ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags12g15 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY108625.1| Zea mays PCO087393 mRNA sequence Length = 966 Score = 147 bits (74), Expect = 4e-32 Identities = 158/186 (84%) Strand = Plus / Minus Query: 327 cacgacctcccagccaggccctttcagggggaagtgcgggacggcatcagcagccgcacg 386 |||||||||||||||||| |||||||| |||| | || ||||||| ||||| || | Sbjct: 481 cacgacctcccagccagggcctttcagcgggatcagtggagcggcatcggcagcaccagg 422 Query: 387 cgcaccggtgaggtccctccggtccatcaccttcaggaggtcctcgtcgctgatgtctgt 446 | |||| ||||| ||||||||||||| ||||| |||||| |||||||||||||| || Sbjct: 421 tggtccggacaggtcgctccggtccatcagcttcaagaggtcttcgtcgctgatgtcggt 362 Query: 447 ctggatcatcctgtcttcctcgtcctgctcgtccctcagaagcgccagcagctctccctc 506 ||||||||||| ||||||||||||||||||||||| || |||||||||||||| ||||| Sbjct: 361 ctggatcatccgatcttcctcgtcctgctcgtccctaagcagcgccagcagctccccctc 302 Query: 507 atctaa 512 ||||| Sbjct: 301 ctctaa 296 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 283 gctcagctggtgagcgtcgagagcatgccgcc 314 |||||||||||||||| ||||||||| ||||| Sbjct: 531 gctcagctggtgagcgacgagagcataccgcc 500
>gb|AC146936.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone B1154F06 map near C10769, complete sequence Length = 194856 Score = 135 bits (68), Expect = 2e-28 Identities = 92/100 (92%) Strand = Plus / Plus Query: 397 aggtccctccggtccatcaccttcaggaggtcctcgtcgctgatgtctgtctggatcatc 456 ||||| ||||||||||||||||||||||| ||||||||| ||||||| |||||||||||| Sbjct: 121720 aggtcgctccggtccatcaccttcaggagatcctcgtcggtgatgtccgtctggatcatc 121779 Query: 457 ctgtcttcctcgtcctgctcgtccctcagaagcgccagca 496 | ||| |||||||||||||||||||| || |||||||||| Sbjct: 121780 cggtcctcctcgtcctgctcgtccctgagcagcgccagca 121819 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Plus Query: 287 agctggtgagcgtcgagagcatgccgccgcc 317 |||||||||||| || ||||||||||||||| Sbjct: 121604 agctggtgagcgacgtgagcatgccgccgcc 121634
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 135 bits (68), Expect = 2e-28 Identities = 92/100 (92%) Strand = Plus / Minus Query: 397 aggtccctccggtccatcaccttcaggaggtcctcgtcgctgatgtctgtctggatcatc 456 ||||| ||||||||||||||||||||||| ||||||||| ||||||| |||||||||||| Sbjct: 29017571 aggtcgctccggtccatcaccttcaggagatcctcgtcggtgatgtccgtctggatcatc 29017512 Query: 457 ctgtcttcctcgtcctgctcgtccctcagaagcgccagca 496 | ||| |||||||||||||||||||| || |||||||||| Sbjct: 29017511 cggtcctcctcgtcctgctcgtccctgagcagcgccagca 29017472 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Minus Query: 287 agctggtgagcgtcgagagcatgccgccgcc 317 |||||||||||| || ||||||||||||||| Sbjct: 29017687 agctggtgagcgacgtgagcatgccgccgcc 29017657
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 135 bits (68), Expect = 2e-28 Identities = 92/100 (92%) Strand = Plus / Minus Query: 397 aggtccctccggtccatcaccttcaggaggtcctcgtcgctgatgtctgtctggatcatc 456 ||||| ||||||||||||||||||||||| ||||||||| ||||||| |||||||||||| Sbjct: 29108993 aggtcgctccggtccatcaccttcaggagatcctcgtcggtgatgtccgtctggatcatc 29108934 Query: 457 ctgtcttcctcgtcctgctcgtccctcagaagcgccagca 496 | ||| |||||||||||||||||||| || |||||||||| Sbjct: 29108933 cggtcctcctcgtcctgctcgtccctgagcagcgccagca 29108894 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Minus Query: 287 agctggtgagcgtcgagagcatgccgccgcc 317 |||||||||||| || ||||||||||||||| Sbjct: 29109109 agctggtgagcgacgtgagcatgccgccgcc 29109079
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 127 bits (64), Expect = 4e-26 Identities = 91/100 (91%) Strand = Plus / Plus Query: 397 aggtccctccggtccatcaccttcaggaggtcctcgtcgctgatgtctgtctggatcatc 456 ||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 16407442 aggtcgctccggtccatcaccttcaggaggtcctcatcgctgatgtccgtctggatcatc 16407501 Query: 457 ctgtcttcctcgtcctgctcgtccctcagaagcgccagca 496 | ||| || ||| ||||||||||||| || |||||||||| Sbjct: 16407502 cggtcctcgtcgccctgctcgtccctgagcagcgccagca 16407541
>dbj|AP005419.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0046G12 Length = 189391 Score = 127 bits (64), Expect = 4e-26 Identities = 91/100 (91%) Strand = Plus / Plus Query: 397 aggtccctccggtccatcaccttcaggaggtcctcgtcgctgatgtctgtctggatcatc 456 ||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 95989 aggtcgctccggtccatcaccttcaggaggtcctcatcgctgatgtccgtctggatcatc 96048 Query: 457 ctgtcttcctcgtcctgctcgtccctcagaagcgccagca 496 | ||| || ||| ||||||||||||| || |||||||||| Sbjct: 96049 cggtcctcgtcgccctgctcgtccctgagcagcgccagca 96088
>gb|AY503339.1| Sorghum bicolor clone 0446-SC0706 RFLP probe pSB0446 Length = 401 Score = 123 bits (62), Expect = 6e-25 Identities = 98/110 (89%) Strand = Plus / Minus Query: 397 aggtccctccggtccatcaccttcaggaggtcctcgtcgctgatgtctgtctggatcatc 456 ||||| || |||||||||| ||||| |||||| || ||||||||||| |||||||||||| Sbjct: 281 aggtcgctgcggtccatcagcttcaagaggtcttcatcgctgatgtcggtctggatcatc 222 Query: 457 ctgtcttcctcgtcctgctcgtccctcagaagcgccagcagctctccctc 506 | |||||| ||||||||||||||||| || |||||||||||||| ||||| Sbjct: 221 cggtcttcttcgtcctgctcgtccctaagcagcgccagcagctccccctc 172 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 283 gctcagctggtgagcgtcgagagcatgccgcc 314 |||||||||||||||| ||||||||| ||||| Sbjct: 401 gctcagctggtgagcgacgagagcataccgcc 370 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 327 cacgacctcccagccaggccctttcaggggga 358 |||||||||||||||||| |||||||| |||| Sbjct: 351 cacgacctcccagccaggacctttcagcggga 320
>gb|AY503338.1| Sorghum bicolor clone 0446-SC0599 RFLP probe pSB0446 Length = 401 Score = 123 bits (62), Expect = 6e-25 Identities = 98/110 (89%) Strand = Plus / Minus Query: 397 aggtccctccggtccatcaccttcaggaggtcctcgtcgctgatgtctgtctggatcatc 456 ||||| || |||||||||| ||||| |||||| || ||||||||||| |||||||||||| Sbjct: 281 aggtcgctgcggtccatcagcttcaagaggtcttcatcgctgatgtcggtctggatcatc 222 Query: 457 ctgtcttcctcgtcctgctcgtccctcagaagcgccagcagctctccctc 506 | |||||| ||||||||||||||||| || |||||||||||||| ||||| Sbjct: 221 cggtcttcttcgtcctgctcgtccctaagcagcgccagcagctccccctc 172 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 283 gctcagctggtgagcgtcgagagcatgccgcc 314 |||||||||||||||| ||||||||| ||||| Sbjct: 401 gctcagctggtgagcgacgagagcataccgcc 370 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 327 cacgacctcccagccaggccctttcaggggga 358 |||||||||||||||||| |||||||| |||| Sbjct: 351 cacgacctcccagccaggacctttcagcggga 320
