| Clone Name | rbags12g06 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 305 bits (154), Expect = 1e-79 Identities = 322/378 (85%) Strand = Plus / Minus Query: 304 gtcaagccttggatgtcttctgatttggtttgaaaacgtttttgatcagcgactccttga 363 ||||||||||||| |||||||||||||| |||||||| | | | ||| || ||||||| Sbjct: 27731238 gtcaagccttggacgtcttctgatttggcttgaaaacataccttaccagagaatccttga 27731179 Query: 364 ttgacagaagttctgggaactccgttttcaatttaacagtgtcaagttcattgttgctcc 423 |||||| ||||||||| || |||| |||| || | ||||| ||||| ||||| | Sbjct: 27731178 ttgacaaaagttctggaaattccgccttcagcttggtacaatcaagctcattattgcttc 27731119 Query: 424 tcggtgctactatgaccttggcttgctcctccaagttgaagttcttccaggagaagtttg 483 ||||||| ||||||||||||||||||||||||| | | ||||||||||| || || || | Sbjct: 27731118 tcggtgcaactatgaccttggcttgctcctccagggtaaagttcttccaagaaaaattcg 27731059 Query: 484 gatcgatgtaatccctgtacatctccagtatctcattgtggctcaccacaccaggattag 543 |||| ||||||||||| ||||| |||| ||| ||||||||||||||||| |||||||||| Sbjct: 27731058 gatcaatgtaatccctatacatttccaatatttcattgtggctcaccacgccaggattag 27730999 Query: 544 tgaagttccagattccggtgaggtttctcttcgccatctcaattgagatgggaagaagtt 603 |||| |||||||| || |||||||||||||| ||||| || |||||||| |||||||| | Sbjct: 27730998 tgaaattccagatcccagtgaggtttctctttgccatttcgattgagataggaagaagct 27730939 Query: 604 catccaatattgtcattgaatttgggatatccacaaccttatcataccgggtgatctttg 663 ||||||||||||||||||||||||| ||||| || || ||||||||||||| ||| || | Sbjct: 27730938 catccaatattgtcattgaatttggtatatcaaccactttatcataccgggcgattttag 27730879 Query: 664 tgatgaaattgcgaggat 681 ||||||| |||||||||| Sbjct: 27730878 tgatgaagttgcgaggat 27730861 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 aggatacaatagcaacacca 100 |||||||||||||||||||| Sbjct: 18542704 aggatacaatagcaacacca 18542723
>dbj|AP005823.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0663F07 Length = 159046 Score = 305 bits (154), Expect = 1e-79 Identities = 322/378 (85%) Strand = Plus / Minus Query: 304 gtcaagccttggatgtcttctgatttggtttgaaaacgtttttgatcagcgactccttga 363 ||||||||||||| |||||||||||||| |||||||| | | | ||| || ||||||| Sbjct: 16571 gtcaagccttggacgtcttctgatttggcttgaaaacataccttaccagagaatccttga 16512 Query: 364 ttgacagaagttctgggaactccgttttcaatttaacagtgtcaagttcattgttgctcc 423 |||||| ||||||||| || |||| |||| || | ||||| ||||| ||||| | Sbjct: 16511 ttgacaaaagttctggaaattccgccttcagcttggtacaatcaagctcattattgcttc 16452 Query: 424 tcggtgctactatgaccttggcttgctcctccaagttgaagttcttccaggagaagtttg 483 ||||||| ||||||||||||||||||||||||| | | ||||||||||| || || || | Sbjct: 16451 tcggtgcaactatgaccttggcttgctcctccagggtaaagttcttccaagaaaaattcg 16392 Query: 484 gatcgatgtaatccctgtacatctccagtatctcattgtggctcaccacaccaggattag 543 |||| ||||||||||| ||||| |||| ||| ||||||||||||||||| |||||||||| Sbjct: 16391 gatcaatgtaatccctatacatttccaatatttcattgtggctcaccacgccaggattag 16332 Query: 544 tgaagttccagattccggtgaggtttctcttcgccatctcaattgagatgggaagaagtt 603 |||| |||||||| || |||||||||||||| ||||| || |||||||| |||||||| | Sbjct: 16331 tgaaattccagatcccagtgaggtttctctttgccatttcgattgagataggaagaagct 16272 Query: 604 catccaatattgtcattgaatttgggatatccacaaccttatcataccgggtgatctttg 663 ||||||||||||||||||||||||| ||||| || || ||||||||||||| ||| || | Sbjct: 16271 catccaatattgtcattgaatttggtatatcaaccactttatcataccgggcgattttag 16212 Query: 664 tgatgaaattgcgaggat 681 ||||||| |||||||||| Sbjct: 16211 tgatgaagttgcgaggat 16194
>dbj|AP005775.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0005A04 Length = 140723 Score = 305 bits (154), Expect = 1e-79 Identities = 322/378 (85%) Strand = Plus / Minus Query: 304 gtcaagccttggatgtcttctgatttggtttgaaaacgtttttgatcagcgactccttga 363 ||||||||||||| |||||||||||||| |||||||| | | | ||| || ||||||| Sbjct: 117104 gtcaagccttggacgtcttctgatttggcttgaaaacataccttaccagagaatccttga 117045 Query: 364 ttgacagaagttctgggaactccgttttcaatttaacagtgtcaagttcattgttgctcc 423 |||||| ||||||||| || |||| |||| || | ||||| ||||| ||||| | Sbjct: 117044 ttgacaaaagttctggaaattccgccttcagcttggtacaatcaagctcattattgcttc 116985 Query: 424 tcggtgctactatgaccttggcttgctcctccaagttgaagttcttccaggagaagtttg 483 ||||||| ||||||||||||||||||||||||| | | ||||||||||| || || || | Sbjct: 116984 tcggtgcaactatgaccttggcttgctcctccagggtaaagttcttccaagaaaaattcg 116925 Query: 484 gatcgatgtaatccctgtacatctccagtatctcattgtggctcaccacaccaggattag 543 |||| ||||||||||| ||||| |||| ||| ||||||||||||||||| |||||||||| Sbjct: 116924 gatcaatgtaatccctatacatttccaatatttcattgtggctcaccacgccaggattag 116865 Query: 544 tgaagttccagattccggtgaggtttctcttcgccatctcaattgagatgggaagaagtt 603 |||| |||||||| || |||||||||||||| ||||| || |||||||| |||||||| | Sbjct: 116864 tgaaattccagatcccagtgaggtttctctttgccatttcgattgagataggaagaagct 116805 Query: 604 catccaatattgtcattgaatttgggatatccacaaccttatcataccgggtgatctttg 663 ||||||||||||||||||||||||| ||||| || || ||||||||||||| ||| || | Sbjct: 116804 catccaatattgtcattgaatttggtatatcaaccactttatcataccgggcgattttag 116745 Query: 664 tgatgaaattgcgaggat 681 ||||||| |||||||||| Sbjct: 116744 tgatgaagttgcgaggat 116727
