| Clone Name | rbags11p24 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|D88272.1| Hordeum vulgare mRNA for formate dehydrogenase, complete cds Length = 1380 Score = 961 bits (485), Expect = 0.0 Identities = 514/521 (98%), Gaps = 2/521 (0%) Strand = Plus / Minus Query: 42 tcagataacctcgtcccagagctttttattcactgccatggttgcacccccaggcagaca 101 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1377 tcagataacctcgtcccagagctttttattcgctgccatggttgcacccccaggcagaca 1318 Query: 102 tccattatttccgttctcagagaacgctcatacaacaacacaatggtttcttctctcacg 161 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1317 tccattatttccgttctcagagaacgctcatacaacaacacaatggtttcttctctcacg 1258 Query: 162 cctcgcttcagagttcaaatatgttaccatgcagcgtcggaggggttgggttactacttg 221 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1257 cctcgcttcatagttcaaatatgttaccatgcagcgtcggaggggttgggttactacttg 1198 Query: 222 tactggctggcgagctcgccttccttgacgatgtagttctccacggggaactcctcgccc 281 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1197 tactggctggcgagctcgccttccttgacgatgtagttctccacggggaactcctcgccc 1138 Query: 282 ttgaagtacctatccaacatgtccttcactccagccgcgtacctcagctgtgcatcaatt 341 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1137 ttgaagtacctatccaacatgtccttcactccagccgcgtacctcagctgtgcatcaatt 1078 Query: 342 gtagtcccagagatgtgaggggtatttgcgtgattaggcatgtagcgccatgggtgatcc 401 ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 1077 gtagtcccagaaatgtgaggggtcattgcgtgattaggcatgtagcgccatgggtgatcc 1018 Query: 402 ttgggtgcgggttgggggaaccagacatcacctccgtatccagcaatgtgaccgctggag 461 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1017 ttgggtgcgggttgggggaaccagacatcacctccgtatccagcaatgtgaccgctggag 958 Query: 462 caagcatcagcaacagccctgggtatccatgattgcgccccggagcgttattcacaatga 521 |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| Sbjct: 957 caagcatcagcaacag-cctgggtatccatgattgcgcccc-gagcgttattcacaatga 900 Query: 522 ttacacctttcttcatcttcgcaatcttttctttgttgaac 562 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 899 ttacacctttcttcatcttcgcaatcttttctttgttgaac 859
>dbj|AK104788.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-E04, full insert sequence Length = 1637 Score = 339 bits (171), Expect = 6e-90 Identities = 305/347 (87%), Gaps = 2/347 (0%) Strand = Plus / Minus Query: 209 gggttactacttgtactggctggcgagctcgccttccttgacgatgtagttctccacggg 268 |||||| |||| ||||||||| ||||||| |||||||||||||||||||||| ||| || Sbjct: 1222 gggttattactggtactggctcgcgagctgaccttccttgacgatgtagttctgcaccgg 1163 Query: 269 gaactcctcgcccttgaagtacctatccaacatgtccttcactccagccgcgtacctcag 328 ||| || || || ||||||||||| |||| ||||||||||||||| || ||||| ||||| Sbjct: 1162 gaagtcttcccctttgaagtacctgtccagcatgtccttcactcctgctgcgtatctcag 1103 Query: 329 ctgtgcatcaattgtagtcccagagatgtgaggggtatttgcgtgattaggcatgtagcg 388 ||||||||||||||||||||||||||| |||||||| | || |||||||||||||| || Sbjct: 1102 ctgtgcatcaattgtagtcccagagatatgaggggtcatggcatgattaggcatgtatcg 1043 Query: 389 ccatgggtgatccttgggtgcgggttgggggaaccagacatcacctccgtatccagcaat 448 ||||||||||||||| ||||| ||||||||||||||||||||||| || ||||| |||| Sbjct: 1042 ccatgggtgatcctttggtgctggttgggggaaccagacatcaccaccatatcctgcaac 983 Query: 449 gtgaccgctggagcaagcatcagcaacagccctgggtatccatgattgcgccccggagcg 508 ||||| || |||||||| || ||||| | ||||||||||||||||||| || | |||| Sbjct: 982 ttgaccactagagcaagcgtctgcaaccg-cctgggtatccatgattgctcctc-gagca 925 Query: 509 ttattcacaatgattacacctttcttcatcttcgcaatcttttcttt 555 |||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 924 ttattcacaatgattacacctttcttcatctttgcaattctttcttt 878
>dbj|AK065872.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013048A01, full insert sequence Length = 1648 Score = 339 bits (171), Expect = 6e-90 Identities = 305/347 (87%), Gaps = 2/347 (0%) Strand = Plus / Minus Query: 209 gggttactacttgtactggctggcgagctcgccttccttgacgatgtagttctccacggg 268 |||||| |||| ||||||||| ||||||| |||||||||||||||||||||| ||| || Sbjct: 1233 gggttattactggtactggctcgcgagctgaccttccttgacgatgtagttctgcaccgg 1174 Query: 269 gaactcctcgcccttgaagtacctatccaacatgtccttcactccagccgcgtacctcag 328 ||| || || || ||||||||||| |||| ||||||||||||||| || ||||| ||||| Sbjct: 1173 gaagtcttcccctttgaagtacctgtccagcatgtccttcactcctgctgcgtatctcag 1114 Query: 329 ctgtgcatcaattgtagtcccagagatgtgaggggtatttgcgtgattaggcatgtagcg 388 ||||||||||||||||||||||||||| |||||||| | || |||||||||||||| || Sbjct: 1113 ctgtgcatcaattgtagtcccagagatatgaggggtcatggcatgattaggcatgtatcg 1054 Query: 389 ccatgggtgatccttgggtgcgggttgggggaaccagacatcacctccgtatccagcaat 448 ||||||||||||||| ||||| ||||||||||||||||||||||| || ||||| |||| Sbjct: 1053 ccatgggtgatcctttggtgctggttgggggaaccagacatcaccaccatatcctgcaac 994 Query: 449 gtgaccgctggagcaagcatcagcaacagccctgggtatccatgattgcgccccggagcg 508 ||||| || |||||||| || ||||| | ||||||||||||||||||| || | |||| Sbjct: 993 ttgaccactagagcaagcgtctgcaaccg-cctgggtatccatgattgctcctc-gagca 936 Query: 509 ttattcacaatgattacacctttcttcatcttcgcaatcttttcttt 555 |||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 935 ttattcacaatgattacacctttcttcatctttgcaattctttcttt 889
>dbj|AB019533.1| Oryza sativa mRNA for Nad-dependent formate dehydrogenase, complete cds Length = 1449 Score = 291 bits (147), Expect = 1e-75 Identities = 299/347 (86%), Gaps = 2/347 (0%) Strand = Plus / Minus Query: 209 gggttactacttgtactggctggcgagctcgccttccttgacgatgtagttctccacggg 268 |||||| |||| ||||||||| ||||||| |||||||||||||||||||||| ||| || Sbjct: 1236 gggttattactggtactggctcgcgagctgaccttccttgacgatgtagttctgcaccgg 1177 Query: 269 gaactcctcgcccttgaagtacctatccaacatgtccttcactccagccgcgtacctcag 328 ||| || || || ||||||||||| |||| ||||||||| ||||| || ||||| ||||| Sbjct: 1176 gaagtcttcccctttgaagtacctgtccagcatgtccttaactcctgctgcgtatctcag 1117 Query: 329 ctgtgcatcaattgtagtcccagagatgtgaggggtatttgcgtgattaggcatgtagcg 388 ||||||||||||||||||||||||||| |||||||| | || |||||||||||||| || Sbjct: 1116 ctgtgcatcaattgtagtcccagagatatgaggggtcatggcatgattaggcatgtaccg 1057 Query: 389 ccatgggtgatccttgggtgcgggttgggggaaccagacatcacctccgtatccagcaat 448 ||| || || |||| ||||| ||||||||||||||||||||||| || || || |||| Sbjct: 1056 ccagggtggaccctttggtgctggttgggggaaccagacatcaccaccatagcctgcaac 997 Query: 449 gtgaccgctggagcaagcatcagcaacagccctgggtatccatgattgcgccccggagcg 508 ||||| || |||||||| || ||||| | ||||||||||||||||||| || | |||| Sbjct: 996 ttgaccactagagcaagcgtctgcaaccg-cctgggtatccatgattgctcctc-gagca 939 Query: 509 ttattcacaatgattacacctttcttcatcttcgcaatcttttcttt 555 |||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 938 ttattcacaatgattacacctttcttcatctttgcaattctttcttt 892
