>ref|XM_476026.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1422

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 57/66 (86%), Gaps = 3/66 (4%)
 Strand = Plus / Minus

                                                                       
Query: 411 aagaagtacatcagcacatatc---gagattccgtatcatccctttagctttgttcaatt 467
           |||||||||||||| |||||||   |||||||| | ||||||||   |||||||||||||
Sbjct: 620 aagaagtacatcagtacatatccaagagattccatgtcatccctccggctttgttcaatt 561

                 
Query: 468 ccaaga 473
           ||||||
Sbjct: 560 ccaaga 555

>dbj|AK111994.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-D10, full
           insert sequence
          Length = 2161

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 57/66 (86%), Gaps = 3/66 (4%)
 Strand = Plus / Minus

                                                                       
Query: 411 aagaagtacatcagcacatatc---gagattccgtatcatccctttagctttgttcaatt 467
           |||||||||||||| |||||||   |||||||| | ||||||||   |||||||||||||
Sbjct: 805 aagaagtacatcagtacatatccaagagattccatgtcatccctccggctttgttcaatt 746

                 
Query: 468 ccaaga 473
           ||||||
Sbjct: 745 ccaaga 740

>dbj|AK111911.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033124M05, full
           insert sequence
          Length = 2164

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 57/66 (86%), Gaps = 3/66 (4%)
 Strand = Plus / Minus

                                                                       
Query: 411 aagaagtacatcagcacatatc---gagattccgtatcatccctttagctttgttcaatt 467
           |||||||||||||| |||||||   |||||||| | ||||||||   |||||||||||||
Sbjct: 811 aagaagtacatcagtacatatccaagagattccatgtcatccctccggctttgttcaatt 752

                 
Query: 468 ccaaga 473
           ||||||
Sbjct: 751 ccaaga 746

>gb|AC025031.30| Homo sapiens 12 BAC RP11-474P2 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 223675

 Score = 48.1 bits (24), Expect = 0.036
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                             
Query: 153   cagtcacaagacttgccgctgcagagcagctg 184
             ||||||||||||||||||| ||||||| ||||
Sbjct: 47917 cagtcacaagacttgccgcagcagagccgctg 47886

>emb|AJ330272.1|HSA330272 Homo sapiens genomic sequence surrounding NotI site, clone
           NL1-FB11R
          Length = 762

 Score = 48.1 bits (24), Expect = 0.036
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 153 cagtcacaagacttgccgctgcagagcagctg 184
           ||||||||||||||||||| ||||||| ||||
Sbjct: 219 cagtcacaagacttgccgcagcagagccgctg 188

>ref|XM_424918.1| PREDICTED: Gallus gallus similar to endothelial differentiation,
            lysophosphatidic acid G-protein-coupled receptor, 2
            (LOC427339), mRNA
          Length = 1911

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 299  agtggtcgttgctgtggacgcc 320
            ||||||||||||||||||||||
Sbjct: 1210 agtggtcgttgctgtggacgcc 1189

>ref|XM_460480.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0F02959g)
           partial mRNA
          Length = 444

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 276 ggcatgagcatcagagaaggag 297
           ||||||||||||||||||||||
Sbjct: 54  ggcatgagcatcagagaaggag 33

>emb|AL445219.14| Human DNA sequence from clone RP11-71L7 on chromosome 13 Contains a
             novel gene, complete sequence
          Length = 103728

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 43    ttacaatatgcaaccattacac 64
             ||||||||||||||||||||||
Sbjct: 10796 ttacaatatgcaaccattacac 10775

>emb|CR382138.1| Debaryomyces hansenii chromosome F of strain CBS767 of Debaryomyces
              hansenii
          Length = 2336804

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 276    ggcatgagcatcagagaaggag 297
              ||||||||||||||||||||||
Sbjct: 227504 ggcatgagcatcagagaaggag 227525

