ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags12f02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|X82149.1|TAVDAC2 T.aestivum VDAC2 mRNA for voltage dependent... 842 0.0
2ref|XM_475771.1| Oryza sativa (japonica cultivar-group), predic... 232 1e-57
3emb|AJ251562.1|OSA251562 Oryza sativa mRNA for voltage-dependent... 232 1e-57
4dbj|AK071833.1| Oryza sativa (japonica cultivar-group) cDNA clon... 232 1e-57
5gb|AC097112.2| Oryza sativa (japonica cultivar-group) chromosome... 165 2e-37
6dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 165 2e-37
7gb|AF178952.1|AF178952 Zea mays voltage-dependent anion channel ... 123 8e-25
8gb|AY104198.1| Zea mays PCO099812 mRNA sequence 123 8e-25
9ref|NM_191753.1| Oryza sativa (japonica cultivar-group), predic... 82 3e-12
10dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 82 3e-12
11dbj|AP003288.3| Oryza sativa (japonica cultivar-group) genomic D... 82 3e-12
12dbj|AP003408.3| Oryza sativa (japonica cultivar-group) genomic D... 82 3e-12
13gb|AC132491.2| Oryza sativa (japonica cultivar-group) chromosome... 60 1e-05
14gb|AC130611.2| Oryza sativa (japonica cultivar-group) chromosome... 60 1e-05
15gb|AC124836.2| Oryza sativa (japonica cultivar-group) chromosome... 58 4e-05
16gb|BT016491.1| Zea mays clone Contig324 mRNA sequence 56 1e-04
17gb|AY316739.1| Lotus corniculatus var. japonicus VDAC1.3 mRNA, c... 56 1e-04
18gb|AF178951.1|AF178951 Zea mays voltage-dependent anion channel ... 56 1e-04
19gb|AC165163.2| Mus musculus BAC clone RP23-146B12 from chromosom... 54 6e-04
20gb|AC167566.1| Mus musculus BAC clone RP24-84B10 from chromosome... 54 6e-04
21ref|XM_450604.1| Oryza sativa (japonica cultivar-group), mRNA 50 0.009
22gb|BT012680.1| Lycopersicon esculentum clone 113526R, mRNA sequence 50 0.009
23dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.009
24dbj|AP005508.3| Oryza sativa (japonica cultivar-group) genomic D... 50 0.009
25emb|Y18104.1|OSA18104 Oryza sativa mRNA for voltage-dependent an... 50 0.009
26dbj|AK072129.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.009
27dbj|AK061261.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.009
28dbj|AK060652.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.009
29gb|AY316737.1| Lotus corniculatus var. japonicus VDAC1.1 mRNA, c... 46 0.14
30emb|X74799.1|PAAS4EF P.anserina AS4 gene for translation elongat... 46 0.14
31dbj|AP006116.1| Lotus japonicus genomic DNA, chromosome 1, clone... 46 0.14
32dbj|AP004901.1| Lotus japonicus genomic DNA, chromosome 1, clone... 46 0.14
33gb|AC145450.4| Mus musculus strain C57BL/6J clone rp23-430i3, co... 44 0.57
34emb|X77733.1|TAVDAC1 T.aestivum VDAC 1 mRNA 44 0.57
35emb|AL732585.8| Mouse DNA sequence from clone RP23-226M2 on chro... 44 0.57
36ref|NM_192554.1| Oryza sativa (japonica cultivar-group), predic... 42 2.2
37ref|XM_418162.1| PREDICTED: Gallus gallus similar to type I hair... 42 2.2
38gb|AC147648.4| Homo sapiens BAC clone RP11-1413M17 from UL, comp... 42 2.2
39gb|BT014102.1| Lycopersicon esculentum clone 133206R, mRNA sequence 42 2.2
40gb|AC145613.2| Homo sapiens BAC clone RP11-1266H24 from UL, comp... 42 2.2
41gb|AC158763.6| Mus musculus chromosome 18, clone RP23-343L17, co... 42 2.2
42emb|X80387.1|STPORIN2 S.tuberosum pPOM36II mRNA for 36kDa porinII 42 2.2
43emb|X80386.1|STPORIN1 S.tuberosum pPOM34 mRNA for mitochondrial ... 42 2.2
44dbj|AP003300.4| Oryza sativa (japonica cultivar-group) genomic D... 42 2.2
45gb|AC025226.4|AC025226 Homo sapiens BAC clone RP11-57J19 from Y,... 42 2.2
46emb|AJ251563.1|OSA251563 Oryza sativa mRNA for voltage-dependent... 42 2.2
47dbj|AK104419.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.2
48dbj|AK104055.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.2
49dbj|AK070745.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.2
50gb|AC183761.3| Pan troglodytes BAC clone CH251-710C5 from chromo... 40 8.9
51gb|AC110177.19| Mus musculus chromosome 1, clone RP24-245K23, co... 40 8.9
52gb|AC122234.4| Mus musculus BAC clone RP23-138M13 from chromosom... 40 8.9
53gb|CP000051.1| Chlamydia trachomatis A/HAR-13, complete genome 40 8.9
54gb|AC122855.4| Mus musculus BAC clone RP23-120H20 from chromosom... 40 8.9
55gb|AY445665.1| Photorhabdus luminescens putative toxin transport... 40 8.9
56gb|AC125172.4| Mus musculus BAC clone RP24-492I4 from chromosome... 40 8.9
57gb|AC092637.2| Homo sapiens BAC clone RP11-358M3 from 7, complet... 40 8.9
58gb|AC153894.8| Mus musculus 6 BAC RP23-118E20 (Roswell Park Canc... 40 8.9
59emb|AJ616216.2| Takifugu rubripes ifng gene for interferon gamma... 40 8.9
60emb|X80388.1|STPORIN3 S.tuberosum pPOM36I mRNA for 36kDA porinI 40 8.9
61dbj|AK159001.1| Mus musculus visual cortex cDNA, RIKEN full-leng... 40 8.9
62gb|AE001273.1| Chlamydia trachomatis D/UW-3/CX, complete genome 40 8.9
63dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 40 8.9
64gb|AC154461.2| Mus musculus BAC clone RP24-163I13 from 14, compl... 40 8.9
65gb|AY106124.1| Zea mays PCO123686 mRNA sequence 40 8.9
66emb|CT025626.11| Mouse DNA sequence from clone RP24-141G14 on ch... 40 8.9
67gb|AC154013.4| Mus musculus 6 BAC RP24-124B23 (Roswell Park Canc... 40 8.9
68gb|AC154176.5| Mus musculus BAC clone RP23-463F22 from chromosom... 40 8.9
69gb|AC129184.3| Mus musculus BAC clone RP23-358F24 from 5, comple... 40 8.9 
>emb|X82149.1|TAVDAC2 T.aestivum VDAC2 mRNA for voltage dependent anion channel
          Length = 1174

