| Clone Name | rbags12f05 |
|---|---|
| Clone Library Name | barley_pub |
>gb|U84268.1|HVU84268 Hordeum vulgare vacuolar proton-translocating ATPase subunit E (Ylp) mRNA, complete cds Length = 1012 Score = 1150 bits (580), Expect = 0.0 Identities = 590/592 (99%), Gaps = 1/592 (0%) Strand = Plus / Minus Query: 12 gtttgtgctcggcaacaataatgaacaaataggtaatgtttacataagggggtaggaata 71 |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||| Sbjct: 992 gtttgtgctcggcaacaataatgaacaaataggtaatgtttacataagagggtag-aata 934 Query: 72 ctttaaacaacaatgttcgcaaaaccgggcagagttcggtgcacctgctgggggtcaaac 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 933 ctttaaacaacaatgttcgcaaaaccgggcagagttcggtgcacctgctgggggtcaaac 874 Query: 132 cagcagccattttacatagaaacggttgtaccatcaccaaaatacaagcacgcattatgc 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 873 cagcagccattttacatagaaacggttgtaccatcaccaaaatacaagcacgcattatgc 814 Query: 192 cgcaacaagaagctttcggatctctggcaatttcttgcggaagacaacttcaagccttgc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 813 cgcaacaagaagctttcggatctctggcaatttcttgcggaagacaacttcaagccttgc 754 Query: 252 atcaactgtattctcgaacacaatctttccatctcgagaagccagcacaacacctccatg 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 753 atcaactgtattctcgaacacaatctttccatctcgagaagccagcacaacacctccatg 694 Query: 312 gcaaatctggccgtgcttatcatcatggctcggagaaggtggtaggtagacactatggtc 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 693 gcaaatctggccgtgcttatcatcatggctcggagaaggtggtaggtagacactatggtc 634 Query: 372 aactagtatctctggctcatggacatctgcttttgatgcatattcattctttgctgaatg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 633 aactagtatctctggctcatggacatctgcttttgatgcatattcattctttgctgaatg 574 Query: 432 cagtacagattccacattatggtgatcttctttgcggcagcggagcagtacagctggctc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 573 cagtacagattccacattatggtgatcttctttgcggcagcggagcagtacagctggctc 514 Query: 492 tttcaaccgaagcaagccctgaacaacaagttctttcaacagattcctgtattcatggtg 551 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 513 tttcaaccgaagcaagccctgaacaacaagttctttcaacagattcctgtattcatggtg 454 Query: 552 gttgctgctgatattgaggagctccttcattgcatcctctttcattttgtta 603 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 453 gttgctgctgatattgaggagctccttcattgcatcctctttcattttgtta 402
>emb|Z33632.1|HVATPAX H.vulgare (Gerbel) mRNA for adenosine triphosphatase Length = 1034 Score = 1142 bits (576), Expect = 0.0 Identities = 589/592 (99%), Gaps = 1/592 (0%) Strand = Plus / Minus Query: 12 gtttgtgctcggcaacaataatgaacaaataggtaatgtttacataagggggtaggaata 71 |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||| Sbjct: 952 gtttgtgctcggcaacaataatgaacaaataggtaatgtttacataagagggtag-aata 894 Query: 72 ctttaaacaacaatgttcgcaaaaccgggcagagttcggtgcacctgctgggggtcaaac 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 893 ctttaaacaacaatgttcgcaaaaccgggcagagttcggtgcacctgctgggggtcaaac 834 Query: 132 cagcagccattttacatagaaacggttgtaccatcaccaaaatacaagcacgcattatgc 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 833 cagcagccattttacatagaaacggttgtaccatcaccaaaatacaagcacgcattatgc 774 Query: 192 cgcaacaagaagctttcggatctctggcaatttcttgcggaagacaacttcaagccttgc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 773 cgcaacaagaagctttcggatctctggcaatttcttgcggaagacaacttcaagccttgc 714 Query: 252 atcaactgtattctcgaacacaatctttccatctcgagaagccagcacaacacctccatg 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 atcaactgtattctcgaacacaatctttccatctcgagaagccagcacaacacctccatg 654 Query: 312 gcaaatctggccgtgcttatcatcatggctcggagaaggtggtaggtagacactatggtc 371 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 653 gcaaatctggccgtgcttatcatcatggctcggagaaggtggcaggtagacactatggtc 594 Query: 372 aactagtatctctggctcatggacatctgcttttgatgcatattcattctttgctgaatg 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 593 aactagtatctctggctcatggacatctgcttttgatgcatattcattctttgctgaatg 534 Query: 432 cagtacagattccacattatggtgatcttctttgcggcagcggagcagtacagctggctc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 533 cagtacagattccacattatggtgatcttctttgcggcagcggagcagtacagctggctc 474 Query: 492 tttcaaccgaagcaagccctgaacaacaagttctttcaacagattcctgtattcatggtg 551 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 473 tttcaaccgaagcaagccctgaacaacaagttctttcaacagattcctgtattcatggtg 414 Query: 552 gttgctgctgatattgaggagctccttcattgcatcctctttcattttgtta 603 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 413 gttgctgctgatattgaggagctccttcattgcatcctctttcattttgtta 362