>gb|AY503337.1| Sorghum bicolor clone 0446-SC0326 RFLP probe pSB0446 Length = 401 Score = 123 bits (62), Expect = 6e-25 Identities = 98/110 (89%) Strand = Plus / Minus Query: 397 aggtccctccggtccatcaccttcaggaggtcctcgtcgctgatgtctgtctggatcatc 456 ||||| || |||||||||| ||||| |||||| || ||||||||||| |||||||||||| Sbjct: 281 aggtcgctgcggtccatcagcttcaagaggtcttcatcgctgatgtcggtctggatcatc 222 Query: 457 ctgtcttcctcgtcctgctcgtccctcagaagcgccagcagctctccctc 506 | |||||| ||||||||||||||||| || |||||||||||||| ||||| Sbjct: 221 cggtcttcttcgtcctgctcgtccctaagcagcgccagcagctccccctc 172 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 283 gctcagctggtgagcgtcgagagcatgccgcc 314 |||||||||||||||| ||||||||| ||||| Sbjct: 401 gctcagctggtgagcgacgagagcataccgcc 370 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 327 cacgacctcccagccaggccctttcaggggga 358 |||||||||||||||||| |||||||| |||| Sbjct: 351 cacgacctcccagccaggacctttcagcggga 320
>gb|AY503336.1| Sorghum bicolor clone 0446-SC0155 RFLP probe pSB0446 Length = 401 Score = 123 bits (62), Expect = 6e-25 Identities = 98/110 (89%) Strand = Plus / Minus Query: 397 aggtccctccggtccatcaccttcaggaggtcctcgtcgctgatgtctgtctggatcatc 456 ||||| || |||||||||| ||||| |||||| || ||||||||||| |||||||||||| Sbjct: 281 aggtcgctgcggtccatcagcttcaagaggtcttcatcgctgatgtcggtctggatcatc 222 Query: 457 ctgtcttcctcgtcctgctcgtccctcagaagcgccagcagctctccctc 506 | |||||| ||||||||||||||||| || |||||||||||||| ||||| Sbjct: 221 cggtcttcttcgtcctgctcgtccctaagcagcgccagcagctccccctc 172 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 283 gctcagctggtgagcgtcgagagcatgccgcc 314 |||||||||||||||| ||||||||| ||||| Sbjct: 401 gctcagctggtgagcgacgagagcataccgcc 370 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 327 cacgacctcccagccaggccctttcaggggga 358 |||||||||||||||||| |||||||| |||| Sbjct: 351 cacgacctcccagccaggacctttcagcggga 320
>gb|AY503335.1| Sorghum bicolor clone 0446-SC0033 RFLP probe pSB0446 Length = 401 Score = 123 bits (62), Expect = 6e-25 Identities = 98/110 (89%) Strand = Plus / Minus Query: 397 aggtccctccggtccatcaccttcaggaggtcctcgtcgctgatgtctgtctggatcatc 456 ||||| || |||||||||| ||||| |||||| || ||||||||||| |||||||||||| Sbjct: 281 aggtcgctgcggtccatcagcttcaagaggtcttcatcgctgatgtcggtctggatcatc 222 Query: 457 ctgtcttcctcgtcctgctcgtccctcagaagcgccagcagctctccctc 506 | |||||| ||||||||||||||||| || |||||||||||||| ||||| Sbjct: 221 cggtcttcttcgtcctgctcgtccctaagcagcgccagcagctccccctc 172 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 283 gctcagctggtgagcgtcgagagcatgccgcc 314 |||||||||||||||| ||||||||| ||||| Sbjct: 401 gctcagctggtgagcgacgagagcataccgcc 370 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 327 cacgacctcccagccaggccctttcaggggga 358 |||||||||||||||||| |||||||| |||| Sbjct: 351 cacgacctcccagccaggacctttcagcggga 320
>gb|AY503334.1| Sorghum bicolor clone 0446-RTx406 RFLP probe pSB0446 Length = 401 Score = 123 bits (62), Expect = 6e-25 Identities = 98/110 (89%) Strand = Plus / Minus Query: 397 aggtccctccggtccatcaccttcaggaggtcctcgtcgctgatgtctgtctggatcatc 456 ||||| || |||||||||| ||||| |||||| || ||||||||||| |||||||||||| Sbjct: 281 aggtcgctgcggtccatcagcttcaagaggtcttcatcgctgatgtcggtctggatcatc 222 Query: 457 ctgtcttcctcgtcctgctcgtccctcagaagcgccagcagctctccctc 506 | |||||| ||||||||||||||||| || |||||||||||||| ||||| Sbjct: 221 cggtcttcttcgtcctgctcgtccctaagcagcgccagcagctccccctc 172 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 283 gctcagctggtgagcgtcgagagcatgccgcc 314 |||||||||||||||| ||||||||| ||||| Sbjct: 401 gctcagctggtgagcgacgagagcataccgcc 370 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 327 cacgacctcccagccaggccctttcaggggga 358 |||||||||||||||||| |||||||| |||| Sbjct: 351 cacgacctcccagccaggacctttcagcggga 320
>gb|AY503333.1| Sorghum arundinaceum clone 0446-LWA8 RFLP probe pSB0446 Length = 401 Score = 123 bits (62), Expect = 6e-25 Identities = 98/110 (89%) Strand = Plus / Minus Query: 397 aggtccctccggtccatcaccttcaggaggtcctcgtcgctgatgtctgtctggatcatc 456 ||||| || |||||||||| ||||| |||||| || ||||||||||| |||||||||||| Sbjct: 281 aggtcgctgcggtccatcagcttcaagaggtcttcatcgctgatgtcggtctggatcatc 222 Query: 457 ctgtcttcctcgtcctgctcgtccctcagaagcgccagcagctctccctc 506 | |||||| ||||||||||||||||| || |||||||||||||| ||||| Sbjct: 221 cggtcttcttcgtcctgctcgtccctaagcagcgccagcagctccccctc 172 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 283 gctcagctggtgagcgtcgagagcatgccgcc 314 |||||||||||||||| ||||||||| ||||| Sbjct: 401 gctcagctggtgagcgacgagagcataccgcc 370 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 327 cacgacctcccagccaggccctttcaggggga 358 |||||||||||||||||| |||||||| |||| Sbjct: 351 cacgacctcccagccaggacctttcagcggga 320
>gb|AY503332.1| Sorghum arundinaceum clone 0446-LWA4 RFLP probe pSB0446 Length = 401 Score = 123 bits (62), Expect = 6e-25 Identities = 98/110 (89%) Strand = Plus / Minus Query: 397 aggtccctccggtccatcaccttcaggaggtcctcgtcgctgatgtctgtctggatcatc 456 ||||| || |||||||||| ||||| |||||| || ||||||||||| |||||||||||| Sbjct: 281 aggtcgctgcggtccatcagcttcaagaggtcttcatcgctgatgtcggtctggatcatc 222 Query: 457 ctgtcttcctcgtcctgctcgtccctcagaagcgccagcagctctccctc 506 | |||||| ||||||||||||||||| || |||||||||||||| ||||| Sbjct: 221 cggtcttcttcgtcctgctcgtccctaagcagcgccagcagctccccctc 172 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 283 gctcagctggtgagcgtcgagagcatgccgcc 314 |||||||||||||||| ||||||||| ||||| Sbjct: 401 gctcagctggtgagcgacgagagcataccgcc 370 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 327 cacgacctcccagccaggccctttcaggggga 358 |||||||||||||||||| |||||||| |||| Sbjct: 351 cacgacctcccagccaggacctttcagcggga 320