 Score =  842 bits (425), Expect = 0.0
 Identities = 571/612 (93%), Gaps = 7/612 (1%)
 Strand = Plus / Minus

                                                                        
Query: 43   atacgctcgtgcataacggccagtagcacatatcaactgggtagcaaacccc-tcgggta 101
            |||||| ||||||||||| ||||||||||| |||||| |||||| ||||||| || ||||
Sbjct: 1025 atacgcccgtgcataacgaccagtagcacagatcaacagggtagaaaaccccctcaggta 966

                                                                        
Query: 102  g--caggctaaaaa-cgacagcataagtttgtcgcatcaccaaagttgggcattacaagt 158
            |  ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 965  gaacaggctaaaaaacgacag-ataagtttgtcgcatcaccaaagttgggcattacaagt 907

                                                                        
Query: 159  tccgtccgtccaa-gctttgttcactggaccaagnagctgatggtaccaaaatgctagca 217
            |||||| |||||| ||||||||| |||||||||| ||||||||||||| |||||||||||
Sbjct: 906  tccgtctgtccaaagctttgttcgctggaccaag-agctgatggtaccgaaatgctagca 848

                                                                        
Query: 218  tcctaatgcacccgcaaatcccacatcagggcttgagtgacagggccagcccgaacttgg 277
            |||||| |||||||| ||||||| |||||||||||||||||||||||||||| |||||||
Sbjct: 847  tcctaacgcacccgcgaatcccaaatcagggcttgagtgacagggccagcccaaacttgg 788

                                                                        
Query: 278  ggctcttctcaacggccttggtatcaacctcggtggagaaggtgatgacagacttgggcc 337
            |||||||||||| ||||||||| ||||||||||||||||||||||||| |||||||||||
Sbjct: 787  ggctcttctcaatggccttggtgtcaacctcggtggagaaggtgatgagagacttgggcc 728

                                                                        
Query: 338  tccacgcgtgctggatgagcgcacttgcgatgccaaagttgttgtagcgccccttaaggg 397
            |||||||||||||||||||||||||||||| ||| ||||||||||| |||||||| |  |
Sbjct: 727  tccacgcgtgctggatgagcgcacttgcgacgccgaagttgttgtaacgccccttcacag 668

                                                                        
Query: 398  tggtcagggggtccagctcgtgctgcgtccccacggtgatggtgttctcgttgctcgaga 457
            ||||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||||
Sbjct: 667  tggtcagggggtccagctcgtgctgcgtcccaatggtgatggtgttctcgttgcttgaga 608

                                                                        
Query: 458  agctgtgagcgatctctgctcccacagcagtggtgagctgcacctggtggtagtaggaag 517
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 607  agctgtgagcgatctctgctcccacagcagtggtgcgctgcacctggtggtagtaggaag 548

                                                                        
Query: 518  cagccagggtgtttcccttgttgttcagcatcaacgaagcagtaagatcttggttagtat 577
            |||||||||||||| |||||||||||||  |||||||||||||||||||||||||||| |
Sbjct: 547  cagccagggtgtttaccttgttgttcagattcaacgaagcagtaagatcttggttagtgt 488

                                                                        
Query: 578  ggctcattccagcattgtacttggtgaagtccccagaggcagtatcaaatgcaacatcaa 637
            |||||| |||||||||||||||||||||||| ||||||||||| ||||||||||||||||
Sbjct: 487  ggctcagtccagcattgtacttggtgaagtcaccagaggcagtgtcaaatgcaacatcaa 428

                        
Query: 638  gaccaaaagcaa 649
             |||||||||||
Sbjct: 427  caccaaaagcaa 416
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>ref|XM_475771.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 843

 Score =  232 bits (117), Expect = 1e-57
 Identities = 326/393 (82%), Gaps = 2/393 (0%)
 Strand = Plus / Minus

                                                                       
Query: 258 cagggccagcccgaacttggggctcttctcaacggccttggtatcaacctcggtggagaa 317
           ||||| |||||| | ||||| |||||| || | |||||||||||||||||| ||||||| 
Sbjct: 828 cagggacagcccaaccttggagctcttgtcgatggccttggtatcaacctcagtggagat 769

                                                                       
Query: 318 ggtgatgacagacttgggcctccacgcgtgctggatgagcgcacttgcgatgccaaagtt 377
           ||||| ||  |||||||||||  || ||||||||||||||||||| || |||||||||||
Sbjct: 768 ggtgacgagcgacttgggcctgaactcgtgctggatgagcgcactggccatgccaaagtt 709

                                                                       
Query: 378 gttgtagcgccccttaagggtggtcagggggtccagctcgtgctgcgtccccacggtgat 437
           |||| ||||| |||| |  || || ||    |||||  | ||||| ||||| | ||||| 
Sbjct: 708 gttgaagcgcgccttcacagtagtgagttcatccagggcatgctgtgtcccgaaggtgag 649

                                                                       
Query: 438 ggtgttctcgttgctcgagaagctgtgagcgatctctgctcccacagcagtggtga-gct 496
            ||||||||||||||||||||||||||||| | ||||||||| |||||| | ||   |||
Sbjct: 648 agtgttctcgttgctcgagaagctgtgagccagctctgctccaacagcacttgttttgct 589

                                                                       
Query: 497 gcacctggtggtagtaggaagcagccagggtgtttcccttgttgttcagcatcaacgaag 556
            ||||| |||||||||||||||||| ||| ||| ||||||||||||||| | ||  |  |
Sbjct: 588 -caccttgtggtagtaggaagcagcaaggctgtctcccttgttgttcagaagcagtgctg 530

                                                                       
Query: 557 cagtaagatcttggttagtatggctcattccagcattgtacttggtgaagtccccagagg 616
           |||| |||||| |  |||| ||||||| ||| |||||||||||||||||||||||||  |
Sbjct: 529 cagtgagatctggagtagtgtggctcagtcccgcattgtacttggtgaagtccccagttg 470

                                            
Query: 617 cagtatcaaatgcaacatcaagaccaaaagcaa 649
           ||||||||||||||||||||  ||||| |||||
Sbjct: 469 cagtatcaaatgcaacatcagtaccaacagcaa 437
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>emb|AJ251562.1|OSA251562 Oryza sativa mRNA for voltage-dependent anion channel (VDAC2 gene)
          Length = 1189

 Score =  232 bits (117), Expect = 1e-57
 Identities = 326/393 (82%), Gaps = 2/393 (0%)
 Strand = Plus / Minus

                                                                       
Query: 258 cagggccagcccgaacttggggctcttctcaacggccttggtatcaacctcggtggagaa 317
           ||||| |||||| | ||||| |||||| || | |||||||||||||||||| ||||||| 
Sbjct: 867 cagggacagcccaaccttggagctcttgtcgatggccttggtatcaacctcagtggagat 808