>dbj|AK071766.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023111H09, full insert sequence Length = 1447 Score = 305 bits (154), Expect = 1e-79 Identities = 322/378 (85%) Strand = Plus / Minus Query: 304 gtcaagccttggatgtcttctgatttggtttgaaaacgtttttgatcagcgactccttga 363 ||||||||||||| |||||||||||||| |||||||| | | | ||| || ||||||| Sbjct: 1051 gtcaagccttggacgtcttctgatttggcttgaaaacataccttaccagagaatccttga 992 Query: 364 ttgacagaagttctgggaactccgttttcaatttaacagtgtcaagttcattgttgctcc 423 |||||| ||||||||| || |||| |||| || | ||||| ||||| ||||| | Sbjct: 991 ttgacaaaagttctggaaattccgccttcagcttggtacaatcaagctcattattgcttc 932 Query: 424 tcggtgctactatgaccttggcttgctcctccaagttgaagttcttccaggagaagtttg 483 ||||||| ||||||||||||||||||||||||| | | ||||||||||| || || || | Sbjct: 931 tcggtgcaactatgaccttggcttgctcctccagggtaaagttcttccaagaaaaattcg 872 Query: 484 gatcgatgtaatccctgtacatctccagtatctcattgtggctcaccacaccaggattag 543 |||| ||||||||||| ||||| |||| ||| ||||||||||||||||| |||||||||| Sbjct: 871 gatcaatgtaatccctatacatttccaatatttcattgtggctcaccacgccaggattag 812 Query: 544 tgaagttccagattccggtgaggtttctcttcgccatctcaattgagatgggaagaagtt 603 |||| |||||||| || |||||||||||||| ||||| || |||||||| |||||||| | Sbjct: 811 tgaaattccagatcccagtgaggtttctctttgccatttcgattgagataggaagaagct 752 Query: 604 catccaatattgtcattgaatttgggatatccacaaccttatcataccgggtgatctttg 663 ||||||||||||||||||||||||| ||||| || || ||||||||||||| ||| || | Sbjct: 751 catccaatattgtcattgaatttggtatatcaaccactttatcataccgggcgattttag 692 Query: 664 tgatgaaattgcgaggat 681 ||||||| |||||||||| Sbjct: 691 tgatgaagttgcgaggat 674
>gb|AF051236.1|AF051236 Picea mariana hypothetical protein (Sb50) mRNA, partial cds Length = 1139 Score = 121 bits (61), Expect = 3e-24 Identities = 199/245 (81%) Strand = Plus / Minus Query: 435 atgaccttggcttgctcctccaagttgaagttcttccaggagaagtttggatcgatgtaa 494 ||||||||||| |||||||||| | |||| ||| |||| | || | ||||||||||| Sbjct: 688 atgaccttggcctgctcctccagggtgaaattcctccaagtatagctcggatcgatgtag 629 Query: 495 tccctgtacatctccagtatctcattgtggctcaccacaccaggattagtgaagttccag 554 ||||||||||||||||| ||||| |||||||| ||||| ||||| || ||||| ||||| Sbjct: 628 tccctgtacatctccaggatctcgttgtggctaaccaccccagggttcgtgaaattccaa 569 Query: 555 attccggtgaggtttctcttcgccatctcaattgagatgggaagaagttcatccaatatt 614 ||||| || ||||| | |||||||||||| || || || || ||||| || || | || Sbjct: 568 attcctgtaaggttccgcttcgccatctctatcgaaatcggcagaagctcgtcgagaatg 509 Query: 615 gtcattgaatttgggatatccacaaccttatcataccgggtgatctttgtgatgaaattg 674 ||||| ||||| ||||| | || ||||| ||||| |||| |||||| |||||||| ||| Sbjct: 508 gtcatggaattggggatgttgacgaccttgtcatagcgggagatcttggtgatgaagttg 449 Query: 675 cgagg 679 ||||| Sbjct: 448 cgagg 444
>gb|AY088123.1| Arabidopsis thaliana clone 41505 mRNA, complete sequence Length = 1211 Score = 115 bits (58), Expect = 2e-22 Identities = 214/266 (80%) Strand = Plus / Minus Query: 405 tcaagttcattgttgctcctcggtgctactatgaccttggcttgctcctccaagttgaag 464 ||||| |||||||| ||||| || || || || || || ||||| |||||||| ||||| Sbjct: 878 tcaagctcattgttactccttggcgccacaatcactttagcttgttcctccaatgtgaag 819 Query: 465 ttcttccaggagaagtttggatcgatgtaatccctgtacatctccagtatctcattgtgg 524 |||||||| | || | || || ||||| || ||||||||||||| ||||| |||||| Sbjct: 818 ttcttccaagtaaaactcgggtcaatgtagtctctgtacatctccaagatctcgttgtgg 759 Query: 525 ctcaccacaccaggattagtgaagttccagattccggtgaggtttctcttcgccatctca 584 ||||| ||||| ||||||||||| || |||| ||||| | ||| ||||||||||| || Sbjct: 758 ctcacaacacccggattagtgaaattgtagatcccggttaagttcctcttcgccatttcg 699 Query: 585 attgagatgggaagaagttcatccaatattgtcattgaatttgggatatccacaacctta 644 ||||| || || ||||| ||||| | |||||||| || |||||||| |||||||| || Sbjct: 698 attgatatcgggagaagctcatcgaggattgtcatcgagtttgggatgtccacaactttc 639 Query: 645 tcataccgggtgatctttgtgatgaa 670 |||||||| | ||||| |||||||| Sbjct: 638 tcataccgagcaatcttcgtgatgaa 613
>ref|NM_104978.3| Arabidopsis thaliana NRS/ER (NUCLEOTIDE-RHAMNOSE SYNTHASE/EPIMERASE-REDUCTASE) AT1G63000 (NRS/ER) mRNA, complete cds Length = 1265 Score = 107 bits (54), Expect = 5e-20 Identities = 213/266 (80%) Strand = Plus / Minus Query: 405 tcaagttcattgttgctcctcggtgctactatgaccttggcttgctcctccaagttgaag 464 ||||| |||||||| ||||| || || || || || || ||||| |||||||| ||||| Sbjct: 920 tcaagctcattgttactccttggcgccacaatcactttagcttgttcctccaatgtgaag 861 Query: 465 ttcttccaggagaagtttggatcgatgtaatccctgtacatctccagtatctcattgtgg 524 |||||||| | || | || || ||||| || ||||||||||||| ||||| |||||| Sbjct: 860 ttcttccaagtaaaactcgggtcaatgtagtctctgtacatctccaagatctcgttgtgg 801 Query: 525 ctcaccacaccaggattagtgaagttccagattccggtgaggtttctcttcgccatctca 584 ||||| ||||| || |||||||| || |||| ||||| | ||| ||||||||||| || Sbjct: 800 ctcacaacacccgggttagtgaaattgtagatcccggttaagttcctcttcgccatttcg 741 Query: 585 attgagatgggaagaagttcatccaatattgtcattgaatttgggatatccacaacctta 644 ||||| || || ||||| ||||| | |||||||| || |||||||| |||||||| || Sbjct: 740 attgatatcgggagaagctcatcgaggattgtcatcgagtttgggatgtccacaactttc 681 Query: 645 tcataccgggtgatctttgtgatgaa 670 |||||||| | ||||| |||||||| Sbjct: 680 tcataccgagcaatcttcgtgatgaa 655
>gb|AY513232.1| Arabidopsis thaliana 3,5-epimerase/4-reductase (NRS/ER) mRNA, complete cds Length = 906 Score = 107 bits (54), Expect = 5e-20 Identities = 213/266 (80%) Strand = Plus / Minus Query: 405 tcaagttcattgttgctcctcggtgctactatgaccttggcttgctcctccaagttgaag 464 ||||| |||||||| ||||| || || || || || || ||||| |||||||| ||||| Sbjct: 803 tcaagctcattgttactccttggcgccacaatcactttagcttgttcctccaatgtgaag 744 Query: 465 ttcttccaggagaagtttggatcgatgtaatccctgtacatctccagtatctcattgtgg 524 |||||||| | || | || || ||||| || ||||||||||||| ||||| |||||| Sbjct: 743 ttcttccaagtaaaactcgggtcaatgtagtctctgtacatctccaagatctcgttgtgg 684 Query: 525 ctcaccacaccaggattagtgaagttccagattccggtgaggtttctcttcgccatctca 584 ||||| ||||| || |||||||| || |||| ||||| | ||| ||||||||||| || Sbjct: 683 ctcacaacacccgggttagtgaaattgtagatcccggttaagttcctcttcgccatttcg 624 Query: 585 attgagatgggaagaagttcatccaatattgtcattgaatttgggatatccacaacctta 644 ||||| || || ||||| ||||| | |||||||| || |||||||| |||||||| || Sbjct: 623 attgatatcgggagaagctcatcgaggattgtcatcgagtttgggatgtccacaactttc 564 Query: 645 tcataccgggtgatctttgtgatgaa 670 |||||||| | ||||| |||||||| Sbjct: 563 tcataccgagcaatcttcgtgatgaa 538