>gb|U84269.1|HVU84269 Hordeum vulgare vacuolar proton-translocating ATPase subunit E (Ylp) mRNA, complete cds Length = 1057 Score = 1134 bits (572), Expect = 0.0 Identities = 588/592 (99%), Gaps = 1/592 (0%) Strand = Plus / Minus Query: 12 gtttgtgctcggcaacaataatgaacaaataggtaatgtttacataagggggtaggaata 71 |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||| Sbjct: 992 gtttgtgctcggcaacaataatgaacaaataggtaatgtttacataagagggtag-aata 934 Query: 72 ctttaaacaacaatgttcgcaaaaccgggcagagttcggtgcacctgctgggggtcaaac 131 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 933 ctttaaacaacaatgttcgcaaaaccgggcagagttcggtgcacctgctgggggtcaaac 874 Query: 132 cagcagccattttacatagaaacggttgtaccatcaccaaaatacaagcacgcattatgc 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 873 cagcagccattttacatagaaacggttgtaccatcaccaaaatacaagcacgcattatgc 814 Query: 192 cgcaacaagaagctttcggatctctggcaatttcttgcggaagacaacttcaagccttgc 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 813 cgcaacaagaagctttcggatctctggcaatttcttgcggaagacaacttcaagccttgc 754 Query: 252 atcaactgtattctcgaacacaatctttccatctcgagaagccagcacaacacctccatg 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 753 atcaactgtattctcgaacacaatctttccatctcgagaagccagcacaacacctccatg 694 Query: 312 gcaaatctggccgtgcttatcatcatggctcggagaaggtggtaggtagacactatggtc 371 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 693 gcaaatctggccgtgcttatcatcatggctcggagaaggtggcaggtagacactatggtc 634 Query: 372 aactagtatctctggctcatggacatctgcttttgatgcatattcattctttgctgaatg 431 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 633 aactagtatctctggctcagggacatctgcttttgatgcatattcattctttgctgaatg 574 Query: 432 cagtacagattccacattatggtgatcttctttgcggcagcggagcagtacagctggctc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 573 cagtacagattccacattatggtgatcttctttgcggcagcggagcagtacagctggctc 514 Query: 492 tttcaaccgaagcaagccctgaacaacaagttctttcaacagattcctgtattcatggtg 551 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 513 tttcaaccgaagcaagccctgaacaacaagttctttcaacagattcctgtattcatggtg 454 Query: 552 gttgctgctgatattgaggagctccttcattgcatcctctttcattttgtta 603 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 453 gttgctgctgatattgaggagctccttcattgcatcctctttcattttgtta 402
>gb|DQ344624.1| Triticum aestivum vacuolar ATP synthase subunit E (VATE) mRNA, complete cds Length = 1970 Score = 922 bits (465), Expect = 0.0 Identities = 560/589 (95%), Gaps = 2/589 (0%) Strand = Plus / Minus Query: 12 gtttgtgctcggcaacaataatgaacaaataggtaatgtttacataagggggtaggaata 71 ||||||||||||| || |||||||||||||||||| |||||||||||| || | |||||| Sbjct: 1002 gtttgtgctcggcgacgataatgaacaaataggtagtgtttacataagaggat-ggaata 944 Query: 72 ctttaaacaa-caatgttcgcaaaaccgggcagagttcggtgcacctgctgggggtcaaa 130 |||||||||| |||||||||||||||||||| ||||||| |||||||||||||||||||| Sbjct: 943 ctttaaacaatcaatgttcgcaaaaccgggcggagttcgttgcacctgctgggggtcaaa 884 Query: 131 ccagcagccattttacatagaaacggttgtaccatcaccaaaatacaagcacgcattatg 190 |||||||||||||||||||||||| | |||||||||||||||||||||| ||||||||| Sbjct: 883 ccagcagccattttacatagaaacagctgtaccatcaccaaaatacaagtgcgcattatg 824 Query: 191 ccgcaacaagaagctttcggatctctggcaatttcttgcggaagacaacttcaagccttg 250 |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| Sbjct: 823 ccgcaacaagaagcttccggatctctggcaatttcttgcggaaaacaacttcaagccttg 764 Query: 251 catcaactgtattctcgaacacaatctttccatctcgagaagccagcacaacacctccat 310 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 763 catcaactgtattctcaaacacaatctttccatctcgagaagccagcacaacacctccat 704 Query: 311 ggcaaatctggccgtgcttatcatcatggctcggagaaggtggtaggtagacactatggt 370 |||||||||||||||||| ||| ||||||||||||||||||| ||||||||||| |||| Sbjct: 703 ggcaaatctggccgtgctcatcgccatggctcggagaaggtggcaggtagacactgtggt 644 Query: 371 caactagtatctctggctcatggacatctgcttttgatgcatattcattctttgctgaat 430 ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 643 caactagtatctcgggctcatggacatctgcttttgatgcatactcattctttgctgaat 584 Query: 431 gcagtacagattccacattatggtgatcttctttgcggcagcggagcagtacagctggct 490 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 583 gcagtacagattccacattatggtgatcttctttgcggcagcggagcagtacagctggct 524 Query: 491 ctttcaaccgaagcaagccctgaacaacaagttctttcaacagattcctgtattcatggt 550 ||||||||||||||| |||||||||||| |||||||| ||||||||| |||||||||||| Sbjct: 523 ctttcaaccgaagcaggccctgaacaacgagttcttttaacagattcttgtattcatggt 464 Query: 551 ggttgctgctgatattgaggagctccttcattgcatcctctttcatttt 599 |||||||||||||||| ||||| |||||||||||||||||||||||||| Sbjct: 463 ggttgctgctgatattcaggagttccttcattgcatcctctttcatttt 415
>gb|DQ272489.1| Triticum aestivum vacuolar proton ATPase subunit E mRNA, complete cds Length = 742 Score = 743 bits (375), Expect = 0.0 Identities = 423/439 (96%) Strand = Plus / Minus Query: 161 accatcaccaaaatacaagcacgcattatgccgcaacaagaagctttcggatctctggca 220 ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 742 accatcaccaaaatacaagtgcgcattatgccgcaacaagaagcttccggatctctggca 683 Query: 221 atttcttgcggaagacaacttcaagccttgcatcaactgtattctcgaacacaatctttc 280 ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 682 atttcttgcggaaaacaacttcaagccttgcatcaactgtattctcaaacacaatctttc 623 Query: 281 catctcgagaagccagcacaacacctccatggcaaatctggccgtgcttatcatcatggc 340 |||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| Sbjct: 622 catctcgagaagccagcacaacacctccatggcaaatctggccgtgctcatcaccatggc 563 Query: 341 tcggagaaggtggtaggtagacactatggtcaactagtatctctggctcatggacatctg 400 ||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 562 tcggagaaggtggcaggtagacactgtggtcaacgagtatctctggctcatggacatctg 503 Query: 401 cttttgatgcatattcattctttgctgaatgcagtacagattccacattatggtgatctt 460 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 502 cttttgatgcatactcattctttgctgaatgcagtacagattccacattatggtgatctt 443 Query: 461 ctttgcggcagcggagcagtacagctggctctttcaaccgaagcaagccctgaacaacaa 520 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | Sbjct: 442 ctttgcggcagcggagcagtacagctggctctttcaaccgaagcaggccctgaacaacga 383 Query: 521 gttctttcaacagattcctgtattcatggtggttgctgctgatattgaggagctccttca 580 ||||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 382 gttcttttaacagattcctgtattcatggtggttgctgctgatattcaggagttccttca 323 Query: 581 ttgcatcctctttcatttt 599 ||||||||||||||||||| Sbjct: 322 ttgcatcctctttcatttt 304
