Clone Information

BLAST Search Result

Clone Name	rbags12f06
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	RL6_MESCR (P34091) 60S ribosomal protein L6 (YL16-like)	236	6e-62
2	RL6B_YEAST (P05739) 60S ribosomal protein L6-B (L17) (YL16) (RP18)	171	2e-42
3	RL6A_YEAST (Q02326) 60S ribosomal protein L6-A (L17) (YL16) (RP18)	168	1e-41
4	RL6_PIG (Q2YGT9) 60S ribosomal protein L6	164	2e-40
5	RL6_BOVIN (Q58DQ3) 60S ribosomal protein L6	162	6e-40
6	RL6_MOUSE (P47911) 60S ribosomal protein L6 (TAX-responsive enha...	162	8e-40
7	RL6_CHILA (Q6QMZ4) 60S ribosomal protein L6	162	1e-39
8	RL6_RAT (P21533) 60S ribosomal protein L6 (Neoplasm-related prot...	161	2e-39
9	RL6_SCHPO (P79071) 60S ribosomal protein L6	161	2e-39
10	RL6_HUMAN (Q02878) 60S ribosomal protein L6 (TAX-responsive enha...	160	4e-39
11	RL6_CAEEL (P47991) 60S ribosomal protein L6	144	2e-34
12	RL14E_SULAC (Q4JAJ9) 50S ribosomal protein L14e	47	6e-05
13	RL14E_SULSO (Q980C1) 50S ribosomal protein L14e	45	2e-04
14	RL14E_SULTO (Q975L7) 50S ribosomal protein L14e	43	0.001
15	RL14E_PYRAE (Q8ZYB4) 50S ribosomal protein L14e	42	0.002
16	RL14E_METKA (Q8TX43) 50S ribosomal protein L14e	39	0.010
17	RL14E_AERPE (Q9YDD7) 50S ribosomal protein L14e	39	0.013
18	CYLC2_HUMAN (Q14093) Cylicin-2 (Cylicin II) (Multiple-band polyp...	38	0.023
19	RL6_ENTHI (O15595) 60S ribosomal protein L6 (Fragment)	37	0.066
20	RL14E_PYRFU (Q8U2L5) 50S ribosomal protein L14e	35	0.19
21	HSP70_MAIZE (P11143) Heat shock 70 kDa protein	34	0.33
22	RL27_CANAL (Q9P843) 60S ribosomal protein L27	34	0.33
23	Y1420_CLOAB (Q97J66) Protein CAC1420	34	0.43
24	CYL1_BOVIN (P35662) Cylicin-1 (Cylicin I) (Multiple-band polypep...	33	0.73
25	RL14E_PYRHO (P59937) 50S ribosomal protein L14e	33	0.73
26	RL14E_PYRAB (Q9UZJ5) 50S ribosomal protein L14e	33	0.73
27	RL27_YEAST (P38706) 60S ribosomal protein L27	33	0.73
28	YKF4_YEAST (P35732) Hypothetical 84.0 kDa protein in NUP120-CSE4...	32	1.3
29	RL27_RAT (P61354) 60S ribosomal protein L27	32	1.3
30	RL27_MOUSE (P61358) 60S ribosomal protein L27	32	1.3
31	RL27_HUMAN (P61353) 60S ribosomal protein L27	32	1.3
32	RL27_CHICK (P61355) 60S ribosomal protein L27	32	1.3
33	RL27_CERNI (P61357) 60S ribosomal protein L27	32	1.3
34	RL27_CANFA (Q9XSU7) 60S ribosomal protein L27	32	1.3
35	RL27_BOVIN (P61356) 60S ribosomal protein L27	32	1.3
36	PEX6_NEUCR (Q7SGP2) Peroxisomal biogenesis factor 6 (Peroxin-6)	32	1.3
37	RL27_HIPCM (P61359) 60S ribosomal protein L27	32	1.6
38	RL27_BRARE (Q7ZV82) 60S ribosomal protein L27	32	1.6
39	RL17_ICTPU (Q90YU1) 60S ribosomal protein L27	32	1.6
40	ROK1_ASHGO (Q75AE1) ATP-dependent RNA helicase ROK1 (EC 3.6.1.-)	31	2.8
41	RL14E_PYRKO (Q5JJE4) 50S ribosomal protein L14e	31	2.8
42	G6PI_MYCHJ (Q4A9F3) Glucose-6-phosphate isomerase (EC 5.3.1.9) (...	31	2.8
43	G6PI_MYCH7 (Q4A7J2) Glucose-6-phosphate isomerase (EC 5.3.1.9) (...	31	3.6
44	ENPL_CATRO (P35016) Endoplasmin homolog precursor (GRP94 homolog)	30	4.8
45	RPN2_CANGA (Q6FIP2) 26S proteasome regulatory subunit RPN2	30	4.8
46	RL27_PEA (Q05462) 60S ribosomal protein L27	30	4.8
47	RL27_CAEEL (P91914) 60S ribosomal protein L27	30	4.8
48	NAR4_HUMAN (Q93070) Ecto-ADP-ribosyltransferase 4 precursor (EC ...	30	4.8
49	ELL_MOUSE (O08856) RNA polymerase II elongation factor ELL (Elev...	30	6.2
50	YITM_BACSU (O06748) Hypothetical protein yitM precursor	30	6.2
51	CAF1A_MOUSE (Q9QWF0) Chromatin assembly factor 1 subunit A (CAF-...	30	6.2
52	GATA_CLOTE (Q891I1) Glutamyl-tRNA(Gln) amidotransferase subunit ...	30	6.2
53	ZCHC6_MOUSE (Q5BLK4) Zinc finger CCHC domain-containing protein 6	30	6.2
54	YLD2_CAEEL (Q03567) Hypothetical protein C38C10.2 in chromosome III	30	8.1
55	NAMA_LISMO (Q8Y4H1) NADPH dehydrogenase (EC 1.6.99.1) (Xenobioti...	30	8.1
56	G6PI_MYCH2 (Q600A8) Glucose-6-phosphate isomerase (EC 5.3.1.9) (...	30	8.1
57	SYF2_DEBHA (Q6BVE0) Pre-mRNA-splicing factor SYF2	30	8.1

>RL6_MESCR (P34091) 60S ribosomal protein L6 (YL16-like)|
          Length = 234

 Score =  236 bits (601), Expect = 6e-62
 Identities = 117/164 (71%), Positives = 135/164 (82%)
 Frame = -1

Query: 650 VKPRTASTRKPKPTKLRSTITPGTVLILLAGRYMGKRVVFLKQLKSGLLLITGPFKINGV 471
           VK    + RKPKPTKLR++ITPGTVLI+LAGR+ GKRVVFLKQL SGLLL+TGPFK+NGV
Sbjct: 71  VKKPLINKRKPKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLSSGLLLVTGPFKVNGV 130

Query: 470 PVRRVNQAYVIATSTKVDISGVKVEKFDDKYFARDKKARAKKTEGELFETEKEATKNLPD 291
           P+RRVNQAYVIATSTKVDISGV VEKFDDKYF +  + + KK EGE FE EK+    LP 
Sbjct: 131 PLRRVNQAYVIATSTKVDISGVNVEKFDDKYFGKKAEKKNKKGEGEFFEAEKKEVNVLPQ 190