>gb|AF332445.1| Arabidopsis thaliana clone C00141 (e) unknown protein (At1g63000) mRNA, complete cds Length = 906 Score = 107 bits (54), Expect = 5e-20 Identities = 213/266 (80%) Strand = Plus / Minus Query: 405 tcaagttcattgttgctcctcggtgctactatgaccttggcttgctcctccaagttgaag 464 ||||| |||||||| ||||| || || || || || || ||||| |||||||| ||||| Sbjct: 803 tcaagctcattgttactccttggcgccacaatcactttagcttgttcctccaatgtgaag 744 Query: 465 ttcttccaggagaagtttggatcgatgtaatccctgtacatctccagtatctcattgtgg 524 |||||||| | || | || || ||||| || ||||||||||||| ||||| |||||| Sbjct: 743 ttcttccaagtaaaactcgggtcaatgtagtctctgtacatctccaagatctcgttgtgg 684 Query: 525 ctcaccacaccaggattagtgaagttccagattccggtgaggtttctcttcgccatctca 584 ||||| ||||| || |||||||| || |||| ||||| | ||| ||||||||||| || Sbjct: 683 ctcacaacacccgggttagtgaaattgtagatcccggttaagttcctcttcgccatttcg 624 Query: 585 attgagatgggaagaagttcatccaatattgtcattgaatttgggatatccacaacctta 644 ||||| || || ||||| ||||| | |||||||| || |||||||| |||||||| || Sbjct: 623 attgatatcgggagaagctcatcgaggattgtcatcgagtttgggatgtccacaactttc 564 Query: 645 tcataccgggtgatctttgtgatgaa 670 |||||||| | ||||| |||||||| Sbjct: 563 tcataccgagcaatcttcgtgatgaa 538
>gb|AF387005.1|AF387005 Arabidopsis thaliana Unknown protein (F16P17.17) mRNA, complete cds Length = 1230 Score = 107 bits (54), Expect = 5e-20 Identities = 213/266 (80%) Strand = Plus / Minus Query: 405 tcaagttcattgttgctcctcggtgctactatgaccttggcttgctcctccaagttgaag 464 ||||| |||||||| ||||| || || || || || || ||||| |||||||| ||||| Sbjct: 880 tcaagctcattgttactccttggcgccacaatcactttagcttgttcctccaatgtgaag 821 Query: 465 ttcttccaggagaagtttggatcgatgtaatccctgtacatctccagtatctcattgtgg 524 |||||||| | || | || || ||||| || ||||||||||||| ||||| |||||| Sbjct: 820 ttcttccaagtaaaactcgggtcaatgtagtctctgtacatctccaagatctcgttgtgg 761 Query: 525 ctcaccacaccaggattagtgaagttccagattccggtgaggtttctcttcgccatctca 584 ||||| ||||| || |||||||| || |||| ||||| | ||| ||||||||||| || Sbjct: 760 ctcacaacacccgggttagtgaaattgtagatcccggttaagttcctcttcgccatttcg 701 Query: 585 attgagatgggaagaagttcatccaatattgtcattgaatttgggatatccacaacctta 644 ||||| || || ||||| ||||| | |||||||| || |||||||| |||||||| || Sbjct: 700 attgatatcgggagaagctcatcgaggattgtcatcgagtttgggatgtccacaactttc 641 Query: 645 tcataccgggtgatctttgtgatgaa 670 |||||||| | ||||| |||||||| Sbjct: 640 tcataccgagcaatcttcgtgatgaa 615
>emb|BX815284.1|CNS0AAH5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS49ZH01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1224 Score = 107 bits (54), Expect = 5e-20 Identities = 213/266 (80%) Strand = Plus / Minus Query: 405 tcaagttcattgttgctcctcggtgctactatgaccttggcttgctcctccaagttgaag 464 ||||| |||||||| ||||| || || || || || || ||||| |||||||| ||||| Sbjct: 920 tcaagctcattgttactccttggcgccacaatcactttagcttgttcctccaatgtgaag 861 Query: 465 ttcttccaggagaagtttggatcgatgtaatccctgtacatctccagtatctcattgtgg 524 |||||||| | || | || || ||||| || ||||||||||||| ||||| |||||| Sbjct: 860 ttcttccaagtaaaactcgggtcaatgtagtctctgtacatctccaagatctcgttgtgg 801 Query: 525 ctcaccacaccaggattagtgaagttccagattccggtgaggtttctcttcgccatctca 584 ||||| ||||| || |||||||| || |||| ||||| | ||| ||||||||||| || Sbjct: 800 ctcacaacacccgggttagtgaaattgtagatcccggttaagttcctcttcgccatttcg 741 Query: 585 attgagatgggaagaagttcatccaatattgtcattgaatttgggatatccacaacctta 644 ||||| || || ||||| ||||| | |||||||| || |||||||| |||||||| || Sbjct: 740 attgatatcgggagaagctcatcgaggattgtcatcgagtttgggatgtccacaactttc 681 Query: 645 tcataccgggtgatctttgtgatgaa 670 |||||||| | ||||| |||||||| Sbjct: 680 tcataccgagcaatcttcgtgatgaa 655
>gb|AC011000.3|F16P17 Sequence of BAC F16P17 from Arabidopsis thaliana chromosome 1, complete sequence Length = 98412 Score = 107 bits (54), Expect = 5e-20 Identities = 213/266 (80%) Strand = Plus / Minus Query: 405 tcaagttcattgttgctcctcggtgctactatgaccttggcttgctcctccaagttgaag 464 ||||| |||||||| ||||| || || || || || || ||||| |||||||| ||||| Sbjct: 70123 tcaagctcattgttactccttggcgccacaatcactttagcttgttcctccaatgtgaag 70064 Query: 465 ttcttccaggagaagtttggatcgatgtaatccctgtacatctccagtatctcattgtgg 524 |||||||| | || | || || ||||| || ||||||||||||| ||||| |||||| Sbjct: 70063 ttcttccaagtaaaactcgggtcaatgtagtctctgtacatctccaagatctcgttgtgg 70004 Query: 525 ctcaccacaccaggattagtgaagttccagattccggtgaggtttctcttcgccatctca 584 ||||| ||||| || |||||||| || |||| ||||| | ||| ||||||||||| || Sbjct: 70003 ctcacaacacccgggttagtgaaattgtagatcccggttaagttcctcttcgccatttcg 69944 Query: 585 attgagatgggaagaagttcatccaatattgtcattgaatttgggatatccacaacctta 644 ||||| || || ||||| ||||| | |||||||| || |||||||| |||||||| || Sbjct: 69943 attgatatcgggagaagctcatcgaggattgtcatcgagtttgggatgtccacaactttc 69884 Query: 645 tcataccgggtgatctttgtgatgaa 670 |||||||| | ||||| |||||||| Sbjct: 69883 tcataccgagcaatcttcgtgatgaa 69858
>gb|AF359122.1| Pinus sylvestris isolate plus tree E1101 putative dTDP-glucose 4,6-dehydratase gene, partial cds Length = 212 Score = 97.6 bits (49), Expect = 5e-17 Identities = 106/125 (84%) Strand = Plus / Minus Query: 435 atgaccttggcttgctcctccaagttgaagttcttccaggagaagtttggatcgatgtaa 494 ||||||||||| |||||||||| | |||| |||||||| | || | ||||||||||| Sbjct: 143 atgaccttggcctgctcctccagggtgaaattcttccaagtatagctcggatcgatgtag 84 Query: 495 tccctgtacatctccagtatctcattgtggctcaccacaccaggattagtgaagttccag 554 ||||||||||||||||| |||||||||||||| || || ||||| || ||||| ||||| Sbjct: 83 tccctgtacatctccaggatctcattgtggctaacaaccccagggttcgtgaaattccaa 24 Query: 555 attcc 559 ||||| Sbjct: 23 attcc 19