>gb|AY104382.1| Zea mays PCO079851 mRNA sequence Length = 1233 Score = 327 bits (165), Expect = 2e-86 Identities = 345/405 (85%) Strand = Plus / Minus Query: 198 aagaagctttcggatctctggcaatttcttgcggaagacaacttcaagccttgcatcaac 257 ||||||||| |||||||||||||||||||||||||| |||||||| || ||||| |||| Sbjct: 862 aagaagcttccggatctctggcaatttcttgcggaaaacaacttctagtcttgcgtcaag 803 Query: 258 tgtattctcgaacacaatctttccatctcgagaagccagcacaacacctccatggcaaat 317 |||| |||| |||||||||||||||||||||||||||| |||| ||||||| ||||| Sbjct: 802 tgtactctcaaacacaatctttccatctcgagaagccaatacaatacctccagagcaaaa 743 Query: 318 ctggccgtgcttatcatcatggctcggagaaggtggtaggtagacactatggtcaactag 377 |||||| || ||||| |||||| || | |||||| ||||| ||| ||| ||||| | Sbjct: 742 ctggccatgagcatcatgatggcttggggcaggtggcaggtatacatcatgatcaacaaa 683 Query: 378 tatctctggctcatggacatctgcttttgatgcatattcattctttgctgaatgcagtac 437 ||||||||| |||||||||||||||||||||||||| |||| ||||||||||||||| || Sbjct: 682 tatctctggttcatggacatctgcttttgatgcatactcatgctttgctgaatgcagcac 623 Query: 438 agattccacattatggtgatcttctttgcggcagcggagcagtacagctggctctttcaa 497 |||||||||| ||||||||| || |||||||| ||||||| ||| |||||||||||||| Sbjct: 622 tgattccacatgatggtgatcatccttgcggcaacggagcaatactgctggctctttcaa 563 Query: 498 ccgaagcaagccctgaacaacaagttctttcaacagattcctgtattcatggtggttgct 557 || ||||| ||||||| | || |||||||| || ||| ||||||||||||||||| Sbjct: 562 acggagcaaaccctgaatgattaggtctttcaaaaggttcttgtattcatggtggttgtg 503 Query: 558 gctgatattgaggagctccttcattgcatcctctttcattttgtt 602 ||||| | ||| || |||||||| ||||| |||||||||||||| Sbjct: 502 gctgacaaggagaagttccttcatggcatcgtctttcattttgtt 458 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 19 ctcggcaacaataatgaacaaataggta 46 |||||| |||||||||||| |||||||| Sbjct: 1044 ctcggcgacaataatgaaccaataggta 1017
>ref|NM_192458.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 693 Score = 240 bits (121), Expect = 4e-60 Identities = 190/213 (89%) Strand = Plus / Minus Query: 343 ggagaaggtggtaggtagacactatggtcaactagtatctctggctcatggacatctgct 402 |||||||| |||||||| ||| |||||||| ||||||||||| | ||| || |||||| Sbjct: 527 ggagaaggcggtaggtacacatcgtggtcaacaagtatctctgggtgatgaacttctgct 468 Query: 403 tttgatgcatattcattctttgctgaatgcagtacagattccacattatggtgatcttct 462 ||||| |||||||||||||||||||||||||||||||||||||||| ||| || |||||| Sbjct: 467 tttgacgcatattcattctttgctgaatgcagtacagattccacatgatgatggtcttct 408 Query: 463 ttgcggcagcggagcagtacagctggctctttcaaccgaagcaagccctgaacaacaagt 522 |||||||| ||||| ||||| ||||||||||||||||||||||| |||||||| || ||| Sbjct: 407 ttgcggcaacggagaagtaccgctggctctttcaaccgaagcaaaccctgaacgacgagt 348 Query: 523 tctttcaacagattcctgtattcatggtggttg 555 |||||||| || ||| ||||||||||||||||| Sbjct: 347 tctttcaaaaggttcttgtattcatggtggttg 315 Score = 151 bits (76), Expect = 3e-33 Identities = 103/112 (91%) Strand = Plus / Minus Query: 198 aagaagctttcggatctctggcaatttcttgcggaagacaacttcaagccttgcatcaac 257 ||||||||| |||||||| || ||||||||||||||||||||||| ||||| ||||||| Sbjct: 672 aagaagcttccggatctccggtaatttcttgcggaagacaacttccagcctggcatcaag 613 Query: 258 tgtattctcgaacacaatctttccatctcgagaagccagcacaacacctcca 309 ||| ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 612 tgtgttctcacacacaatctttccatctcgagaagccagcacaacacctcca 561
>dbj|AK071200.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023086K07, full insert sequence Length = 1134 Score = 240 bits (121), Expect = 4e-60 Identities = 190/213 (89%) Strand = Plus / Minus Query: 343 ggagaaggtggtaggtagacactatggtcaactagtatctctggctcatggacatctgct 402 |||||||| |||||||| ||| |||||||| ||||||||||| | ||| || |||||| Sbjct: 727 ggagaaggcggtaggtacacatcgtggtcaacaagtatctctgggtgatgaacttctgct 668 Query: 403 tttgatgcatattcattctttgctgaatgcagtacagattccacattatggtgatcttct 462 ||||| |||||||||||||||||||||||||||||||||||||||| ||| || |||||| Sbjct: 667 tttgacgcatattcattctttgctgaatgcagtacagattccacatgatgatggtcttct 608 Query: 463 ttgcggcagcggagcagtacagctggctctttcaaccgaagcaagccctgaacaacaagt 522 |||||||| ||||| ||||| ||||||||||||||||||||||| |||||||| || ||| Sbjct: 607 ttgcggcaacggagaagtaccgctggctctttcaaccgaagcaaaccctgaacgacgagt 548 Query: 523 tctttcaacagattcctgtattcatggtggttg 555 |||||||| || ||| ||||||||||||||||| Sbjct: 547 tctttcaaaaggttcttgtattcatggtggttg 515 Score = 151 bits (76), Expect = 3e-33 Identities = 103/112 (91%) Strand = Plus / Minus Query: 198 aagaagctttcggatctctggcaatttcttgcggaagacaacttcaagccttgcatcaac 257 ||||||||| |||||||| || ||||||||||||||||||||||| ||||| ||||||| Sbjct: 872 aagaagcttccggatctccggtaatttcttgcggaagacaacttccagcctggcatcaag 813 Query: 258 tgtattctcgaacacaatctttccatctcgagaagccagcacaacacctcca 309 ||| ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 812 tgtgttctcacacacaatctttccatctcgagaagccagcacaacacctcca 761 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Minus Query: 16 gtgctcggcaacaataatgaacaaataggtaatgttt 52 ||||||||| | ||||||||||||||||||| ||||| Sbjct: 1059 gtgctcggcgataataatgaacaaataggtagtgttt 1023