>gb|BT016309.1| Zea mays clone Contig142 mRNA sequence Length = 1507 Score = 289 bits (146), Expect = 5e-75 Identities = 292/338 (86%), Gaps = 2/338 (0%) Strand = Plus / Minus Query: 221 gtactggctggcgagctcgccttccttgacgatgtagttctccacggggaactcctcgcc 280 |||||| ||||| |||| ||||||||||||||||||||||| ||||||||| |||||||| Sbjct: 1223 gtactgactggcaagctggccttccttgacgatgtagttctgcacggggaagtcctcgcc 1164 Query: 281 cttgaagtacctatccaacatgtccttcactccagccgcgtacctcagctgtgcatcaat 340 |||||| ||||||| || ||||||| |||| ||| |||| |||| |||||| |||||||| Sbjct: 1163 cttgaaatacctattcagcatgtccctcacaccatccgcataccgcagctgcgcatcaat 1104 Query: 341 tgtagtcccagagatgtgaggggtatttgcgtgattaggcatgtagcgccatgggtgatc 400 |||||||||||||||||||||||| | || || || |||||||||||||| |||||||| Sbjct: 1103 tgtagtcccagagatgtgaggggtcatggcatggtttggcatgtagcgccaggggtgatc 1044 Query: 401 cttgggtgcgggttgggggaaccagacatcacctccgtatccagcaatgtgaccgctgga 460 ||| ||||| || || |||||||| |||||||| ||||||||||||||||||||||| || Sbjct: 1043 ctttggtgctggctgtgggaaccacacatcaccaccgtatccagcaatgtgaccgctaga 984 Query: 461 gcaagcatcagcaacagccctgggtatccatgattgcgccccggagcgttattcacaatg 520 || ||||| || || | | || | |||||||||||| || | |||| |||||||||| Sbjct: 983 acatgcatctgcgactg-cttgagcatccatgattgctcctc-gagcattattcacaaca 926 Query: 521 attacacctttcttcatcttcgcaatcttttctttgtt 558 |||||||||||||||||||| |||||| | |||||||| Sbjct: 925 attacacctttcttcatctttgcaatcctctctttgtt 888
>dbj|AK064610.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-113-B06, full insert sequence Length = 1872 Score = 287 bits (145), Expect = 2e-74 Identities = 291/337 (86%), Gaps = 2/337 (0%) Strand = Plus / Minus Query: 222 tactggctggcgagctcgccttccttgacgatgtagttctccacggggaactcctcgccc 281 |||||||||||||||| |||| |||||||||||||||||| | | ||||| ||||| || Sbjct: 1678 tactggctggcgagctggcctgccttgacgatgtagttctgcgccgggaagtcctcccct 1619 Query: 282 ttgaagtacctatccaacatgtccttcactccagccgcgtacctcagctgtgcatcaatt 341 ||||| ||||| |||| ||||||||| || || |||||||| ||||||||| |||||||| Sbjct: 1618 ttgaaatacctgtccagcatgtcctttacccccgccgcgtatctcagctgtccatcaatt 1559 Query: 342 gtagtcccagagatgtgaggggtatttgcgtgattaggcatgtagcgccatgggtgatcc 401 |||||||||||| ||||||||| | |||||||| |||||||| ||||||||||||||| Sbjct: 1558 gtagtcccagagcagtgaggggtcatagcgtgattgggcatgtatcgccatgggtgatcc 1499 Query: 402 ttgggtgcgggttgggggaaccagacatcacctccgtatccagcaatgtgaccgctggag 461 || ||||| || |||||||||||||| ||||| || ||||| |||| |||||| |||| | Sbjct: 1498 tttggtgctggctgggggaaccagacgtcaccaccatatcctgcaacgtgaccactggcg 1439 Query: 462 caagcatcagcaacagccctgggtatccatgattgcgccccggagcgttattcacaatga 521 ||||| |||||||| | ||||||||||||||||||| || | |||| || ||||||||| Sbjct: 1438 caagcgtcagcaaccg-cctgggtatccatgattgctccac-gagcattgttcacaatgg 1381 Query: 522 ttacacctttcttcatcttcgcaatcttttctttgtt 558 | ||||||||||||||||| |||||| | |||||||| Sbjct: 1380 tcacacctttcttcatctttgcaatcctctctttgtt 1344
>gb|AY111955.1| Zea mays CL15209_1 mRNA sequence Length = 1667 Score = 278 bits (140), Expect = 2e-71 Identities = 277/320 (86%), Gaps = 2/320 (0%) Strand = Plus / Minus Query: 239 gccttccttgacgatgtagttctccacggggaactcctcgcccttgaagtacctatccaa 298 ||||||||||||||||||||||| ||| ||||| |||||||||||||| |||||||||| Sbjct: 1210 gccttccttgacgatgtagttctgcaccgggaagtcctcgcccttgaaatacctatccag 1151 Query: 299 catgtccttcactccagccgcgtacctcagctgtgcatcaattgtagtcccagagatgtg 358 ||||||| |||| ||| |||| |||| |||||| |||||||||||||||||||||||||| Sbjct: 1150 catgtccctcacaccatccgcataccgcagctgcgcatcaattgtagtcccagagatgtg 1091 Query: 359 aggggtatttgcgtgattaggcatgtagcgccatgggtgatccttgggtgcgggttgggg 418 |||||| | || || ||||||||||||||||| ||||||||||| ||||| || || || Sbjct: 1090 aggggtcatggcatggttaggcatgtagcgccaggggtgatcctttggtgctggctgtgg 1031 Query: 419 gaaccagacatcacctccgtatccagcaatgtgaccgctggagcaagcatcagcaacagc 478 |||||| |||||||| ||||||||||||||||||||||| || || ||||| || || | Sbjct: 1030 gaaccacacatcaccaccgtatccagcaatgtgaccgctagaacatgcatctgcgactg- 972 Query: 479 cctgggtatccatgattgcgccccggagcgttattcacaatgattacacctttcttcatc 538 | || | |||||||||||| || | |||| ||||| |||| |||||||||||||||||| Sbjct: 971 cttgagcatccatgattgctcctc-gagcattatttacaacaattacacctttcttcatc 913 Query: 539 ttcgcaatcttttctttgtt 558 || |||||| | |||||||| Sbjct: 912 tttgcaatcctctctttgtt 893
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 147 bits (74), Expect = 5e-32 Identities = 104/114 (91%) Strand = Plus / Minus Query: 329 ctgtgcatcaattgtagtcccagagatgtgaggggtatttgcgtgattaggcatgtagcg 388 ||||||||||||||||||||||||||| |||||||| | || |||||||||||||| || Sbjct: 16434100 ctgtgcatcaattgtagtcccagagatatgaggggtcatggcatgattaggcatgtatcg 16434041 Query: 389 ccatgggtgatccttgggtgcgggttgggggaaccagacatcacctccgtatcc 442 ||||||||||||||| ||||| ||||||||||||||||||||||| || ||||| Sbjct: 16434040 ccatgggtgatcctttggtgctggttgggggaaccagacatcaccaccatatcc 16433987 Score = 117 bits (59), Expect = 4e-23 Identities = 107/123 (86%) Strand = Plus / Minus Query: 209 gggttactacttgtactggctggcgagctcgccttccttgacgatgtagttctccacggg 268 |||||| |||| ||||||||| ||||||| |||||||||||||||||||||| ||| || Sbjct: 16434684 gggttattactggtactggctcgcgagctgaccttccttgacgatgtagttctgcaccgg 16434625 Query: 269 gaactcctcgcccttgaagtacctatccaacatgtccttcactccagccgcgtacctcag 328 ||| || || || ||||||||||| |||| ||||||||||||||| || ||||| ||||| Sbjct: 16434624 gaagtcttcccctttgaagtacctgtccagcatgtccttcactcctgctgcgtatctcag 16434565 Query: 329 ctg 331 ||| Sbjct: 16434564 ctg 16434562 Score = 107 bits (54), Expect = 4e-20 Identities = 99/114 (86%) Strand = Plus / Minus Query: 329 ctgtgcatcaattgtagtcccagagatgtgaggggtatttgcgtgattaggcatgtagcg 388 |||| |||||||||||||||||||| ||||||||| | || ||||| |||||||| || Sbjct: 16463964 ctgtccatcaattgtagtcccagagcagtgaggggtcatagcatgattgggcatgtatcg 16463905 Query: 389 ccatgggtgatccttgggtgcgggttgggggaaccagacatcacctccgtatcc 442 ||||||||||||||| ||||| || |||||||||||||| ||||| || ||||| Sbjct: 16463904 ccatgggtgatcctttggtgctggctgggggaaccagacgtcaccaccatatcc 16463851 Score = 99.6 bits (50), Expect = 1e-17 Identities = 104/122 (85%) Strand = Plus / Minus Query: 209 gggttactacttgtactggctggcgagctcgccttccttgacgatgtagttctccacggg 268 |||||| |||| |||||||||||||||| |||| |||||||||||||||||| | | || Sbjct: 16464698 gggttattactgatactggctggcgagctggcctgccttgacgatgtagttctgcgccgg 16464639 Query: 269 gaactcctcgcccttgaagtacctatccaacatgtccttcactccagccgcgtacctcag 328 ||| ||||| || ||||| ||||| |||| ||||||||| || || |||||||| ||||| Sbjct: 16464638 gaagtcctcccctttgaaatacctgtccagcatgtcctttacccccgccgcgtatctcag 16464579 Query: 329 ct 330 || Sbjct: 16464578 ct 16464577 Score = 91.7 bits (46), Expect = 2e-15 Identities = 93/106 (87%), Gaps = 2/106 (1%) Strand = Plus / Minus Query: 450 tgaccgctggagcaagcatcagcaacagccctgggtatccatgattgcgccccggagcgt 509 ||||| || |||||||| || ||||| ||| ||||||||||||||||| || || ||| | Sbjct: 16433535 tgaccactagagcaagcgtctgcaaccgcc-tgggtatccatgattgctcctcg-agcat 16433478 Query: 510 tattcacaatgattacacctttcttcatcttcgcaatcttttcttt 555 ||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 16433477 tattcacaatgattacacctttcttcatctttgcaattctttcttt 16433432 Score = 85.7 bits (43), Expect = 1e-13 Identities = 99/115 (86%), Gaps = 2/115 (1%) Strand = Plus / Minus Query: 444 gcaatgtgaccgctggagcaagcatcagcaacagccctgggtatccatgattgcgccccg 503 |||| |||||| |||| |||||| |||||||| ||| ||||||||||||||||| || || Sbjct: 16463531 gcaacgtgaccactggcgcaagcgtcagcaaccgcc-tgggtatccatgattgctccacg 16463473 Query: 504 gagcgttattcacaatgattacacctttcttcatcttcgcaatcttttctttgtt 558 ||| || ||||||||| | ||||||||||||||||| |||||| | |||||||| Sbjct: 16463472 -agcattgttcacaatggtcacacctttcttcatctttgcaatcctctctttgtt 16463419
>dbj|AP005656.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0404G03 Length = 135225 Score = 147 bits (74), Expect = 5e-32 Identities = 104/114 (91%) Strand = Plus / Minus Query: 329 ctgtgcatcaattgtagtcccagagatgtgaggggtatttgcgtgattaggcatgtagcg 388 ||||||||||||||||||||||||||| |||||||| | || |||||||||||||| || Sbjct: 43418 ctgtgcatcaattgtagtcccagagatatgaggggtcatggcatgattaggcatgtatcg 43359 Query: 389 ccatgggtgatccttgggtgcgggttgggggaaccagacatcacctccgtatcc 442 ||||||||||||||| ||||| ||||||||||||||||||||||| || ||||| Sbjct: 43358 ccatgggtgatcctttggtgctggttgggggaaccagacatcaccaccatatcc 43305 Score = 117 bits (59), Expect = 4e-23 Identities = 107/123 (86%) Strand = Plus / Minus Query: 209 gggttactacttgtactggctggcgagctcgccttccttgacgatgtagttctccacggg 268 |||||| |||| ||||||||| ||||||| |||||||||||||||||||||| ||| || Sbjct: 44002 gggttattactggtactggctcgcgagctgaccttccttgacgatgtagttctgcaccgg 43943 Query: 269 gaactcctcgcccttgaagtacctatccaacatgtccttcactccagccgcgtacctcag 328 ||| || || || ||||||||||| |||| ||||||||||||||| || ||||| ||||| Sbjct: 43942 gaagtcttcccctttgaagtacctgtccagcatgtccttcactcctgctgcgtatctcag 43883 Query: 329 ctg 331 ||| Sbjct: 43882 ctg 43880 Score = 107 bits (54), Expect = 4e-20 Identities = 99/114 (86%) Strand = Plus / Minus Query: 329 ctgtgcatcaattgtagtcccagagatgtgaggggtatttgcgtgattaggcatgtagcg 388 |||| |||||||||||||||||||| ||||||||| | || ||||| |||||||| || Sbjct: 73282 ctgtccatcaattgtagtcccagagcagtgaggggtcatagcatgattgggcatgtatcg 73223 Query: 389 ccatgggtgatccttgggtgcgggttgggggaaccagacatcacctccgtatcc 442 ||||||||||||||| ||||| || |||||||||||||| ||||| || ||||| Sbjct: 73222 ccatgggtgatcctttggtgctggctgggggaaccagacgtcaccaccatatcc 73169 Score = 99.6 bits (50), Expect = 1e-17 Identities = 104/122 (85%) Strand = Plus / Minus Query: 209 gggttactacttgtactggctggcgagctcgccttccttgacgatgtagttctccacggg 268 |||||| |||| |||||||||||||||| |||| |||||||||||||||||| | | || Sbjct: 74016 gggttattactgatactggctggcgagctggcctgccttgacgatgtagttctgcgccgg 73957 Query: 269 gaactcctcgcccttgaagtacctatccaacatgtccttcactccagccgcgtacctcag 328 ||| ||||| || ||||| ||||| |||| ||||||||| || || |||||||| ||||| Sbjct: 73956 gaagtcctcccctttgaaatacctgtccagcatgtcctttacccccgccgcgtatctcag 73897 Query: 329 ct 330 || Sbjct: 73896 ct 73895 Score = 91.7 bits (46), Expect = 2e-15 Identities = 93/106 (87%), Gaps = 2/106 (1%) Strand = Plus / Minus Query: 450 tgaccgctggagcaagcatcagcaacagccctgggtatccatgattgcgccccggagcgt 509 ||||| || |||||||| || ||||| ||| ||||||||||||||||| || || ||| | Sbjct: 42853 tgaccactagagcaagcgtctgcaaccgcc-tgggtatccatgattgctcctcg-agcat 42796 Query: 510 tattcacaatgattacacctttcttcatcttcgcaatcttttcttt 555 ||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 42795 tattcacaatgattacacctttcttcatctttgcaattctttcttt 42750 Score = 85.7 bits (43), Expect = 1e-13 Identities = 99/115 (86%), Gaps = 2/115 (1%) Strand = Plus / Minus Query: 444 gcaatgtgaccgctggagcaagcatcagcaacagccctgggtatccatgattgcgccccg 503 |||| |||||| |||| |||||| |||||||| ||| ||||||||||||||||| || || Sbjct: 72849 gcaacgtgaccactggcgcaagcgtcagcaaccgcc-tgggtatccatgattgctccacg 72791 Query: 504 gagcgttattcacaatgattacacctttcttcatcttcgcaatcttttctttgtt 558 ||| || ||||||||| | ||||||||||||||||| |||||| | |||||||| Sbjct: 72790 -agcattgttcacaatggtcacacctttcttcatctttgcaatcctctctttgtt 72737