                                                                       
Query: 318 ggtgatgacagacttgggcctccacgcgtgctggatgagcgcacttgcgatgccaaagtt 377
           ||||| ||  |||||||||||  || ||||||||||||||||||| || |||||||||||
Sbjct: 807 ggtgacgagcgacttgggcctgaactcgtgctggatgagcgcactggccatgccaaagtt 748

                                                                       
Query: 378 gttgtagcgccccttaagggtggtcagggggtccagctcgtgctgcgtccccacggtgat 437
           |||| ||||| |||| |  || || ||    |||||  | ||||| ||||| | ||||| 
Sbjct: 747 gttgaagcgcgccttcacagtagtgagttcatccagggcatgctgtgtcccgaaggtgag 688

                                                                       
Query: 438 ggtgttctcgttgctcgagaagctgtgagcgatctctgctcccacagcagtggtga-gct 496
            ||||||||||||||||||||||||||||| | ||||||||| |||||| | ||   |||
Sbjct: 687 agtgttctcgttgctcgagaagctgtgagccagctctgctccaacagcacttgttttgct 628

                                                                       
Query: 497 gcacctggtggtagtaggaagcagccagggtgtttcccttgttgttcagcatcaacgaag 556
            ||||| |||||||||||||||||| ||| ||| ||||||||||||||| | ||  |  |
Sbjct: 627 -caccttgtggtagtaggaagcagcaaggctgtctcccttgttgttcagaagcagtgctg 569

                                                                       
Query: 557 cagtaagatcttggttagtatggctcattccagcattgtacttggtgaagtccccagagg 616
           |||| |||||| |  |||| ||||||| ||| |||||||||||||||||||||||||  |
Sbjct: 568 cagtgagatctggagtagtgtggctcagtcccgcattgtacttggtgaagtccccagttg 509

                                            
Query: 617 cagtatcaaatgcaacatcaagaccaaaagcaa 649
           ||||||||||||||||||||  ||||| |||||
Sbjct: 508 cagtatcaaatgcaacatcagtaccaacagcaa 476
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>dbj|AK071833.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121K13, full
           insert sequence
          Length = 1231

 Score =  232 bits (117), Expect = 1e-57
 Identities = 326/393 (82%), Gaps = 2/393 (0%)
 Strand = Plus / Minus

                                                                       
Query: 258 cagggccagcccgaacttggggctcttctcaacggccttggtatcaacctcggtggagaa 317
           ||||| |||||| | ||||| |||||| || | |||||||||||||||||| ||||||| 
Sbjct: 911 cagggacagcccaaccttggagctcttgtcgatggccttggtatcaacctcagtggagat 852

                                                                       
Query: 318 ggtgatgacagacttgggcctccacgcgtgctggatgagcgcacttgcgatgccaaagtt 377
           ||||| ||  |||||||||||  || ||||||||||||||||||| || |||||||||||
Sbjct: 851 ggtgacgagcgacttgggcctgaactcgtgctggatgagcgcactggccatgccaaagtt 792

                                                                       
Query: 378 gttgtagcgccccttaagggtggtcagggggtccagctcgtgctgcgtccccacggtgat 437
           |||| ||||| |||| |  || || ||    |||||  | ||||| ||||| | ||||| 
Sbjct: 791 gttgaagcgcgccttcacagtagtgagttcatccagggcatgctgtgtcccgaaggtgag 732

                                                                       
Query: 438 ggtgttctcgttgctcgagaagctgtgagcgatctctgctcccacagcagtggtga-gct 496
            ||||||||||||||||||||||||||||| | ||||||||| |||||| | ||   |||
Sbjct: 731 agtgttctcgttgctcgagaagctgtgagccagctctgctccaacagcacttgttttgct 672

                                                                       
Query: 497 gcacctggtggtagtaggaagcagccagggtgtttcccttgttgttcagcatcaacgaag 556
            ||||| |||||||||||||||||| ||| ||| ||||||||||||||| | ||  |  |
Sbjct: 671 -caccttgtggtagtaggaagcagcaaggctgtctcccttgttgttcagaagcagtgctg 613

                                                                       
Query: 557 cagtaagatcttggttagtatggctcattccagcattgtacttggtgaagtccccagagg 616
           |||| |||||| |  |||| ||||||| ||| |||||||||||||||||||||||||  |
Sbjct: 612 cagtgagatctggagtagtgtggctcagtcccgcattgtacttggtgaagtccccagttg 553

                                            
Query: 617 cagtatcaaatgcaacatcaagaccaaaagcaa 649
           ||||||||||||||||||||  ||||| |||||
Sbjct: 552 cagtatcaaatgcaacatcagtaccaacagcaa 520
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>gb|AC097112.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1741_B01,
             complete sequence
          Length = 147704

 Score =  165 bits (83), Expect = 2e-37
 Identities = 238/287 (82%), Gaps = 2/287 (0%)
 Strand = Plus / Minus

                                                                         
Query: 258   cagggccagcccgaacttggggctcttctcaacggccttggtatcaacctcggtggagaa 317
             ||||| |||||| | ||||| |||||| || | |||||||||||||||||| ||||||| 
Sbjct: 69059 cagggacagcccaaccttggagctcttgtcgatggccttggtatcaacctcagtggagat 69000

                                                                         
Query: 318   ggtgatgacagacttgggcctccacgcgtgctggatgagcgcacttgcgatgccaaagtt 377
             ||||| ||  |||||||||||  || ||||||||||||||||||| || |||||||||||
Sbjct: 68999 ggtgacgagcgacttgggcctgaactcgtgctggatgagcgcactggccatgccaaagtt 68940

                                                                         
Query: 378   gttgtagcgccccttaagggtggtcagggggtccagctcgtgctgcgtccccacggtgat 437
             |||| ||||| |||| |  || || ||    |||||  | ||||| ||||| | ||||| 
Sbjct: 68939 gttgaagcgcgccttcacagtagtgagttcatccagggcatgctgtgtcccgaaggtgag 68880

                                                                         
Query: 438   ggtgttctcgttgctcgagaagctgtgagcgatctctgctcccacagca-gtggtgagct 496
              ||||||||||||||||||||||||||||| | ||||||||| ||||||  || |  |||
Sbjct: 68879 agtgttctcgttgctcgagaagctgtgagccagctctgctccaacagcacttgttttgct 68820

                                                            
Query: 497   gcacctggtggtagtaggaagcagccagggtgtttcccttgttgttc 543
              ||||| |||||||||||||||||| ||| ||| |||||||||||||
Sbjct: 68819 -caccttgtggtagtaggaagcagcaaggctgtctcccttgttgttc 68774



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 70/78 (89%)
 Strand = Plus / Minus

                                                                         
Query: 572   tagtatggctcattccagcattgtacttggtgaagtccccagaggcagtatcaaatgcaa 631
             |||| ||||||| ||| |||||||||||||||||||||||||  ||||||||||||||||
Sbjct: 68358 tagtgtggctcagtcccgcattgtacttggtgaagtccccagttgcagtatcaaatgcaa 68299