Query: 290 FKKDDQKAIDAELIKAIDAVPDLKNYLGARFSLRDGDKPHEMTF 159
            KKDDQKA+D  L+KAI+ VP+LK YLGARFSL+ G KPHE+ F
Sbjct: 191 EKKDDQKAVDVALLKAIEGVPELKAYLGARFSLKAGMKPHELVF 234

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>RL6B_YEAST (P05739) 60S ribosomal protein L6-B (L17) (YL16) (RP18)|
          Length = 175

 Score =  171 bits (432), Expect = 2e-42
 Identities = 87/158 (55%), Positives = 114/158 (72%), Gaps = 1/158 (0%)
 Frame = -1

Query: 629 TRKP-KPTKLRSTITPGTVLILLAGRYMGKRVVFLKQLKSGLLLITGPFKINGVPVRRVN 453
           TRK  +P KLR+++ PGTVLILLAGR+ GKRVV+LK L+   LL+TGPFK+NGVP+RRVN
Sbjct: 20  TRKAVRPQKLRASLVPGTVLILLAGRFRGKRVVYLKHLEDNTLLVTGPFKVNGVPLRRVN 79

Query: 452 QAYVIATSTKVDISGVKVEKFDDKYFARDKKARAKKTEGELFETEKEATKNLPDFKKDDQ 273
             YVIATSTKV + GV VEKF+ +YFA++K  + +K E  LF   ++ TK +   + +DQ
Sbjct: 80  ARYVIATSTKVSVEGVNVEKFNVEYFAKEKLTKKEKKEANLF--PEQQTKEIKTERVEDQ 137

Query: 272 KAIDAELIKAIDAVPDLKNYLGARFSLRDGDKPHEMTF 159
           K +D  L+  I   P LK YL A FSL++GDKPH + F
Sbjct: 138 KVVDKALLAEIKKTPLLKQYLSASFSLKNGDKPHLLKF 175

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>RL6A_YEAST (Q02326) 60S ribosomal protein L6-A (L17) (YL16) (RP18)|
          Length = 175

 Score =  168 bits (426), Expect = 1e-41
 Identities = 87/158 (55%), Positives = 113/158 (71%), Gaps = 1/158 (0%)
 Frame = -1

Query: 629 TRKP-KPTKLRSTITPGTVLILLAGRYMGKRVVFLKQLKSGLLLITGPFKINGVPVRRVN 453
           TRK  +P KLR+++ PGTVLILLAGR+ GKRVV+LK L+   LLI+GPFK+NGVP+RRVN
Sbjct: 20  TRKAARPQKLRASLVPGTVLILLAGRFRGKRVVYLKHLEDNTLLISGPFKVNGVPLRRVN 79

Query: 452 QAYVIATSTKVDISGVKVEKFDDKYFARDKKARAKKTEGELFETEKEATKNLPDFKKDDQ 273
             YVIATSTKV + GV VEKF+ +YFA++K  + +K E  LF   ++  K +   + +DQ
Sbjct: 80  ARYVIATSTKVSVEGVNVEKFNVEYFAKEKLTKKEKKEANLF--PEQQNKEIKAERVEDQ 137

Query: 272 KAIDAELIKAIDAVPDLKNYLGARFSLRDGDKPHEMTF 159
           K +D  LI  I   P LK YL A FSL++GDKPH + F
Sbjct: 138 KVVDKALIAEIKKTPLLKQYLSASFSLKNGDKPHMLKF 175

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>RL6_PIG (Q2YGT9) 60S ribosomal protein L6|
          Length = 283

 Score =  164 bits (416), Expect = 2e-40
 Identities = 85/168 (50%), Positives = 120/168 (71%), Gaps = 6/168 (3%)
 Frame = -1

Query: 644 PRTASTRKPKP-----TKLRSTITPGTVLILLAGRYMGKRVVFLKQLKSGLLLITGPFKI 480
           PR   +   KP      KLR++ITPGT+LI+L GR+ GKRV+FLKQL SGLLL+TGP  +
Sbjct: 117 PRKLLSHGKKPFSKHVRKLRASITPGTILIILTGRHRGKRVIFLKQLSSGLLLVTGPLSL 176

Query: 479 NGVPVRRVNQAYVIATSTKVDISGVKV-EKFDDKYFARDKKARAKKTEGELFETEKEATK 303
           N VP+RR +Q +VIATSTK+DISGVK+ E   D YF + K  + +  EGE+F+TEKE  +
Sbjct: 177 NRVPLRRTHQKFVIATSTKIDISGVKIPEHLTDAYFKKKKLRKPRHQEGEIFDTEKEKYE 236

Query: 302 NLPDFKKDDQKAIDAELIKAIDAVPDLKNYLGARFSLRDGDKPHEMTF 159
            + + +K DQKA+D+++++ I AVP L+ YL + F+L +G  PH++ F
Sbjct: 237 -ISEQRKVDQKAVDSQILRRIKAVPQLQGYLRSVFALTNGIYPHKLVF 283

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>RL6_BOVIN (Q58DQ3) 60S ribosomal protein L6|
          Length = 286

 Score =  162 bits (411), Expect = 6e-40
 Identities = 85/168 (50%), Positives = 120/168 (71%), Gaps = 6/168 (3%)
 Frame = -1

Query: 644 PRTASTRKPKP-----TKLRSTITPGTVLILLAGRYMGKRVVFLKQLKSGLLLITGPFKI 480
           PR   +   KP      KLR++ITPGT+LI+L GR+ GKRVVFLKQL SGLLL+TGP  +
Sbjct: 120 PRKLLSHGKKPFSKHVRKLRASITPGTILIILTGRHRGKRVVFLKQLGSGLLLVTGPLSL 179

Query: 479 NGVPVRRVNQAYVIATSTKVDISGVKV-EKFDDKYFARDKKARAKKTEGELFETEKEATK 303
           N VP+RR +Q +VIATSTK+DISGVK+ E   D YF + K  + +  EGE+F+TE+E  +
Sbjct: 180 NRVPLRRTHQKFVIATSTKIDISGVKIPEHLTDTYFKKKKLRKPRHQEGEIFDTEREKYE 239

Query: 302 NLPDFKKDDQKAIDAELIKAIDAVPDLKNYLGARFSLRDGDKPHEMTF 159
            + + +K DQKA+D+++++ I AVP L+ YL + F+L +G  PH++ F
Sbjct: 240 -ITEQRKVDQKAVDSQILRRIKAVPQLQGYLRSVFALTNGIYPHKVVF 286

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>RL6_MOUSE (P47911) 60S ribosomal protein L6 (TAX-responsive enhancer|
           element-binding protein 107) (TAXREB107)
          Length = 295

 Score =  162 bits (410), Expect = 8e-40
 Identities = 88/168 (52%), Positives = 118/168 (70%), Gaps = 6/168 (3%)
 Frame = -1

Query: 644 PRTASTRKPKP-----TKLRSTITPGTVLILLAGRYMGKRVVFLKQLKSGLLLITGPFKI 480
           PR   +   KP      +LRS+ITPGTVLI+L GR+ GKRVVFLKQL SGLLL+TGP  I
Sbjct: 129 PRKLLSHGKKPFSQHVRRLRSSITPGTVLIILTGRHRGKRVVFLKQLDSGLLLVTGPLVI 188