>dbj|AP003518.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0008F02 Length = 139655 Score = 147 bits (74), Expect = 5e-32 Identities = 104/114 (91%) Strand = Plus / Minus Query: 329 ctgtgcatcaattgtagtcccagagatgtgaggggtatttgcgtgattaggcatgtagcg 388 ||||||||||||||||||||||||||| |||||||| | || |||||||||||||| || Sbjct: 110663 ctgtgcatcaattgtagtcccagagatatgaggggtcatggcatgattaggcatgtatcg 110604 Query: 389 ccatgggtgatccttgggtgcgggttgggggaaccagacatcacctccgtatcc 442 ||||||||||||||| ||||| ||||||||||||||||||||||| || ||||| Sbjct: 110603 ccatgggtgatcctttggtgctggttgggggaaccagacatcaccaccatatcc 110550 Score = 117 bits (59), Expect = 4e-23 Identities = 107/123 (86%) Strand = Plus / Minus Query: 209 gggttactacttgtactggctggcgagctcgccttccttgacgatgtagttctccacggg 268 |||||| |||| ||||||||| ||||||| |||||||||||||||||||||| ||| || Sbjct: 111247 gggttattactggtactggctcgcgagctgaccttccttgacgatgtagttctgcaccgg 111188 Query: 269 gaactcctcgcccttgaagtacctatccaacatgtccttcactccagccgcgtacctcag 328 ||| || || || ||||||||||| |||| ||||||||||||||| || ||||| ||||| Sbjct: 111187 gaagtcttcccctttgaagtacctgtccagcatgtccttcactcctgctgcgtatctcag 111128 Query: 329 ctg 331 ||| Sbjct: 111127 ctg 111125 Score = 91.7 bits (46), Expect = 2e-15 Identities = 93/106 (87%), Gaps = 2/106 (1%) Strand = Plus / Minus Query: 450 tgaccgctggagcaagcatcagcaacagccctgggtatccatgattgcgccccggagcgt 509 ||||| || |||||||| || ||||| ||| ||||||||||||||||| || || ||| | Sbjct: 110098 tgaccactagagcaagcgtctgcaaccgcc-tgggtatccatgattgctcctcg-agcat 110041 Query: 510 tattcacaatgattacacctttcttcatcttcgcaatcttttcttt 555 ||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 110040 tattcacaatgattacacctttcttcatctttgcaattctttcttt 109995
>emb|Z21493.2|MISTFDHD Solanum tuberosum mRNA for formate dehydrogenase Length = 1262 Score = 129 bits (65), Expect = 1e-26 Identities = 173/209 (82%) Strand = Plus / Minus Query: 267 gggaactcctcgcccttgaagtacctatccaacatgtccttcactccagccgcgtacctc 326 ||||| ||||| |||||||||||||| |||||||| ||||| |||||| || |||||| Sbjct: 1099 gggaaatcctcacccttgaagtacctgtccaacatatcctttgttccagctgcatacctc 1040 Query: 327 agctgtgcatcaattgtagtcccagagatgtgaggggtatttgcgtgattaggcatgtag 386 | |||||||||||| ||||||||||| |||||||| || | || || || ||||||||| Sbjct: 1039 aactgtgcatcaatggtagtcccagaaatgtgaggagtcatagcttggtttggcatgtag 980 Query: 387 cgccatgggtgatccttgggtgcgggttgggggaaccagacatcacctccgtatccagca 446 ||||| || || |||||||| || ||||| ||| |||| ||||| || | |||||| ||| Sbjct: 979 cgccacggatggtccttgggagctggttgtgggtaccaaacatctccactgtatcctgca 920 Query: 447 atgtgaccgctggagcaagcatcagcaac 475 || ||||||||| ||||||||| |||| Sbjct: 919 atatgaccgctgttacaagcatcaacaac 891
>gb|AF439732.1|AF439732 Zea mays formate dehydrogenase mRNA, partial cds Length = 597 Score = 127 bits (64), Expect = 4e-26 Identities = 138/160 (86%), Gaps = 2/160 (1%) Strand = Plus / Minus Query: 399 tccttgggtgcgggttgggggaaccagacatcacctccgtatccagcaatgtgaccgctg 458 ||||||||||| |||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 596 tccttgggtgctggttgggggaaccacacatcaccaccgtatccagcaatgtgaccgcta 537 Query: 459 gagcaagcatcagcaacagccctgggtatccatgattgcgccccggagcgttattcacaa 518 || || ||||| || || | | || | |||||||||||| || | |||| |||||||||| Sbjct: 536 gaacatgcatctgcgactg-cttgagcatccatgattgctcctc-gagcattattcacaa 479 Query: 519 tgattacacctttcttcatcttcgcaatcttttctttgtt 558 |||||||||||||||||||| |||||| | |||||||| Sbjct: 478 caattacacctttcttcatctttgcaatcctctctttgtt 439
>emb|AJ849378.1| Lycopersicon esculentum mRNA for formate dehydrogenase (fdh gene) Length = 1572 Score = 121 bits (61), Expect = 3e-24 Identities = 172/209 (82%) Strand = Plus / Minus Query: 267 gggaactcctcgcccttgaagtacctatccaacatgtccttcactccagccgcgtacctc 326 ||||| ||||| |||||||||||||| |||||||| ||||| |||||| || |||||| Sbjct: 1243 gggaaatcctcacccttgaagtacctgtccaacatatcctttgttccagctgcatacctc 1184 Query: 327 agctgtgcatcaattgtagtcccagagatgtgaggggtatttgcgtgattaggcatgtag 386 | |||||||||||| ||||||||||| |||||||| || | || || || |||||||| Sbjct: 1183 aactgtgcatcaatggtagtcccagaaatgtgaggagtcatagcttggtttggcatgtaa 1124 Query: 387 cgccatgggtgatccttgggtgcgggttgggggaaccagacatcacctccgtatccagca 446 |||||| | || |||||||| || ||||| ||| |||| ||||| || | |||||| ||| Sbjct: 1123 cgccatagatggtccttgggagctggttgtgggtaccaaacatctccactgtatcctgca 1064 Query: 447 atgtgaccgctggagcaagcatcagcaac 475 || ||||||||| ||||||||| |||| Sbjct: 1063 atatgaccgctgttacaagcatcaacaac 1035
>emb|Z99992.1|STZ99992 Solanum tuberosum fdh1 gene encoding formate dehydrogenase Length = 4392 Score = 75.8 bits (38), Expect = 1e-10 Identities = 86/102 (84%) Strand = Plus / Minus Query: 329 ctgtgcatcaattgtagtcccagagatgtgaggggtatttgcgtgattaggcatgtagcg 388 |||||||||||| ||||||||||| |||||||| || | || || || ||||||||||| Sbjct: 4063 ctgtgcatcaatggtagtcccagaaatgtgaggagtcatagcttggtttggcatgtagcg 4004 Query: 389 ccatgggtgatccttgggtgcgggttgggggaaccagacatc 430 |||||| || |||||||| || ||||| ||| |||| ||||| Sbjct: 4003 ccatggatggtccttgggagctggttgtgggtaccaaacatc 3962 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Minus Query: 267 gggaactcctcgcccttgaagtacctatccaacatgtcctt 307 ||||| ||||| |||||||||||||| |||||||| ||||| Sbjct: 4237 gggaaatcctcacccttgaagtacctgtccaacatatcctt 4197
>emb|AJ577266.2|QRO577266 Quercus robur mRNA for formate dehydrogenase (ORF1) Length = 1513 Score = 69.9 bits (35), Expect = 9e-09 Identities = 119/147 (80%) Strand = Plus / Minus Query: 329 ctgtgcatcaattgtagtcccagagatgtgaggggtatttgcgtgattaggcatgtagcg 388 |||||||||||| || || ||||| || |||||||| | || || |||||||| || || Sbjct: 1121 ctgtgcatcaatggtggtaccagaaatatgaggggtcatagcatggttaggcatataacg 1062 Query: 389 ccatgggtgatccttgggtgcgggttgggggaaccagacatcacctccgtatccagcaat 448 ||||||||| ||||| || || ||||| |||||||| |||||||| | ||| || |||| Sbjct: 1061 ccatgggtggtcctttggagcaggttgtgggaaccaaacatcaccactgtaacctgcaac 1002 Query: 449 gtgaccgctggagcaagcatcagcaac 475 || || || || |||||||||||||| Sbjct: 1001 atggccactagaacaagcatcagcaac 975
>ref|XM_361560.1| Magnaporthe grisea 70-15 hypothetical protein (MG04034.4) partial mRNA Length = 1092 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 399 tccttgggtgcgggttgggggaaccagacatcacctccgtatcc 442 |||||||| ||||| |||||||||||||||||||| |||||||| Sbjct: 863 tccttgggggcgggctgggggaaccagacatcaccaccgtatcc 820
>ref|XM_659037.1| Aspergillus nidulans FGSC A4 formate dehydrogenase (AN6525.2), mRNA Length = 1134 Score = 63.9 bits (32), Expect = 5e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 392 tgggtgatccttgggtgcgggttgggggaaccagacatcacctccgta 439 |||||| |||||||| ||||| |||||||||||||||||||| ||||| Sbjct: 921 tgggtgctccttgggagcgggctgggggaaccagacatcaccgccgta 874