>gb|AY503331.1| Sorghum bicolor clone 0446-92381 RFLP probe pSB0446 Length = 401 Score = 123 bits (62), Expect = 6e-25 Identities = 98/110 (89%) Strand = Plus / Minus Query: 397 aggtccctccggtccatcaccttcaggaggtcctcgtcgctgatgtctgtctggatcatc 456 ||||| || |||||||||| ||||| |||||| || ||||||||||| |||||||||||| Sbjct: 281 aggtcgctgcggtccatcagcttcaagaggtcttcatcgctgatgtcggtctggatcatc 222 Query: 457 ctgtcttcctcgtcctgctcgtccctcagaagcgccagcagctctccctc 506 | |||||| ||||||||||||||||| || |||||||||||||| ||||| Sbjct: 221 cggtcttcttcgtcctgctcgtccctaagcagcgccagcagctccccctc 172 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 283 gctcagctggtgagcgtcgagagcatgccgcc 314 |||||||||||||||| ||||||||| ||||| Sbjct: 401 gctcagctggtgagcgacgagagcataccgcc 370 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 327 cacgacctcccagccaggccctttcaggggga 358 |||||||||||||||||| |||||||| |||| Sbjct: 351 cacgacctcccagccaggacctttcagcggga 320
>gb|AY503330.1| Sorghum bicolor clone 0446-82459 RFLP probe pSB0446 Length = 396 Score = 123 bits (62), Expect = 6e-25 Identities = 98/110 (89%) Strand = Plus / Minus Query: 397 aggtccctccggtccatcaccttcaggaggtcctcgtcgctgatgtctgtctggatcatc 456 ||||| || |||||||||| ||||| |||||| || ||||||||||| |||||||||||| Sbjct: 281 aggtcgctgcggtccatcagcttcaagaggtcttcatcgctgatgtcggtctggatcatc 222 Query: 457 ctgtcttcctcgtcctgctcgtccctcagaagcgccagcagctctccctc 506 | |||||| ||||||||||||||||| || |||||||||||||| ||||| Sbjct: 221 cggtcttcttcgtcctgctcgtccctaagcagcgccagcagctccccctc 172 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 327 cacgacctcccagccaggccctttcaggggga 358 |||||||||||||||||| |||||||| |||| Sbjct: 351 cacgacctcccagccaggacctttcagcggga 320
>gb|AY503329.1| Sorghum bicolor clone 0446-77034 RFLP probe pSB0446 Length = 401 Score = 123 bits (62), Expect = 6e-25 Identities = 98/110 (89%) Strand = Plus / Minus Query: 397 aggtccctccggtccatcaccttcaggaggtcctcgtcgctgatgtctgtctggatcatc 456 ||||| || |||||||||| ||||| |||||| || ||||||||||| |||||||||||| Sbjct: 281 aggtcgctgcggtccatcagcttcaagaggtcttcatcgctgatgtcggtctggatcatc 222 Query: 457 ctgtcttcctcgtcctgctcgtccctcagaagcgccagcagctctccctc 506 | |||||| ||||||||||||||||| || |||||||||||||| ||||| Sbjct: 221 cggtcttcttcgtcctgctcgtccctaagcagcgccagcagctccccctc 172 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 283 gctcagctggtgagcgtcgagagcatgccgcc 314 |||||||||||||||| ||||||||| ||||| Sbjct: 401 gctcagctggtgagcgacgagagcataccgcc 370 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 327 cacgacctcccagccaggccctttcaggggga 358 |||||||||||||||||| |||||||| |||| Sbjct: 351 cacgacctcccagccaggacctttcagcggga 320
>gb|AY503328.1| Sorghum bicolor clone 0446-56174 RFLP probe pSB0446 Length = 396 Score = 123 bits (62), Expect = 6e-25 Identities = 98/110 (89%) Strand = Plus / Minus Query: 397 aggtccctccggtccatcaccttcaggaggtcctcgtcgctgatgtctgtctggatcatc 456 ||||| || |||||||||| ||||| |||||| || ||||||||||| |||||||||||| Sbjct: 281 aggtcgctgcggtccatcagcttcaagaggtcttcatcgctgatgtcggtctggatcatc 222 Query: 457 ctgtcttcctcgtcctgctcgtccctcagaagcgccagcagctctccctc 506 | |||||| ||||||||||||||||| || |||||||||||||| ||||| Sbjct: 221 cggtcttcttcgtcctgctcgtccctaagcagcgccagcagctccccctc 172 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 327 cacgacctcccagccaggccctttcaggggga 358 |||||||||||||||||| |||||||| |||| Sbjct: 351 cacgacctcccagccaggacctttcagcggga 320
>gb|AY503327.1| Sorghum bicolor clone 0446-56003 RFLP probe pSB0446 Length = 401 Score = 123 bits (62), Expect = 6e-25 Identities = 98/110 (89%) Strand = Plus / Minus Query: 397 aggtccctccggtccatcaccttcaggaggtcctcgtcgctgatgtctgtctggatcatc 456 ||||| || |||||||||| ||||| |||||| || ||||||||||| |||||||||||| Sbjct: 281 aggtcgctgcggtccatcagcttcaagaggtcttcatcgctgatgtcggtctggatcatc 222 Query: 457 ctgtcttcctcgtcctgctcgtccctcagaagcgccagcagctctccctc 506 | |||||| ||||||||||||||||| || |||||||||||||| ||||| Sbjct: 221 cggtcttcttcgtcctgctcgtccctaagcagcgccagcagctccccctc 172 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 283 gctcagctggtgagcgtcgagagcatgccgcc 314 |||||||||||||||| ||||||||| ||||| Sbjct: 401 gctcagctggtgagcgacgagagcataccgcc 370 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 327 cacgacctcccagccaggccctttcaggggga 358 |||||||||||||||||| |||||||| |||| Sbjct: 351 cacgacctcccagccaggacctttcagcggga 320
>gb|AY503326.1| Sorghum bicolor clone 0446-514605 RFLP probe pSB0446 Length = 401 Score = 123 bits (62), Expect = 6e-25 Identities = 98/110 (89%) Strand = Plus / Minus Query: 397 aggtccctccggtccatcaccttcaggaggtcctcgtcgctgatgtctgtctggatcatc 456 ||||| || |||||||||| ||||| |||||| || ||||||||||| |||||||||||| Sbjct: 281 aggtcgctgcggtccatcagcttcaagaggtcttcatcgctgatgtcggtctggatcatc 222 Query: 457 ctgtcttcctcgtcctgctcgtccctcagaagcgccagcagctctccctc 506 | |||||| ||||||||||||||||| || |||||||||||||| ||||| Sbjct: 221 cggtcttcttcgtcctgctcgtccctaagcagcgccagcagctccccctc 172 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 283 gctcagctggtgagcgtcgagagcatgccgcc 314 |||||||||||||||| ||||||||| ||||| Sbjct: 401 gctcagctggtgagcgacgagagcataccgcc 370 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 327 cacgacctcccagccaggccctttcaggggga 358 |||||||||||||||||| |||||||| |||| Sbjct: 351 cacgacctcccagccaggacctttcagcggga 320
>gb|AY503325.1| Sorghum bicolor clone 0446-51030 RFLP probe pSB0446 Length = 401 Score = 123 bits (62), Expect = 6e-25 Identities = 98/110 (89%) Strand = Plus / Minus Query: 397 aggtccctccggtccatcaccttcaggaggtcctcgtcgctgatgtctgtctggatcatc 456 ||||| || |||||||||| ||||| |||||| || ||||||||||| |||||||||||| Sbjct: 281 aggtcgctgcggtccatcagcttcaagaggtcttcatcgctgatgtcggtctggatcatc 222 Query: 457 ctgtcttcctcgtcctgctcgtccctcagaagcgccagcagctctccctc 506 | |||||| ||||||||||||||||| || |||||||||||||| ||||| Sbjct: 221 cggtcttcttcgtcctgctcgtccctaagcagcgccagcagctccccctc 172 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 283 gctcagctggtgagcgtcgagagcatgccgcc 314 |||||||||||||||| ||||||||| ||||| Sbjct: 401 gctcagctggtgagcgacgagagcataccgcc 370 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 327 cacgacctcccagccaggccctttcaggggga 358 |||||||||||||||||| |||||||| |||| Sbjct: 351 cacgacctcccagccaggacctttcagcggga 320