Query: 479 NGVPVRRVNQAYVIATSTKVDISGVKVEK-FDDKYFARDKKARAKKTEGELFETEKEATK 303
           N VP+RR +Q +VIATSTKVDIS VK+ K   D YF + +  + +  EGE+F+TEKE  +
Sbjct: 189 NRVPLRRTHQKFVIATSTKVDISDVKIPKHLTDAYFKKKQLRKPRHQEGEIFDTEKEKYE 248

Query: 302 NLPDFKKDDQKAIDAELIKAIDAVPDLKNYLGARFSLRDGDKPHEMTF 159
            + + +K DQKA+D +++  I AVP L+ YL ++FSL +G  PH++ F
Sbjct: 249 -ITEQRKADQKAVDLQILPKIKAVPQLQGYLRSQFSLTNGMYPHKLVF 295

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>RL6_CHILA (Q6QMZ4) 60S ribosomal protein L6|
          Length = 287

 Score =  162 bits (409), Expect = 1e-39
 Identities = 86/168 (51%), Positives = 118/168 (70%), Gaps = 6/168 (3%)
 Frame = -1

Query: 644 PRTASTRKPKP-----TKLRSTITPGTVLILLAGRYMGKRVVFLKQLKSGLLLITGPFKI 480
           PR   +   KP      KLR++ITPGTVLI+L GR+ GKRVVFLKQL SGLLL+TGP  +
Sbjct: 121 PRKLLSHGKKPFSQHVRKLRASITPGTVLIILTGRHRGKRVVFLKQLASGLLLVTGPLNL 180

Query: 479 NGVPVRRVNQAYVIATSTKVDISGVKVEK-FDDKYFARDKKARAKKTEGELFETEKEATK 303
           N VP+RR +Q +VIATSTK+DIS VK+ K   D YF + K  + +  EGE+F+TEKE  +
Sbjct: 181 NRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYFKKKKLRKPRHQEGEIFDTEKERYQ 240

Query: 302 NLPDFKKDDQKAIDAELIKAIDAVPDLKNYLGARFSLRDGDKPHEMTF 159
            + + +K DQKA+D++++  I AVP L+ YL + F+L +G  PH++ F
Sbjct: 241 -ISEQRKVDQKAVDSQILPKIKAVPQLRGYLRSVFALTNGIYPHKLVF 287

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>RL6_RAT (P21533) 60S ribosomal protein L6 (Neoplasm-related protein C140)|
          Length = 297

 Score =  161 bits (407), Expect = 2e-39
 Identities = 87/168 (51%), Positives = 118/168 (70%), Gaps = 6/168 (3%)
 Frame = -1

Query: 644 PRTASTRKPKP-----TKLRSTITPGTVLILLAGRYMGKRVVFLKQLKSGLLLITGPFKI 480
           PR   +   KP      +LRS+ITPGTVLI+L GR+ GKRVVFLKQL SGLLL+TGP  +
Sbjct: 131 PRKLLSHGKKPFSQHVRRLRSSITPGTVLIILTGRHRGKRVVFLKQLGSGLLLVTGPLAL 190

Query: 479 NGVPVRRVNQAYVIATSTKVDISGVKVEK-FDDKYFARDKKARAKKTEGELFETEKEATK 303
           N VP+RR +Q +VIATSTKVDIS VK+ K   D YF +    + +  EGE+F+TEKE  +
Sbjct: 191 NRVPLRRTHQKFVIATSTKVDISKVKIPKHLTDAYFKKKPLRKPRHQEGEIFDTEKEKYE 250

Query: 302 NLPDFKKDDQKAIDAELIKAIDAVPDLKNYLGARFSLRDGDKPHEMTF 159
            + + +K DQKA+D++++  I AVP L+ YL ++FSL +G  PH++ F
Sbjct: 251 -ITEQRKADQKAVDSQILPKIKAVPQLQGYLRSQFSLTNGMYPHKLVF 297

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>RL6_SCHPO (P79071) 60S ribosomal protein L6|
          Length = 194

 Score =  161 bits (407), Expect = 2e-39
 Identities = 84/154 (54%), Positives = 111/154 (72%), Gaps = 1/154 (0%)
 Frame = -1

Query: 617 KPTKLRSTITPGTVLILLAGRYMGKRVVFLKQLKSGLLLITGPFKINGVPVRRVNQAYVI 438
           +PTKLR+++ PGTV ILLAGR+ GKRVV L QL+   L++TGP+K+NGVP+RRVN  YVI
Sbjct: 43  RPTKLRASLAPGTVCILLAGRFRGKRVVVLSQLED-TLVVTGPYKVNGVPIRRVNHRYVI 101

Query: 437 ATST-KVDISGVKVEKFDDKYFARDKKARAKKTEGELFETEKEATKNLPDFKKDDQKAID 261
           ATS  K+D+SGV VEKF   YFA+ K++   K + E F  E      LP  +  DQKA+D
Sbjct: 102 ATSAPKIDVSGVSVEKFTKAYFAKQKRSGPVKKD-EAFFAENAPKNALPAERIADQKAVD 160

Query: 260 AELIKAIDAVPDLKNYLGARFSLRDGDKPHEMTF 159
           A+L+ AI A+P++K YL A F+L +GD+PH M F
Sbjct: 161 AKLLPAIKAIPNMKEYLAASFALSNGDRPHLMKF 194

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>RL6_HUMAN (Q02878) 60S ribosomal protein L6 (TAX-responsive enhancer|
           element-binding protein 107) (TAXREB107)
           (Neoplasm-related protein C140)
          Length = 287

 Score =  160 bits (404), Expect = 4e-39
 Identities = 84/168 (50%), Positives = 118/168 (70%), Gaps = 6/168 (3%)
 Frame = -1

Query: 644 PRTASTRKPKP-----TKLRSTITPGTVLILLAGRYMGKRVVFLKQLKSGLLLITGPFKI 480
           PR   +   KP      KLR++ITPGT+LI+L GR+ GKRVVFLKQL SGLLL+TGP  +
Sbjct: 121 PRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFLKQLASGLLLVTGPLVL 180

Query: 479 NGVPVRRVNQAYVIATSTKVDISGVKVEK-FDDKYFARDKKARAKKTEGELFETEKEATK 303
           N VP+RR +Q +VIATSTK+DIS VK+ K   D YF + K  + +  EGE+F+TEKE  +
Sbjct: 181 NRVPLRRTHQKFVIATSTKIDISNVKIPKHLTDAYFKKKKLRKPRHQEGEIFDTEKEKYE 240

Query: 302 NLPDFKKDDQKAIDAELIKAIDAVPDLKNYLGARFSLRDGDKPHEMTF 159
            + + +K DQKA+D++++  I A+P L+ YL + F+L +G  PH++ F
Sbjct: 241 -ITEQRKIDQKAVDSQILPKIKAIPQLQGYLRSVFALTNGIYPHKLVF 287

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>RL6_CAEEL (P47991) 60S ribosomal protein L6|
          Length = 217

