| Clone Name | rbags11p18 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_550483.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1549 Score = 404 bits (204), Expect = e-109 Identities = 297/328 (90%) Strand = Plus / Minus Query: 278 gcgatcttgtaccactctgtgtggaaggagccgggcatgtcgaccctctcgtaggtgtgc 337 ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1274 gcgatcttgaaccactcggtgtggaaggagccgggcatgtcgaccctctcgtaggtgtga 1215 Query: 338 gccccgaagtagtccctctgggcctggacgaggttggcaggaagcctgtccctccggtag 397 |||||||| ||||||||||| ||||| || ||||||||||| |||||||||||||||||| Sbjct: 1214 gccccgaaatagtccctctgtgcctgcaccaggttggcaggcagcctgtccctccggtag 1155 Query: 398 gagtcgaagtaggccagactcgcggacatgccgggggtgctgacgccgttgttgatggcg 457 ||||||||||| || |||||||| |||||||| |||||||||||||| ||||||||||| Sbjct: 1154 gagtcgaagtacgcgagactcgccgacatgcctggggtgctgacgccattgttgatggca 1095 Query: 458 aggcagacgaccctcctccacgcggcttgcctgtccatgatctcctgcgcgaactcgggg 517 |||||||| ||||| | ||| || ||||||||||||||||||||||| |||||||| ||| Sbjct: 1094 aggcagaccaccctgcgccatgccgcttgcctgtccatgatctcctgagcgaactcaggg 1035 Query: 518 tcgatgaggaggttggcgagctcaccgttcctgtcgtaggccttcttgatgcggtcgagg 577 || | ||| ||||||||||| || |||||||||||||||||||||||||||||| ||| Sbjct: 1034 tccacgagcaggttggcgaggtcggagttcctgtcgtaggccttcttgatgcggtccagg 975 Query: 578 aagctggcacggatgatgcacccgccct 605 ||| ||||||||||||||||||| |||| Sbjct: 974 aagatggcacggatgatgcaccctccct 947
>ref|NM_185393.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1758 Score = 404 bits (204), Expect = e-109 Identities = 297/328 (90%) Strand = Plus / Minus Query: 278 gcgatcttgtaccactctgtgtggaaggagccgggcatgtcgaccctctcgtaggtgtgc 337 ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1483 gcgatcttgaaccactcggtgtggaaggagccgggcatgtcgaccctctcgtaggtgtga 1424 Query: 338 gccccgaagtagtccctctgggcctggacgaggttggcaggaagcctgtccctccggtag 397 |||||||| ||||||||||| ||||| || ||||||||||| |||||||||||||||||| Sbjct: 1423 gccccgaaatagtccctctgtgcctgcaccaggttggcaggcagcctgtccctccggtag 1364 Query: 398 gagtcgaagtaggccagactcgcggacatgccgggggtgctgacgccgttgttgatggcg 457 ||||||||||| || |||||||| |||||||| |||||||||||||| ||||||||||| Sbjct: 1363 gagtcgaagtacgcgagactcgccgacatgcctggggtgctgacgccattgttgatggca 1304 Query: 458 aggcagacgaccctcctccacgcggcttgcctgtccatgatctcctgcgcgaactcgggg 517 |||||||| ||||| | ||| || ||||||||||||||||||||||| |||||||| ||| Sbjct: 1303 aggcagaccaccctgcgccatgccgcttgcctgtccatgatctcctgagcgaactcaggg 1244 Query: 518 tcgatgaggaggttggcgagctcaccgttcctgtcgtaggccttcttgatgcggtcgagg 577 || | ||| ||||||||||| || |||||||||||||||||||||||||||||| ||| Sbjct: 1243 tccacgagcaggttggcgaggtcggagttcctgtcgtaggccttcttgatgcggtccagg 1184 Query: 578 aagctggcacggatgatgcacccgccct 605 ||| ||||||||||||||||||| |||| Sbjct: 1183 aagatggcacggatgatgcaccctccct 1156