>emb|Z11612.1|ANACIAG A.nidulans aciA gene for AciA protein Length = 3042 Score = 63.9 bits (32), Expect = 5e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 392 tgggtgatccttgggtgcgggttgggggaaccagacatcacctccgta 439 |||||| |||||||| ||||| |||||||||||||||||||| ||||| Sbjct: 2282 tgggtgctccttgggagcgggctgggggaaccagacatcaccgccgta 2235
>dbj|AK109022.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-154-B02, full insert sequence Length = 1344 Score = 63.9 bits (32), Expect = 5e-07 Identities = 47/52 (90%) Strand = Plus / Minus Query: 392 tgggtgatccttgggtgcgggttgggggaaccagacatcacctccgtatcca 443 |||||| |||||||| ||||| |||||||||||||| ||||| ||||||||| Sbjct: 1033 tgggtggtccttgggcgcgggctgggggaaccagacgtcaccaccgtatcca 982
>gb|AY850352.1| Magnaporthe grisea formate dehydrogenase-like protein mRNA, complete cds Length = 1514 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 399 tccttgggtgcgggttgggggaaccagacatcacctccgtatcc 442 |||||||| ||||| |||||||||||||||||||| |||||||| Sbjct: 1244 tccttgggggcgggctgggggaaccagacatcaccaccgtatcc 1201
>ref|XM_505390.1| Yarrowia lipolytica CLIB122, YALI0F13937g predicted mRNA Length = 1107 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 399 tccttgggtgcgggttgggggaaccagacatcacctccgtatcc 442 |||||||| || || |||||||||||||||||||| |||||||| Sbjct: 869 tccttgggggcaggctgggggaaccagacatcaccaccgtatcc 826
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 399 tccttgggtgcgggttgggggaaccagacatcacctccgtatcc 442 |||||||| || || |||||||||||||||||||| |||||||| Sbjct: 1878134 tccttgggggcaggctgggggaaccagacatcaccaccgtatcc 1878177 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 414 tgggggaaccagacatcacctccgta 439 |||||||||||||| ||||||||||| Sbjct: 2152393 tgggggaaccagacgtcacctccgta 2152368
>emb|X81129.1|CMNADDFD C.methylica gene for NAD-dependent formate dehydrogenase Length = 1256 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 389 ccatgggtgatccttgggtgcgggttgggggaaccagacatcacctccgta 439 ||||||||||||||| || || ||||| |||||||| |||||||| ||||| Sbjct: 1010 ccatgggtgatcctttggagctggttgtgggaaccaaacatcaccaccgta 960
>emb|AJ245934.1|CBO245934 Candida boidinii fdh3 gene for NAD-dependent formate dehydrogenase Length = 1095 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 389 ccatgggtgatccttgggtgcgggttgggggaaccagacatcacctccgta 439 ||||||||||||||| || || ||||| |||||||| |||||||| ||||| Sbjct: 885 ccatgggtgatcctttggagctggttgtgggaaccaaacatcaccaccgta 835
>gb|AF004096.1|AF004096 Candida boidinii NAD-dependent formate dehydrogenase (FDH1) gene, complete cds Length = 1562 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 389 ccatgggtgatccttgggtgcgggttgggggaaccagacatcacctccgta 439 ||||||||||||||| || || ||||| |||||||| |||||||| ||||| Sbjct: 1074 ccatgggtgatcctttggagctggttgtgggaaccaaacatcaccaccgta 1024
>gb|AC149487.1| Solanum demissum chromosome 5 clone PGEC407 map MAP_LOC, complete sequence Length = 73587 Score = 52.0 bits (26), Expect = 0.002 Identities = 84/102 (82%), Gaps = 1/102 (0%) Strand = Plus / Plus Query: 329 ctgtgcatcaattgtagtcccagagatgtgaggggtatttgcgtgattaggcatgtagcg 388 |||||||||||| ||||||||||| |||||||| || | || || || ||||||||||| Sbjct: 61627 ctgtgcatcaatggtagtcccaga-atgtgaggagtcatagcttggtttggcatgtagcg 61685 Query: 389 ccatgggtgatccttgggtgcgggttgggggaaccagacatc 430 ||| | || |||||||| || ||||| ||| |||| ||||| Sbjct: 61686 ccacagatggtccttgggagctggttgtgggtaccaaacatc 61727 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 267 gggaactcctcgcccttgaagtacctatccaacat 301 ||||| ||||| |||||||||||||| |||||||| Sbjct: 61453 gggaaatcctcacccttgaagtacctgtccaacat 61487
>ref|XM_503998.1| Yarrowia lipolytica CLIB122, YALI0E15840g predicted mRNA Length = 1107 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 393 gggtgatccttgggtgcgggttgggggaaccagacatcacctccgtatcc 442 ||||| |||||||| || || |||||||||||||| || ||||||||||| Sbjct: 875 gggtggtccttgggggcaggctgggggaaccagacgtctcctccgtatcc 826
>emb|AJ004829.1|STAJ4829 Solanum tuberosum fdh3 pseudogene Length = 5868 Score = 52.0 bits (26), Expect = 0.002 Identities = 84/102 (82%), Gaps = 1/102 (0%) Strand = Plus / Minus Query: 329 ctgtgcatcaattgtagtcccagagatgtgaggggtatttgcgtgattaggcatgtagcg 388 |||||||||||| ||||||||||| |||||||| || | || || || ||||||||||| Sbjct: 4724 ctgtgcatcaatggtagtcccaga-atgtgaggagtcatagcttggtttggcatgtagcg 4666 Query: 389 ccatgggtgatccttgggtgcgggttgggggaaccagacatc 430 ||| | || |||||||| || ||||| ||| |||| ||||| Sbjct: 4665 ccacagatggtccttgggagctggttgtgggtaccaaacatc 4624 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Minus Query: 267 gggaactcctcgcccttgaagtacctatccaacatgtcctt 307 ||||| ||||| |||||||||||||| |||||||| ||||| Sbjct: 4898 gggaaatcctcacccttgaagtacctgtccaacatatcctt 4858
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 393 gggtgatccttgggtgcgggttgggggaaccagacatcacctccgtatcc 442 ||||| |||||||| || || |||||||||||||| || ||||||||||| Sbjct: 1892036 gggtggtccttgggggcaggctgggggaaccagacgtctcctccgtatcc 1891987 Score = 42.1 bits (21), Expect = 1.9 Identities = 51/61 (83%) Strand = Plus / Plus Query: 379 gcatgtagcgccatgggtgatccttgggtgcgggttgggggaaccagacatcacctccgt 438 ||||||| | ||| ||||| |||||||| || || |||||| |||||||||||| |||| Sbjct: 1713944 gcatgtatctccaggggtggtccttgggggcaggctgggggttccagacatcaccaccgt 1714003 Query: 439 a 439 | Sbjct: 1714004 a 1714004
>ref|NM_121482.2| Arabidopsis thaliana FDH (FORMATE DEHYDROGENASE); oxidoreductase, acting on the CH-OH group of donors, NAD or NADP as acceptor AT5G14780 (FDH) mRNA, complete cds Length = 1518 Score = 50.1 bits (25), Expect = 0.008 Identities = 127/161 (78%) Strand = Plus / Minus Query: 243 tccttgacgatgtagttctccacggggaactcctcgcccttgaagtacctatccaacatg 302 |||||||||||||| ||||| ||||| || || ||||||||||| || ||||||||| Sbjct: 1186 tccttgacgatgtaattctcagtagggaagtcttctcccttgaagtatctctccaacatg 1127 Query: 303 tccttcactccagccgcgtacctcagctgtgcatcaattgtagtcccagagatgtgaggg 362 || ||| || ||||| |||| ||||| || ||||| || || || ||| | |||||| Sbjct: 1126 tctttcgtccccgccgcataccgtagctgagcgtcaatggtggtgccggaggtatgaggg 1067 Query: 363 gtatttgcgtgattaggcatgtagcgccatgggtgatcctt 403 || | || || ||||||||||| |||||||| || ||||| Sbjct: 1066 gtcatagcctggttaggcatgtaacgccatggatggtcctt 1026