 Score =  144 bits (363), Expect = 2e-34
 Identities = 84/158 (53%), Positives = 109/158 (68%), Gaps = 5/158 (3%)
 Frame = -1

Query: 617 KPTKLRSTITPGTVLILLAGRYMGKRVVFLKQL-KSGLLLITGPFKINGVPVRRVNQAYV 441
           K   LR T+TPGTVLI+LAGR+ GKRVVFLKQL +SGLLL+TGP KING P+RR+ QA+V
Sbjct: 63  KTVTLRKTLTPGTVLIVLAGRHKGKRVVFLKQLPQSGLLLVTGPHKINGFPLRRIGQAFV 122

Query: 440 IATSTKVDISGVKV-EKFDDKYFARDKKARAKKTEGELFETEKEATKNLPDFKKDDQKAI 264
           IATS KV++SGVK+ E  +D+YF R  K+ A+KT   +F + K     + + +K D K +
Sbjct: 123 IATSLKVNVSGVKIPEHINDEYFKR--KSTAQKTGKNIFASGK-TEYTVSEQRKKDIKTV 179

Query: 263 DAELIKAIDAVPDLK---NYLGARFSLRDGDKPHEMTF 159
           DA ++ AI   P+ K    YLG RFSL     PH+M F
Sbjct: 180 DAPILAAIKKHPEHKFLFGYLGTRFSLGKNQYPHKMQF 217

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>RL14E_SULAC (Q4JAJ9) 50S ribosomal protein L14e|
          Length = 96

 Score = 46.6 bits (109), Expect = 6e-05
 Identities = 23/58 (39%), Positives = 35/58 (60%)
 Frame = -1

Query: 584 GTVLILLAGRYMGKRVVFLKQLKSGLLLITGPFKINGVPVRRVNQAYVIATSTKVDIS 411
           G + +   GR  GK+ V +  + S  +L+TGP +INGV  RRVN  ++  T  KV+I+
Sbjct: 7   GRICVKTRGREAGKKCVIVDIIDSNFVLVTGPKEINGVKRRRVNILHIEPTDKKVEIN 64

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>RL14E_SULSO (Q980C1) 50S ribosomal protein L14e|
          Length = 96

 Score = 45.1 bits (105), Expect = 2e-04
 Identities = 30/97 (30%), Positives = 45/97 (46%)
 Frame = -1

Query: 593 ITPGTVLILLAGRYMGKRVVFLKQLKSGLLLITGPFKINGVPVRRVNQAYVIATSTKVDI 414
           I  G + + + GR  G + V +  +    +L+TGP  I GV  RRVN  ++  T  K+DI
Sbjct: 4   IEVGRICVKVKGREAGSKCVIVDIIDDNFVLVTGPKDITGVKRRRVNILHLEPTDKKIDI 63

Query: 413 SGVKVEKFDDKYFARDKKARAKKTEGELFETEKEATK 303
                     +  A D++ + K  E  L E  KE  K
Sbjct: 64  ----------QKGASDEEVKKKLEESNLTEYMKEKIK 90

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>RL14E_SULTO (Q975L7) 50S ribosomal protein L14e|
          Length = 96

 Score = 42.7 bits (99), Expect = 0.001
 Identities = 28/94 (29%), Positives = 43/94 (45%)
 Frame = -1

Query: 584 GTVLILLAGRYMGKRVVFLKQLKSGLLLITGPFKINGVPVRRVNQAYVIATSTKVDISGV 405
           G + +   GR  GK+ V +  +    +L+TGP  +N V  RRVN  ++  T  K+DI+  
Sbjct: 7   GRICVKTRGREAGKKCVIVDIIDENFVLVTGPKDVNKVKRRRVNILHLEPTDKKIDIN-- 64

Query: 404 KVEKFDDKYFARDKKARAKKTEGELFETEKEATK 303
                     A D + + K  E  L E  K+  K
Sbjct: 65  --------KGASDDEVKKKLEEAGLIEFMKQDVK 90

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>RL14E_PYRAE (Q8ZYB4) 50S ribosomal protein L14e|
          Length = 103

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 21/57 (36%), Positives = 33/57 (57%)
 Frame = -1

Query: 584 GTVLILLAGRYMGKRVVFLKQLKSGLLLITGPFKINGVPVRRVNQAYVIATSTKVDI 414
           G V++ + GR  G++ V +  +    ++ITGP  I GV  RRVN  ++  T  K+DI
Sbjct: 8   GRVVVKVLGREAGRKAVVVDIVDENYVVITGPKPITGVKRRRVNINHIEPTDKKIDI 64

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>RL14E_METKA (Q8TX43) 50S ribosomal protein L14e|
          Length = 94

 Score = 39.3 bits (90), Expect = 0.010
 Identities = 22/60 (36%), Positives = 31/60 (51%)
 Frame = -1

Query: 593 ITPGTVLILLAGRYMGKRVVFLKQLKSGLLLITGPFKINGVPVRRVNQAYVIATSTKVDI 414
           I  G + +  AGR  GK  V +  +    ++ITGP  + GV  RR N  ++  T  KVDI
Sbjct: 5   IEVGRICVKTAGREAGKYCVVVDIVDENFVIITGPKDVTGVKRRRCNIKHLEPTPEKVDI 64

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>RL14E_AERPE (Q9YDD7) 50S ribosomal protein L14e|
          Length = 100

 Score = 38.9 bits (89), Expect = 0.013
 Identities = 19/64 (29%), Positives = 32/64 (50%)
 Frame = -1

Query: 605 LRSTITPGTVLILLAGRYMGKRVVFLKQLKSGLLLITGPFKINGVPVRRVNQAYVIATST 426
           +   +  G + +   GR  G++ V +  +    +L+TGP  + GV  RRVN  ++     
Sbjct: 1   MAKVVEVGRICVKTRGREAGRKCVIVDIIDENFVLVTGPKSLTGVRRRRVNIDHIEILDK 60

Query: 425 KVDI 414
           KVDI
Sbjct: 61  KVDI 64

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>CYLC2_HUMAN (Q14093) Cylicin-2 (Cylicin II) (Multiple-band polypeptide II)|
          Length = 348

 Score = 38.1 bits (87), Expect = 0.023
 Identities = 22/65 (33%), Positives = 34/65 (52%)
 Frame = -1

Query: 437 ATSTKVDISGVKVEKFDDKYFARDKKARAKKTEGELFETEKEATKNLPDFKKDDQKAIDA 258
           AT ++ +  G K +   DK  +   K  A ++EGE   TEK++ K   D KK    AI+ 
Sbjct: 175 ATESEDEKGGAKKDNKKDKKDSNKGKDSATESEGEKGGTEKDSKKGKKDSKKGKDSAIEL 234

Query: 257 ELIKA 243
           + +KA
Sbjct: 235 QAVKA 239

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>RL6_ENTHI (O15595) 60S ribosomal protein L6 (Fragment)|
          Length = 92

 Score = 36.6 bits (83), Expect = 0.066
 Identities = 15/27 (55%), Positives = 21/27 (77%)
 Frame = -1

Query: 608 KLRSTITPGTVLILLAGRYMGKRVVFL 528
           KLR +I PG +LI++ G+Y GK+VV L
Sbjct: 53  KLRKSIVPGAILIIVGGKYAGKKVVSL 79