>gb|BT014616.1| Lycopersicon esculentum clone 134102R, mRNA sequence Length = 2345 Score = 91.7 bits (46), Expect = 3e-15 Identities = 160/198 (80%) Strand = Plus / Minus Query: 482 tggatcgatgtaatccctgtacatctccagtatctcattgtggctcaccacaccaggatt 541 ||||||||| || | | ||||||| |||| ||||||||| |||||||| ||||| || || Sbjct: 1966 tggatcgatatatttcttgtacatttccaatatctcattatggctcacaacacccgggtt 1907 Query: 542 agtgaagttccagattccggtgaggtttctcttcgccatctcaattgagatgggaagaag 601 ||||| ||||| || || |||| || | ||| |||||||||||||| || |||||||| Sbjct: 1906 tgtgaaattccatatgcctctgagattacgctttgccatctcaattgaaataggaagaag 1847 Query: 602 ttcatccaatattgtcattgaatttgggatatccacaaccttatcataccgggtgatctt 661 ||||||||||| ||||| || || |||| || ||||||| ||| ||| ||||||| Sbjct: 1846 ctcatccaatatggtcatactgttaggaatattgaccaccttattatagcggctgatctt 1787 Query: 662 tgtgatgaaattgcgagg 679 || |||||||||||||| Sbjct: 1786 ggtaatgaaattgcgagg 1769
>ref|NM_106505.3| Arabidopsis thaliana ATTPS1 (TREHALOSE-6-PHOSPHATE SYNTHASE); transferase, transferring glycosyl groups AT1G78580 (ATTPS1) mRNA, complete cds Length = 4635 Score = 89.7 bits (45), Expect = 1e-14 Identities = 90/105 (85%) Strand = Plus / Plus Query: 488 gatgtaatccctgtacatctccagtatctcattgtggctcaccacaccaggattagtgaa 547 |||||| || ||||||||||| || ||||| ||||||||||||||||| || || ||||| Sbjct: 3376 gatgtagtctctgtacatctctaggatctcgttgtggctcaccacacctgggtttgtgaa 3435 Query: 548 gttccagattccggtgaggtttctcttcgccatctcaattgagat 592 |||||||||||| | | |||||| ||||||||||| || ||||| Sbjct: 3436 gttccagattcctttcaagtttcttttcgccatctcgatggagat 3480
>ref|NM_106504.2| Arabidopsis thaliana RHM1; NAD binding / catalytic AT1G78570 (RHM1) transcript variant AT1G78570.1 mRNA, complete cds Length = 2744 Score = 89.7 bits (45), Expect = 1e-14 Identities = 90/105 (85%) Strand = Plus / Minus Query: 488 gatgtaatccctgtacatctccagtatctcattgtggctcaccacaccaggattagtgaa 547 |||||| || ||||||||||| || ||||| ||||||||||||||||| || || ||||| Sbjct: 2011 gatgtagtctctgtacatctctaggatctcgttgtggctcaccacacctgggtttgtgaa 1952 Query: 548 gttccagattccggtgaggtttctcttcgccatctcaattgagat 592 |||||||||||| | | |||||| ||||||||||| || ||||| Sbjct: 1951 gttccagattcctttcaagtttcttttcgccatctcgatggagat 1907
>ref|NM_001036220.1| Arabidopsis thaliana RHM1; NAD binding / catalytic AT1G78570 (RHM1) transcript variant AT1G78570.2 mRNA, complete cds Length = 2912 Score = 89.7 bits (45), Expect = 1e-14 Identities = 90/105 (85%) Strand = Plus / Minus Query: 488 gatgtaatccctgtacatctccagtatctcattgtggctcaccacaccaggattagtgaa 547 |||||| || ||||||||||| || ||||| ||||||||||||||||| || || ||||| Sbjct: 2145 gatgtagtctctgtacatctctaggatctcgttgtggctcaccacacctgggtttgtgaa 2086 Query: 548 gttccagattccggtgaggtttctcttcgccatctcaattgagat 592 |||||||||||| | | |||||| ||||||||||| || ||||| Sbjct: 2085 gttccagattcctttcaagtttcttttcgccatctcgatggagat 2041
>gb|AC007260.2| Arabidopsis thaliana chromosome I BAC T30F21 genomic sequence, complete sequence Length = 78378 Score = 89.7 bits (45), Expect = 1e-14 Identities = 90/105 (85%) Strand = Plus / Plus Query: 488 gatgtaatccctgtacatctccagtatctcattgtggctcaccacaccaggattagtgaa 547 |||||| || ||||||||||| || ||||| ||||||||||||||||| || || ||||| Sbjct: 38715 gatgtagtctctgtacatctctaggatctcgttgtggctcaccacacctgggtttgtgaa 38774 Query: 548 gttccagattccggtgaggtttctcttcgccatctcaattgagat 592 |||||||||||| | | |||||| ||||||||||| || ||||| Sbjct: 38775 gttccagattcctttcaagtttcttttcgccatctcgatggagat 38819
>gb|AY081471.1| Arabidopsis thaliana similar to dTDP-D-glucose 4,6-dehydratase (At1g78570) mRNA, complete cds Length = 2126 Score = 89.7 bits (45), Expect = 1e-14 Identities = 90/105 (85%) Strand = Plus / Minus Query: 488 gatgtaatccctgtacatctccagtatctcattgtggctcaccacaccaggattagtgaa 547 |||||| || ||||||||||| || ||||| ||||||||||||||||| || || ||||| Sbjct: 1836 gatgtagtctctgtacatctctaggatctcgttgtggctcaccacacctgggtttgtgaa 1777 Query: 548 gttccagattccggtgaggtttctcttcgccatctcaattgagat 592 |||||||||||| | | |||||| ||||||||||| || ||||| Sbjct: 1776 gttccagattcctttcaagtttcttttcgccatctcgatggagat 1732
>gb|AF359121.1| Pinus sylvestris isolate plus tree E635C putative dTDP-glucose 4,6-dehydratase gene, partial cds Length = 212 Score = 89.7 bits (45), Expect = 1e-14 Identities = 105/125 (84%) Strand = Plus / Minus Query: 435 atgaccttggcttgctcctccaagttgaagttcttccaggagaagtttggatcgatgtaa 494 ||||||||||| |||||||||| | |||| |||||||| | || | ||||||||||| Sbjct: 143 atgaccttggcctgctcctccagggtgaaattcttccaagtatagctcggatcgatgtag 84 Query: 495 tccctgtacatctccagtatctcattgtggctcaccacaccaggattagtgaagttccag 554 ||||||||||||||||| ||||| |||||||| || || ||||| || ||||| ||||| Sbjct: 83 tccctgtacatctccaggatctcgttgtggctaacaaccccagggttcgtgaaattccaa 24 Query: 555 attcc 559 ||||| Sbjct: 23 attcc 19
>gb|AY042833.1| Arabidopsis thaliana Similar to dTDP-D-glucose 4,6-dehydratase (T30F21.10) mRNA, complete cds Length = 2347 Score = 89.7 bits (45), Expect = 1e-14 Identities = 90/105 (85%) Strand = Plus / Minus Query: 488 gatgtaatccctgtacatctccagtatctcattgtggctcaccacaccaggattagtgaa 547 |||||| || ||||||||||| || ||||| ||||||||||||||||| || || ||||| Sbjct: 2011 gatgtagtctctgtacatctctaggatctcgttgtggctcaccacacctgggtttgtgaa 1952 Query: 548 gttccagattccggtgaggtttctcttcgccatctcaattgagat 592 |||||||||||| | | |||||| ||||||||||| || ||||| Sbjct: 1951 gttccagattcctttcaagtttcttttcgccatctcgatggagat 1907
>emb|BX815784.1|CNS0AAK8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS94ZD06 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2309 Score = 89.7 bits (45), Expect = 1e-14 Identities = 90/105 (85%) Strand = Plus / Minus Query: 488 gatgtaatccctgtacatctccagtatctcattgtggctcaccacaccaggattagtgaa 547 |||||| || ||||||||||| || ||||| ||||||||||||||||| || || ||||| Sbjct: 2012 gatgtagtctctgtacatctctaggatctcgttgtggctcaccacacctgggtttgtgaa 1953 Query: 548 gttccagattccggtgaggtttctcttcgccatctcaattgagat 592 |||||||||||| | | |||||| ||||||||||| || ||||| Sbjct: 1952 gttccagattcctttcaagtttcttttcgccatctcgatggagat 1908