>emb|BX901941.5| Mouse DNA sequence from clone RP23-344H22 on chromosome X, complete
             sequence
          Length = 138091

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 145   ttcagttgcagtcacaagactt 166
             ||||||||||||||||||||||
Sbjct: 77973 ttcagttgcagtcacaagactt 77952

>emb|BX935575.1| Gallus gallus finished cDNA, clone ChEST80i12
          Length = 1962

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 299  agtggtcgttgctgtggacgcc 320
            ||||||||||||||||||||||
Sbjct: 1260 agtggtcgttgctgtggacgcc 1239

>emb|AL808134.17| Mouse DNA sequence from clone RP23-135E1 on chromosome X, complete
              sequence
          Length = 195763

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 145    ttcagttgcagtcacaagactt 166
              ||||||||||||||||||||||
Sbjct: 135645 ttcagttgcagtcacaagactt 135624

>emb|BX530025.6| Mouse DNA sequence from clone RP23-14E18 on chromosome X, complete
              sequence
          Length = 104719

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 145    ttcagttgcagtcacaagactt 166
              ||||||||||||||||||||||
Sbjct: 101780 ttcagttgcagtcacaagactt 101801

>gb|AY622311.1| Rhodotorula glutinis thymine dioxygenase mRNA, complete cds
          Length = 1148

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 325 tgagcaggcgaaggttgtgcg 345
           |||||||||||||||||||||
Sbjct: 651 tgagcaggcgaaggttgtgcg 631

>gb|AY104400.1| Zea mays PCO130354 mRNA sequence
          Length = 1216

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 410  taagaagtacatcagcacata 430
            |||||||||||||||||||||
Sbjct: 1119 taagaagtacatcagcacata 1099

>gb|AC102343.8| Mus musculus chromosome 3, clone RP23-254H18, complete sequence
          Length = 220876

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 606   taataatatttacatgtatg 625
             ||||||||||||||||||||
Sbjct: 52610 taataatatttacatgtatg 52591

>gb|AC107734.13| Mus musculus chromosome 7, clone RP23-399E4, complete sequence
          Length = 198485

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 278    catgagcatcagagaaggag 297
              ||||||||||||||||||||
Sbjct: 141700 catgagcatcagagaaggag 141719

>gb|AC124115.10| Mus musculus chromosome 10, clone RP24-377E13, complete sequence
          Length = 165796

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 605    ataataatatttacatgtat 624
              ||||||||||||||||||||
Sbjct: 155796 ataataatatttacatgtat 155777

>gb|AC102654.7| Mus musculus chromosome 1, clone RP23-2K13, complete sequence
          Length = 245404

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 92     caaataaataagcaaaacct 111
              ||||||||||||||||||||
Sbjct: 171458 caaataaataagcaaaacct 171477

>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 208    tctccagaccatactcgcgc 227
              ||||||||||||||||||||
Sbjct: 845490 tctccagaccatactcgcgc 845509

>gb|AC125583.3| Rattus norvegicus 4 BAC CH230-1A7 (Children's Hospital Oakland Research
             Institute) complete sequence
          Length = 205786

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 607   aataatatttacatgtatga 626
             ||||||||||||||||||||
Sbjct: 59079 aataatatttacatgtatga 59098

>ref|XM_654005.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN1493.2), mRNA
          Length = 597

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 191 cgtgccatcgtcgaggctct 210
           ||||||||||||||||||||
Sbjct: 108 cgtgccatcgtcgaggctct 89

>gb|AC163023.4| Mus musculus chromosome 3, clone RP24-247E19, complete sequence
          Length = 166206

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 606   taataatatttacatgtatg 625
             ||||||||||||||||||||
Sbjct: 97538 taataatatttacatgtatg 97519

>gb|AC103968.11| Homo sapiens chromosome 15, clone RP11-719C20, complete sequence
          Length = 162470

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 509   gttctctctgattgtttggt 528
             ||||||||||||||||||||
Sbjct: 20608 gttctctctgattgtttggt 20627