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>RL14E_PYRFU (Q8U2L5) 50S ribosomal protein L14e|
          Length = 83

 Score = 35.0 bits (79), Expect = 0.19
 Identities = 19/60 (31%), Positives = 34/60 (56%)
 Frame = -1

Query: 593 ITPGTVLILLAGRYMGKRVVFLKQLKSGLLLITGPFKINGVPVRRVNQAYVIATSTKVDI 414
           I  G + +++AGR  G++VV +  +    +L+TG   +N V  RR+N  ++     K+DI
Sbjct: 4   IDVGRIAVVIAGRRAGQKVVVVDIIDKNFVLVTGA-GLNKVKRRRMNIKHIEPLPQKIDI 62

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>HSP70_MAIZE (P11143) Heat shock 70 kDa protein|
          Length = 645

 Score = 34.3 bits (77), Expect = 0.33
 Identities = 39/144 (27%), Positives = 67/144 (46%), Gaps = 2/144 (1%)
 Frame = -1

Query: 638 TASTRKPKPTKLRSTITPGTVLILLAGRYMGKRVVFLKQLKSGLLLITGPFKINGVPV-- 465
           T  T+K +     S   PG ++ +    Y G+R     + K   LL  G F+++G+P   
Sbjct: 421 TIPTKKEQVFSTYSDNQPGVLIQV----YEGERA----RTKDNNLL--GKFELSGIPPAP 470

Query: 464 RRVNQAYVIATSTKVDISGVKVEKFDDKYFARDKKARAKKTEGELFETEKEATKNLPDFK 285
           R V Q   I  +  +D++ +     +DK   +  K      +G L  +++E  K + + +
Sbjct: 471 RGVPQ---ITVTFDIDVNNILNVSAEDKTTGQKNKITITNDKGRL--SKEEIEKMVQEAE 525

Query: 284 KDDQKAIDAELIKAIDAVPDLKNY 213
           K   KA D E+ K +DA   L+NY
Sbjct: 526 K--YKAEDEEVKKKVDAKNALENY 547

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>RL27_CANAL (Q9P843) 60S ribosomal protein L27|
          Length = 136

 Score = 34.3 bits (77), Expect = 0.33
 Identities = 32/129 (24%), Positives = 52/129 (40%), Gaps = 25/129 (19%)
 Frame = -1

Query: 593 ITPGTVLILLAGRYMGKRVVFLKQLKSGL-------LLITG----PFKINGVP------- 468
           I  G V I++ GRY GK+VV +K    G         ++ G    P K+           
Sbjct: 5   IKSGKVAIVVRGRYAGKKVVIVKPHDEGTKSHPFPHAIVAGIERAPLKVTKKMDAKKVTK 64

Query: 467 -------VRRVNQAYVIATSTKVDISGVKVEKFDDKYFARDKKARAKKTEGELFETEKEA 309
                  V+ VN  +++ T   +D+   K     +      ++  AKK   + FE + +A
Sbjct: 65  RTKVKPFVKLVNYNHLMPTRYSLDVESFKSAVTSEALEEPSQREEAKKVVKKAFEEKHQA 124

Query: 308 TKNLPDFKK 282
            KN   F+K
Sbjct: 125 GKNKWFFQK 133

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>Y1420_CLOAB (Q97J66) Protein CAC1420|
          Length = 468

 Score = 33.9 bits (76), Expect = 0.43
 Identities = 22/114 (19%), Positives = 54/114 (47%)
 Frame = -1

Query: 527 KQLKSGLLLITGPFKINGVPVRRVNQAYVIATSTKVDISGVKVEKFDDKYFARDKKARAK 348
           K+ K  +L   G F + G  V ++ +A+   TS   ++  ++ ++++ K   +D   +  
Sbjct: 248 KKFKGEILSYEGTFGV-GYGVMKL-EAFSNDTSKLKELERIRKDEYESKKQEKDPYVKLA 305

Query: 347 KTEGELFETEKEATKNLPDFKKDDQKAIDAELIKAIDAVPDLKNYLGARFSLRD 186
           +     + T  EA + +PD+  ++ + +   +  ++    DL+  +G  F + D
Sbjct: 306 RESLTQYLTTGEAIEEIPDYVTEEMRDLKRGVFVSLKKFGDLRGCIGTIFPVTD 359

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>CYL1_BOVIN (P35662) Cylicin-1 (Cylicin I) (Multiple-band polypeptide I)|
          Length = 667

 Score = 33.1 bits (74), Expect = 0.73
 Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 11/98 (11%)
 Frame = -1

Query: 437 ATSTKVDISGVKVEKFDDKYFARD-KKARAKK----------TEGELFETEKEATKNLPD 291
           A ST  +    K  K D K   +D KK  AKK          +EG+  +++K++ K+  D
Sbjct: 430 AESTDAESGDSKNAKKDSKKGKKDDKKKDAKKDAVSTDADSESEGDAKKSKKDSKKDKKD 489

Query: 290 FKKDDQKAIDAELIKAIDAVPDLKNYLGARFSLRDGDK 177
            KKDDQK    +  ++ +   D ++    R S +D  K
Sbjct: 490 LKKDDQKKPAMKSKESTETESDWESKKVKRDSKKDTKK 527

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>RL14E_PYRHO (P59937) 50S ribosomal protein L14e|
          Length = 82

 Score = 33.1 bits (74), Expect = 0.73
 Identities = 18/60 (30%), Positives = 33/60 (55%)
 Frame = -1

Query: 593 ITPGTVLILLAGRYMGKRVVFLKQLKSGLLLITGPFKINGVPVRRVNQAYVIATSTKVDI 414
           I  G + +++AGR  G++ V +  +    +L+TG   +N V  RR+N  ++     K+DI
Sbjct: 4   IDVGRIAVIIAGRRAGQKCVIVDIIDKNFVLVTGA-GLNKVKRRRMNIKHLEPLPEKIDI 62

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>RL14E_PYRAB (Q9UZJ5) 50S ribosomal protein L14e|
          Length = 82

 Score = 33.1 bits (74), Expect = 0.73
 Identities = 18/60 (30%), Positives = 33/60 (55%)
 Frame = -1

Query: 593 ITPGTVLILLAGRYMGKRVVFLKQLKSGLLLITGPFKINGVPVRRVNQAYVIATSTKVDI 414
           I  G + +++AGR  G++ V +  +    +L+TG   +N V  RR+N  ++     K+DI
Sbjct: 4   IDVGRIAVIIAGRRAGQKCVIVDIIDKNFVLVTGA-GLNKVKRRRMNIKHLEPLPEKIDI 62

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>RL27_YEAST (P38706) 60S ribosomal protein L27|
          Length = 136

 Score = 33.1 bits (74), Expect = 0.73
 Identities = 31/126 (24%), Positives = 52/126 (41%), Gaps = 25/126 (19%)
 Frame = -1

Query: 584 GTVLILLAGRYMGKRVVFLKQLKSGL-------LLITG----PFKI---NGVP------- 468
           G V +++ GRY GK+VV +K    G         L+ G    P K+   +G         
Sbjct: 8   GKVAVVVRGRYAGKKVVIVKPHDEGSKSHPFGHALVAGIERYPLKVTKKHGAKKVAKRTK 67