                               
Query: 632   catcaagaccaaaagcaa 649
             |||||  ||||| |||||
Sbjct: 68298 catcagtaccaacagcaa 68281
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  165 bits (83), Expect = 2e-37
 Identities = 238/287 (82%), Gaps = 2/287 (0%)
 Strand = Plus / Minus

                                                                            
Query: 258      cagggccagcccgaacttggggctcttctcaacggccttggtatcaacctcggtggagaa 317
                ||||| |||||| | ||||| |||||| || | |||||||||||||||||| ||||||| 
Sbjct: 26424368 cagggacagcccaaccttggagctcttgtcgatggccttggtatcaacctcagtggagat 26424309

                                                                            
Query: 318      ggtgatgacagacttgggcctccacgcgtgctggatgagcgcacttgcgatgccaaagtt 377
                ||||| ||  |||||||||||  || ||||||||||||||||||| || |||||||||||
Sbjct: 26424308 ggtgacgagcgacttgggcctgaactcgtgctggatgagcgcactggccatgccaaagtt 26424249

                                                                            
Query: 378      gttgtagcgccccttaagggtggtcagggggtccagctcgtgctgcgtccccacggtgat 437
                |||| ||||| |||| |  || || ||    |||||  | ||||| ||||| | ||||| 
Sbjct: 26424248 gttgaagcgcgccttcacagtagtgagttcatccagggcatgctgtgtcccgaaggtgag 26424189

                                                                            
Query: 438      ggtgttctcgttgctcgagaagctgtgagcgatctctgctcccacagca-gtggtgagct 496
                 ||||||||||||||||||||||||||||| | ||||||||| ||||||  || |  |||
Sbjct: 26424188 agtgttctcgttgctcgagaagctgtgagccagctctgctccaacagcacttgttttgct 26424129

                                                               
Query: 497      gcacctggtggtagtaggaagcagccagggtgtttcccttgttgttc 543
                 ||||| |||||||||||||||||| ||| ||| |||||||||||||
Sbjct: 26424128 -caccttgtggtagtaggaagcagcaaggctgtctcccttgttgttc 26424083



 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 70/78 (89%)
 Strand = Plus / Minus

                                                                            
Query: 572      tagtatggctcattccagcattgtacttggtgaagtccccagaggcagtatcaaatgcaa 631
                |||| ||||||| ||| |||||||||||||||||||||||||  ||||||||||||||||
Sbjct: 26423667 tagtgtggctcagtcccgcattgtacttggtgaagtccccagttgcagtatcaaatgcaa 26423608

                                  
Query: 632      catcaagaccaaaagcaa 649
                |||||  ||||| |||||
Sbjct: 26423607 catcagtaccaacagcaa 26423590



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                              
Query: 498      cacctggtggtagtaggaagcagccagggtgtttcccttgttgttc 543
                ||||| |||||||||||||||||| ||| ||| |||||||||||||
Sbjct: 25619670 caccttgtggtagtaggaagcagcaaggctgtctcccttgttgttc 25619625



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 53/61 (86%)
 Strand = Plus / Plus

                                                                            
Query: 589      gcattgtacttggtgaagtccccagaggcagtatcaaatgcaacatcaagaccaaaagca 648
                |||||||||||||||||||  |||   |||||||||||||||||||||  ||||| ||||
Sbjct: 20516167 gcattgtacttggtgaagtttccactcgcagtatcaaatgcaacatcagtaccaacagca 20516226

                 
Query: 649      a 649
                |
Sbjct: 20516227 a 20516227
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>gb|AF178952.1|AF178952 Zea mays voltage-dependent anion channel protein 2 (vdac2) mRNA,
           complete cds; nuclear gene for mitochondrial product
          Length = 1129

 Score =  123 bits (62), Expect = 8e-25
 Identities = 155/186 (83%)
 Strand = Plus / Minus

                                                                       
Query: 279 gctcttctcaacggccttggtatcaacctcggtggagaaggtgatgacagacttgggcct 338
           ||||||||| | ||||||||| || ||||| ||||||| |||||  |  |||||||||||
Sbjct: 881 gctcttctcgatggccttggtgtccacctccgtggagatggtgaccagtgacttgggcct 822

                                                                       
Query: 339 ccacgcgtgctggatgagcgcacttgcgatgccaaagttgttgtagcgccccttaagggt 398
           |||| |||| ||||| || |||||||| |||||  |||||||| ||||  |||| |  ||
Sbjct: 821 ccactcgtgttggatcagtgcacttgccatgccgtagttgttgaagcgtgccttcacagt 762

                                                                       
Query: 399 ggtcagggggtccagctcgtgctgcgtccccacggtgatggtgttctcgttgctcgagaa 458
           |||||| ||||||||  | ||||||||||| | ||||||||||||| ||||| |||||||
Sbjct: 761 ggtcagagggtccagggcatgctgcgtcccaaaggtgatggtgttcccgttggtcgagaa 702

                 
Query: 459 gctgtg 464
           ||||||
Sbjct: 701 gctgtg 696



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 52/58 (89%)
 Strand = Plus / Minus

                                                                     
Query: 579 gctcattccagcattgtacttggtgaagtccccagaggcagtatcaaatgcaacatca 636
           ||||| |||||||||||| ||||| ||||||||||| | ||||||||||||| |||||
Sbjct: 581 gctcagtccagcattgtatttggttaagtccccagaagaagtatcaaatgcagcatca 524
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>gb|AY104198.1| Zea mays PCO099812 mRNA sequence
          Length = 1156

 Score =  123 bits (62), Expect = 8e-25
 Identities = 155/186 (83%)
 Strand = Plus / Minus

                                                                       
Query: 279 gctcttctcaacggccttggtatcaacctcggtggagaaggtgatgacagacttgggcct 338
           ||||||||| | ||||||||| || ||||| ||||||| |||||  |  |||||||||||
Sbjct: 915 gctcttctcgatggccttggtgtccacctccgtggagatggtgaccagtgacttgggcct 856

                                                                       
Query: 339 ccacgcgtgctggatgagcgcacttgcgatgccaaagttgttgtagcgccccttaagggt 398
           |||| |||| ||||| || |||||||| |||||  |||||||| ||||  |||| |  ||
Sbjct: 855 ccactcgtgttggatcagtgcacttgccatgccgtagttgttgaagcgtgccttcacagt 796

                                                                       
Query: 399 ggtcagggggtccagctcgtgctgcgtccccacggtgatggtgttctcgttgctcgagaa 458
           |||||| ||||||||  | ||||||||||| | ||||||||||||| ||||| |||||||
Sbjct: 795 ggtcagagggtccagggcatgctgcgtcccaaaggtgatggtgttcccgttggtcgagaa 736