>gb|AF486280.2| Oryza sativa cytosolic 6-phosphogluconate dehydrogenase mRNA, complete cds Length = 1771 Score = 404 bits (204), Expect = e-109 Identities = 297/328 (90%) Strand = Plus / Minus Query: 278 gcgatcttgtaccactctgtgtggaaggagccgggcatgtcgaccctctcgtaggtgtgc 337 ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1476 gcgatcttgaaccactcggtgtggaaggagccgggcatgtcgaccctctcgtaggtgtga 1417 Query: 338 gccccgaagtagtccctctgggcctggacgaggttggcaggaagcctgtccctccggtag 397 |||||||| ||||||||||| ||||| || ||||||||||| |||||||||||||||||| Sbjct: 1416 gccccgaaatagtccctctgtgcctgcaccaggttggcaggcagcctgtccctccggtag 1357 Query: 398 gagtcgaagtaggccagactcgcggacatgccgggggtgctgacgccgttgttgatggcg 457 ||||||||||| || |||||||| |||||||| |||||||||||||| ||||||||||| Sbjct: 1356 gagtcgaagtacgcgagactcgccgacatgcctggggtgctgacgccattgttgatggca 1297 Query: 458 aggcagacgaccctcctccacgcggcttgcctgtccatgatctcctgcgcgaactcgggg 517 |||||||| ||||| | ||| || ||||||||||||||||||||||| |||||||| ||| Sbjct: 1296 aggcagaccaccctgcgccatgccgcttgcctgtccatgatctcctgagcgaactcaggg 1237 Query: 518 tcgatgaggaggttggcgagctcaccgttcctgtcgtaggccttcttgatgcggtcgagg 577 || | ||| ||||||||||| || |||||||||||||||||||||||||||||| ||| Sbjct: 1236 tccacgagcaggttggcgaggtcggagttcctgtcgtaggccttcttgatgcggtccagg 1177 Query: 578 aagctggcacggatgatgcacccgccct 605 ||| ||||||||||||||||||| |||| Sbjct: 1176 aagatggcacggatgatgcaccctccct 1149
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 404 bits (204), Expect = e-109 Identities = 297/328 (90%) Strand = Plus / Minus Query: 278 gcgatcttgtaccactctgtgtggaaggagccgggcatgtcgaccctctcgtaggtgtgc 337 ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 645444 gcgatcttgaaccactcggtgtggaaggagccgggcatgtcgaccctctcgtaggtgtga 645385 Query: 338 gccccgaagtagtccctctgggcctggacgaggttggcaggaagcctgtccctccggtag 397 |||||||| ||||||||||| ||||| || ||||||||||| |||||||||||||||||| Sbjct: 645384 gccccgaaatagtccctctgtgcctgcaccaggttggcaggcagcctgtccctccggtag 645325 Query: 398 gagtcgaagtaggccagactcgcggacatgccgggggtgctgacgccgttgttgatggcg 457 ||||||||||| || |||||||| |||||||| |||||||||||||| ||||||||||| Sbjct: 645324 gagtcgaagtacgcgagactcgccgacatgcctggggtgctgacgccattgttgatggca 645265 Query: 458 aggcagacgaccctcctccacgcggcttgcctgtccatgatctcctgcgcgaactcgggg 517 |||||||| ||||| | ||| || ||||||||||||||||||||||| |||||||| ||| Sbjct: 645264 aggcagaccaccctgcgccatgccgcttgcctgtccatgatctcctgagcgaactcaggg 645205 Query: 518 tcgatgaggaggttggcgagctcaccgttcctgtcgtaggccttcttgatgcggtcgagg 577 || | ||| ||||||||||| || |||||||||||||||||||||||||||||| ||| Sbjct: 645204 tccacgagcaggttggcgaggtcggagttcctgtcgtaggccttcttgatgcggtccagg 645145 Query: 578 aagctggcacggatgatgcacccgccct 605 ||| ||||||||||||||||||| |||| Sbjct: 645144 aagatggcacggatgatgcaccctccct 645117