>ref|NM_104228.3| Arabidopsis thaliana MUM4 (MUCILAGE-MODIFIED 4); catalytic AT1G53500 (MUM4) mRNA, complete cds Length = 2526 Score = 87.7 bits (44), Expect = 4e-14 Identities = 98/116 (84%) Strand = Plus / Minus Query: 486 tcgatgtaatccctgtacatctccagtatctcattgtggctcaccacaccaggattagtg 545 |||||||||| | |||||||||||| |||||| |||||||||||||| || || || ||| Sbjct: 2141 tcgatgtaattcttgtacatctccaatatctcgttgtggctcaccacccctgggttggtg 2082 Query: 546 aagttccagattccggtgaggtttctcttcgccatctcaattgagatgggaagaag 601 || ||||| || || | |||||||||||||||||||| || ||||| || ||||| Sbjct: 2081 aaattccatatgcctcttaggtttctcttcgccatctcgatagagattgggagaag 2026
>gb|AY328518.1| Arabidopsis thaliana putative UDP-L-rhamnose synthase MUM4 (MUM4) mRNA, complete cds Length = 2479 Score = 87.7 bits (44), Expect = 4e-14 Identities = 98/116 (84%) Strand = Plus / Minus Query: 486 tcgatgtaatccctgtacatctccagtatctcattgtggctcaccacaccaggattagtg 545 |||||||||| | |||||||||||| |||||| |||||||||||||| || || || ||| Sbjct: 2142 tcgatgtaattcttgtacatctccaatatctcgttgtggctcaccacccctgggttggtg 2083 Query: 546 aagttccagattccggtgaggtttctcttcgccatctcaattgagatgggaagaag 601 || ||||| || || | |||||||||||||||||||| || ||||| || ||||| Sbjct: 2082 aaattccatatgcctcttaggtttctcttcgccatctcgatagagattgggagaag 2027
>emb|AJ565874.1|ATH565874 Arabidopsis thaliana mRNA for putative NDP-rhamnose synthase (rhm2 gene) Length = 2004 Score = 87.7 bits (44), Expect = 4e-14 Identities = 98/116 (84%) Strand = Plus / Minus Query: 486 tcgatgtaatccctgtacatctccagtatctcattgtggctcaccacaccaggattagtg 545 |||||||||| | |||||||||||| |||||| |||||||||||||| || || || ||| Sbjct: 1832 tcgatgtaattcttgtacatctccaatatctcgttgtggctcaccacccctgggttggtg 1773 Query: 546 aagttccagattccggtgaggtttctcttcgccatctcaattgagatgggaagaag 601 || ||||| || || | |||||||||||||||||||| || ||||| || ||||| Sbjct: 1772 aaattccatatgcctcttaggtttctcttcgccatctcgatagagattgggagaag 1717
>gb|AY048277.1| Arabidopsis thaliana At1g53500/F22G10_13 mRNA, complete cds Length = 1739 Score = 87.7 bits (44), Expect = 4e-14 Identities = 98/116 (84%) Strand = Plus / Minus Query: 486 tcgatgtaatccctgtacatctccagtatctcattgtggctcaccacaccaggattagtg 545 |||||||||| | |||||||||||| |||||| |||||||||||||| || || || ||| Sbjct: 1402 tcgatgtaattcttgtacatctccaatatctcgttgtggctcaccacccctgggttggtg 1343 Query: 546 aagttccagattccggtgaggtttctcttcgccatctcaattgagatgggaagaag 601 || ||||| || || | |||||||||||||||||||| || ||||| || ||||| Sbjct: 1342 aaattccatatgcctcttaggtttctcttcgccatctcgatagagattgggagaag 1287
>emb|BX817582.1|CNS0AEDB Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL31ZC03 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 525 Score = 87.7 bits (44), Expect = 4e-14 Identities = 98/116 (84%) Strand = Plus / Minus Query: 486 tcgatgtaatccctgtacatctccagtatctcattgtggctcaccacaccaggattagtg 545 |||||||||| | |||||||||||| |||||| |||||||||||||| || || || ||| Sbjct: 146 tcgatgtaattcttgtacatctccaatatctcgttgtggctcaccacccctgggttggtg 87 Query: 546 aagttccagattccggtgaggtttctcttcgccatctcaattgagatgggaagaag 601 || ||||| || || | |||||||||||||||||||| || ||||| || ||||| Sbjct: 86 aaattccatatgcctcttaggtttctcttcgccatctcgatagagattgggagaag 31
>gb|AC024260.4|AC024260 Arabidopsis thaliana chromosome 1 BAC F22G10 genomic sequence, complete sequence Length = 111936 Score = 87.7 bits (44), Expect = 4e-14 Identities = 98/116 (84%) Strand = Plus / Minus Query: 486 tcgatgtaatccctgtacatctccagtatctcattgtggctcaccacaccaggattagtg 545 |||||||||| | |||||||||||| |||||| |||||||||||||| || || || ||| Sbjct: 104856 tcgatgtaattcttgtacatctccaatatctcgttgtggctcaccacccctgggttggtg 104797 Query: 546 aagttccagattccggtgaggtttctcttcgccatctcaattgagatgggaagaag 601 || ||||| || || | |||||||||||||||||||| || ||||| || ||||| Sbjct: 104796 aaattccatatgcctcttaggtttctcttcgccatctcgatagagattgggagaag 104741
>gb|AC018748.3|T3F20 Sequence of BAC T3F20 from Arabidopsis thaliana chromosome 1, complete sequence Length = 99960 Score = 87.7 bits (44), Expect = 4e-14 Identities = 98/116 (84%) Strand = Plus / Minus Query: 486 tcgatgtaatccctgtacatctccagtatctcattgtggctcaccacaccaggattagtg 545 |||||||||| | |||||||||||| |||||| |||||||||||||| || || || ||| Sbjct: 63762 tcgatgtaattcttgtacatctccaatatctcgttgtggctcaccacccctgggttggtg 63703 Query: 546 aagttccagattccggtgaggtttctcttcgccatctcaattgagatgggaagaag 601 || ||||| || || | |||||||||||||||||||| || ||||| || ||||| Sbjct: 63702 aaattccatatgcctcttaggtttctcttcgccatctcgatagagattgggagaag 63647
>gb|BT002264.1| Arabidopsis thaliana At1g53500/F22G10_13 mRNA, complete cds Length = 1497 Score = 87.7 bits (44), Expect = 4e-14 Identities = 98/116 (84%) Strand = Plus / Minus Query: 486 tcgatgtaatccctgtacatctccagtatctcattgtggctcaccacaccaggattagtg 545 |||||||||| | |||||||||||| |||||| |||||||||||||| || || || ||| Sbjct: 1325 tcgatgtaattcttgtacatctccaatatctcgttgtggctcaccacccctgggttggtg 1266 Query: 546 aagttccagattccggtgaggtttctcttcgccatctcaattgagatgggaagaag 601 || ||||| || || | |||||||||||||||||||| || ||||| || ||||| Sbjct: 1265 aaattccatatgcctcttaggtttctcttcgccatctcgatagagattgggagaag 1210
>ref|NM_112340.2| Arabidopsis thaliana RHM3; catalytic AT3G14790 (RHM3) mRNA, complete cds Length = 2332 Score = 85.7 bits (43), Expect = 2e-13 Identities = 91/107 (85%) Strand = Plus / Minus Query: 486 tcgatgtaatccctgtacatctccagtatctcattgtggctcaccacaccaggattagtg 545 ||||||||| | |||||||||| | |||||| |||||||||||||| || ||||| ||| Sbjct: 1976 tcgatgtaactcttgtacatctctaatatctcgttgtggctcaccactcctggattggtg 1917 Query: 546 aagttccagattccggtgaggtttctcttcgccatctcaattgagat 592 |||||||| ||||| | ||||| |||||||||||||| || ||||| Sbjct: 1916 aagttccatattccccttaggttcctcttcgccatctcgatcgagat 1870