>gb|AY081734.1| Arabidopsis thaliana AT5g14780/T9L3_80 mRNA, complete cds Length = 1155 Score = 50.1 bits (25), Expect = 0.008 Identities = 127/161 (78%) Strand = Plus / Minus Query: 243 tccttgacgatgtagttctccacggggaactcctcgcccttgaagtacctatccaacatg 302 |||||||||||||| ||||| ||||| || || ||||||||||| || ||||||||| Sbjct: 1127 tccttgacgatgtaattctcagtagggaagtcttctcccttgaagtatctctccaacatg 1068 Query: 303 tccttcactccagccgcgtacctcagctgtgcatcaattgtagtcccagagatgtgaggg 362 || ||| || ||||| |||| ||||| || ||||| || || || ||| | |||||| Sbjct: 1067 tctttcgtccccgccgcataccgtagctgagcgtcaatggtggtgccggaggtatgaggg 1008 Query: 363 gtatttgcgtgattaggcatgtagcgccatgggtgatcctt 403 || | || || ||||||||||| |||||||| || ||||| Sbjct: 1007 gtcatagcctggttaggcatgtaacgccatggatggtcctt 967
>gb|AF208029.1|AF208029 Arabidopsis thaliana NAD-dependent formate dehydrogenase 1B (FDH1B) mRNA, complete cds Length = 1508 Score = 50.1 bits (25), Expect = 0.008 Identities = 127/161 (78%) Strand = Plus / Minus Query: 243 tccttgacgatgtagttctccacggggaactcctcgcccttgaagtacctatccaacatg 302 |||||||||||||| ||||| ||||| || || ||||||||||| || ||||||||| Sbjct: 1176 tccttgacgatgtaattctcagtagggaagtcttctcccttgaagtatctctccaacatg 1117 Query: 303 tccttcactccagccgcgtacctcagctgtgcatcaattgtagtcccagagatgtgaggg 362 || ||| || ||||| |||| ||||| || ||||| || || || ||| | |||||| Sbjct: 1116 tctttcgtccccgccgcataccgtagctgagcgtcaatggtggtgccggaggtatgaggg 1057 Query: 363 gtatttgcgtgattaggcatgtagcgccatgggtgatcctt 403 || | || || ||||||||||| |||||||| || ||||| Sbjct: 1056 gtcatagcctggttaggcatgtaacgccatggatggtcctt 1016
>gb|AF208028.1|AF208028 Arabidopsis thaliana NAD-dependent formate dehydrogenase 1A (FDH1A) mRNA, complete cds Length = 1439 Score = 50.1 bits (25), Expect = 0.008 Identities = 127/161 (78%) Strand = Plus / Minus Query: 243 tccttgacgatgtagttctccacggggaactcctcgcccttgaagtacctatccaacatg 302 |||||||||||||| ||||| ||||| || || ||||||||||| || ||||||||| Sbjct: 1184 tccttgacgatgtaattctcagtagggaagtcttctcccttgaagtatctctccaacatg 1125 Query: 303 tccttcactccagccgcgtacctcagctgtgcatcaattgtagtcccagagatgtgaggg 362 || ||| || ||||| |||| ||||| || ||||| || || || ||| | |||||| Sbjct: 1124 tctttcgtccccgccgcataccgtagctgagcgtcaatggtggtgccggaggtatgaggg 1065 Query: 363 gtatttgcgtgattaggcatgtagcgccatgggtgatcctt 403 || | || || ||||||||||| |||||||| || ||||| Sbjct: 1064 gtcatagcctggttaggcatgtaacgccatggatggtcctt 1024
>gb|AY054285.1| Arabidopsis thaliana AT5g14780/T9L3_80 mRNA, complete cds Length = 1494 Score = 50.1 bits (25), Expect = 0.008 Identities = 127/161 (78%) Strand = Plus / Minus Query: 243 tccttgacgatgtagttctccacggggaactcctcgcccttgaagtacctatccaacatg 302 |||||||||||||| ||||| ||||| || || ||||||||||| || ||||||||| Sbjct: 1182 tccttgacgatgtaattctcagtagggaagtcttctcccttgaagtatctctccaacatg 1123 Query: 303 tccttcactccagccgcgtacctcagctgtgcatcaattgtagtcccagagatgtgaggg 362 || ||| || ||||| |||| ||||| || ||||| || || || ||| | |||||| Sbjct: 1122 tctttcgtccccgccgcataccgtagctgagcgtcaatggtggtgccggaggtatgaggg 1063 Query: 363 gtatttgcgtgattaggcatgtagcgccatgggtgatcctt 403 || | || || ||||||||||| |||||||| || ||||| Sbjct: 1062 gtcatagcctggttaggcatgtaacgccatggatggtcctt 1022
>dbj|AK221844.1| Arabidopsis thaliana mRNA for formate dehydrogenase, complete cds, clone: RAFL22-04-J07 Length = 739 Score = 50.1 bits (25), Expect = 0.008 Identities = 127/161 (78%) Strand = Plus / Minus Query: 243 tccttgacgatgtagttctccacggggaactcctcgcccttgaagtacctatccaacatg 302 |||||||||||||| ||||| ||||| || || ||||||||||| || ||||||||| Sbjct: 473 tccttgacgatgtaattctcagtagggaagtcttctcccttgaagtatctctccaacatg 414 Query: 303 tccttcactccagccgcgtacctcagctgtgcatcaattgtagtcccagagatgtgaggg 362 || ||| || ||||| |||| ||||| || ||||| || || || ||| | |||||| Sbjct: 413 tctttcgtccccgccgcataccgtagctgagcgtcaatggtggtgccggaggtatgaggg 354 Query: 363 gtatttgcgtgattaggcatgtagcgccatgggtgatcctt 403 || | || || ||||||||||| |||||||| || ||||| Sbjct: 353 gtcatagcctggttaggcatgtaacgccatggatggtcctt 313
>gb|AY039609.1| Arabidopsis thaliana AT5g14780/T9L3_80 mRNA, complete cds Length = 1443 Score = 50.1 bits (25), Expect = 0.008 Identities = 127/161 (78%) Strand = Plus / Minus Query: 243 tccttgacgatgtagttctccacggggaactcctcgcccttgaagtacctatccaacatg 302 |||||||||||||| ||||| ||||| || || ||||||||||| || ||||||||| Sbjct: 1186 tccttgacgatgtaattctcagtagggaagtcttctcccttgaagtatctctccaacatg 1127 Query: 303 tccttcactccagccgcgtacctcagctgtgcatcaattgtagtcccagagatgtgaggg 362 || ||| || ||||| |||| ||||| || ||||| || || || ||| | |||||| Sbjct: 1126 tctttcgtccccgccgcataccgtagctgagcgtcaatggtggtgccggaggtatgaggg 1067 Query: 363 gtatttgcgtgattaggcatgtagcgccatgggtgatcctt 403 || | || || ||||||||||| |||||||| || ||||| Sbjct: 1066 gtcatagcctggttaggcatgtaacgccatggatggtcctt 1026
>dbj|AB023897.1| Arabidopsis thaliana fdh mRNA for formate dehydrogenase, complete cds Length = 1381 Score = 50.1 bits (25), Expect = 0.008 Identities = 127/161 (78%) Strand = Plus / Minus Query: 243 tccttgacgatgtagttctccacggggaactcctcgcccttgaagtacctatccaacatg 302 |||||||||||||| ||||| ||||| || || ||||||||||| || ||||||||| Sbjct: 1127 tccttgacgatgtaattctcagtagggaagtcttctcccttgaagtatctctccaacatg 1068 Query: 303 tccttcactccagccgcgtacctcagctgtgcatcaattgtagtcccagagatgtgaggg 362 || ||| || ||||| |||| ||||| || ||||| || || || ||| | |||||| Sbjct: 1067 tctttcgtccccgccgcataccgtagctgagcgtcaatggtggtgccggaggtatgaggg 1008 Query: 363 gtatttgcgtgattaggcatgtagcgccatgggtgatcctt 403 || | || || ||||||||||| |||||||| || ||||| Sbjct: 1007 gtcatagcctggttaggcatgtaacgccatggatggtcctt 967