>dbj|AP001552.1| Oryza sativa (japonica cultivar-group) geneomic DNA, chromosome 6, PAC clone:P0029D06 Length = 150120 Score = 404 bits (204), Expect = e-109 Identities = 297/328 (90%) Strand = Plus / Minus Query: 278 gcgatcttgtaccactctgtgtggaaggagccgggcatgtcgaccctctcgtaggtgtgc 337 ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 51872 gcgatcttgaaccactcggtgtggaaggagccgggcatgtcgaccctctcgtaggtgtga 51813 Query: 338 gccccgaagtagtccctctgggcctggacgaggttggcaggaagcctgtccctccggtag 397 |||||||| ||||||||||| ||||| || ||||||||||| |||||||||||||||||| Sbjct: 51812 gccccgaaatagtccctctgtgcctgcaccaggttggcaggcagcctgtccctccggtag 51753 Query: 398 gagtcgaagtaggccagactcgcggacatgccgggggtgctgacgccgttgttgatggcg 457 ||||||||||| || |||||||| |||||||| |||||||||||||| ||||||||||| Sbjct: 51752 gagtcgaagtacgcgagactcgccgacatgcctggggtgctgacgccattgttgatggca 51693 Query: 458 aggcagacgaccctcctccacgcggcttgcctgtccatgatctcctgcgcgaactcgggg 517 |||||||| ||||| | ||| || ||||||||||||||||||||||| |||||||| ||| Sbjct: 51692 aggcagaccaccctgcgccatgccgcttgcctgtccatgatctcctgagcgaactcaggg 51633 Query: 518 tcgatgaggaggttggcgagctcaccgttcctgtcgtaggccttcttgatgcggtcgagg 577 || | ||| ||||||||||| || |||||||||||||||||||||||||||||| ||| Sbjct: 51632 tccacgagcaggttggcgaggtcggagttcctgtcgtaggccttcttgatgcggtccagg 51573 Query: 578 aagctggcacggatgatgcacccgccct 605 ||| ||||||||||||||||||| |||| Sbjct: 51572 aagatggcacggatgatgcaccctccct 51545
>dbj|AK065920.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013047D08, full insert sequence Length = 1758 Score = 404 bits (204), Expect = e-109 Identities = 297/328 (90%) Strand = Plus / Minus Query: 278 gcgatcttgtaccactctgtgtggaaggagccgggcatgtcgaccctctcgtaggtgtgc 337 ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1483 gcgatcttgaaccactcggtgtggaaggagccgggcatgtcgaccctctcgtaggtgtga 1424 Query: 338 gccccgaagtagtccctctgggcctggacgaggttggcaggaagcctgtccctccggtag 397 |||||||| ||||||||||| ||||| || ||||||||||| |||||||||||||||||| Sbjct: 1423 gccccgaaatagtccctctgtgcctgcaccaggttggcaggcagcctgtccctccggtag 1364 Query: 398 gagtcgaagtaggccagactcgcggacatgccgggggtgctgacgccgttgttgatggcg 457 ||||||||||| || |||||||| |||||||| |||||||||||||| ||||||||||| Sbjct: 1363 gagtcgaagtacgcgagactcgccgacatgcctggggtgctgacgccattgttgatggca 1304 Query: 458 aggcagacgaccctcctccacgcggcttgcctgtccatgatctcctgcgcgaactcgggg 517 |||||||| ||||| | ||| || ||||||||||||||||||||||| |||||||| ||| Sbjct: 1303 aggcagaccaccctgcgccatgccgcttgcctgtccatgatctcctgagcgaactcaggg 1244 Query: 518 tcgatgaggaggttggcgagctcaccgttcctgtcgtaggccttcttgatgcggtcgagg 577 || | ||| ||||||||||| || |||||||||||||||||||||||||||||| ||| Sbjct: 1243 tccacgagcaggttggcgaggtcggagttcctgtcgtaggccttcttgatgcggtccagg 1184 Query: 578 aagctggcacggatgatgcacccgccct 605 ||| ||||||||||||||||||| |||| Sbjct: 1183 aagatggcacggatgatgcaccctccct 1156