>gb|AY142060.1| Arabidopsis thaliana At3g14790/T21E2_4 mRNA, complete cds Length = 1995 Score = 85.7 bits (43), Expect = 2e-13 Identities = 91/107 (85%) Strand = Plus / Minus Query: 486 tcgatgtaatccctgtacatctccagtatctcattgtggctcaccacaccaggattagtg 545 ||||||||| | |||||||||| | |||||| |||||||||||||| || ||||| ||| Sbjct: 1823 tcgatgtaactcttgtacatctctaatatctcgttgtggctcaccactcctggattggtg 1764 Query: 546 aagttccagattccggtgaggtttctcttcgccatctcaattgagat 592 |||||||| ||||| | ||||| |||||||||||||| || ||||| Sbjct: 1763 aagttccatattccccttaggttcctcttcgccatctcgatcgagat 1717
>gb|AY078958.1| Arabidopsis thaliana AT3g14790/T21E2_4 mRNA, complete cds Length = 2332 Score = 85.7 bits (43), Expect = 2e-13 Identities = 91/107 (85%) Strand = Plus / Minus Query: 486 tcgatgtaatccctgtacatctccagtatctcattgtggctcaccacaccaggattagtg 545 ||||||||| | |||||||||| | |||||| |||||||||||||| || ||||| ||| Sbjct: 1976 tcgatgtaactcttgtacatctctaatatctcgttgtggctcaccactcctggattggtg 1917 Query: 546 aagttccagattccggtgaggtttctcttcgccatctcaattgagat 592 |||||||| ||||| | ||||| |||||||||||||| || ||||| Sbjct: 1916 aagttccatattccccttaggttcctcttcgccatctcgatcgagat 1870
>dbj|AP002061.1| Arabidopsis thaliana genomic DNA, chromosome 3, BAC clone: T21E2 Length = 47466 Score = 85.7 bits (43), Expect = 2e-13 Identities = 91/107 (85%) Strand = Plus / Minus Query: 486 tcgatgtaatccctgtacatctccagtatctcattgtggctcaccacaccaggattagtg 545 ||||||||| | |||||||||| | |||||| |||||||||||||| || ||||| ||| Sbjct: 10201 tcgatgtaactcttgtacatctctaatatctcgttgtggctcaccactcctggattggtg 10142 Query: 546 aagttccagattccggtgaggtttctcttcgccatctcaattgagat 592 |||||||| ||||| | ||||| |||||||||||||| || ||||| Sbjct: 10141 aagttccatattccccttaggttcctcttcgccatctcgatcgagat 10095
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 81.8 bits (41), Expect = 3e-12 Identities = 101/121 (83%) Strand = Plus / Minus Query: 499 tgtacatctccagtatctcattgtggctcaccacaccaggattagtgaagttccagattc 558 ||||||||||||| ||||| |||||||| || || |||||||| ||||||||||| || | Sbjct: 9420169 tgtacatctccaggatctcgttgtggctgacaaccccaggattggtgaagttccatatgc 9420110 Query: 559 cggtgaggtttctcttcgccatctcaattgagatgggaagaagttcatccaatattgtca 618 | || || | ||||||||||||||| |||||||| | ||| |||||||| ||||||| Sbjct: 9420109 ccctgcagtcccgcttcgccatctcaatggagatgggcaaaagctcatccaaaattgtca 9420050 Query: 619 t 619 | Sbjct: 9420049 t 9420049
>gb|AC083942.8| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0002D01, from chromosome 3, complete sequence Length = 187589 Score = 81.8 bits (41), Expect = 3e-12 Identities = 101/121 (83%) Strand = Plus / Minus Query: 499 tgtacatctccagtatctcattgtggctcaccacaccaggattagtgaagttccagattc 558 ||||||||||||| ||||| |||||||| || || |||||||| ||||||||||| || | Sbjct: 117569 tgtacatctccaggatctcgttgtggctgacaaccccaggattggtgaagttccatatgc 117510 Query: 559 cggtgaggtttctcttcgccatctcaattgagatgggaagaagttcatccaatattgtca 618 | || || | ||||||||||||||| |||||||| | ||| |||||||| ||||||| Sbjct: 117509 ccctgcagtcccgcttcgccatctcaatggagatgggcaaaagctcatccaaaattgtca 117450 Query: 619 t 619 | Sbjct: 117449 t 117449
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 81.8 bits (41), Expect = 3e-12 Identities = 101/121 (83%) Strand = Plus / Minus Query: 499 tgtacatctccagtatctcattgtggctcaccacaccaggattagtgaagttccagattc 558 ||||||||||||| ||||| |||||||| || || |||||||| ||||||||||| || | Sbjct: 9418290 tgtacatctccaggatctcgttgtggctgacaaccccaggattggtgaagttccatatgc 9418231 Query: 559 cggtgaggtttctcttcgccatctcaattgagatgggaagaagttcatccaatattgtca 618 | || || | ||||||||||||||| |||||||| | ||| |||||||| ||||||| Sbjct: 9418230 ccctgcagtcccgcttcgccatctcaatggagatgggcaaaagctcatccaaaattgtca 9418171 Query: 619 t 619 | Sbjct: 9418170 t 9418170
>dbj|AK103544.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033132E05, full insert sequence Length = 2499 Score = 81.8 bits (41), Expect = 3e-12 Identities = 101/121 (83%) Strand = Plus / Minus Query: 499 tgtacatctccagtatctcattgtggctcaccacaccaggattagtgaagttccagattc 558 ||||||||||||| ||||| |||||||| || || |||||||| ||||||||||| || | Sbjct: 1989 tgtacatctccaggatctcgttgtggctgacaaccccaggattggtgaagttccatatgc 1930 Query: 559 cggtgaggtttctcttcgccatctcaattgagatgggaagaagttcatccaatattgtca 618 | || || | ||||||||||||||| |||||||| | ||| |||||||| ||||||| Sbjct: 1929 ccctgcagtcccgcttcgccatctcaatggagatgggcaaaagctcatccaaaattgtca 1870 Query: 619 t 619 | Sbjct: 1869 t 1869
>dbj|AK064303.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-B05, full insert sequence Length = 1892 Score = 81.8 bits (41), Expect = 3e-12 Identities = 101/121 (83%) Strand = Plus / Minus Query: 499 tgtacatctccagtatctcattgtggctcaccacaccaggattagtgaagttccagattc 558 ||||||||||||| ||||| |||||||| || || |||||||| ||||||||||| || | Sbjct: 1380 tgtacatctccaggatctcgttgtggctgacaaccccaggattggtgaagttccatatgc 1321 Query: 559 cggtgaggtttctcttcgccatctcaattgagatgggaagaagttcatccaatattgtca 618 | || || | ||||||||||||||| |||||||| | ||| |||||||| ||||||| Sbjct: 1320 ccctgcagtcccgcttcgccatctcaatggagatgggcaaaagctcatccaaaattgtca 1261 Query: 619 t 619 | Sbjct: 1260 t 1260