                 
Query: 459 gctgtg 464
           ||||||
Sbjct: 735 gctgtg 730



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 52/58 (89%)
 Strand = Plus / Minus

                                                                     
Query: 579 gctcattccagcattgtacttggtgaagtccccagaggcagtatcaaatgcaacatca 636
           ||||| |||||||||||| ||||| ||||||||||| | ||||||||||||| |||||
Sbjct: 615 gctcagtccagcattgtatttggttaagtccccagaagaagtatcaaatgcagcatca 558
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>ref|NM_191753.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 954

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 140/173 (80%)
 Strand = Plus / Minus

                                                                       
Query: 292 gccttggtatcaacctcggtggagaaggtgatgacagacttgggcctccacgcgtgctgg 351
           |||||||| || ||||||| |||||  || | || ||||||||| |||||| ||||||||
Sbjct: 905 gccttggtgtcgacctcggcggagagcgttaagaaagacttgggtctccactcgtgctgg 846

                                                                       
Query: 352 atgagcgcacttgcgatgccaaagttgttgtagcgccccttaagggtggtcagggggtcc 411
           ||||| || ||  | |||||   ||||||||||||| |||| | ||| || || ||||||
Sbjct: 845 atgagggcgctgaccatgccgtggttgttgtagcgcgccttcacggtagtgagagggtcc 786

                                                                
Query: 412 agctcgtgctgcgtccccacggtgatggtgttctcgttgctcgagaagctgtg 464
           ||  |||||||| |||| | | ||| ||||||||| ||| |||||||||||||
Sbjct: 785 agggcgtgctgcatcccgaagctgagggtgttctccttggtcgagaagctgtg 733



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 47/52 (90%)
 Strand = Plus / Minus

                                                               
Query: 585 tccagcattgtacttggtgaagtccccagaggcagtatcaaatgcaacatca 636
           |||||||| ||||||||||||||||||||  | |||||||| ||||||||||
Sbjct: 606 tccagcatcgtacttggtgaagtccccagtagaagtatcaactgcaacatca 555
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 140/173 (80%)
 Strand = Plus / Plus

                                                                            
Query: 292      gccttggtatcaacctcggtggagaaggtgatgacagacttgggcctccacgcgtgctgg 351
                |||||||| || ||||||| |||||  || | || ||||||||| |||||| ||||||||
Sbjct: 29763787 gccttggtgtcgacctcggcggagagcgttaagaaagacttgggtctccactcgtgctgg 29763846

                                                                            
Query: 352      atgagcgcacttgcgatgccaaagttgttgtagcgccccttaagggtggtcagggggtcc 411
                ||||| || ||  | |||||   ||||||||||||| |||| | ||| || || ||||||
Sbjct: 29763847 atgagggcgctgaccatgccgtggttgttgtagcgcgccttcacggtagtgagagggtcc 29763906

                                                                     
Query: 412      agctcgtgctgcgtccccacggtgatggtgttctcgttgctcgagaagctgtg 464
                ||  |||||||| |||| | | ||| ||||||||| ||| |||||||||||||
Sbjct: 29763907 agggcgtgctgcatcccgaagctgagggtgttctccttggtcgagaagctgtg 29763959



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                                    
Query: 585      tccagcattgtacttggtgaagtccccagaggcagtatcaaatgcaacatca 636
                |||||||| ||||||||||||||||||||  | |||||||| ||||||||||
Sbjct: 29764307 tccagcatcgtacttggtgaagtccccagtagaagtatcaactgcaacatca 29764358



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 48/57 (84%)
 Strand = Plus / Plus

                                                                         
Query: 587      cagcattgtacttggtgaagtccccagaggcagtatcaaatgcaacatcaagaccaa 643
                ||||||||||||||||||| |  | ||  ||||| || ||||||||||||| |||||
Sbjct: 22905175 cagcattgtacttggtgaaattgctagtcgcagtgtcgaatgcaacatcaacaccaa 22905231
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>dbj|AP003288.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0683B11
          Length = 155955

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 140/173 (80%)
 Strand = Plus / Plus

                                                                        
Query: 292  gccttggtatcaacctcggtggagaaggtgatgacagacttgggcctccacgcgtgctgg 351
            |||||||| || ||||||| |||||  || | || ||||||||| |||||| ||||||||
Sbjct: 7882 gccttggtgtcgacctcggcggagagcgttaagaaagacttgggtctccactcgtgctgg 7941

                                                                        
Query: 352  atgagcgcacttgcgatgccaaagttgttgtagcgccccttaagggtggtcagggggtcc 411
            ||||| || ||  | |||||   ||||||||||||| |||| | ||| || || ||||||
Sbjct: 7942 atgagggcgctgaccatgccgtggttgttgtagcgcgccttcacggtagtgagagggtcc 8001

                                                                 
Query: 412  agctcgtgctgcgtccccacggtgatggtgttctcgttgctcgagaagctgtg 464
            ||  |||||||| |||| | | ||| ||||||||| ||| |||||||||||||
Sbjct: 8002 agggcgtgctgcatcccgaagctgagggtgttctccttggtcgagaagctgtg 8054



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                                
Query: 585  tccagcattgtacttggtgaagtccccagaggcagtatcaaatgcaacatca 636
            |||||||| ||||||||||||||||||||  | |||||||| ||||||||||
Sbjct: 8402 tccagcatcgtacttggtgaagtccccagtagaagtatcaactgcaacatca 8453
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>dbj|AP003408.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1131B07
          Length = 109135

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 140/173 (80%)
 Strand = Plus / Plus

                                                                         
Query: 292   gccttggtatcaacctcggtggagaaggtgatgacagacttgggcctccacgcgtgctgg 351
             |||||||| || ||||||| |||||  || | || ||||||||| |||||| ||||||||
Sbjct: 93518 gccttggtgtcgacctcggcggagagcgttaagaaagacttgggtctccactcgtgctgg 93577

                                                                         
Query: 352   atgagcgcacttgcgatgccaaagttgttgtagcgccccttaagggtggtcagggggtcc 411
             ||||| || ||  | |||||   ||||||||||||| |||| | ||| || || ||||||
Sbjct: 93578 atgagggcgctgaccatgccgtggttgttgtagcgcgccttcacggtagtgagagggtcc 93637

                                                                  
Query: 412   agctcgtgctgcgtccccacggtgatggtgttctcgttgctcgagaagctgtg 464
             ||  |||||||| |||| | | ||| ||||||||| ||| |||||||||||||
Sbjct: 93638 agggcgtgctgcatcccgaagctgagggtgttctccttggtcgagaagctgtg 93690



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 47/52 (90%)
 Strand = Plus / Plus

                                                                 
Query: 585   tccagcattgtacttggtgaagtccccagaggcagtatcaaatgcaacatca 636
             |||||||| ||||||||||||||||||||  | |||||||| ||||||||||
Sbjct: 94038 tccagcatcgtacttggtgaagtccccagtagaagtatcaactgcaacatca 94089
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>gb|AC132491.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0599F04,
              complete sequence
          Length = 169073