Query: 467 ----VRRVNQAYVIATSTKVDISGVKVEKFDDKYFARDKKARAKKTEGELFETEKEATKN 300
               ++ VN  +++ T   +D+   K     + +    ++  AKK   + FE   +A KN
Sbjct: 68  IKPFIKVVNYNHLLPTRYTLDVEAFKSVVSTETFEQPSQREEAKKVVKKAFEERHQAGKN 127

Query: 299 LPDFKK 282
              F K
Sbjct: 128 QWFFSK 133

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>YKF4_YEAST (P35732) Hypothetical 84.0 kDa protein in NUP120-CSE4 intergenic|
           region
          Length = 738

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 22/70 (31%), Positives = 32/70 (45%)
 Frame = -1

Query: 464 RRVNQAYVIATSTKVDISGVKVEKFDDKYFARDKKARAKKTEGELFETEKEATKNLPDFK 285
           +++ Q  + +  T    S  + +K      A  K    KKTE  L E   E  K + D K
Sbjct: 218 KQIEQPSLSSKKTTSRTSASQPKKMSWAAIATPKPKAVKKTESPL-ENVAELKKEISDIK 276

Query: 284 KDDQKAIDAE 255
           KDDQK+  +E
Sbjct: 277 KDDQKSEASE 286

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>RL27_RAT (P61354) 60S ribosomal protein L27|
          Length = 135

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 12/26 (46%), Positives = 19/26 (73%)
 Frame = -1

Query: 587 PGTVLILLAGRYMGKRVVFLKQLKSG 510
           PG V+++LAGRY G++ V +K +  G
Sbjct: 6   PGKVVLVLAGRYSGRKAVIVKNIDDG 31

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>RL27_MOUSE (P61358) 60S ribosomal protein L27|
          Length = 135

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 12/26 (46%), Positives = 19/26 (73%)
 Frame = -1

Query: 587 PGTVLILLAGRYMGKRVVFLKQLKSG 510
           PG V+++LAGRY G++ V +K +  G
Sbjct: 6   PGKVVLVLAGRYSGRKAVIVKNIDDG 31

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>RL27_HUMAN (P61353) 60S ribosomal protein L27|
          Length = 135

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 12/26 (46%), Positives = 19/26 (73%)
 Frame = -1

Query: 587 PGTVLILLAGRYMGKRVVFLKQLKSG 510
           PG V+++LAGRY G++ V +K +  G
Sbjct: 6   PGKVVLVLAGRYSGRKAVIVKNIDDG 31

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>RL27_CHICK (P61355) 60S ribosomal protein L27|
          Length = 135

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 12/26 (46%), Positives = 19/26 (73%)
 Frame = -1

Query: 587 PGTVLILLAGRYMGKRVVFLKQLKSG 510
           PG V+++LAGRY G++ V +K +  G
Sbjct: 6   PGKVVLVLAGRYSGRKAVIVKNIDDG 31

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>RL27_CERNI (P61357) 60S ribosomal protein L27|
          Length = 135

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 12/26 (46%), Positives = 19/26 (73%)
 Frame = -1

Query: 587 PGTVLILLAGRYMGKRVVFLKQLKSG 510
           PG V+++LAGRY G++ V +K +  G
Sbjct: 6   PGKVVLVLAGRYSGRKAVIVKNIDDG 31

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>RL27_CANFA (Q9XSU7) 60S ribosomal protein L27|
          Length = 135

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 12/26 (46%), Positives = 19/26 (73%)
 Frame = -1

Query: 587 PGTVLILLAGRYMGKRVVFLKQLKSG 510
           PG V+++LAGRY G++ V +K +  G
Sbjct: 6   PGKVVLVLAGRYSGRKAVIVKNIDDG 31

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>RL27_BOVIN (P61356) 60S ribosomal protein L27|
          Length = 135

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 12/26 (46%), Positives = 19/26 (73%)
 Frame = -1

Query: 587 PGTVLILLAGRYMGKRVVFLKQLKSG 510
           PG V+++LAGRY G++ V +K +  G
Sbjct: 6   PGKVVLVLAGRYSGRKAVIVKNIDDG 31

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>PEX6_NEUCR (Q7SGP2) Peroxisomal biogenesis factor 6 (Peroxin-6)|
          Length = 1381

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 26/121 (21%), Positives = 52/121 (42%), Gaps = 1/121 (0%)
 Frame = -1

Query: 542 RVVFLKQLKSGLLLITGPFKINGVPVRRVNQAYVIATSTKVDISGVKVEKFDDKYFARDK 363
           R+   + +  G+L  T    ++ V   +  ++          ++GV  E  +D YF+  +
Sbjct: 224 RITLCEPVAQGILAPTTKIIVSRVRTSKTKRSSASGQQQGRKLNGV-AEDDEDAYFSAAE 282

Query: 362 KARAKKTEGELFETEKEATKNLPDFKKDDQKAIDAELIKAID-AVPDLKNYLGARFSLRD 186
           + R  KT  +  ET+ + T+  P   +D+    D  L + I   VP L   +  + ++  
Sbjct: 283 EDRDSKTNAQTAETDADDTEFEPQAGEDEDNLSDDSLDEIISLQVPTLPTTVTGQSTIGT 342

Query: 185 G 183
           G
Sbjct: 343 G 343

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>RL27_HIPCM (P61359) 60S ribosomal protein L27|
          Length = 135

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 12/26 (46%), Positives = 19/26 (73%)
 Frame = -1

Query: 587 PGTVLILLAGRYMGKRVVFLKQLKSG 510
           PG V+++LAGRY G++ V +K +  G
Sbjct: 6   PGKVVMVLAGRYAGRKAVIVKNIDDG 31

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>RL27_BRARE (Q7ZV82) 60S ribosomal protein L27|
          Length = 135

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 12/26 (46%), Positives = 19/26 (73%)
 Frame = -1

Query: 587 PGTVLILLAGRYMGKRVVFLKQLKSG 510
           PG V+++LAGRY G++ V +K +  G
Sbjct: 6   PGKVVMVLAGRYAGRKAVIVKNIDDG 31

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>RL17_ICTPU (Q90YU1) 60S ribosomal protein L27|
          Length = 135

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 12/26 (46%), Positives = 19/26 (73%)
 Frame = -1

Query: 587 PGTVLILLAGRYMGKRVVFLKQLKSG 510
           PG V+++LAGRY G++ V +K +  G
Sbjct: 6   PGKVVMVLAGRYAGRKAVIVKNIDDG 31

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>ROK1_ASHGO (Q75AE1) ATP-dependent RNA helicase ROK1 (EC 3.6.1.-)|
          Length = 569

 Score = 31.2 bits (69), Expect = 2.8
 Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
 Frame = +2

Query: 17  TQXKPAKQXTILLTFSLQQXIRSQVTGYKFQQQARQNTFKTQDFYQLRRSSHGACHRP*E 196
           T+    K+    + FS  Q  R+   G + + +  +   +  DF++ RRS   A  RP E
Sbjct: 8   TRGASVKKDGKQVDFSRVQSQRTARPGQRGKDEDEEQLSRELDFFRTRRSVPAAAERPAE 67