>gb|BT018259.1| Zea mays clone EL01T0202A06.c mRNA sequence Length = 684 Score = 202 bits (102), Expect = 1e-48 Identities = 331/406 (81%), Gaps = 1/406 (0%) Strand = Plus / Minus Query: 198 aagaagctttcggatctctggcaatttcttgcggaagacaacttcaagccttgcatcaac 257 ||||||||| |||||||||||||||||||||||||| |||||||| || | || ||| Sbjct: 539 aagaagcttccggatctctggcaatttcttgcggaaaacaacttccagtttggcgccaag 480 Query: 258 tgtattctcgaacacaatctttccatctcgagaagccagcacaacacctccatggcaaat 317 | | |||| ||| ||||||||||||||| |||||||| |||| ||||||| ||||| Sbjct: 479 agcactctcaaacgcaatctttccatctctagaagccaagacaatacctccagagcaaaa 420 Query: 318 ctgg-ccgtgcttatcatcatggctcggagaaggtggtaggtagacactatggtcaacta 376 |||| ||||| ||||| |||||| || | ||| || | | | ||| |||||||| | Sbjct: 419 ctggtccgtgagcatcatgatggcttggggcaggcggcaaggacacatcgtggtcaacaa 360 Query: 377 gtatctctggctcatggacatctgcttttgatgcatattcattctttgctgaatgcagta 436 ||||||||| |||||||| ||||||||||||||||| || | ||||||||||||||||| Sbjct: 359 atatctctggttcatggacctctgcttttgatgcatactcgtgctttgctgaatgcagta 300 Query: 437 cagattccacattatggtgatcttctttgcggcagcggagcagtacagctggctctttca 496 | |||||||||| |||| ||||||| |||||||| ||||||| | || |||||||||||| Sbjct: 299 ctgattccacatgatggggatcttccttgcggcaacggagcaattcacctggctctttca 240 Query: 497 accgaagcaagccctgaacaacaagttctttcaacagattcctgtattcatggtggttgc 556 | || || ||||||||||||| || |||||||| || ||||| ||||||| || || Sbjct: 239 aacggaggaagccctgaacaattagatctttcaaaagggtcctgccttcatggaggatgt 180 Query: 557 tgctgatattgaggagctccttcattgcatcctctttcattttgtt 602 ||||| | || ||| |||||||| ||||| ||||||||||||| Sbjct: 179 ggctgacaaggaagagttccttcatcgcatcgcctttcattttgtt 134
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 194 bits (98), Expect = 2e-46 Identities = 152/170 (89%) Strand = Plus / Minus Query: 343 ggagaaggtggtaggtagacactatggtcaactagtatctctggctcatggacatctgct 402 |||||||| |||||||| ||| |||||||| ||||||||||| | ||| || |||||| Sbjct: 26808552 ggagaaggcggtaggtacacatcgtggtcaacaagtatctctgggtgatgaacttctgct 26808493 Query: 403 tttgatgcatattcattctttgctgaatgcagtacagattccacattatggtgatcttct 462 ||||| |||||||||||||||||||||||||||||||||||||||| ||| || |||||| Sbjct: 26808492 tttgacgcatattcattctttgctgaatgcagtacagattccacatgatgatggtcttct 26808433 Query: 463 ttgcggcagcggagcagtacagctggctctttcaaccgaagcaagccctg 512 |||||||| ||||| ||||| ||||||||||||||||||||||| ||||| Sbjct: 26808432 ttgcggcaacggagaagtaccgctggctctttcaaccgaagcaaaccctg 26808383 Score = 131 bits (66), Expect = 3e-27 Identities = 84/90 (93%) Strand = Plus / Minus Query: 220 aatttcttgcggaagacaacttcaagccttgcatcaactgtattctcgaacacaatcttt 279 ||||||||||||||||||||||| ||||| ||||||| ||| ||||| ||||||||||| Sbjct: 26809280 aatttcttgcggaagacaacttccagcctggcatcaagtgtgttctcacacacaatcttt 26809221 Query: 280 ccatctcgagaagccagcacaacacctcca 309 |||||||||||||||||||||||||||||| Sbjct: 26809220 ccatctcgagaagccagcacaacacctcca 26809191 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 509 cctgaacaacaagttctttcaacagattcctgtattcatggtggttg 555 ||||||| || ||||||||||| || ||| ||||||||||||||||| Sbjct: 26808033 cctgaacgacgagttctttcaaaaggttcttgtattcatggtggttg 26807987 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Minus Query: 16 gtgctcggcaacaataatgaacaaataggtaatgttt 52 ||||||||| | ||||||||||||||||||| ||||| Sbjct: 26809702 gtgctcggcgataataatgaacaaataggtagtgttt 26809666 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 274 atctttccatctcgagaagccagcacaac 302 |||||||||||||| ||||| |||||||| Sbjct: 6699280 atctttccatctcgggaagctagcacaac 6699308
>dbj|AP003291.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0684E06 Length = 147004 Score = 194 bits (98), Expect = 2e-46 Identities = 152/170 (89%) Strand = Plus / Minus Query: 343 ggagaaggtggtaggtagacactatggtcaactagtatctctggctcatggacatctgct 402 |||||||| |||||||| ||| |||||||| ||||||||||| | ||| || |||||| Sbjct: 44201 ggagaaggcggtaggtacacatcgtggtcaacaagtatctctgggtgatgaacttctgct 44142 Query: 403 tttgatgcatattcattctttgctgaatgcagtacagattccacattatggtgatcttct 462 ||||| |||||||||||||||||||||||||||||||||||||||| ||| || |||||| Sbjct: 44141 tttgacgcatattcattctttgctgaatgcagtacagattccacatgatgatggtcttct 44082 Query: 463 ttgcggcagcggagcagtacagctggctctttcaaccgaagcaagccctg 512 |||||||| ||||| ||||| ||||||||||||||||||||||| ||||| Sbjct: 44081 ttgcggcaacggagaagtaccgctggctctttcaaccgaagcaaaccctg 44032 Score = 131 bits (66), Expect = 3e-27 Identities = 84/90 (93%) Strand = Plus / Minus Query: 220 aatttcttgcggaagacaacttcaagccttgcatcaactgtattctcgaacacaatcttt 279 ||||||||||||||||||||||| ||||| ||||||| ||| ||||| ||||||||||| Sbjct: 44929 aatttcttgcggaagacaacttccagcctggcatcaagtgtgttctcacacacaatcttt 44870 Query: 280 ccatctcgagaagccagcacaacacctcca 309 |||||||||||||||||||||||||||||| Sbjct: 44869 ccatctcgagaagccagcacaacacctcca 44840 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 509 cctgaacaacaagttctttcaacagattcctgtattcatggtggttg 555 ||||||| || ||||||||||| || ||| ||||||||||||||||| Sbjct: 43682 cctgaacgacgagttctttcaaaaggttcttgtattcatggtggttg 43636 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Minus Query: 16 gtgctcggcaacaataatgaacaaataggtaatgttt 52 ||||||||| | ||||||||||||||||||| ||||| Sbjct: 45351 gtgctcggcgataataatgaacaaataggtagtgttt 45315