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                            
Query: 498    cacctggtggtagtaggaagcagccagggtgtttcccttgttgttc 543
              ||||| |||||||||||||||||| ||| ||| |||||||||||||
Sbjct: 136077 caccttgtggtagtaggaagcagcaaggctgtctcccttgttgttc 136032
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>gb|AC130611.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0483D07,
             complete sequence
          Length = 147122

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 42/46 (91%)
 Strand = Plus / Minus

                                                           
Query: 498   cacctggtggtagtaggaagcagccagggtgtttcccttgttgttc 543
             ||||| |||||||||||||||||| ||| ||| |||||||||||||
Sbjct: 32039 caccttgtggtagtaggaagcagcaaggctgtctcccttgttgttc 31994
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>gb|AC124836.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0092E21, complete sequence
          Length = 132649

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 53/61 (86%)
 Strand = Plus / Plus

                                                                         
Query: 589   gcattgtacttggtgaagtccccagaggcagtatcaaatgcaacatcaagaccaaaagca 648
             |||||||||||||||||||  |||   |||||||||||||||||||||  ||||| ||||
Sbjct: 59646 gcattgtacttggtgaagtttccactcgcagtatcaaatgcaacatcagtaccaacagca 59705

              
Query: 649   a 649
             |
Sbjct: 59706 a 59706
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>gb|BT016491.1| Zea mays clone Contig324 mRNA sequence
          Length = 1330

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                       
Query: 585 tccagcattgtacttggtgaagtccccagaggcagtatcaaatg 628
           |||||||||||| |||||||||| ||||| ||||| ||||||||
Sbjct: 635 tccagcattgtatttggtgaagttcccagtggcagaatcaaatg 592
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>gb|AY316739.1| Lotus corniculatus var. japonicus VDAC1.3 mRNA, complete cds
          Length = 1069

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                   
Query: 589 gcattgtacttggtgaagtccccagaggcagtatcaaatg 628
           |||||||||||||| ||||  |||||||||||||||||||
Sbjct: 507 gcattgtacttggtaaagttgccagaggcagtatcaaatg 468
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>gb|AF178951.1|AF178951 Zea mays voltage-dependent anion channel protein 1b (vdac1b) mRNA,
           complete cds; nuclear gene for mitochondrial product
          Length = 1175

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                       
Query: 585 tccagcattgtacttggtgaagtccccagaggcagtatcaaatg 628
           |||||||||||| |||||||||| ||||| ||||| ||||||||
Sbjct: 630 tccagcattgtatttggtgaagttcccagtggcagaatcaaatg 587
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>gb|AC165163.2| Mus musculus BAC clone RP23-146B12 from chromosome 14, complete
             sequence
          Length = 178254

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                        
Query: 623   caaatgcaacatcaagaccaaaagcaa 649
             |||||||||||||||||||||||||||
Sbjct: 11596 caaatgcaacatcaagaccaaaagcaa 11570
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>gb|AC167566.1| Mus musculus BAC clone RP24-84B10 from chromosome 14, complete sequence
          Length = 187792

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                        
Query: 623   caaatgcaacatcaagaccaaaagcaa 649
             |||||||||||||||||||||||||||
Sbjct: 13837 caaatgcaacatcaagaccaaaagcaa 13863
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>ref|XM_450604.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1124

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 432 ggtgatggtgttctcgttgctcgagaagctgtg 464
           ||||| || ||||||||||||||||||||||||
Sbjct: 725 ggtgagggagttctcgttgctcgagaagctgtg 693
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>gb|BT012680.1| Lycopersicon esculentum clone 113526R, mRNA sequence
          Length = 1095

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 43/49 (87%)
 Strand = Plus / Minus

                                                            
Query: 417 gtgctgcgtccccacggtgatggtgttctcgttgctcgagaagctgtga 465
           |||||| || |||||||||||| ||||||| ||| | ||||||||||||
Sbjct: 706 gtgctgagtacccacggtgatgatgttctcattggtagagaagctgtga 658
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                                 
Query: 432      ggtgatggtgttctcgttgctcgagaagctgtg 464
                ||||| || ||||||||||||||||||||||||
Sbjct: 11754767 ggtgagggagttctcgttgctcgagaagctgtg 11754735
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>dbj|AP005508.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0711F01
          Length = 193091

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                               
Query: 432    ggtgatggtgttctcgttgctcgagaagctgtg 464
              ||||| || ||||||||||||||||||||||||
Sbjct: 189401 ggtgagggagttctcgttgctcgagaagctgtg 189369
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>emb|Y18104.1|OSA18104 Oryza sativa mRNA for voltage-dependent anion channel
          Length = 1093

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 432 ggtgatggtgttctcgttgctcgagaagctgtg 464
           ||||| || ||||||||||||||||||||||||
Sbjct: 662 ggtgagggagttctcgttgctcgagaagctgtg 630
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>dbj|AK072129.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013126C04, full
            insert sequence
          Length = 3071

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                             
Query: 432  ggtgatggtgttctcgttgctcgagaagctgtg 464
            ||||| || ||||||||||||||||||||||||
Sbjct: 2672 ggtgagggagttctcgttgctcgagaagctgtg 2640
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>dbj|AK061261.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-C01, full
           insert sequence
          Length = 1125

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 432 ggtgatggtgttctcgttgctcgagaagctgtg 464
           ||||| || ||||||||||||||||||||||||
Sbjct: 725 ggtgagggagttctcgttgctcgagaagctgtg 693
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>dbj|AK060652.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-H05, full
           insert sequence
          Length = 1242

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                            
Query: 432 ggtgatggtgttctcgttgctcgagaagctgtg 464
           ||||| || ||||||||||||||||||||||||
Sbjct: 739 ggtgagggagttctcgttgctcgagaagctgtg 707
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>gb|AY316737.1| Lotus corniculatus var. japonicus VDAC1.1 mRNA, complete cds
          Length = 1203

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                      
Query: 339 ccacgcgtgctggatgagcgcacttgcgatgccaaagttgttg 381
           |||| ||||||||||||| ||||||||  |||| |||||||||
Sbjct: 814 ccactcgtgctggatgagagcacttgccttgccgaagttgttg 772
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>emb|X74799.1|PAAS4EF P.anserina AS4 gene for translation elongation factor EF-1-alpha
          Length = 2157

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 270  gaacttggggctcttctcaacggcctt 296
            |||||||||||||| ||||||||||||
Sbjct: 1898 gaacttggggctctcctcaacggcctt 1872
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>dbj|AP006116.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT40C04, TM0199,
              complete sequence
          Length = 123325