Query: 197 RTG--HQDSS 220
            TG  H+D +
Sbjct: 68  ETGDAHRDET 77

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>RL14E_PYRKO (Q5JJE4) 50S ribosomal protein L14e|
          Length = 83

 Score = 31.2 bits (69), Expect = 2.8
 Identities = 18/60 (30%), Positives = 33/60 (55%)
 Frame = -1

Query: 593 ITPGTVLILLAGRYMGKRVVFLKQLKSGLLLITGPFKINGVPVRRVNQAYVIATSTKVDI 414
           I  G + +++AGR  G++VV    +    +L+TG   +N V  RR+N  ++     +V+I
Sbjct: 4   IEVGRIAVVIAGRRAGQKVVVADIIDKNFVLVTGA-GLNKVKRRRMNVKHLEPLPERVNI 62

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>G6PI_MYCHJ (Q4A9F3) Glucose-6-phosphate isomerase (EC 5.3.1.9) (GPI)|
           (Phosphoglucose isomerase) (PGI) (Phosphohexose
           isomerase) (PHI)
          Length = 429

 Score = 31.2 bits (69), Expect = 2.8
 Identities = 17/67 (25%), Positives = 35/67 (52%)
 Frame = +3

Query: 81  EVK*QGTNFSNKLGKTHSKRRTSTNLEGHLMGLVTVPEREPGTKIVLKVRDSIDSLDQLS 260
           E+K     F N++ + H++     + + + +G    PE     + + ++R  +++L Q S
Sbjct: 10  EIKLDYQGFQNQINEFHNRINDKNSPDINFLGWNNFPEVAINPQEIARMRKIVENLHQNS 69

Query: 261 INGLLVI 281
           IN L+VI
Sbjct: 70  INVLVVI 76

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>G6PI_MYCH7 (Q4A7J2) Glucose-6-phosphate isomerase (EC 5.3.1.9) (GPI)|
           (Phosphoglucose isomerase) (PGI) (Phosphohexose
           isomerase) (PHI)
          Length = 429

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 17/67 (25%), Positives = 34/67 (50%)
 Frame = +3

Query: 81  EVK*QGTNFSNKLGKTHSKRRTSTNLEGHLMGLVTVPEREPGTKIVLKVRDSIDSLDQLS 260
           E+K     F N++ + H +     + + + +G    PE     + + ++R  +++L Q S
Sbjct: 10  EIKLDYQGFQNQINEFHKRINDKNSPDINFLGWNNFPEVAINPQEIARMRKIVENLHQNS 69

Query: 261 INGLLVI 281
           IN L+VI
Sbjct: 70  INVLVVI 76

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>ENPL_CATRO (P35016) Endoplasmin homolog precursor (GRP94 homolog)|
          Length = 817

 Score = 30.4 bits (67), Expect = 4.8
 Identities = 21/76 (27%), Positives = 35/76 (46%)
 Frame = -1

Query: 458 VNQAYVIATSTKVDISGVKVEKFDDKYFARDKKARAKKTEGELFETEKEATKNLPDFKKD 279
           +N    +  S +V++  V  E+ D      +K   +   EGE  ETEKE  +  P  KK 
Sbjct: 277 INFPIYLWASKEVEVE-VPAEEDDSSDDEDNKSESSSSEEGEEEETEKEEDEKKPKTKKV 335

Query: 278 DQKAIDAELIKAIDAV 231
            +   + EL+  + A+
Sbjct: 336 KETTYEWELLNDMKAI 351

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>RPN2_CANGA (Q6FIP2) 26S proteasome regulatory subunit RPN2|
          Length = 941

 Score = 30.4 bits (67), Expect = 4.8
 Identities = 16/36 (44%), Positives = 21/36 (58%)
 Frame = -1

Query: 362 KARAKKTEGELFETEKEATKNLPDFKKDDQKAIDAE 255
           KARAKKT+ E    E +  K   D KK++ K  DA+
Sbjct: 808 KARAKKTKKEKDTNEDDKKKKEKDLKKEETKKDDAK 843

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>RL27_PEA (Q05462) 60S ribosomal protein L27|
          Length = 135

 Score = 30.4 bits (67), Expect = 4.8
 Identities = 31/129 (24%), Positives = 49/129 (37%), Gaps = 25/129 (19%)
 Frame = -1

Query: 593 ITPGTVLILLAGRYMGKRVVFLKQLKSGL-------LLITGPFKINGVPVRR-------- 459
           + P   +ILL GRY GK+ V +K    G         L+ G  K     +++        
Sbjct: 5   LKPNKAVILLQGRYAGKKAVIVKTFDDGTREKPYGHCLVAGIKKFPSKVIKKDSAKKTAK 64

Query: 458 ----------VNQAYVIATSTKVDISGVKVEKFDDKYFARDKKARAKKTEGELFETEKEA 309
                     VN  +++ T   +D+  +K     D   ++DKK  A K   +  E   + 
Sbjct: 65  KSRVKAFVKLVNYQHLMPTRYTLDVD-LKDAVVPDVLQSKDKKVTALKETKKSLEERFKT 123

Query: 308 TKNLPDFKK 282
            KN   F K
Sbjct: 124 GKNRWFFTK 132

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>RL27_CAEEL (P91914) 60S ribosomal protein L27|
          Length = 136

 Score = 30.4 bits (67), Expect = 4.8
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = -1

Query: 587 PGTVLILLAGRYMGKRVVFLKQLKSGLLLITGPFKI 480
           PG V+++L G+Y G++ V +KQ   G+   T P  I
Sbjct: 7   PGKVVLVLRGKYAGRKAVVVKQQDEGVSDRTYPHAI 42

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>NAR4_HUMAN (Q93070) Ecto-ADP-ribosyltransferase 4 precursor (EC 2.4.2.31)|
           (NAD(P)(+)--arginine ADP-ribosyltransferase 4)
           (Mono(ADP-ribosyl)transferase 4) (Dombrock blood group
           carrier molecule) (CD297 antigen)
          Length = 314

 Score = 30.4 bits (67), Expect = 4.8
 Identities = 29/106 (27%), Positives = 44/106 (41%)
 Frame = -1

Query: 617 KPTKLRSTITPGTVLILLAGRYMGKRVVFLKQLKSGLLLITGPFKINGVPVRRVNQAYVI 438
           K   L +T+ P T+ I L G            L   LLL++G        ++R  +   +
Sbjct: 9   KKILLPTTVPPATMRIWLLGG-----------LLPFLLLLSG--------LQRPTEGSEV 49

Query: 437 ATSTKVDISGVKVEKFDDKYFARDKKARAKKTEGELFETEKEATKN 300
           A     D +      FDD+Y    K+   K T+G+ F  + EA KN
Sbjct: 50  AIKIDFDFAP---GSFDDQYQGCSKQVMEKLTQGDYFTKDIEAQKN 92

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>ELL_MOUSE (O08856) RNA polymerase II elongation factor ELL (Eleven-nineteen|
           lysine-rich leukemia protein)
          Length = 602

 Score = 30.0 bits (66), Expect = 6.2
 Identities = 28/93 (30%), Positives = 39/93 (41%), Gaps = 4/93 (4%)
 Frame = -1