>gb|AC182659.2| Populus trichocarpa clone Pop1-125A14, complete sequence Length = 75970 Score = 77.8 bits (39), Expect = 4e-11 Identities = 93/111 (83%) Strand = Plus / Minus Query: 499 tgtacatctccagtatctcattgtggctcaccacaccaggattagtgaagttccagattc 558 |||||||||||| |||||||| |||||||| |||||||| || ||||||||||| || | Sbjct: 28633 tgtacatctccaaaatctcattatggctcacaacaccagggtttgtgaagttccatatgc 28574 Query: 559 cggtgaggtttctcttcgccatctcaattgagatgggaagaagttcatcca 609 | | | ||| ||||| |||||||||||||| || || |||||||| |||| Sbjct: 28573 ctctcaagttcctctttgccatctcaattgaaataggtagaagttcgtcca 28523 Score = 48.1 bits (24), Expect = 0.038 Identities = 39/44 (88%) Strand = Plus / Minus Query: 411 tcattgttgctcctcggtgctactatgaccttggcttgctcctc 454 ||||||||||||| || || ||||| ||||||||||||||||| Sbjct: 28721 tcattgttgctccggggggcaactatcaccttggcttgctcctc 28678
>gb|AY103981.1| Zea mays PCO118173 mRNA sequence Length = 1418 Score = 73.8 bits (37), Expect = 7e-10 Identities = 166/209 (79%) Strand = Plus / Minus Query: 411 tcattgttgctcctcggtgctactatgaccttggcttgctcctccaagttgaagttcttc 470 ||||||||||| || ||||| ||||||||||||| |||||| || | ||||||| || Sbjct: 1095 tcattgttgcttctaggtgcgactatgaccttggattgctcttcgagtgtgaagttggtc 1036 Query: 471 caggagaagtttggatcgatgtaatccctgtacatctccagtatctcattgtggctcacc 530 || || | |||| |||||| | | ||||||||||||| |||||||||||||| || Sbjct: 1035 cacttaaaatcaggattgatgtatttcttgtacatctccagaatctcattgtggctgaca 976 Query: 531 acaccaggattagtgaagttccagattccggtgaggtttctcttcgccatctcaattgag 590 || ||||| || ||||||||||| || || || || | || ||||||||||| ||| Sbjct: 975 acgccagggttggtgaagttccatatgcccctgcagtcccgttttgccatctcaatggag 916 Query: 591 atgggaagaagttcatccaatattgtcat 619 ||||| ||||| |||||||| |||||||| Sbjct: 915 atgggcagaagctcatccaaaattgtcat 887
>gb|AY108467.1| Zea mays PCO142331 mRNA sequence Length = 1381 Score = 60.0 bits (30), Expect = 1e-05 Identities = 108/134 (80%) Strand = Plus / Minus Query: 486 tcgatgtaatccctgtacatctccagtatctcattgtggctcaccacaccaggattagtg 545 |||||||| | | |||||||||| || ||||| |||||||| || || || || || ||| Sbjct: 996 tcgatgtactgcttgtacatctctaggatctcgttgtggctgacgacgccggggttggtg 937 Query: 546 aagttccagattccggtgaggtttctcttcgccatctcaattgagatgggaagaagttca 605 ||||| |||| || ||||| |||||||||||||| | ||||||||| || ||||| Sbjct: 936 aagttatagatgccccgcaggttcctcttcgccatctccactgagatgggcaggagttcg 877 Query: 606 tccaatattgtcat 619 |||||||| ||||| Sbjct: 876 tccaatatcgtcat 863
>gb|BT018879.1| Zea mays clone EL01T0203E01.d mRNA sequence Length = 2108 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 573 ttcgccatctcaattgagatgggaagaagttcatccaatattgtcat 619 |||||||||||||| ||||| || ||||| |||||||| |||||||| Sbjct: 1667 ttcgccatctcaatggagataggcagaagctcatccaagattgtcat 1621
>gb|BT018012.1| Zea mays clone EL01N0528B06.c mRNA sequence Length = 1008 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 573 ttcgccatctcaattgagatgggaagaagttcatccaatattgtcat 619 |||||||||||||| ||||| || ||||| |||||||| |||||||| Sbjct: 353 ttcgccatctcaatggagataggcagaagctcatccaagattgtcat 307
>gb|AY104924.1| Zea mays PCO065449 mRNA sequence Length = 1135 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 639 accttatcataccgggtgatctttgtgatgaaattgcgaggat 681 |||||||| ||||||||||| || |||||||| |||||||||| Sbjct: 752 accttatcgtaccgggtgattttggtgatgaagttgcgaggat 710
>gb|DQ378291.1| Drosophila virilis strain Tucson 15010-1001.10 chromosome 4 fosmid 47B4, complete sequence Length = 37265 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Plus Query: 326 atttggtttgaaaacgtttttg 347 |||||||||||||||||||||| Sbjct: 14651 atttggtttgaaaacgtttttg 14672
>emb|AL772303.11| Mouse DNA sequence from clone RP23-185P20 on chromosome 2, complete sequence Length = 202001 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Plus Query: 317 tgtcttctgatttggtttgaaa 338 |||||||||||||||||||||| Sbjct: 28867 tgtcttctgatttggtttgaaa 28888
>ref|NM_196493.1| Oryza sativa (japonica cultivar-group) contains similarity to histone acetyltransferase GCN5 (OSJNBa0032I20.6), mRNA Length = 1752 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 305 tcaagccttggatgtcttctg 325 ||||||||||||||||||||| Sbjct: 1120 tcaagccttggatgtcttctg 1100
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 305 tcaagccttggatgtcttctg 325 ||||||||||||||||||||| Sbjct: 14038040 tcaagccttggatgtcttctg 14038060
>gb|AF229187.1|AF229187 Oryza sativa subsp. japonica BAC clone nbxb0032I20, complete sequence Length = 144651 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 305 tcaagccttggatgtcttctg 325 ||||||||||||||||||||| Sbjct: 54169 tcaagccttggatgtcttctg 54189
>dbj|AK111779.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023078H10, full insert sequence Length = 1691 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 305 tcaagccttggatgtcttctg 325 ||||||||||||||||||||| Sbjct: 1235 tcaagccttggatgtcttctg 1215
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 305 tcaagccttggatgtcttctg 325 ||||||||||||||||||||| Sbjct: 14046282 tcaagccttggatgtcttctg 14046302
>gb|AC153378.4| Mus musculus 6 BAC RP23-106C18 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 199980 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 446 ttgctcctccaagttgaagt 465 |||||||||||||||||||| Sbjct: 29217 ttgctcctccaagttgaagt 29198
>gb|AC133514.4| Mus musculus BAC clone RP23-212F6 from chromosome 5, complete sequence Length = 208083 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ccagttatgtgatagtacaa 29 |||||||||||||||||||| Sbjct: 151512 ccagttatgtgatagtacaa 151531
>gb|AC123844.4| Mus musculus BAC clone RP23-416P14 from chromosome 7, complete sequence Length = 198721 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 gacaagggatggtgacttcc 149 |||||||||||||||||||| Sbjct: 48446 gacaagggatggtgacttcc 48465
>gb|AC116659.3| Mus musculus BAC clone RP24-147E15 from 7, complete sequence Length = 140476 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 gacaagggatggtgacttcc 149 |||||||||||||||||||| Sbjct: 95685 gacaagggatggtgacttcc 95704