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                         
Query: 339    ccacgcgtgctggatgagcgcacttgcgatgccaaagttgttg 381
              |||| ||||||||||||| ||||||||  |||| |||||||||
Sbjct: 119547 ccactcgtgctggatgagagcacttgccttgccgaagttgttg 119589
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>dbj|AP004901.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT13M13, TM0051b,
            complete sequence
          Length = 54022

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 38/43 (88%)
 Strand = Plus / Minus

                                                       
Query: 339  ccacgcgtgctggatgagcgcacttgcgatgccaaagttgttg 381
            |||| ||||||||||||| ||||||||  |||| |||||||||
Sbjct: 8671 ccactcgtgctggatgagagcacttgccttgccgaagttgttg 8629
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>gb|AC145450.4| Mus musculus strain C57BL/6J clone rp23-430i3, complete sequence
          Length = 208207

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 567  ttggttagtatggctcattccagcat 592
            ||||||||||||| ||||||||||||
Sbjct: 5580 ttggttagtatggatcattccagcat 5605
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>emb|X77733.1|TAVDAC1 T.aestivum VDAC 1 mRNA
          Length = 1159

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                     
Query: 504 gtggtagtaggaagcagccagggtgtttcccttgttgttcag 545
           |||||| ||||| |||| |||| ||| |||||||||||||||
Sbjct: 615 gtggtaataggatgcagtcaggctgtctcccttgttgttcag 574



 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 440 tgttctcgttgctcgagaagctgtg 464
           ||||||||||||| |||||||||||
Sbjct: 682 tgttctcgttgcttgagaagctgtg 658
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>emb|AL732585.8| Mouse DNA sequence from clone RP23-226M2 on chromosome 2, complete
             sequence
          Length = 151891

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 567   ttggttagtatggctcattccagcat 592
             ||||||||||||| ||||||||||||
Sbjct: 91138 ttggttagtatggatcattccagcat 91163
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>ref|NM_192554.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 828

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 48/57 (84%)
 Strand = Plus / Minus

                                                                    
Query: 587 cagcattgtacttggtgaagtccccagaggcagtatcaaatgcaacatcaagaccaa 643
           ||||||||||||||||||| |  | ||  ||||| || ||||||||||||| |||||
Sbjct: 478 cagcattgtacttggtgaaattgctagtcgcagtgtcgaatgcaacatcaacaccaa 422
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>ref|XM_418162.1| PREDICTED: Gallus gallus similar to type I hair keratin KA31
           (LOC420039), mRNA
          Length = 2583

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 291 ggccttggtatcaacctcggtggag 315
           ||||||||||||| |||||||||||
Sbjct: 226 ggccttggtatcagcctcggtggag 250
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>gb|AC147648.4| Homo sapiens BAC clone RP11-1413M17 from UL, complete sequence
          Length = 188992

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 620   tatcaaatgcaacatcaagac 640
             |||||||||||||||||||||
Sbjct: 61801 tatcaaatgcaacatcaagac 61781
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>gb|BT014102.1| Lycopersicon esculentum clone 133206R, mRNA sequence
          Length = 1133

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                            
Query: 418 tgctgcgtccccacggtgatggtgttctcgttgctcgagaagctgtgag 466
           ||||| ||||| | |||||  |||||||| ||||| |||||||||||||
Sbjct: 731 tgctgtgtcccaatggtgagtgtgttctcattgcttgagaagctgtgag 683
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>gb|AC145613.2| Homo sapiens BAC clone RP11-1266H24 from UL, complete sequence
          Length = 178925

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 620   tatcaaatgcaacatcaagac 640
             |||||||||||||||||||||
Sbjct: 38615 tatcaaatgcaacatcaagac 38595
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>gb|AC158763.6| Mus musculus chromosome 18, clone RP23-343L17, complete sequence
          Length = 204022

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 629   caacatcaagaccaaaagcaa 649
             |||||||||||||||||||||
Sbjct: 16931 caacatcaagaccaaaagcaa 16911
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>emb|X80387.1|STPORIN2 S.tuberosum pPOM36II mRNA for 36kDa porinII
          Length = 1060

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                            
Query: 418 tgctgcgtccccacggtgatggtgttctcgttgctcgagaagctgtgag 466
           ||||| ||||| | |||||  |||||||| ||||| |||||||||||||
Sbjct: 699 tgctgtgtcccaatggtgagtgtgttctcattgcttgagaagctgtgag 651
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>emb|X80386.1|STPORIN1 S.tuberosum pPOM34 mRNA for mitochondrial 34kDa porin
          Length = 1210

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                            
Query: 417 gtgctgcgtccccacggtgatggtgttctcgttgctcgagaagctgtga 465
           |||||| || |||||||| ||| ||||||| ||| | ||||||||||||
Sbjct: 707 gtgctgagtacccacggtaatgatgttctcattggtggagaagctgtga 659
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>dbj|AP003300.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0700A11
          Length = 136321

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 48/57 (84%)
 Strand = Plus / Plus

                                                                       
Query: 587    cagcattgtacttggtgaagtccccagaggcagtatcaaatgcaacatcaagaccaa 643
              ||||||||||||||||||| |  | ||  ||||| || ||||||||||||| |||||
Sbjct: 108732 cagcattgtacttggtgaaattgctagtcgcagtgtcgaatgcaacatcaacaccaa 108788
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>gb|AC025226.4|AC025226 Homo sapiens BAC clone RP11-57J19 from Y, complete sequence
          Length = 168066

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 620    tatcaaatgcaacatcaagac 640
              |||||||||||||||||||||
Sbjct: 105067 tatcaaatgcaacatcaagac 105087
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>emb|AJ251563.1|OSA251563 Oryza sativa mRNA for voltage-dependent anion channel (VDAC3 gene)
          Length = 1148

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 48/57 (84%)
 Strand = Plus / Minus

                                                                    
Query: 587 cagcattgtacttggtgaagtccccagaggcagtatcaaatgcaacatcaagaccaa 643
           ||||||||||||||||||| |  | ||  ||||| || ||||||||||||| |||||
Sbjct: 551 cagcattgtacttggtgaaattgctagtcgcagtgtcgaatgcaacatcaacaccaa 495
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>dbj|AK104419.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-B06, full
           insert sequence
          Length = 1151

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 48/57 (84%)
 Strand = Plus / Minus

                                                                    
Query: 587 cagcattgtacttggtgaagtccccagaggcagtatcaaatgcaacatcaagaccaa 643
           ||||||||||||||||||| |  | ||  ||||| || ||||||||||||| |||||
Sbjct: 556 cagcattgtacttggtgaaattgctagtcgcagtgtcgaatgcaacatcaacaccaa 500
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>dbj|AK104055.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B09, full
           insert sequence
          Length = 1160

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 48/57 (84%)
 Strand = Plus / Minus