Query: 647 KPRTASTRKPKPTKLRSTITPGTVLILLAGRYMGKRVVFLKQLKSGLLLITGPFKINGVP 468
           K R +  +  + T+ RS I     +I   GRYMGK+V F K           P   + VP
Sbjct: 129 KARQSMAQAEEETRSRSAI-----VIKAGGRYMGKKVQFRK---------PAPGAADAVP 174

Query: 467 VRR----VNQAYVIATSTKVDISGVKVEKFDDK 381
            R+    +N A  I  S+    S V    F D+
Sbjct: 175 SRKRATPINLASAIRKSSGSGASSVVQRPFRDR 207

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>YITM_BACSU (O06748) Hypothetical protein yitM precursor|
          Length = 194

 Score = 30.0 bits (66), Expect = 6.2
 Identities = 23/77 (29%), Positives = 32/77 (41%), Gaps = 5/77 (6%)
 Frame = -1

Query: 452 QAYVIATSTKVDISGVKVEKFDDKYFARDKKARAK-----KTEGELFETEKEATKNLPDF 288
           QA   A     DI     + FD+   A   K   K     K  G++ E + EA K +   
Sbjct: 70  QAKAFANQVVADIKKEDADFFDNLKKAVYSKDALKVDELLKKAGQIVEEKVEAAKEIAA- 128

Query: 287 KKDDQKAIDAELIKAID 237
            KDD   + AEL+  +D
Sbjct: 129 SKDDTSRVQAELVNTVD 145

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>CAF1A_MOUSE (Q9QWF0) Chromatin assembly factor 1 subunit A (CAF-1 subunit A)|
           (Chromatin assembly factor I p150 subunit) (CAF-I 150
           kDa subunit) (CAF-Ip150)
          Length = 911

 Score = 30.0 bits (66), Expect = 6.2
 Identities = 17/39 (43%), Positives = 23/39 (58%)
 Frame = -1

Query: 533 FLKQLKSGLLLITGPFKINGVPVRRVNQAYVIATSTKVD 417
           FL  LKS L L +GP ++ G     +N+  VI  S+KVD
Sbjct: 487 FLSDLKSRLPLRSGPTRVCGHDTDIMNRDVVIVESSKVD 525

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>GATA_CLOTE (Q891I1) Glutamyl-tRNA(Gln) amidotransferase subunit A (EC 6.3.5.-)|
           (Glu-ADT subunit A)
          Length = 485

 Score = 30.0 bits (66), Expect = 6.2
 Identities = 22/67 (32%), Positives = 32/67 (47%)
 Frame = -1

Query: 428 TKVDISGVKVEKFDDKYFARDKKARAKKTEGELFETEKEATKNLPDFKKDDQKAIDAELI 249
           TK+D   VKVE+    Y  R +K  + K    L+   +EA K     K+ D K    E +
Sbjct: 13  TKIDNKEVKVEEVVQSYLNRIEKVDS-KVGAFLYTGSEEAIKKA---KELDNKISKGESL 68

Query: 248 KAIDAVP 228
           KA+  +P
Sbjct: 69  KALGGIP 75

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>ZCHC6_MOUSE (Q5BLK4) Zinc finger CCHC domain-containing protein 6|
          Length = 1491

 Score = 30.0 bits (66), Expect = 6.2
 Identities = 15/36 (41%), Positives = 22/36 (61%)
 Frame = -2

Query: 391 LMTSTLLGTRRPGQRRLKGSCLRLRRRQPRTCLTSK 284
           L T  LLG ++  + RLK  C+   +R+PR C T+K
Sbjct: 209 LSTKELLGLQQ-AEERLKRDCIDRLKRRPRNCPTAK 243

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>YLD2_CAEEL (Q03567) Hypothetical protein C38C10.2 in chromosome III|
          Length = 493

 Score = 29.6 bits (65), Expect = 8.1
 Identities = 15/26 (57%), Positives = 17/26 (65%)
 Frame = -1

Query: 566 LAGRYMGKRVVFLKQLKSGLLLITGP 489
           LA RY GKRVVF+  L S LL +  P
Sbjct: 104 LASRYGGKRVVFVTILGSALLTLLNP 129

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>NAMA_LISMO (Q8Y4H1) NADPH dehydrogenase (EC 1.6.99.1) (Xenobiotic reductase)|
          Length = 338

 Score = 29.6 bits (65), Expect = 8.1
 Identities = 23/84 (27%), Positives = 39/84 (46%)
 Frame = -1

Query: 554 YMGKRVVFLKQLKSGLLLITGPFKINGVPVRRVNQAYVIATSTKVDISGVKVEKFDDKYF 375
           + G +V F  +++ G  + TG   +    + R  QA  I  + + D+  V  E   + YF
Sbjct: 260 FPGYQVPFADEIRRGAGIATGALGL----ITRGEQAEEILCNERADLIIVGRELLRNPYF 315

Query: 374 ARDKKARAKKTEGELFETEKEATK 303
           A+D    A K  GE  E  K+ ++
Sbjct: 316 AKD----AAKQLGETIEAPKQYSR 335

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>G6PI_MYCH2 (Q600A8) Glucose-6-phosphate isomerase (EC 5.3.1.9) (GPI)|
           (Phosphoglucose isomerase) (PGI) (Phosphohexose
           isomerase) (PHI)
          Length = 429

 Score = 29.6 bits (65), Expect = 8.1
 Identities = 17/67 (25%), Positives = 34/67 (50%)
 Frame = +3

Query: 81  EVK*QGTNFSNKLGKTHSKRRTSTNLEGHLMGLVTVPEREPGTKIVLKVRDSIDSLDQLS 260
           E+K    +F N++ + H +     + +   +G    PE     + + ++R  +++L Q S
Sbjct: 10  EIKLDYQDFQNQINEFHKRINDKNSPDIIFLGWNNFPEVAINPQEIARMRKIVENLHQNS 69

Query: 261 INGLLVI 281
           IN L+VI
Sbjct: 70  INVLVVI 76

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>SYF2_DEBHA (Q6BVE0) Pre-mRNA-splicing factor SYF2|
          Length = 231

 Score = 29.6 bits (65), Expect = 8.1
 Identities = 26/100 (26%), Positives = 50/100 (50%), Gaps = 4/100 (4%)
 Frame = -1

Query: 431 STKVDISGVKVEKFDDKYFARDKKARAKKTEGELFETEKEATKNLPDFKKDDQKAIDAEL 252
           ST+V +S  ++ K   +   R K+   K  + ELF+  K+      ++KK +QK ++AEL
Sbjct: 23  STRVSVSD-RLAKL--QRLKRKKQESEKLNKQELFQDYKQQKLKSIEYKKIEQKKLNAEL 79

Query: 251 ----IKAIDAVPDLKNYLGARFSLRDGDKPHEMTF*VGRS 144
               + +I+   D +      +++ D +K  + T   GR+
Sbjct: 80  EQEKLDSIEKGEDFERKQNWDWTIEDCEKWEKKTKQKGRN 119


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 83,856,999
Number of Sequences: 219361
Number of extensions: 1734957
Number of successful extensions: 5630
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 5347
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5605
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6143359464
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result