>ref|XM_649599.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (46.t00016)
           partial mRNA
          Length = 1170

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 573 actcaattctcttcaagtatatca 596
           |||||||||||||||| |||||||
Sbjct: 631 actcaattctcttcaattatatca 654

>gb|AC094253.7| Rattus norvegicus 4 BAC CH230-3E12 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 209550

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 607    aataatatttacatgtatga 626
              ||||||||||||||||||||
Sbjct: 150369 aataatatttacatgtatga 150388

>gb|AC095532.8| Rattus norvegicus 18 BAC CH230-8E4 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 227576

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 96     taaataagcaaaaccttaac 115
              ||||||||||||||||||||
Sbjct: 207825 taaataagcaaaaccttaac 207806

>emb|BX842574.1| Mycobacterium tuberculosis H37Rv complete genome; segment 3/13
          Length = 349564

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 208    tctccagaccatactcgcgc 227
              ||||||||||||||||||||
Sbjct: 159076 tctccagaccatactcgcgc 159095

>emb|BX248336.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 3/14
          Length = 320050

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 208    tctccagaccatactcgcgc 227
              ||||||||||||||||||||
Sbjct: 178539 tctccagaccatactcgcgc 178558

>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 355    ccacgagtcgcagcagccgc 374
              ||||||||||||||||||||
Sbjct: 937415 ccacgagtcgcagcagccgc 937396

>gb|AC153932.10| Mus musculus 10 BAC RP24-266J23 (Roswell Park Cancer Institute
             (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 162628

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 605   ataataatatttacatgtat 624
             ||||||||||||||||||||
Sbjct: 28139 ataataatatttacatgtat 28120

>gb|AC151305.2| Xenopus tropicalis clone CH216-36A20, complete sequence
          Length = 72789

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 33    ctatacctggttacaatatgcaac 56
             ||||| ||||||||||||||||||
Sbjct: 70139 ctataactggttacaatatgcaac 70116

>emb|BX284616.13| Zebrafish DNA sequence from clone DKEY-192I20 in linkage group 19,
              complete sequence
          Length = 223573

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 600    aggggataataatatttaca 619
              ||||||||||||||||||||
Sbjct: 179874 aggggataataatatttaca 179893

>dbj|AB120744.1| Carassius auratus CKIaS mRNA for casein kinase I alpha S, complete
            cds
          Length = 2998

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 413  gaagtacatcagcacatatc 432
            ||||||||||||||||||||
Sbjct: 1098 gaagtacatcagcacatatc 1079

>emb|AL845457.16| Mouse DNA sequence from clone RP23-34E24 on chromosome 2, complete
              sequence
          Length = 221009

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 473    aaactcgcattatcttgatgttcc 496
              |||||||| |||||||||||||||
Sbjct: 204034 aaactcgccttatcttgatgttcc 204057

>emb|BX293540.5| Zebrafish DNA sequence from clone DKEY-255N2 in linkage group 8,
             complete sequence
          Length = 181168

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 600   aggggataataatatttaca 619
             ||||||||||||||||||||
Sbjct: 43015 aggggataataatatttaca 42996

>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 208     tctccagaccatactcgcgc 227
               ||||||||||||||||||||
Sbjct: 4683855 tctccagaccatactcgcgc 4683874

>emb|AL844537.5| Mouse DNA sequence from clone RP23-448A16 on chromosome 2, complete
             sequence
          Length = 185541

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 609   taatatttacatgtatgact 628
             ||||||||||||||||||||
Sbjct: 17097 taatatttacatgtatgact 17078


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,419,972
Number of Sequences: 3902068
Number of extensions: 6419972
Number of successful extensions: 117714
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 117513
Number of HSP's gapped (non-prelim): 198
length of query: 650
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 627
effective length of database: 17,143,297,704
effective search space: 10748847660408
effective search space used: 10748847660408
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)