                                                                    
Query: 587 cagcattgtacttggtgaagtccccagaggcagtatcaaatgcaacatcaagaccaa 643
           ||||||||||||||||||| |  | ||  ||||| || ||||||||||||| |||||
Sbjct: 567 cagcattgtacttggtgaaattgctagtcgcagtgtcgaatgcaacatcaacaccaa 511
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>dbj|AK070745.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023068C08, full
           insert sequence
          Length = 1216

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 48/57 (84%)
 Strand = Plus / Minus

                                                                    
Query: 587 cagcattgtacttggtgaagtccccagaggcagtatcaaatgcaacatcaagaccaa 643
           ||||||||||||||||||| |  | ||  ||||| || ||||||||||||| |||||
Sbjct: 611 cagcattgtacttggtgaaattgctagtcgcagtgtcgaatgcaacatcaacaccaa 555
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>gb|AC183761.3| Pan troglodytes BAC clone CH251-710C5 from chromosome 7, complete
              sequence
          Length = 205916

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 208    aatgctagcatcctaatgca 227
              ||||||||||||||||||||
Sbjct: 191956 aatgctagcatcctaatgca 191975
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>gb|AC110177.19| Mus musculus chromosome 1, clone RP24-245K23, complete sequence
          Length = 165052

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 630   aacatcaagaccaaaagcaa 649
             ||||||||||||||||||||
Sbjct: 67935 aacatcaagaccaaaagcaa 67954
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>gb|AC122234.4| Mus musculus BAC clone RP23-138M13 from chromosome 1, complete sequence
          Length = 175090

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 630   aacatcaagaccaaaagcaa 649
             ||||||||||||||||||||
Sbjct: 37750 aacatcaagaccaaaagcaa 37731
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>gb|CP000051.1| Chlamydia trachomatis A/HAR-13, complete genome
          Length = 1044459

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 433    gtgatggtgttctcgttgctcgag 456
              |||||||||| |||||||||||||
Sbjct: 742998 gtgatggtgtcctcgttgctcgag 742975
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>gb|AC122855.4| Mus musculus BAC clone RP23-120H20 from chromosome 14, complete
             sequence
          Length = 202424

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 471   ctctgctcccacagcagtgg 490
             ||||||||||||||||||||
Sbjct: 36917 ctctgctcccacagcagtgg 36936
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>gb|AY445665.1| Photorhabdus luminescens putative toxin transporter (mtpB) gene,
            partial cds; and putative toxin transporter (mtpD),
            putative toxin transporter (mtpE), and Mcf2 (mcf2) genes,
            complete cds
          Length = 13732

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 305  cctcggtggagaaggtgatgacag 328
            ||||| ||||||||||||||||||
Sbjct: 1468 cctcgctggagaaggtgatgacag 1491
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>gb|AC125172.4| Mus musculus BAC clone RP24-492I4 from chromosome 14, complete sequence
          Length = 179789

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 471   ctctgctcccacagcagtgg 490
             ||||||||||||||||||||
Sbjct: 25947 ctctgctcccacagcagtgg 25928
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>gb|AC092637.2| Homo sapiens BAC clone RP11-358M3 from 7, complete sequence
          Length = 126643

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 208   aatgctagcatcctaatgca 227
             ||||||||||||||||||||
Sbjct: 88845 aatgctagcatcctaatgca 88826
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>gb|AC153894.8| Mus musculus 6 BAC RP23-118E20 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 216116

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 630    aacatcaagaccaaaagcaa 649
              ||||||||||||||||||||
Sbjct: 111692 aacatcaagaccaaaagcaa 111711
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>emb|AJ616216.2| Takifugu rubripes ifng gene for interferon gamma, exons 1-4
          Length = 3030

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 196  tgatggtaccaaaatgctagcatcctaa 223
            |||||||||||| |||||||||| ||||
Sbjct: 1679 tgatggtaccaacatgctagcatgctaa 1706
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>emb|X80388.1|STPORIN3 S.tuberosum pPOM36I mRNA for 36kDA porinI
          Length = 1030

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 439 gtgttctcgttgctcgagaagctgtgag 466
           |||||||| ||||| |||||||||||||
Sbjct: 638 gtgttctcattgcttgagaagctgtgag 611
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>dbj|AK159001.1| Mus musculus visual cortex cDNA, RIKEN full-length enriched library,
            clone:K530026P09 product:unclassifiable, full insert
            sequence
          Length = 3767

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 630  aacatcaagaccaaaagcaa 649
            ||||||||||||||||||||
Sbjct: 2866 aacatcaagaccaaaagcaa 2847
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>gb|AE001273.1| Chlamydia trachomatis D/UW-3/CX, complete genome
          Length = 1042519

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 433    gtgatggtgttctcgttgctcgag 456
              |||||||||| |||||||||||||
Sbjct: 740272 gtgatggtgtcctcgttgctcgag 740249
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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 341     acgcgtgctggatgagcgca 360
               ||||||||||||||||||||
Sbjct: 4144682 acgcgtgctggatgagcgca 4144701
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>gb|AC154461.2| Mus musculus BAC clone RP24-163I13 from 14, complete sequence
          Length = 202273

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 471   ctctgctcccacagcagtgg 490
             ||||||||||||||||||||
Sbjct: 12685 ctctgctcccacagcagtgg 12704
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>gb|AY106124.1| Zea mays PCO123686 mRNA sequence
          Length = 926

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 504 gtggtagtaggaagcagccagggt 527
           |||||||||||| |||||||||||
Sbjct: 692 gtggtagtaggacgcagccagggt 669
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>emb|CT025626.11| Mouse DNA sequence from clone RP24-141G14 on chromosome 14, complete
              sequence
          Length = 201441

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 471    ctctgctcccacagcagtgg 490
              ||||||||||||||||||||
Sbjct: 181837 ctctgctcccacagcagtgg 181856
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>gb|AC154013.4| Mus musculus 6 BAC RP24-124B23 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 151057

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 630    aacatcaagaccaaaagcaa 649
              ||||||||||||||||||||
Sbjct: 135145 aacatcaagaccaaaagcaa 135164
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>gb|AC154176.5| Mus musculus BAC clone RP23-463F22 from chromosome 13, complete sequence
          Length = 193103

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 630    aacatcaagaccaaaagcaa 649
              ||||||||||||||||||||
Sbjct: 120336 aacatcaagaccaaaagcaa 120317
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>gb|AC129184.3| Mus musculus BAC clone RP23-358F24 from 5, complete sequence
          Length = 203369

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 630   aacatcaagaccaaaagcaa 649
             ||||||||||||||||||||
Sbjct: 54974 aacatcaagaccaaaagcaa 54955


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,406,626
Number of Sequences: 3902068
Number of extensions: 4406626
Number of successful extensions: 76417
Number of sequences better than 10.0: 69
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 76146
Number of HSP's gapped (non-prelim): 259
length of query: 651
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 628
effective length of database: 17,143,297,704
effective search space: 10765990958112
effective search space used: 10765990958112
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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