>gb|AY503324.1| Sorghum bicolor clone 0446-50875 RFLP probe pSB0446 Length = 401 Score = 123 bits (62), Expect = 6e-25 Identities = 98/110 (89%) Strand = Plus / Minus Query: 397 aggtccctccggtccatcaccttcaggaggtcctcgtcgctgatgtctgtctggatcatc 456 ||||| || |||||||||| ||||| |||||| || ||||||||||| |||||||||||| Sbjct: 281 aggtcgctgcggtccatcagcttcaagaggtcttcatcgctgatgtcggtctggatcatc 222 Query: 457 ctgtcttcctcgtcctgctcgtccctcagaagcgccagcagctctccctc 506 | |||||| ||||||||||||||||| || |||||||||||||| ||||| Sbjct: 221 cggtcttcttcgtcctgctcgtccctaagcagcgccagcagctccccctc 172 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 283 gctcagctggtgagcgtcgagagcatgccgcc 314 |||||||||||||||| ||||||||| ||||| Sbjct: 401 gctcagctggtgagcgacgagagcataccgcc 370 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 327 cacgacctcccagccaggccctttcaggggga 358 |||||||||||||||||| |||||||| |||| Sbjct: 351 cacgacctcccagccaggacctttcagcggga 320
>gb|AY503323.1| Sorghum bicolor clone 0446-257595 RFLP probe pSB0446 Length = 401 Score = 123 bits (62), Expect = 6e-25 Identities = 98/110 (89%) Strand = Plus / Minus Query: 397 aggtccctccggtccatcaccttcaggaggtcctcgtcgctgatgtctgtctggatcatc 456 ||||| || |||||||||| ||||| |||||| || ||||||||||| |||||||||||| Sbjct: 281 aggtcgctgcggtccatcagcttcaagaggtcttcatcgctgatgtcggtctggatcatc 222 Query: 457 ctgtcttcctcgtcctgctcgtccctcagaagcgccagcagctctccctc 506 | |||||| ||||||||||||||||| || |||||||||||||| ||||| Sbjct: 221 cggtcttcttcgtcctgctcgtccctaagcagcgccagcagctccccctc 172 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 283 gctcagctggtgagcgtcgagagcatgccgcc 314 |||||||||||||||| ||||||||| ||||| Sbjct: 401 gctcagctggtgagcgacgagagcataccgcc 370 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 327 cacgacctcccagccaggccctttcaggggga 358 |||||||||||||||||| |||||||| |||| Sbjct: 351 cacgacctcccagccaggacctttcagcggga 320
>gb|AY503322.1| Sorghum bicolor clone 0446-22913 RFLP probe pSB0446 Length = 401 Score = 123 bits (62), Expect = 6e-25 Identities = 98/110 (89%) Strand = Plus / Minus Query: 397 aggtccctccggtccatcaccttcaggaggtcctcgtcgctgatgtctgtctggatcatc 456 ||||| || |||||||||| ||||| |||||| || ||||||||||| |||||||||||| Sbjct: 281 aggtcgctgcggtccatcagcttcaagaggtcttcatcgctgatgtcggtctggatcatc 222 Query: 457 ctgtcttcctcgtcctgctcgtccctcagaagcgccagcagctctccctc 506 | |||||| ||||||||||||||||| || |||||||||||||| ||||| Sbjct: 221 cggtcttcttcgtcctgctcgtccctaagcagcgccagcagctccccctc 172 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 283 gctcagctggtgagcgtcgagagcatgccgcc 314 |||||||||||||||| ||||||||| ||||| Sbjct: 401 gctcagctggtgagcgacgagagcataccgcc 370 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 327 cacgacctcccagccaggccctttcaggggga 358 |||||||||||||||||| |||||||| |||| Sbjct: 351 cacgacctcccagccaggacctttcagcggga 320
>gb|AY503321.1| Sorghum arundinaceum clone 0446-225905 RFLP probe pSB0446 Length = 401 Score = 123 bits (62), Expect = 6e-25 Identities = 98/110 (89%) Strand = Plus / Minus Query: 397 aggtccctccggtccatcaccttcaggaggtcctcgtcgctgatgtctgtctggatcatc 456 ||||| || |||||||||| ||||| |||||| || ||||||||||| |||||||||||| Sbjct: 281 aggtcgctgcggtccatcagcttcaagaggtcttcatcgctgatgtcggtctggatcatc 222 Query: 457 ctgtcttcctcgtcctgctcgtccctcagaagcgccagcagctctccctc 506 | |||||| ||||||||||||||||| || |||||||||||||| ||||| Sbjct: 221 cggtcttcttcgtcctgctcgtccctaagcagcgccagcagctccccctc 172 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 283 gctcagctggtgagcgtcgagagcatgccgcc 314 |||||||||||||||| ||||||||| ||||| Sbjct: 401 gctcagctggtgagcgacgagagcataccgcc 370 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 327 cacgacctcccagccaggccctttcaggggga 358 |||||||||||||||||| |||||||| |||| Sbjct: 351 cacgacctcccagccaggacctttcagcggga 320
>gb|AY503320.1| Sorghum bicolor clone 0446-195684 RFLP probe pSB0446 Length = 401 Score = 123 bits (62), Expect = 6e-25 Identities = 98/110 (89%) Strand = Plus / Minus Query: 397 aggtccctccggtccatcaccttcaggaggtcctcgtcgctgatgtctgtctggatcatc 456 ||||| || |||||||||| ||||| |||||| || ||||||||||| |||||||||||| Sbjct: 281 aggtcgctgcggtccatcagcttcaagaggtcttcatcgctgatgtcggtctggatcatc 222 Query: 457 ctgtcttcctcgtcctgctcgtccctcagaagcgccagcagctctccctc 506 | |||||| ||||||||||||||||| || |||||||||||||| ||||| Sbjct: 221 cggtcttcttcgtcctgctcgtccctaagcagcgccagcagctccccctc 172 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 283 gctcagctggtgagcgtcgagagcatgccgcc 314 |||||||||||||||| ||||||||| ||||| Sbjct: 401 gctcagctggtgagcgacgagagcataccgcc 370 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 327 cacgacctcccagccaggccctttcaggggga 358 |||||||||||||||||| |||||||| |||| Sbjct: 351 cacgacctcccagccaggacctttcagcggga 320
>gb|AY503319.1| Sorghum bicolor clone 0446-152702 RFLP probe pSB0446 Length = 401 Score = 123 bits (62), Expect = 6e-25 Identities = 98/110 (89%) Strand = Plus / Minus Query: 397 aggtccctccggtccatcaccttcaggaggtcctcgtcgctgatgtctgtctggatcatc 456 ||||| || |||||||||| ||||| |||||| || ||||||||||| |||||||||||| Sbjct: 281 aggtcgctgcggtccatcagcttcaagaggtcttcatcgctgatgtcggtctggatcatc 222 Query: 457 ctgtcttcctcgtcctgctcgtccctcagaagcgccagcagctctccctc 506 | |||||| ||||||||||||||||| || |||||||||||||| ||||| Sbjct: 221 cggtcttcttcgtcctgctcgtccctaagcagcgccagcagctccccctc 172 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 283 gctcagctggtgagcgtcgagagcatgccgcc 314 |||||||||||||||| ||||||||| ||||| Sbjct: 401 gctcagctggtgagcgacgagagcataccgcc 370 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 327 cacgacctcccagccaggccctttcaggggga 358 |||||||||||||||||| |||||||| |||| Sbjct: 351 cacgacctcccagccaggacctttcagcggga 320