>gb|AF152600.1|AF152600 Zea mays unknown mRNA Length = 497 Score = 107 bits (54), Expect = 4e-20 Identities = 102/118 (86%) Strand = Plus / Minus Query: 485 ctggctctttcaaccgaagcaagccctgaacaacaagttctttcaacagattcctgtatt 544 ||||||||||||| || |||||||||||||||| || |||||||| || ||| |||||| Sbjct: 497 ctggctctttcaaacggagcaagccctgaacaattagatctttcaaaaggttcttgtatt 438 Query: 545 catggtggttgctgctgatattgaggagctccttcattgcatcctctttcattttgtt 602 ||||||||||| ||||| | |||||| |||||||| ||||| |||||||||||||| Sbjct: 437 catggtggttgtggctgacaaggaggagttccttcatcgcatcgtctttcattttgtt 380
>emb|X96785.1|SOVHATP S.oleracea mRNA for vacuolar H(+)-ATPase Length = 1030 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 247 cttgcatcaactgtattctcgaacacaatctttccatctcgagaagccagcacaacacct 306 |||||||||| || ||||| |||||||| || ||||||||||||||||| || |||||| Sbjct: 713 cttgcatcaagagtgttctcaaacacaattttgccatctcgagaagccagaacgacacct 654 Query: 307 cca 309 ||| Sbjct: 653 cca 651
>gb|AC140913.25| Medicago truncatula clone mth2-26h9, complete sequence Length = 124828 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 250 gcatcaactgtattctcgaacacaatctttccatctcgagaagccagcacaacacctcca 309 ||||||| |||||| || ||||||||||||||||| ||||||||| || ||||||||| Sbjct: 2080 gcatcaagtgtattttcaaacacaatctttccatcatgagaagccaataccacacctcca 2021
>emb|CR962124.2| Medicago truncatula chromosome 5 clone mth2-44c15, COMPLETE SEQUENCE Length = 136068 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 250 gcatcaactgtattctcgaacacaatctttccatctcgagaagccagcacaacacctcca 309 ||||||| |||||| || ||||||||||||||||| ||||||||| || ||||||||| Sbjct: 21066 gcatcaagtgtattttcaaacacaatctttccatcatgagaagccaataccacacctcca 21125
>gb|AY220098.1| Phaseolus acutifolius vacuolar ATPase subunit E mRNA, partial cds Length = 931 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 269 acacaatctttccatctcgagaagccagcac 299 |||||||||||||||| |||||||||||||| Sbjct: 584 acacaatctttccatcacgagaagccagcac 554
>gb|AF165939.1|AF165939 Citrus limon vacuolar V-H+ATPase subunit E mRNA, complete cds Length = 1057 Score = 52.0 bits (26), Expect = 0.002 Identities = 86/106 (81%) Strand = Plus / Minus Query: 203 gctttcggatctctggcaatttcttgcggaagacaacttcaagccttgcatcaactgtat 262 |||| |||||||| || | ||| || ||||| ||||| || | || |||||||| |||| Sbjct: 789 gcttccggatctcaggaagttttttacggaacacaacatccaaccgtgcatcaagggtat 730 Query: 263 tctcgaacacaatctttccatctcgagaagccagcacaacacctcc 308 |||| | || ||||| |||||||||||||||| ||| |||||||| Sbjct: 729 tctcacatactatcttcccatctcgagaagccaccacgacacctcc 684
>dbj|AB037106.1| Citrus unshiu Cit-VATP E-1 mRNA for vacuolar H+-ATPase E subunit-1, complete cds Length = 990 Score = 52.0 bits (26), Expect = 0.002 Identities = 86/106 (81%) Strand = Plus / Minus Query: 203 gctttcggatctctggcaatttcttgcggaagacaacttcaagccttgcatcaactgtat 262 |||| |||||||| || | ||| || ||||| ||||| || | || |||||||| |||| Sbjct: 727 gcttccggatctcaggaagttttttacggaacacaacatccaaccgtgcatcaagggtat 668 Query: 263 tctcgaacacaatctttccatctcgagaagccagcacaacacctcc 308 |||| | || ||||| |||||||||||||||| ||| |||||||| Sbjct: 667 tctcacatactatcttcccatctcgagaagccaccacgacacctcc 622
>gb|AF282970.1|AF282970 Lycopersicon esculentum putative vacuolar proton ATPase subunit E mRNA, partial cds Length = 844 Score = 50.1 bits (25), Expect = 0.009 Identities = 82/101 (81%) Strand = Plus / Minus Query: 208 cggatctctggcaatttcttgcggaagacaacttcaagccttgcatcaactgtattctcg 267 ||||||||||| | |||||| ||||| |||||||| | || ||||||| || || || Sbjct: 685 cggatctctggtagtttcttacggaacacaacttccaatctggcatcaagagtgttttca 626 Query: 268 aacacaatctttccatctcgagaagccagcacaacacctcc 308 ||||||| || |||||||||||||||| ||| || ||||| Sbjct: 625 cacacaattttcccatctcgagaagccaacaccactcctcc 585
>ref|NM_117185.3| Arabidopsis thaliana TUF (TUFF) AT4G11150 (TUF) mRNA, complete cds Length = 1057 Score = 48.1 bits (24), Expect = 0.034 Identities = 51/60 (85%) Strand = Plus / Minus Query: 250 gcatcaactgtattctcgaacacaatctttccatctcgagaagccagcacaacacctcca 309 ||||||| ||| |||||| |||| || || ||||| |||||||| | ||||||||||||| Sbjct: 749 gcatcaagtgtgttctcgcacacgattttcccatcacgagaagctaacacaacacctcca 690 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 490 tctttcaaccgaagcaagccctgaacaa 517 ||||||||||||||||| | |||||||| Sbjct: 509 tctttcaaccgaagcaaacactgaacaa 482
>gb|AF499722.1| Thellungiella halophila vacuolar ATPase subunit E-like protein mRNA, complete cds Length = 1023 Score = 48.1 bits (24), Expect = 0.034 Identities = 42/48 (87%) Strand = Plus / Minus Query: 262 ttctcgaacacaatctttccatctcgagaagccagcacaacacctcca 309 |||||| ||||||| || ||||| |||||||| | ||||||||||||| Sbjct: 690 ttctcgcacacaattttcccatcacgagaagctaacacaacacctcca 643 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Minus Query: 481 acagctggctctttcaaccgaagcaagccctgaacaa 517 |||| ||| ||||||||||||||||| | |||||||| Sbjct: 471 acagatggttctttcaaccgaagcaaacactgaacaa 435
>gb|DQ124070.1| Coffea arabica clone MN-SSH4-F11 mRNA sequence Length = 499 Score = 48.1 bits (24), Expect = 0.034 Identities = 72/88 (81%) Strand = Plus / Plus Query: 208 cggatctctggcaatttcttgcggaagacaacttcaagccttgcatcaactgtattctcg 267 ||||||||||| | ||| | |||||| ||||| || | ||| ||||| | ||| || || Sbjct: 46 cggatctctggaagtttttggcggaacacaacatccaacctagcatcgagtgtgttttca 105 Query: 268 aacacaatctttccatctcgagaagcca 295 ||||||| ||||||||||||||||||| Sbjct: 106 cacacaatttttccatctcgagaagcca 133
