015M18 product:hypothetical
            protein, full insert sequence
          Length = 4401

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 218  cttctttgcctgccttcttgc 238
            |||||||||||||||||||||
Sbjct: 1203 cttctttgcctgccttcttgc 1183
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>emb|CT030030.12| Mouse DNA sequence from clone RP23-123J19 on chromosome 12, complete
             sequence
          Length = 201738

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 218   cttctttgcctgccttcttgc 238
             |||||||||||||||||||||
Sbjct: 19840 cttctttgcctgccttcttgc 19820
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>gb|AY657927.1| Synthetic construct Peudomonas aeruginosa clone FLH046013.01F
           PA3196 gene, partial cds
          Length = 531

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 302 gctaccgaccaccacccact 321
           ||||||||||||||||||||
Sbjct: 192 gctaccgaccaccacccact 173
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>ref|XM_539971.2| PREDICTED: Canis familiaris similar to potassium large conductance
            pH-sensitive channel, subfamily M, alpha member 3
            (LOC482856), mRNA
          Length = 4041

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 405  gagccatcagaaccagcaat 424
            ||||||||||||||||||||
Sbjct: 1235 gagccatcagaaccagcaat 1254
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>gb|AC091768.4| Homo sapiens BAC clone RP11-703N5 from 7, complete sequence
          Length = 104955

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 460   tgtgtgacagtatgtgttctgattttct 487
             ||||| |||||||||||| |||||||||
Sbjct: 71418 tgtgtaacagtatgtgttatgattttct 71391
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>gb|AC023315.4| Homo sapiens chromosome 17, clone RP11-333J10, complete sequence
          Length = 135692

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 111   ggtatgaatctcattccttt 130
             ||||||||||||||||||||
Sbjct: 69375 ggtatgaatctcattccttt 69356
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>dbj|AK085236.1| Mus musculus 13 days embryo stomach cDNA, RIKEN full-length
           enriched library, clone:D530032L01
           product:unclassifiable, full insert sequence
          Length = 3200

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 224 tgcctgccttcttgcagctc 243
           ||||||||||||||||||||
Sbjct: 150 tgcctgccttcttgcagctc 131
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>dbj|AK085224.1| Mus musculus 13 days embryo stomach cDNA, RIKEN full-length
           enriched library, clone:D530024I09
           product:unclassifiable, full insert sequence
          Length = 3199

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 224 tgcctgccttcttgcagctc 243
           ||||||||||||||||||||
Sbjct: 150 tgcctgccttcttgcagctc 131
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>dbj|AK081351.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched
           library, clone:C130009G16 product:gap junction membrane
           channel protein alpha 7, full insert sequence
          Length = 3412

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 224 tgcctgccttcttgcagctc 243
           ||||||||||||||||||||
Sbjct: 919 tgcctgccttcttgcagctc 900
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>gb|AF283254.1|AF283254 Mus musculus gap junction protein connexin45 (Gja6) gene, partial
           cds
          Length = 4591

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 224 tgcctgccttcttgcagctc 243
           ||||||||||||||||||||
Sbjct: 617 tgcctgccttcttgcagctc 598
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>gb|AE004743.1| Pseudomonas aeruginosa PAO1, section 304 of 529 of the complete
            genome
          Length = 10146

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 302  gctaccgaccaccacccact 321
            ||||||||||||||||||||
Sbjct: 8777 gctaccgaccaccacccact 8796
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>gb|AC154353.1| Mus musculus BAC clone RP24-547N14 from chromosome 12, complete
             sequence
          Length = 249825

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 481   attttctcattagctgatat 500
             ||||||||||||||||||||
Sbjct: 25257 attttctcattagctgatat 25238
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>emb|BX255894.19| Zebrafish DNA sequence from clone CH211-251G8 in linkage group 19,
              complete sequence
          Length = 180950

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 320    cttccagttgaaaccatgtt 339
              ||||||||||||||||||||
Sbjct: 170004 cttccagttgaaaccatgtt 170023
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>emb|AL929067.8| Mouse DNA sequence from clone RP24-69A20 on chromosome 11, complete
             sequence
          Length = 87925

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 224   tgcctgccttcttgcagctc 243
             ||||||||||||||||||||
Sbjct: 61724 tgcctgccttcttgcagctc 61743
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>emb|AL831778.8| Mouse DNA sequence from clone RP23-261L23 on chromosome 4, complete
              sequence
          Length = 213495

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 479    tgattttctcattagctgat 498
              ||||||||||||||||||||
Sbjct: 146473 tgattttctcattagctgat 146492
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>emb|AJ300716.1|MMU300716 Mus musculus Cx45 gene for connexin 45, exons 1-3
          Length = 8415

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 224 tgcctgccttcttgcagctc 243
           ||||||||||||||||||||
Sbjct: 923 tgcctgccttcttgcagctc 904


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,734,552
Number of Sequences: 3902068
Number of extensions: 4734552
Number of successful extensions: 79126
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 79049
Number of HSP's gapped (non-prelim): 66
length of query: 633
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 610
effective length of database: 17,143,297,704
effective search space: 10457411599440
effective search space used: 10457411599440
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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