>gb|AY503318.1| Sorghum bicolor clone 0446-102069 RFLP probe pSB0446 Length = 401 Score = 123 bits (62), Expect = 6e-25 Identities = 98/110 (89%) Strand = Plus / Minus Query: 397 aggtccctccggtccatcaccttcaggaggtcctcgtcgctgatgtctgtctggatcatc 456 ||||| || |||||||||| ||||| |||||| || ||||||||||| |||||||||||| Sbjct: 281 aggtcgctgcggtccatcagcttcaagaggtcttcatcgctgatgtcggtctggatcatc 222 Query: 457 ctgtcttcctcgtcctgctcgtccctcagaagcgccagcagctctccctc 506 | |||||| ||||||||||||||||| || |||||||||||||| ||||| Sbjct: 221 cggtcttcttcgtcctgctcgtccctaagcagcgccagcagctccccctc 172 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 283 gctcagctggtgagcgtcgagagcatgccgcc 314 |||||||||||||||| ||||||||| ||||| Sbjct: 401 gctcagctggtgagcgacgagagcataccgcc 370 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 327 cacgacctcccagccaggccctttcaggggga 358 |||||||||||||||||| |||||||| |||| Sbjct: 351 cacgacctcccagccaggacctttcagcggga 320
>gb|AY503317.1| Sorghum bicolor clone 0446-RTx430 RFLP probe pSB0446 Length = 401 Score = 123 bits (62), Expect = 6e-25 Identities = 98/110 (89%) Strand = Plus / Minus Query: 397 aggtccctccggtccatcaccttcaggaggtcctcgtcgctgatgtctgtctggatcatc 456 ||||| || |||||||||| ||||| |||||| || ||||||||||| |||||||||||| Sbjct: 281 aggtcgctgcggtccatcagcttcaagaggtcttcatcgctgatgtcggtctggatcatc 222 Query: 457 ctgtcttcctcgtcctgctcgtccctcagaagcgccagcagctctccctc 506 | |||||| ||||||||||||||||| || |||||||||||||| ||||| Sbjct: 221 cggtcttcttcgtcctgctcgtccctaagcagcgccagcagctccccctc 172 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 283 gctcagctggtgagcgtcgagagcatgccgcc 314 |||||||||||||||| ||||||||| ||||| Sbjct: 401 gctcagctggtgagcgacgagagcataccgcc 370 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 327 cacgacctcccagccaggccctttcaggggga 358 |||||||||||||||||| |||||||| |||| Sbjct: 351 cacgacctcccagccaggacctttcagcggga 320
>gb|AY503316.1| Sorghum bicolor clone 0446-BTx3197 RFLP probe pSB0446 Length = 401 Score = 123 bits (62), Expect = 6e-25 Identities = 98/110 (89%) Strand = Plus / Minus Query: 397 aggtccctccggtccatcaccttcaggaggtcctcgtcgctgatgtctgtctggatcatc 456 ||||| || |||||||||| ||||| |||||| || ||||||||||| |||||||||||| Sbjct: 281 aggtcgctgcggtccatcagcttcaagaggtcttcatcgctgatgtcggtctggatcatc 222 Query: 457 ctgtcttcctcgtcctgctcgtccctcagaagcgccagcagctctccctc 506 | |||||| ||||||||||||||||| || |||||||||||||| ||||| Sbjct: 221 cggtcttcttcgtcctgctcgtccctaagcagcgccagcagctccccctc 172 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 283 gctcagctggtgagcgtcgagagcatgccgcc 314 |||||||||||||||| ||||||||| ||||| Sbjct: 401 gctcagctggtgagcgacgagagcataccgcc 370 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 327 cacgacctcccagccaggccctttcaggggga 358 |||||||||||||||||| |||||||| |||| Sbjct: 351 cacgacctcccagccaggacctttcagcggga 320
>gb|AY111236.1| Zea mays CL31103_1 mRNA sequence Length = 688 Score = 121 bits (61), Expect = 2e-24 Identities = 106/121 (87%) Strand = Plus / Plus Query: 395 tgaggtccctccggtccatcaccttcaggaggtcctcgtcgctgatgtctgtctggatca 454 ||||||| ||||||||||||| | || |||||||||||||||||||||| ||||||| | Sbjct: 554 tgaggtcgctccggtccatcagcctctggaggtcctcgtcgctgatgtcggtctggacga 613 Query: 455 tcctgtcttcctcgtcctgctcgtccctcagaagcgccagcagctctccctcatctaagg 514 ||||||| |||||| ||||||| || | ||||||||||||||||| || |||||||||| Sbjct: 614 tcctgtcctcctcggtctgctcggccttgagaagcgccagcagctcaccttcatctaagg 673 Query: 515 c 515 | Sbjct: 674 c 674 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 282 ggctcagctggtgagcgtcgagagcatgccgccgcca 318 ||||||||||||||||| ||| ||||||||||||||| Sbjct: 429 ggctcagctggtgagcgacgacagcatgccgccgcca 465
>gb|AF461813.1| Zea mays chromatin complex subunit A101 (cha101) mRNA, complete cds Length = 2643 Score = 117 bits (59), Expect = 4e-23 Identities = 104/119 (87%) Strand = Plus / Minus Query: 397 aggtccctccggtccatcaccttcaggaggtcctcgtcgctgatgtctgtctggatcatc 456 ||||| ||||||||||||| | || |||||||||||| ||||||||| ||||||| ||| Sbjct: 2253 aggtcgctccggtccatcagcctctggaggtcctcgttgctgatgtcggtctggacgatc 2194 Query: 457 ctgtcttcctcgtcctgctcgtccctcagaagcgccagcagctctccctcatctaaggc 515 ||||| |||||| |||||||||| | ||||||||||||||||| || ||||||||||| Sbjct: 2193 ctgtcctcctcggtctgctcgtccttgagaagcgccagcagctcaccttcatctaaggc 2135 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 282 ggctcagctggtgagcgtcgagagcatgccgccgcca 318 ||||||||||||||||| ||| ||||||||||||||| Sbjct: 2386 ggctcagctggtgagcgacgacagcatgccgccgcca 2350
>gb|DQ429131.1| Sorghum bicolor voucher PI585454 locus pSB0446 genomic sequence Length = 653 Score = 117 bits (59), Expect = 4e-23 Identities = 97/110 (88%) Strand = Plus / Minus Query: 397 aggtccctccggtccatcaccttcaggaggtcctcgtcgctgatgtctgtctggatcatc 456 ||||| || |||||||||| ||||| |||||| || ||||||||||| |||||||||||| Sbjct: 367 aggtcgctgcggtccatcagcttcaagaggtcttcatcgctgatgtcggtctggatcatc 308 Query: 457 ctgtcttcctcgtcctgctcgtccctcagaagcgccagcagctctccctc 506 | ||||| ||||||||||||||||| || |||||||||||||| ||||| Sbjct: 307 cggtcttnttcgtcctgctcgtccctaagcagcgccagcagctccccctc 258 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 283 gctcagctggtgagcgtcgagagcatgccgcc 314 |||||||||||||||| ||||||||| ||||| Sbjct: 487 gctcagctggtgagcgacgagagcataccgcc 456 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 327 cacgacctcccagccaggccctttcaggggga 358 |||||||||||||||||| |||||||| |||| Sbjct: 437 cacgacctcccagccaggacctttcagcggga 406
>gb|DQ429130.1| Sorghum bicolor voucher PI267539 locus pSB0446 genomic sequence Length = 653 Score = 117 bits (59), Expect = 4e-23 Identities = 97/110 (88%) Strand = Plus / Minus Query: 397 aggtccctccggtccatcaccttcaggaggtcctcgtcgctgatgtctgtctggatcatc 456 ||||| || |||||||||| ||||| |||||| || ||||||||||| |||||||||||| Sbjct: 367 aggtcgctgcggtccatcagcttcaagaggtcttcatcgctgatgtcggtctggatcatc 308 Query: 457 ctgtcttcctcgtcctgctcgtccctcagaagcgccagcagctctccctc 506 | ||||| ||||||||||||||||| || |||||||||||||| ||||| Sbjct: 307 cggtcttnttcgtcctgctcgtccctaagcagcgccagcagctccccctc 258 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 283 gctcagctggtgagcgtcgagagcatgccgcc 314 |||||||||||||||| ||||||||| ||||| Sbjct: 487 gctcagctggtgagcgacgagagcataccgcc 456 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 327 cacgacctcccagccaggccctttcaggggga 358 |||||||||||||||||| |||||||| |||| Sbjct: 437 cacgacctcccagccaggacctttcagcggga 406