>gb|AF217195.1|AF217195 Arabidopsis thaliana formate dehydrogenase (FDH) mRNA, complete cds Length = 1490 Score = 50.1 bits (25), Expect = 0.008 Identities = 127/161 (78%) Strand = Plus / Minus Query: 243 tccttgacgatgtagttctccacggggaactcctcgcccttgaagtacctatccaacatg 302 |||||||||||||| ||||| ||||| || || ||||||||||| || ||||||||| Sbjct: 1186 tccttgacgatgtaattctcagtagggaagtcttctcccttgaagtatctctccaacatg 1127 Query: 303 tccttcactccagccgcgtacctcagctgtgcatcaattgtagtcccagagatgtgaggg 362 || ||| || ||||| |||| ||||| || ||||| || || || ||| | |||||| Sbjct: 1126 tctttcgtccccgccgcataccgtagctgagcgtcaatggtggtgccggaggtatgaggg 1067 Query: 363 gtatttgcgtgattaggcatgtagcgccatgggtgatcctt 403 || | || || ||||||||||| |||||||| || ||||| Sbjct: 1066 gtcatagcctggttaggcatgtaacgccatggatggtcctt 1026
>gb|AY089191.1| Arabidopsis thaliana clone 7530 mRNA, complete sequence Length = 1514 Score = 50.1 bits (25), Expect = 0.008 Identities = 127/161 (78%) Strand = Plus / Minus Query: 243 tccttgacgatgtagttctccacggggaactcctcgcccttgaagtacctatccaacatg 302 |||||||||||||| ||||| ||||| || || ||||||||||| || ||||||||| Sbjct: 1184 tccttgacgatgtaattctcagtagggaagtcttctcccttgaagtatctctccaacatg 1125 Query: 303 tccttcactccagccgcgtacctcagctgtgcatcaattgtagtcccagagatgtgaggg 362 || ||| || ||||| |||| ||||| || ||||| || || || ||| | |||||| Sbjct: 1124 tctttcgtccccgccgcataccgtagctgagcgtcaatggtggtgccggaggtatgaggg 1065 Query: 363 gtatttgcgtgattaggcatgtagcgccatgggtgatcctt 403 || | || || ||||||||||| |||||||| || ||||| Sbjct: 1064 gtcatagcctggttaggcatgtaacgccatggatggtcctt 1024
>ref|XM_742493.1| Aspergillus fumigatus Af293 NAD-dependent formate dehydrogenase (Afu6g04920) partial mRNA Length = 1257 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Minus Query: 393 gggtgatccttgggtgcgggttgggggaaccagacatcacctccgta 439 ||||| |||||||| || || || ||||||||||||||||| ||||| Sbjct: 1046 gggtggtccttgggggcaggctgagggaaccagacatcaccaccgta 1000
>ref|XM_500012.1| Yarrowia lipolytica CLIB122, YALI0A12353g predicted mRNA Length = 1107 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Minus Query: 393 gggtgatccttgggtgcgggttgggggaaccagacatcacctccgta 439 ||||| |||||||| || || |||||||||||||| ||||| ||||| Sbjct: 875 gggtggtccttgggggcaggctgggggaaccagacgtcaccaccgta 829
>ref|XM_501117.1| Yarrowia lipolytica CLIB122, YALI0B19976g predicted mRNA Length = 1116 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Minus Query: 393 gggtgatccttgggtgcgggttgggggaaccagacatcacctccgta 439 ||||| ||||| || ||||| || ||||||||||||||||| ||||| Sbjct: 875 gggtggtcctttggggcgggctgagggaaccagacatcaccaccgta 829
>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica Length = 3066374 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Plus Query: 393 gggtgatccttgggtgcgggttgggggaaccagacatcacctccgta 439 ||||| ||||| || ||||| || ||||||||||||||||| ||||| Sbjct: 2623928 gggtggtcctttggggcgggctgagggaaccagacatcaccaccgta 2623974
>emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB122 of Yarrowia lipolytica Length = 2303261 Score = 46.1 bits (23), Expect = 0.12 Identities = 41/47 (87%) Strand = Plus / Minus Query: 393 gggtgatccttgggtgcgggttgggggaaccagacatcacctccgta 439 ||||| |||||||| || || |||||||||||||| ||||| ||||| Sbjct: 1289325 gggtggtccttgggggcaggctgggggaaccagacgtcaccaccgta 1289279
>ref|XM_505478.1| Yarrowia lipolytica CLIB122, YALI0F15983g predicted mRNA Length = 1098 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Minus Query: 414 tgggggaaccagacatcacctccgta 439 |||||||||||||| ||||||||||| Sbjct: 854 tgggggaaccagacgtcacctccgta 829
>emb|AL391149.1|ATT9L3 Arabidopsis thaliana DNA chromosome 5, BAC clone T9L3 (ESSA project) Length = 89370 Score = 44.1 bits (22), Expect = 0.49 Identities = 52/62 (83%) Strand = Plus / Minus Query: 243 tccttgacgatgtagttctccacggggaactcctcgcccttgaagtacctatccaacatg 302 |||||||||||||| ||||| ||||| || || ||||||||||| || ||||||||| Sbjct: 46281 tccttgacgatgtaattctcagtagggaagtcttctcccttgaagtatctctccaacatg 46222 Query: 303 tc 304 || Sbjct: 46221 tc 46220
>dbj|AP007164.1| Aspergillus oryzae RIB40 genomic DNA, SC111 Length = 2356219 Score = 44.1 bits (22), Expect = 0.49 Identities = 37/42 (88%) Strand = Plus / Plus Query: 392 tgggtgatccttgggtgcgggttgggggaaccagacatcacc 433 |||||| |||||||| ||||| ||||| ||||||||||||| Sbjct: 126048 tgggtggtccttgggggcgggctggggataccagacatcacc 126089
>gb|DP000052.1| Sus scrofa target 126 genomic scaffold Length = 432382 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 514 cacaatgattacacctttcttc 535 |||||||||||||||||||||| Sbjct: 74796 cacaatgattacacctttcttc 74775
>emb|BX833670.1|CNS0A1M3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL6ZD02 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1428 Score = 44.1 bits (22), Expect = 0.49 Identities = 52/62 (83%) Strand = Plus / Minus Query: 243 tccttgacgatgtagttctccacggggaactcctcgcccttgaagtacctatccaacatg 302 |||||||||||||| ||||| ||||| || || ||||||||||| || ||||||||| Sbjct: 1170 tccttgacgatgtaattctcagtagggaagtcttctcccttgaagtatctctccaacatg 1111 Query: 303 tc 304 || Sbjct: 1110 tc 1109
>emb|CR847947.14| Zebrafish DNA sequence from clone DKEY-56M16 in linkage group 7, complete sequence Length = 205682 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Plus Query: 516 caatgattacacctttcttcat 537 |||||||||||||||||||||| Sbjct: 96836 caatgattacacctttcttcat 96857
>gb|DQ458777.1| Candida boidinii NAD-dependent formate dehydrogenase (FDH1) gene, complete cds Length = 1202 Score = 42.1 bits (21), Expect = 1.9 Identities = 39/45 (86%) Strand = Plus / Minus Query: 389 ccatgggtgatccttgggtgcgggttgggggaaccagacatcacc 433 |||||||||||| || || || ||||| |||||||| |||||||| Sbjct: 935 ccatgggtgatcttttggagctggttgtgggaaccaaacatcacc 891
>ref|XM_503936.1| Yarrowia lipolytica CLIB122, YALI0E14256g predicted mRNA Length = 1107 Score = 42.1 bits (21), Expect = 1.9 Identities = 51/61 (83%) Strand = Plus / Minus Query: 379 gcatgtagcgccatgggtgatccttgggtgcgggttgggggaaccagacatcacctccgt 438 ||||||| | ||| ||||| |||||||| || || |||||| |||||||||||| |||| Sbjct: 889 gcatgtatctccaggggtggtccttgggggcaggctgggggttccagacatcaccaccgt 830 Query: 439 a 439 | Sbjct: 829 a 829