>emb|AL161531.2|ATCHRIV31 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 31 Length = 198301 Score = 48.1 bits (24), Expect = 0.034 Identities = 51/60 (85%) Strand = Plus / Minus Query: 250 gcatcaactgtattctcgaacacaatctttccatctcgagaagccagcacaacacctcca 309 ||||||| ||| |||||| |||| || || ||||| |||||||| | ||||||||||||| Sbjct: 45750 gcatcaagtgtgttctcgcacacgattttcccatcacgagaagctaacacaacacctcca 45691
>emb|AL049876.1|ATT22B4 Arabidopsis thaliana DNA chromosome 4, BAC clone T22B4 (ESSA project) Length = 108598 Score = 48.1 bits (24), Expect = 0.034 Identities = 51/60 (85%) Strand = Plus / Minus Query: 250 gcatcaactgtattctcgaacacaatctttccatctcgagaagccagcacaacacctcca 309 ||||||| ||| |||||| |||| || || ||||| |||||||| | ||||||||||||| Sbjct: 73283 gcatcaagtgtgttctcgcacacgattttcccatcacgagaagctaacacaacacctcca 73224
>gb|AY081632.1| Arabidopsis thaliana similar to vacuolar ATPases (F2P3.10) mRNA, complete cds Length = 876 Score = 48.1 bits (24), Expect = 0.034 Identities = 51/60 (85%) Strand = Plus / Minus Query: 250 gcatcaactgtattctcgaacacaatctttccatctcgagaagccagcacaacacctcca 309 ||||||| ||| |||||| |||| || || ||||| |||||||| | ||||||||||||| Sbjct: 620 gcatcaagtgtgttctcgcacacgattttcccatcacgagaagctaacacaacacctcca 561 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 490 tctttcaaccgaagcaagccctgaacaa 517 ||||||||||||||||| | |||||||| Sbjct: 380 tctttcaaccgaagcaaacactgaacaa 353
>gb|AY065119.1| Arabidopsis thaliana similar to vacuolar ATPases (F2P3.10) mRNA, complete cds Length = 1033 Score = 48.1 bits (24), Expect = 0.034 Identities = 51/60 (85%) Strand = Plus / Minus Query: 250 gcatcaactgtattctcgaacacaatctttccatctcgagaagccagcacaacacctcca 309 ||||||| ||| |||||| |||| || || ||||| |||||||| | ||||||||||||| Sbjct: 749 gcatcaagtgtgttctcgcacacgattttcccatcacgagaagctaacacaacacctcca 690 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 490 tctttcaaccgaagcaagccctgaacaa 517 ||||||||||||||||| | |||||||| Sbjct: 509 tctttcaaccgaagcaaacactgaacaa 482
>emb|BX827529.1|CNS0A2RF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS6ZG09 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 770 Score = 48.1 bits (24), Expect = 0.034 Identities = 51/60 (85%) Strand = Plus / Minus Query: 250 gcatcaactgtattctcgaacacaatctttccatctcgagaagccagcacaacacctcca 309 ||||||| ||| |||||| |||| || || ||||| |||||||| | ||||||||||||| Sbjct: 471 gcatcaagtgtgttctcgcacacgattttcccatcacgagaagctaacacaacacctcca 412 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 490 tctttcaaccgaagcaagccctgaacaa 517 ||||||||||||||||| | |||||||| Sbjct: 231 tctttcaaccgaagcaaacactgaacaa 204
>emb|BX826893.1|CNS0A2D0 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB73ZB05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1010 Score = 48.1 bits (24), Expect = 0.034 Identities = 51/60 (85%) Strand = Plus / Minus Query: 250 gcatcaactgtattctcgaacacaatctttccatctcgagaagccagcacaacacctcca 309 ||||||| ||| |||||| |||| || || ||||| |||||||| | ||||||||||||| Sbjct: 709 gcatcaagtgtgttctcgcacacgattttcccatcacgagaagctaacacaacacctcca 650 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 490 tctttcaaccgaagcaagccctgaacaa 517 ||||||||||||||||| | |||||||| Sbjct: 469 tctttcaaccgaagcaaacactgaacaa 442
>emb|X92118.1|MCVATPASE M.crystallinum mRNA for vacuolar proton ATPase subunit E Length = 1070 Score = 48.1 bits (24), Expect = 0.034 Identities = 39/44 (88%) Strand = Plus / Minus Query: 262 ttctcgaacacaatctttccatctcgagaagccagcacaacacc 305 ||||| ||||||||||| ||||||| |||||||| |||||||| Sbjct: 680 ttctcaaacacaatcttgccatctctagaagccataacaacacc 637
>emb|X92117.1|ATVATPASE A.thaliana mRNA for vacuolar proton ATPase subunit E Length = 949 Score = 48.1 bits (24), Expect = 0.034 Identities = 51/60 (85%) Strand = Plus / Minus Query: 250 gcatcaactgtattctcgaacacaatctttccatctcgagaagccagcacaacacctcca 309 ||||||| ||| |||||| |||| || || ||||| |||||||| | ||||||||||||| Sbjct: 726 gcatcaagtgtgttctcgcacacgattttcccatcacgagaagctaacacaacacctcca 667 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 490 tctttcaaccgaagcaagccctgaacaa 517 ||||||||||||||||| | |||||||| Sbjct: 486 tctttcaaccgaagcaaacactgaacaa 459
>gb|AY106923.1| Zea mays PCO133385 mRNA sequence Length = 1211 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Minus Query: 271 acaatctttccatctcgagaagccagcacaac 302 ||||||||||||||||| ||||| |||||||| Sbjct: 805 acaatctttccatctcgggaagctagcacaac 774
>gb|AF080120.1|F2P3 Arabidopsis thaliana BAC F2P3 Length = 74406 Score = 48.1 bits (24), Expect = 0.034 Identities = 51/60 (85%) Strand = Plus / Plus Query: 250 gcatcaactgtattctcgaacacaatctttccatctcgagaagccagcacaacacctcca 309 ||||||| ||| |||||| |||| || || ||||| |||||||| | ||||||||||||| Sbjct: 20072 gcatcaagtgtgttctcgcacacgattttcccatcacgagaagctaacacaacacctcca 20131
>gb|AF009338.1|AF009338 Gossypium hirsutum vacuolar H+-ATPase subunit E mRNA, complete cds Length = 989 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Minus Query: 259 gtattctcgaacacaatctttccatctcgaga 290 |||||||| |||||||| |||||||||||||| Sbjct: 655 gtattctcaaacacaatttttccatctcgaga 624