>gb|DQ429129.1| Sorghum bicolor voucher PI267408 locus pSB0446 genomic sequence Length = 653 Score = 117 bits (59), Expect = 4e-23 Identities = 97/110 (88%) Strand = Plus / Minus Query: 397 aggtccctccggtccatcaccttcaggaggtcctcgtcgctgatgtctgtctggatcatc 456 ||||| || |||||||||| ||||| |||||| || ||||||||||| |||||||||||| Sbjct: 367 aggtcgctgcggtccatcagcttcaagaggtcttcatcgctgatgtcggtctggatcatc 308 Query: 457 ctgtcttcctcgtcctgctcgtccctcagaagcgccagcagctctccctc 506 | ||||| ||||||||||||||||| || |||||||||||||| ||||| Sbjct: 307 cggtcttnttcgtcctgctcgtccctaagcagcgccagcagctccccctc 258 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 283 gctcagctggtgagcgtcgagagcatgccgcc 314 |||||||||||||||| ||||||||| ||||| Sbjct: 487 gctcagctggtgagcgacgagagcataccgcc 456 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 327 cacgacctcccagccaggccctttcaggggga 358 |||||||||||||||||| |||||||| |||| Sbjct: 437 cacgacctcccagccaggacctttcagcggga 406
>gb|DQ429128.1| Sorghum bicolor voucher PI221607 locus pSB0446 genomic sequence Length = 653 Score = 117 bits (59), Expect = 4e-23 Identities = 97/110 (88%) Strand = Plus / Minus Query: 397 aggtccctccggtccatcaccttcaggaggtcctcgtcgctgatgtctgtctggatcatc 456 ||||| || |||||||||| ||||| |||||| || ||||||||||| |||||||||||| Sbjct: 367 aggtcgctgcggtccatcagcttcaagaggtcttcatcgctgatgtcggtctggatcatc 308 Query: 457 ctgtcttcctcgtcctgctcgtccctcagaagcgccagcagctctccctc 506 | ||||| ||||||||||||||||| || |||||||||||||| ||||| Sbjct: 307 cggtcttnttcgtcctgctcgtccctaagcagcgccagcagctccccctc 258 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 283 gctcagctggtgagcgtcgagagcatgccgcc 314 |||||||||||||||| ||||||||| ||||| Sbjct: 487 gctcagctggtgagcgacgagagcataccgcc 456 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 327 cacgacctcccagccaggccctttcaggggga 358 |||||||||||||||||| |||||||| |||| Sbjct: 437 cacgacctcccagccaggacctttcagcggga 406
>gb|DQ429127.1| Sorghum bicolor voucher PI152702 locus pSB0446 genomic sequence Length = 653 Score = 117 bits (59), Expect = 4e-23 Identities = 97/110 (88%) Strand = Plus / Minus Query: 397 aggtccctccggtccatcaccttcaggaggtcctcgtcgctgatgtctgtctggatcatc 456 ||||| || |||||||||| ||||| |||||| || ||||||||||| |||||||||||| Sbjct: 367 aggtcgctgcggtccatcagcttcaagaggtcttcatcgctgatgtcggtctggatcatc 308 Query: 457 ctgtcttcctcgtcctgctcgtccctcagaagcgccagcagctctccctc 506 | ||||| ||||||||||||||||| || |||||||||||||| ||||| Sbjct: 307 cggtcttnttcgtcctgctcgtccctaagcagcgccagcagctccccctc 258 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 283 gctcagctggtgagcgtcgagagcatgccgcc 314 |||||||||||||||| ||||||||| ||||| Sbjct: 487 gctcagctggtgagcgacgagagcataccgcc 456 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 327 cacgacctcccagccaggccctttcaggggga 358 |||||||||||||||||| |||||||| |||| Sbjct: 437 cacgacctcccagccaggacctttcagcggga 406
>gb|DQ429126.1| Sorghum bicolor voucher NSL87902 locus pSB0446 genomic sequence Length = 653 Score = 117 bits (59), Expect = 4e-23 Identities = 97/110 (88%) Strand = Plus / Minus Query: 397 aggtccctccggtccatcaccttcaggaggtcctcgtcgctgatgtctgtctggatcatc 456 ||||| || |||||||||| ||||| |||||| || ||||||||||| |||||||||||| Sbjct: 367 aggtcgctgcggtccatcagcttcaagaggtcttcatcgctgatgtcggtctggatcatc 308 Query: 457 ctgtcttcctcgtcctgctcgtccctcagaagcgccagcagctctccctc 506 | ||||| ||||||||||||||||| || |||||||||||||| ||||| Sbjct: 307 cggtcttnttcgtcctgctcgtccctaagcagcgccagcagctccccctc 258 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 283 gctcagctggtgagcgtcgagagcatgccgcc 314 |||||||||||||||| ||||||||| ||||| Sbjct: 487 gctcagctggtgagcgacgagagcataccgcc 456 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 327 cacgacctcccagccaggccctttcaggggga 358 |||||||||||||||||| |||||||| |||| Sbjct: 437 cacgacctcccagccaggacctttcagcggga 406
>gb|DQ429125.1| Sorghum bicolor voucher NSL87666 locus pSB0446 genomic sequence Length = 653 Score = 117 bits (59), Expect = 4e-23 Identities = 97/110 (88%) Strand = Plus / Minus Query: 397 aggtccctccggtccatcaccttcaggaggtcctcgtcgctgatgtctgtctggatcatc 456 ||||| || |||||||||| ||||| |||||| || ||||||||||| |||||||||||| Sbjct: 367 aggtcgctgcggtccatcagcttcaagaggtcttcatcgctgatgtcggtctggatcatc 308 Query: 457 ctgtcttcctcgtcctgctcgtccctcagaagcgccagcagctctccctc 506 | ||||| ||||||||||||||||| || |||||||||||||| ||||| Sbjct: 307 cggtcttnttcgtcctgctcgtccctaagcagcgccagcagctccccctc 258 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 283 gctcagctggtgagcgtcgagagcatgccgcc 314 |||||||||||||||| ||||||||| ||||| Sbjct: 487 gctcagctggtgagcgacgagagcataccgcc 456 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 327 cacgacctcccagccaggccctttcaggggga 358 |||||||||||||||||| |||||||| |||| Sbjct: 437 cacgacctcccagccaggacctttcagcggga 406
>gb|DQ429124.1| Sorghum bicolor voucher NSL77034 locus pSB0446 genomic sequence Length = 653 Score = 117 bits (59), Expect = 4e-23 Identities = 97/110 (88%) Strand = Plus / Minus Query: 397 aggtccctccggtccatcaccttcaggaggtcctcgtcgctgatgtctgtctggatcatc 456 ||||| || |||||||||| ||||| |||||| || ||||||||||| |||||||||||| Sbjct: 367 aggtcgctgcggtccatcagcttcaagaggtcttcatcgctgatgtcggtctggatcatc 308 Query: 457 ctgtcttcctcgtcctgctcgtccctcagaagcgccagcagctctccctc 506 | ||||| ||||||||||||||||| || |||||||||||||| ||||| Sbjct: 307 cggtcttnttcgtcctgctcgtccctaagcagcgccagcagctccccctc 258 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 283 gctcagctggtgagcgtcgagagcatgccgcc 314 |||||||||||||||| ||||||||| ||||| Sbjct: 487 gctcagctggtgagcgacgagagcataccgcc 456 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 327 cacgacctcccagccaggccctttcaggggga 358 |||||||||||||||||| |||||||| |||| Sbjct: 437 cacgacctcccagccaggacctttcagcggga 406
>gb|DQ429123.1| Sorghum bicolor voucher NSL56174 locus pSB0446 genomic sequence Length = 653 Score = 117 bits (59), Expect = 4e-23 Identities = 97/110 (88%) Strand = Plus / Minus Query: 397 aggtccctccggtccatcaccttcaggaggtcctcgtcgctgatgtctgtctggatcatc 456 ||||| || |||||||||| ||||| |||||| || ||||||||||| |||||||||||| Sbjct: 367 aggtcgctgcggtccatcagcttcaagaggtcttcatcgctgatgtcggtctggatcatc 308 Query: 457 ctgtcttcctcgtcctgctcgtccctcagaagcgccagcagctctccctc 506 | ||||| ||||||||||||||||| || |||||||||||||| ||||| Sbjct: 307 cggtcttnttcgtcctgctcgtccctaagcagcgccagcagctccccctc 258 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 283 gctcagctggtgagcgtcgagagcatgccgcc 314 |||||||||||||||| ||||||||| ||||| Sbjct: 487 gctcagctggtgagcgacgagagcataccgcc 456 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 327 cacgacctcccagccaggccctttcaggggga 358 |||||||||||||||||| |||||||| |||| Sbjct: 437 cacgacctcccagccaggacctttcagcggga 406