>emb|AJ300721.1|PPI300721 Pinus pinaster partial mRNA for putative NAD-dependent formate dehydrogenase Length = 989 Score = 42.1 bits (21), Expect = 1.9 Identities = 121/153 (79%), Gaps = 1/153 (0%) Strand = Plus / Minus Query: 279 cccttgaagtacctatccaacatgtccttcactccagccgcgtacctcagctgtgcatca 338 ||||||||||| || || | ||| |||||| |||||| || ||||| | ||| ||||| Sbjct: 676 cccttgaagtatctgtctagcatatccttcgttccagctgcataccttatctgggcatct 617 Query: 339 attgtagt-cccagagatgtgaggggtatttgcgtgattaggcatgtagcgccatgggtg 397 |||||||| ||||||||| || || || | || || || |||||| |||||||||| || Sbjct: 616 attgtagtccccagagatatggggagtcatggcatggtttggcatggagcgccatggatg 557 Query: 398 atccttgggtgcgggttgggggaaccagacatc 430 ||| || || || ||||| || ||||| ||||| Sbjct: 556 atcttttggagcaggttgaggaaaccaaacatc 524
>emb|AJ011046.2|CBO011046 Candida boidinii fdh gene Length = 1095 Score = 42.1 bits (21), Expect = 1.9 Identities = 39/45 (86%) Strand = Plus / Minus Query: 389 ccatgggtgatccttgggtgcgggttgggggaaccagacatcacc 433 |||||||||||| || || || ||||| |||||||| |||||||| Sbjct: 885 ccatgggtgatcttttggagctggttgtgggaaccaaacatcacc 841
>gb|AC116412.19| Mus musculus chromosome 5, clone RP24-82A20, complete sequence Length = 191823 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 agtacacacagcacaatcag 45 |||||||||||||||||||| Sbjct: 47716 agtacacacagcacaatcag 47697
>ref|XM_323113.1| Neurospora crassa OR74A FORMATE DEHYDROGENASE (NAD-DEPENDENT FORMATE DEHYDROGENASE) (FDH) (NCU03813.1) partial mRNA Length = 1128 Score = 40.1 bits (20), Expect = 7.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 408 gcgggttgggggaaccagacatcacctccgta 439 ||||| |||||||||||||| ||||| ||||| Sbjct: 869 gcgggctgggggaaccagacgtcaccgccgta 838
>ref|XM_956109.1| Neurospora crassa OR74A FORMATE DEHYDROGENASE (NAD-DEPENDENT FORMATE DEHYDROGENASE) (FDH) (NCU03813.1) partial mRNA Length = 1128 Score = 40.1 bits (20), Expect = 7.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 408 gcgggttgggggaaccagacatcacctccgta 439 ||||| |||||||||||||| ||||| ||||| Sbjct: 869 gcgggctgggggaaccagacgtcaccgccgta 838
>gb|AC122434.2| Mus musculus BAC clone RP24-198G2 from chromosome 8, complete sequence Length = 168940 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 ttactacttgtactggctgg 231 |||||||||||||||||||| Sbjct: 109499 ttactacttgtactggctgg 109518
>gb|AF389525.1| Physcomitrella patens clone PPAR2 mRNA sequence Length = 750 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 527 cctttcttcatcttcgcaat 546 |||||||||||||||||||| Sbjct: 495 cctttcttcatcttcgcaat 476
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 444 gcaatgtgaccgctggagca 463 |||||||||||||||||||| Sbjct: 4231342 gcaatgtgaccgctggagca 4231323
>emb|AL513466.1|NCB18D24 Neurospora crassa DNA linkage group V BAC contig B18D24 Length = 157180 Score = 40.1 bits (20), Expect = 7.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 408 gcgggttgggggaaccagacatcacctccgta 439 ||||| |||||||||||||| ||||| ||||| Sbjct: 20049 gcgggctgggggaaccagacgtcaccgccgta 20080
>emb|AL451018.1|NC99H12 Neurospora crassa DNA linkage group V Cosmid contig 99H12 Length = 85165 Score = 40.1 bits (20), Expect = 7.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 408 gcgggttgggggaaccagacatcacctccgta 439 ||||| |||||||||||||| ||||| ||||| Sbjct: 45192 gcgggctgggggaaccagacgtcaccgccgta 45161
>emb|BX927231.12| Zebrafish DNA sequence from clone DKEYP-26F11 in linkage group 19, complete sequence Length = 104269 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 ctggctggcgagctcgcctt 243 |||||||||||||||||||| Sbjct: 98664 ctggctggcgagctcgcctt 98683
>dbj|AK042534.1| Mus musculus 7 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:A730002B12 product:unclassifiable, full insert sequence Length = 2853 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 49 acctcgtcccagagctttttattc 72 ||||| |||||||||||||||||| Sbjct: 1869 acctcttcccagagctttttattc 1846
>ref|NM_066447.2| Caenorhabditis elegans histone METhyltransferase-like family member (met-2) (met-2) mRNA, complete cds Length = 4185 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 533 ttcatcttcgcaatcttttctttg 556 ||||||||||||||| |||||||| Sbjct: 1754 ttcatcttcgcaatcatttctttg 1731
>gb|AC155816.3| Mus musculus BAC clone RP23-435J8 from chromosome 8, complete sequence Length = 207128 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 ttactacttgtactggctgg 231 |||||||||||||||||||| Sbjct: 42433 ttactacttgtactggctgg 42452
>gb|AC119900.7| Mus musculus chromosome 8, clone RP24-235K6, complete sequence Length = 174540 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 458 ggagcaagcatcagcaacag 477 |||||||||||||||||||| Sbjct: 86231 ggagcaagcatcagcaacag 86250
>gb|AC133169.3| Mus musculus BAC clone RP24-259I15 from 9, complete sequence Length = 163930 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 49 acctcgtcccagagctttttattc 72 ||||| |||||||||||||||||| Sbjct: 82535 acctcttcccagagctttttattc 82558
>gb|L13964.1|NEUFDHA Neurospora crassa formate dehydrogenase (fdh) gene, complete cds Length = 3600 Score = 40.1 bits (20), Expect = 7.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 408 gcgggttgggggaaccagacatcacctccgta 439 ||||| |||||||||||||| ||||| ||||| Sbjct: 2463 gcgggctgggggaaccagacgtcaccgccgta 2432
>gb|L07144.3| Caenorhabditis elegans cosmid R05D3, complete sequence Length = 44910 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 533 ttcatcttcgcaatcttttctttg 556 ||||||||||||||| |||||||| Sbjct: 34305 ttcatcttcgcaatcatttctttg 34282 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,802,482 Number of Sequences: 3902068 Number of extensions: 4802482 Number of successful extensions: 100762 Number of sequences better than 10.0: 70 Number of HSP's better than 10.0 without gapping: 57 Number of HSP's successfully gapped in prelim test: 13 Number of HSP's that attempted gapping in prelim test: 100486 Number of HSP's gapped (non-prelim): 247 length of query: 562 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 539 effective length of database: 17,143,297,704 effective search space: 9240237462456 effective search space used: 9240237462456 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)