>emb|AJ245933.1|BVU245933 Beta vulgaris partial mRNA for V-type H(+)-ATPase subunit E Length = 558 Score = 46.1 bits (23), Expect = 0.13 Identities = 59/71 (83%) Strand = Plus / Minus Query: 460 tctttgcggcagcggagcagtacagctggctctttcaaccgaagcaagccctgaacaaca 519 ||||| |||||||| | || ||||| || |||||||| | |||||| | |||||||||| Sbjct: 389 tctttccggcagcgcaacaacacagcaggttctttcaatctaagcaaactctgaacaaca 330 Query: 520 agttctttcaa 530 || |||||||| Sbjct: 329 agctctttcaa 319
>ref|NM_105094.1| Arabidopsis thaliana VHA-E3; hydrogen-transporting ATP synthase, rotational mechanism / hydrogen-transporting ATPase, rotational mechanism AT1G64200 (VHA-E3) mRNA, complete cds Length = 714 Score = 42.1 bits (21), Expect = 2.1 Identities = 45/53 (84%) Strand = Plus / Minus Query: 204 ctttcggatctctggcaatttcttgcggaagacaacttcaagccttgcatcaa 256 ||||||||||||||| | ||| ||||||||| |||| || | ||| ||||||| Sbjct: 684 ctttcggatctctggaagtttattgcggaaggcaacctccaacctcgcatcaa 632
>ref|NM_188514.1| Oryza sativa (japonica cultivar-group), Ozsa8183 predicted mRNA Length = 693 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 274 atctttccatctcgagaagccagcacaac 302 |||||||||||||| ||||| |||||||| Sbjct: 596 atctttccatctcgggaagctagcacaac 568 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Minus Query: 481 acagctggctctttcaaccgaagcaagccctgaacaa 517 ||||||||||| ||||| || ||||||| |||||||| Sbjct: 389 acagctggctccttcaaacgcagcaagctctgaacaa 353
>gb|BT013542.1| Lycopersicon esculentum clone 132262F, mRNA sequence Length = 936 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Minus Query: 269 acacaatctttccatctcgagaagccagcacaacacctcca 309 ||||||| || ||||||||||||||||| || || |||||| Sbjct: 686 acacaattttcccatctcgagaagccagtaccactcctcca 646
>dbj|AP001800.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0443E05 Length = 176935 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 274 atctttccatctcgagaagccagcacaac 302 |||||||||||||| ||||| |||||||| Sbjct: 51432 atctttccatctcgggaagctagcacaac 51460
>emb|AJ538752.1|NTA538752 Nicotiana tabacum cDNA-AFLP-fragment BC43-M1-018 Length = 354 Score = 42.1 bits (21), Expect = 2.1 Identities = 69/85 (81%) Strand = Plus / Plus Query: 211 atctctggcaatttcttgcggaagacaacttcaagccttgcatcaactgtattctcgaac 270 ||||| |||| ||| || ||||| |||||||| | || ||||||| ||| ||||| | Sbjct: 73 atctcgggcagttttttacggaacacaacttccaatctggcatcaagtgtgttctcacaa 132 Query: 271 acaatctttccatctcgagaagcca 295 ||||| || |||||||||||||||| Sbjct: 133 acaattttcccatctcgagaagcca 157
>dbj|AK072778.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023139P14, full insert sequence Length = 1162 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 274 atctttccatctcgagaagccagcacaac 302 |||||||||||||| ||||| |||||||| Sbjct: 720 atctttccatctcgggaagctagcacaac 692 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Minus Query: 481 acagctggctctttcaaccgaagcaagccctgaacaa 517 ||||||||||| ||||| || ||||||| |||||||| Sbjct: 513 acagctggctccttcaaacgcagcaagctctgaacaa 477
>gb|U23139.1| Caenorhabditis elegans cosmid F13H8, complete sequence Length = 37794 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 549 gtggttgctgctgatattga 568 |||||||||||||||||||| Sbjct: 2353 gtggttgctgctgatattga 2372
>ref|XM_362267.1| Magnaporthe grisea 70-15 hypothetical protein (MG04712.4) partial cds Length = 1746 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 547 tggtggttgctgctgatattgagg 570 ||||||||| |||||||||||||| Sbjct: 1107 tggtggttgttgctgatattgagg 1084
>ref|XM_460952.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0F14685g) partial mRNA Length = 3144 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 400 gcttttgatgcatattcatt 419 |||||||||||||||||||| Sbjct: 1808 gcttttgatgcatattcatt 1789
>gb|AC148868.3| Pan troglodytes BAC clone CH251-126E24 from Y, complete sequence Length = 170533 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 gaacacaatctttccatctc 286 |||||||||||||||||||| Sbjct: 59200 gaacacaatctttccatctc 59181
>gb|AY338875.1| Genista tenera isolate BG11 CYCLOIDEA-like group 1B protein gene, partial cds Length = 1371 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 caataatgaacaaataggta 46 |||||||||||||||||||| Sbjct: 599 caataatgaacaaataggta 618
>gb|AY198279.1| Peronospora alsinearum internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence Length = 797 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 547 tggtggttgctgctgatatt 566 |||||||||||||||||||| Sbjct: 58 tggtggttgctgctgatatt 77
>gb|AC146578.2| Pan troglodytes BAC clone CH251-86G3 from Y, complete sequence Length = 188850 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 gaacacaatctttccatctc 286 |||||||||||||||||||| Sbjct: 21831 gaacacaatctttccatctc 21812
>gb|AC144459.8| Medicago truncatula clone mth2-23o13, complete sequence Length = 114098 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 ttaaacaacaatgttcgcaa 93 |||||||||||||||||||| Sbjct: 79709 ttaaacaacaatgttcgcaa 79690
>gb|AY061695.1| Russula nigricans 217RUF24 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S large subunit ribosomal RNA gene, partial sequence Length = 693 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 290 aagccagcacaacacctcca 309 |||||||||||||||||||| Sbjct: 483 aagccagcacaacacctcca 464