>gb|DQ429122.1| Sorghum bicolor voucher NSL56003 locus pSB0446 genomic sequence Length = 653 Score = 117 bits (59), Expect = 4e-23 Identities = 97/110 (88%) Strand = Plus / Minus Query: 397 aggtccctccggtccatcaccttcaggaggtcctcgtcgctgatgtctgtctggatcatc 456 ||||| || |||||||||| ||||| |||||| || ||||||||||| |||||||||||| Sbjct: 367 aggtcgctgcggtccatcagcttcaagaggtcttcatcgctgatgtcggtctggatcatc 308 Query: 457 ctgtcttcctcgtcctgctcgtccctcagaagcgccagcagctctccctc 506 | ||||| ||||||||||||||||| || |||||||||||||| ||||| Sbjct: 307 cggtcttnttcgtcctgctcgtccctaagcagcgccagcagctccccctc 258 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 283 gctcagctggtgagcgtcgagagcatgccgcc 314 |||||||||||||||| ||||||||| ||||| Sbjct: 487 gctcagctggtgagcgacgagagcataccgcc 456 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 327 cacgacctcccagccaggccctttcaggggga 358 |||||||||||||||||| |||||||| |||| Sbjct: 437 cacgacctcccagccaggacctttcagcggga 406
>gb|DQ429121.1| Sorghum bicolor voucher NSL55243 locus pSB0446 genomic sequence Length = 653 Score = 117 bits (59), Expect = 4e-23 Identities = 97/110 (88%) Strand = Plus / Minus Query: 397 aggtccctccggtccatcaccttcaggaggtcctcgtcgctgatgtctgtctggatcatc 456 ||||| || |||||||||| ||||| |||||| || ||||||||||| |||||||||||| Sbjct: 367 aggtcgctgcggtccatcagcttcaagaggtcttcatcgctgatgtcggtctggatcatc 308 Query: 457 ctgtcttcctcgtcctgctcgtccctcagaagcgccagcagctctccctc 506 | ||||| ||||||||||||||||| || |||||||||||||| ||||| Sbjct: 307 cggtcttnttcgtcctgctcgtccctaagcagcgccagcagctccccctc 258 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 283 gctcagctggtgagcgtcgagagcatgccgcc 314 |||||||||||||||| ||||||||| ||||| Sbjct: 487 gctcagctggtgagcgacgagagcataccgcc 456 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 327 cacgacctcccagccaggccctttcaggggga 358 |||||||||||||||||| |||||||| |||| Sbjct: 437 cacgacctcccagccaggacctttcagcggga 406
>gb|DQ429120.1| Sorghum bicolor voucher NSL51365 locus pSB0446 genomic sequence Length = 653 Score = 117 bits (59), Expect = 4e-23 Identities = 97/110 (88%) Strand = Plus / Minus Query: 397 aggtccctccggtccatcaccttcaggaggtcctcgtcgctgatgtctgtctggatcatc 456 ||||| || |||||||||| ||||| |||||| || ||||||||||| |||||||||||| Sbjct: 367 aggtcgctgcggtccatcagcttcaagaggtcttcatcgctgatgtcggtctggatcatc 308 Query: 457 ctgtcttcctcgtcctgctcgtccctcagaagcgccagcagctctccctc 506 | ||||| ||||||||||||||||| || |||||||||||||| ||||| Sbjct: 307 cggtcttnttcgtcctgctcgtccctaagcagcgccagcagctccccctc 258 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 283 gctcagctggtgagcgtcgagagcatgccgcc 314 |||||||||||||||| ||||||||| ||||| Sbjct: 487 gctcagctggtgagcgacgagagcataccgcc 456 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 327 cacgacctcccagccaggccctttcaggggga 358 |||||||||||||||||| |||||||| |||| Sbjct: 437 cacgacctcccagccaggacctttcagcggga 406
>gb|DQ429119.1| Sorghum bicolor voucher NSL51030 locus pSB0446 genomic sequence Length = 653 Score = 117 bits (59), Expect = 4e-23 Identities = 97/110 (88%) Strand = Plus / Minus Query: 397 aggtccctccggtccatcaccttcaggaggtcctcgtcgctgatgtctgtctggatcatc 456 ||||| || |||||||||| ||||| |||||| || ||||||||||| |||||||||||| Sbjct: 367 aggtcgctgcggtccatcagcttcaagaggtcttcatcgctgatgtcggtctggatcatc 308 Query: 457 ctgtcttcctcgtcctgctcgtccctcagaagcgccagcagctctccctc 506 | ||||| ||||||||||||||||| || |||||||||||||| ||||| Sbjct: 307 cggtcttnttcgtcctgctcgtccctaagcagcgccagcagctccccctc 258 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 283 gctcagctggtgagcgtcgagagcatgccgcc 314 |||||||||||||||| ||||||||| ||||| Sbjct: 487 gctcagctggtgagcgacgagagcataccgcc 456 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 327 cacgacctcccagccaggccctttcaggggga 358 |||||||||||||||||| |||||||| |||| Sbjct: 437 cacgacctcccagccaggacctttcagcggga 406
>gb|DQ429118.1| Sorghum bicolor voucher NSL50875 locus pSB0446 genomic sequence Length = 653 Score = 117 bits (59), Expect = 4e-23 Identities = 97/110 (88%) Strand = Plus / Minus Query: 397 aggtccctccggtccatcaccttcaggaggtcctcgtcgctgatgtctgtctggatcatc 456 ||||| || |||||||||| ||||| |||||| || ||||||||||| |||||||||||| Sbjct: 367 aggtcgctgcggtccatcagcttcaagaggtcttcatcgctgatgtcggtctggatcatc 308 Query: 457 ctgtcttcctcgtcctgctcgtccctcagaagcgccagcagctctccctc 506 | ||||| ||||||||||||||||| || |||||||||||||| ||||| Sbjct: 307 cggtcttnttcgtcctgctcgtccctaagcagcgccagcagctccccctc 258 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 283 gctcagctggtgagcgtcgagagcatgccgcc 314 |||||||||||||||| ||||||||| ||||| Sbjct: 487 gctcagctggtgagcgacgagagcataccgcc 456 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 327 cacgacctcccagccaggccctttcaggggga 358 |||||||||||||||||| |||||||| |||| Sbjct: 437 cacgacctcccagccaggacctttcagcggga 406
>gb|DQ429117.1| Sorghum bicolor voucher BTx623 locus pSB0446 genomic sequence Length = 653 Score = 117 bits (59), Expect = 4e-23 Identities = 97/110 (88%) Strand = Plus / Minus Query: 397 aggtccctccggtccatcaccttcaggaggtcctcgtcgctgatgtctgtctggatcatc 456 ||||| || |||||||||| ||||| |||||| || ||||||||||| |||||||||||| Sbjct: 367 aggtcgctgcggtccatcagcttcaagaggtcttcatcgctgatgtcggtctggatcatc 308 Query: 457 ctgtcttcctcgtcctgctcgtccctcagaagcgccagcagctctccctc 506 | ||||| ||||||||||||||||| || |||||||||||||| ||||| Sbjct: 307 cggtcttnttcgtcctgctcgtccctaagcagcgccagcagctccccctc 258 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 283 gctcagctggtgagcgtcgagagcatgccgcc 314 |||||||||||||||| ||||||||| ||||| Sbjct: 487 gctcagctggtgagcgacgagagcataccgcc 456 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 327 cacgacctcccagccaggccctttcaggggga 358 |||||||||||||||||| |||||||| |||| Sbjct: 437 cacgacctcccagccaggacctttcagcggga 406