>emb|AL356358.19| Human DNA sequence from clone RP11-383C12 on chromosome Xq11.1-13.1 Contains the 3' end of the AR gene for androgen receptor (dihydrotestosterone receptor; testicular feminization; spinal and bulbar muscular atrophy; Kennedy disease) and a B lymphoma Mo-MLV insertion region (mouse) (BMI1) pseudogene, complete sequence Length = 161417 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 609 aatattgtcattgaatttgg 628 |||||||||||||||||||| Sbjct: 25866 aatattgtcattgaatttgg 25847
>gb|AC008009.5| Homo sapiens 3 BAC RP11-436A20 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 212349 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 655 tgatctttgtgatgaaattg 674 |||||||||||||||||||| Sbjct: 193588 tgatctttgtgatgaaattg 193569
>emb|CR533575.5| Zebrafish DNA sequence from clone CH211-215M13 in linkage group 16, complete sequence Length = 115032 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 499 tgtacatctccagtatctcattgt 522 |||||||||||||| ||||||||| Sbjct: 26279 tgtacatctccagtttctcattgt 26256
>emb|AL627362.2|CNS07TIX DNA centromeric region sequence from BAC DP15B03, DP38F06 of chromosome 5 of Podospora anserina Length = 156244 Score = 40.1 bits (20), Expect = 9.3 Identities = 32/36 (88%) Strand = Plus / Plus Query: 438 accttggcttgctcctccaagttgaagttcttccag 473 ||||||||||||||||| | | | |||||||||||| Sbjct: 61190 accttggcttgctcctcgaggctaaagttcttccag 61225
>emb|AL161500.2|ATCHRIV12 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 12 Length = 199759 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 327 tttggtttgaaaacgtttttgatc 350 |||||| ||||||||||||||||| Sbjct: 147969 tttggtatgaaaacgtttttgatc 147992
>gb|AY279847.1| Pteragogus cryptus Tmo-4C4 (Tmo-4C4) gene, partial cds Length = 475 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 taatgacaagggatggtgac 145 |||||||||||||||||||| Sbjct: 114 taatgacaagggatggtgac 133
>ref|NM_072424.3| Caenorhabditis elegans F09G2.9 (F09G2.9) mRNA, complete cds Length = 1846 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 584 aattgagatgggaagaagtt 603 |||||||||||||||||||| Sbjct: 1438 aattgagatgggaagaagtt 1419
>gb|AF026215.1| Caenorhabditis elegans cosmid F09G2, complete sequence Length = 41087 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 584 aattgagatgggaagaagtt 603 |||||||||||||||||||| Sbjct: 29680 aattgagatgggaagaagtt 29699
>gb|AC128737.4| Mus musculus BAC clone RP23-99A8 from chromosome unknown, complete sequence Length = 211960 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 tataagaaactatctcctgc 169 |||||||||||||||||||| Sbjct: 157626 tataagaaactatctcctgc 157645
>gb|AC155653.4| Mus musculus 6 BAC RP24-503P15 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 136868 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 446 ttgctcctccaagttgaagt 465 |||||||||||||||||||| Sbjct: 1806 ttgctcctccaagttgaagt 1825
>emb|BX649615.6| Mouse DNA sequence from clone RP23-273I8 on chromosome X, complete sequence Length = 88938 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 tataagaaactatctcctgc 169 |||||||||||||||||||| Sbjct: 76626 tataagaaactatctcctgc 76607
>dbj|AP005299.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1789_D08 Length = 128673 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 aggatacaatagcaacacca 100 |||||||||||||||||||| Sbjct: 83843 aggatacaatagcaacacca 83862
>gb|AF076243.1|AF076243 Arabidopsis thaliana BAC T26N6 from chromosome IV at 19.3 cM, complete sequence Length = 99384 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 327 tttggtttgaaaacgtttttgatc 350 |||||| ||||||||||||||||| Sbjct: 47623 tttggtatgaaaacgtttttgatc 47646
>gb|AC006227.1|AC006227 Homo sapiens, clone hRPK.16_A_1, complete sequence Length = 153337 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 295 ctccatttggtcaagccttg 314 |||||||||||||||||||| Sbjct: 46501 ctccatttggtcaagccttg 46520
>gb|AY509272.1| Uncultured Flavobacteriales bacterium clone LiUU-3-244 16S ribosomal RNA gene, partial sequence Length = 724 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 104 ggtgttctgtgtaataatct 123 |||||||||||||||||||| Sbjct: 680 ggtgttctgtgtaataatct 661
>gb|AC164420.4| Mus musculus chromosome 8, clone RP24-388L13, complete sequence Length = 174120 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 440 cttggcttgctcctccaagt 459 |||||||||||||||||||| Sbjct: 12112 cttggcttgctcctccaagt 12093
>gb|AC140446.5| Mus musculus BAC clone RP24-114J11 from chromosome 8, complete sequence Length = 152392 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 440 cttggcttgctcctccaagt 459 |||||||||||||||||||| Sbjct: 80394 cttggcttgctcctccaagt 80375
>gb|AC127693.4| Mus musculus BAC clone RP23-135G19 from 17, complete sequence Length = 223894 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 364 ttgacagaagttctgggaac 383 |||||||||||||||||||| Sbjct: 125189 ttgacagaagttctgggaac 125208 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,863,890 Number of Sequences: 3902068 Number of extensions: 5863890 Number of successful extensions: 139174 Number of sequences better than 10.0: 74 Number of HSP's better than 10.0 without gapping: 75 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 138740 Number of HSP's gapped (non-prelim): 430 length of query: 681 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 658 effective length of database: 17,143,297,704 effective search space: 11280289889232 effective search space used: 11280289889232 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)