>emb|AL133214.12| Human DNA sequence from clone RP11-163F8 on chromosome 9p21.2-23 Contains the 3' end of a novel gene (FLJ20276), the 5' end of the SH3GL2 gene for SH3-domain GRB2-like 2 (CNSA2, SH3P4, EEN-B1, SH3D2A), a poly(A)-binding protein pseudogene and a CpG Island, complete sequence Length = 154621 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 263 tctcgaacacaatctttccatctc 286 |||||| ||||||||||||||||| Sbjct: 19861 tctcgagcacaatctttccatctc 19884
>emb|CR628337.1| Legionella pneumophila str. Lens complete genome Length = 3345687 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 419 tctttgctgaatgcagtacagatt 442 |||||||||||||||||| ||||| Sbjct: 2828535 tctttgctgaatgcagtatagatt 2828558
>emb|CR382138.1| Debaryomyces hansenii chromosome F of strain CBS767 of Debaryomyces hansenii Length = 2336804 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 400 gcttttgatgcatattcatt 419 |||||||||||||||||||| Sbjct: 1177214 gcttttgatgcatattcatt 1177233
>emb|CR762461.7| Zebrafish DNA sequence from clone DKEY-32H6 in linkage group 13, complete sequence Length = 86411 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 576 cttcattgcatcctctttcatttt 599 ||||| |||||||||||||||||| Sbjct: 77755 cttcaatgcatcctctttcatttt 77732
>gb|AE017342.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 2, complete sequence Length = 1632307 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 atcaccaaaatacaagcacg 183 |||||||||||||||||||| Sbjct: 1522379 atcaccaaaatacaagcacg 1522398
>emb|CR556722.7| Zebrafish DNA sequence from clone CH211-195N12 in linkage group 13, complete sequence Length = 205873 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 576 cttcattgcatcctctttcatttt 599 ||||| |||||||||||||||||| Sbjct: 70636 cttcaatgcatcctctttcatttt 70613
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence Length = 23952694 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 gaacacaatctttccatctc 286 |||||||||||||||||||| Sbjct: 13153408 gaacacaatctttccatctc 13153389 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 gaacacaatctttccatctc 286 |||||||||||||||||||| Sbjct: 4746066 gaacacaatctttccatctc 4746085 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 gaacacaatctttccatctc 286 |||||||||||||||||||| Sbjct: 1090748 gaacacaatctttccatctc 1090767
>ref|NM_062850.2| Caenorhabditis elegans F13H8.5 (F13H8.5) mRNA, complete cds Length = 1808 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 549 gtggttgctgctgatattga 568 |||||||||||||||||||| Sbjct: 390 gtggttgctgctgatattga 371
>emb|BX826920.1|CNS0A38B Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB76ZC04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 731 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 490 tctttcaaccgaagcaagccctgaacaa 517 ||||||||||||||||| | |||||||| Sbjct: 166 tctttcaaccgaagcaaacactgaacaa 139
>gb|AC149094.4| Pan troglodytes BAC clone CH251-268E10 from chromosome y, complete sequence Length = 175247 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 gaacacaatctttccatctc 286 |||||||||||||||||||| Sbjct: 116026 gaacacaatctttccatctc 116045
>gb|AC148874.4| Pan troglodytes BAC clone CH251-429C12 from chromosome y, complete sequence Length = 168193 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 gaacacaatctttccatctc 286 |||||||||||||||||||| Sbjct: 19880 gaacacaatctttccatctc 19899
>gb|AC156943.1| Pan troglodytes BAC clone CH251-607J5 from chromosome y, complete sequence Length = 193730 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 gaacacaatctttccatctc 286 |||||||||||||||||||| Sbjct: 11954 gaacacaatctttccatctc 11935
>gb|BT004242.1| Arabidopsis thaliana clone RAFL15-22-H20 (R20661) Length = 1896 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 caatctttccatctcgagaa 291 |||||||||||||||||||| Sbjct: 755 caatctttccatctcgagaa 774
>dbj|AB076987.1| Cytisus racemosus CrCYC2 gene, partial cds Length = 453 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 caataatgaacaaataggta 46 |||||||||||||||||||| Sbjct: 270 caataatgaacaaataggta 289
>emb|AM113962.1| Russula nigricans 18S rRNA gene (partial), ITS1, 5.8S rRNA gene, ITS2 and 25S rRNA gene (partial), specimen voucher MC01-511 Length = 629 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 290 aagccagcacaacacctcca 309 |||||||||||||||||||| Sbjct: 453 aagccagcacaacacctcca 434
>gb|AC159650.5| Pan troglodytes BAC clone CH251-379D1 from chromosome y, complete sequence Length = 214370 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 gaacacaatctttccatctc 286 |||||||||||||||||||| Sbjct: 148386 gaacacaatctttccatctc 148367 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,499,597 Number of Sequences: 3902068 Number of extensions: 5499597 Number of successful extensions: 100292 Number of sequences better than 10.0: 65 Number of HSP's better than 10.0 without gapping: 67 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 100010 Number of HSP's gapped (non-prelim): 274 length of query: 603 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 580 effective length of database: 17,143,297,704 effective search space: 9943112668320 effective search space used: 9943112668320 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)