>gb|DQ429132.1| Sorghum propinquum locus pSB0446 genomic sequence Length = 653 Score = 109 bits (55), Expect = 9e-21 Identities = 96/110 (87%) Strand = Plus / Minus Query: 397 aggtccctccggtccatcaccttcaggaggtcctcgtcgctgatgtctgtctggatcatc 456 ||||| || |||||||||| ||||| |||||| || | ||||||||| |||||||||||| Sbjct: 367 aggtcgctgcggtccatcagcttcaagaggtcttcatggctgatgtcggtctggatcatc 308 Query: 457 ctgtcttcctcgtcctgctcgtccctcagaagcgccagcagctctccctc 506 | ||||| ||||||||||||||||| || |||||||||||||| ||||| Sbjct: 307 cggtcttnttcgtcctgctcgtccctaagcagcgccagcagctccccctc 258 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 283 gctcagctggtgagcgtcgagagcatgccgcc 314 |||||||||||||||| ||||||||| ||||| Sbjct: 487 gctcagctggtgagcgacgagagcataccgcc 456 Score = 48.1 bits (24), Expect = 0.029 Identities = 30/32 (93%) Strand = Plus / Minus Query: 327 cacgacctcccagccaggccctttcaggggga 358 |||||||||||||||||| |||||||| |||| Sbjct: 437 cacgacctcccagccaggacctttcagcggga 406
>gb|AF219271.1|AF219271 HIV-1 isolate FIN93167 from Finland vpu protein (vpu) and envelope glycoprotein (env) genes, complete cds; and nef protein (nef) gene, partial cds Length = 3090 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 412 atcaccttcaggaggtcctcgtcgctg 438 |||||||| |||||||||||||||||| Sbjct: 57 atcaccttgaggaggtcctcgtcgctg 31
>dbj|AB009052.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MNF13 Length = 85992 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 185 tccacatcatgtcacaaaaaca 206 |||||||||||||||||||||| Sbjct: 78692 tccacatcatgtcacaaaaaca 78671
>gb|AE007258.1| Sinorhizobium meliloti 1021 plasmid pSymA section 64 of 121 of the complete plasmid sequence Length = 11835 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 367 acggcatcagcagccgcacgc 387 ||||||||||||||||||||| Sbjct: 7569 acggcatcagcagccgcacgc 7549
>ref|XM_382779.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG02603.1) partial mRNA Length = 1929 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 467 cgtcctgctcgtccctcagaa 487 ||||||||||||||||||||| Sbjct: 532 cgtcctgctcgtccctcagaa 552
>gb|AC087893.15| Homo sapiens 12 BAC RP11-423G4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 207829 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 174 cctttgacatgtccacatcat 194 ||||||||||||||||||||| Sbjct: 104352 cctttgacatgtccacatcat 104332
>gb|AY371155.1| HIV-1 isolate 01CM.0009BBY from Cameroon gag protein (gag) and pol protein (pol) genes, partial cds; vif protein (vif), vpr protein (vpr), tat protein (tat), rev protein (rev), vpu protein (vpu), and envelope glycoprotein (env) genes, complete cds; and nef protein (nef) gene, partial cds Length = 8421 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 415 accttcaggaggtcctcgtcgctg 438 ||||| |||||||||||||||||| Sbjct: 5211 accttgaggaggtcctcgtcgctg 5188
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 catgccgccgccagcagcca 325 |||||||||||||||||||| Sbjct: 715682 catgccgccgccagcagcca 715701
>gb|AF470079.1| Zea mays P-type R2R3 Myb protein (Myb20) gene, partial cds Length = 1012 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 369 ggcatcagcagccgcacgcg 388 |||||||||||||||||||| Sbjct: 976 ggcatcagcagccgcacgcg 995
>emb|AL450104.14| Human DNA sequence from clone RP11-93N17 on chromosome 1 Contains the 5' end of a novel gene (KIAA1078) and the 3' end of ribosomal protein L34 pseudogene 1 (RPL34P1) and a CpG island, complete sequence Length = 154879 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 464 cctcgtcctgctcgtccctc 483 |||||||||||||||||||| Sbjct: 30446 cctcgtcctgctcgtccctc 30465
>emb|AL158817.11| Human DNA sequence from clone RP3-429O6 on chromosome 6 Contains part of a novel gene and a CpG island, complete sequence Length = 120529 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 448 tggatcatcctgtcttcctc 467 |||||||||||||||||||| Sbjct: 96976 tggatcatcctgtcttcctc 96995
>emb|BX883048.1| Rattus norvegicus chromosome 20, major histocompatibility complex, assembled from 40 BACs, strain Brown Norway (BN/ssNHsd), RT1n haplotype; segment 7/11 Length = 349943 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 453 catcctgtcttcctcgtcctgctc 476 ||||||||||||||| |||||||| Sbjct: 293903 catcctgtcttcctcctcctgctc 293880
>emb|AL596256.14| Mouse DNA sequence from clone RP23-259D24 on chromosome 11, complete sequence Length = 169405 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 487 agcgccagcagctctccctc 506 |||||||||||||||||||| Sbjct: 156165 agcgccagcagctctccctc 156184
>gb|U97663.1|CRU97663 Chlamydomonas reinhardtii phosphatidylinositol 3-kinase gene, partial cds Length = 4877 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 gccgccgccagcagccaaca 328 |||||||||||||||||||| Sbjct: 2200 gccgccgccagcagccaaca 2181
>emb|CT025563.11| Mouse DNA sequence from clone RP23-472D20 on chromosome 14, complete sequence Length = 174286 Score = 40.1 bits (20), Expect = 7.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 439 atgtctgtctggatcatcctgtcttcct 466 |||| |||||||||||| |||||||||| Sbjct: 87867 atgtgtgtctggatcatgctgtcttcct 87894
>gb|DQ289010.1| Trichoderma caribbaeum strain Dis 320c translation elongation factor 1 alpha (tef1) gene, partial sequence Length = 509 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 175 ctttgacatgtccacatcat 194 |||||||||||||||||||| Sbjct: 443 ctttgacatgtccacatcat 462 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,409,268 Number of Sequences: 3902068 Number of extensions: 3409268 Number of successful extensions: 65362 Number of sequences better than 10.0: 63 Number of HSP's better than 10.0 without gapping: 63 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 65067 Number of HSP's gapped (non-prelim): 295 length of query: 519 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 496 effective length of database: 17,143,297,704 effective search space: 8503075661184 effective search space used: 8503075661184 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