>dbj|AK059699.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-C09, full insert sequence Length = 1549 Score = 404 bits (204), Expect = e-109 Identities = 297/328 (90%) Strand = Plus / Minus Query: 278 gcgatcttgtaccactctgtgtggaaggagccgggcatgtcgaccctctcgtaggtgtgc 337 ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1274 gcgatcttgaaccactcggtgtggaaggagccgggcatgtcgaccctctcgtaggtgtga 1215 Query: 338 gccccgaagtagtccctctgggcctggacgaggttggcaggaagcctgtccctccggtag 397 |||||||| ||||||||||| ||||| || ||||||||||| |||||||||||||||||| Sbjct: 1214 gccccgaaatagtccctctgtgcctgcaccaggttggcaggcagcctgtccctccggtag 1155 Query: 398 gagtcgaagtaggccagactcgcggacatgccgggggtgctgacgccgttgttgatggcg 457 ||||||||||| || |||||||| |||||||| |||||||||||||| ||||||||||| Sbjct: 1154 gagtcgaagtacgcgagactcgccgacatgcctggggtgctgacgccattgttgatggca 1095 Query: 458 aggcagacgaccctcctccacgcggcttgcctgtccatgatctcctgcgcgaactcgggg 517 |||||||| ||||| | ||| || ||||||||||||||||||||||| |||||||| ||| Sbjct: 1094 aggcagaccaccctgcgccatgccgcttgcctgtccatgatctcctgagcgaactcaggg 1035 Query: 518 tcgatgaggaggttggcgagctcaccgttcctgtcgtaggccttcttgatgcggtcgagg 577 || | ||| ||||||||||| || |||||||||||||||||||||||||||||| ||| Sbjct: 1034 tccacgagcaggttggcgaggtcggagttcctgtcgtaggccttcttgatgcggtccagg 975 Query: 578 aagctggcacggatgatgcacccgccct 605 ||| ||||||||||||||||||| |||| Sbjct: 974 aagatggcacggatgatgcaccctccct 947
>gb|AF061838.1|AF061838 Zea mays strain W64A x A182E putative cytosolic 6-phosphogluconate dehydrogenase (pdh2) mRNA, complete cds Length = 1686 Score = 398 bits (201), Expect = e-108 Identities = 294/325 (90%) Strand = Plus / Minus Query: 281 atcttgtaccactctgtgtggaaggagccgggcatgtcgaccctctcgtaggtgtgcgcc 340 |||||| ||||||| |||||||| ||||| |||||||||||||||||||||||||| ||| Sbjct: 1522 atcttgaaccactcggtgtggaaagagccaggcatgtcgaccctctcgtaggtgtgagcc 1463 Query: 341 ccgaagtagtccctctgggcctggacgaggttggcaggaagcctgtccctccggtaggag 400 ||||||||||||||||||||||| || ||||||||||| ||||||||||| ||||||||| Sbjct: 1462 ccgaagtagtccctctgggcctgcaccaggttggcaggcagcctgtccctgcggtaggag 1403 Query: 401 tcgaagtaggccagactcgcggacatgccgggggtgctgacgccgttgttgatggcgagg 460 |||||||||||||| || |||||||| || |||||||||||||||||||||||||||||| Sbjct: 1402 tcgaagtaggccaggctagcggacattcccggggtgctgacgccgttgttgatggcgagg 1343 Query: 461 cagacgaccctcctccacgcggcttgcctgtccatgatctcctgcgcgaactcggggtcg 520 || || ||||| | |||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 1342 cacaccaccctgcgccacgccgcctgcctgtccatgatctcctgcgcgaactcggggtct 1283 Query: 521 atgaggaggttggcgagctcaccgttcctgtcgtaggccttcttgatgcggtcgaggaag 580 | ||| ||| ||||||| | |||||||||||||||||||||||||||||| |||||| Sbjct: 1282 acgagcaggctggcgaggcccgggttcctgtcgtaggccttcttgatgcggtccaggaag 1223 Query: 581 ctggcacggatgatgcacccgccct 605 |||| ||||||||||||||||||| Sbjct: 1222 atggcgcggatgatgcacccgccct 1198
>gb|AY108834.1| Zea mays PCO144547 mRNA sequence Length = 1897 Score = 398 bits (201), Expect = e-108 Identities = 294/325 (90%) Strand = Plus / Minus Query: 281 atcttgtaccactctgtgtggaaggagccgggcatgtcgaccctctcgtaggtgtgcgcc 340 |||||| ||||||| |||||||| ||||| |||||||||||||||||||||||||| ||| Sbjct: 1613 atcttgaaccactcggtgtggaaagagccaggcatgtcgaccctctcgtaggtgtgagcc 1554 Query: 341 ccgaagtagtccctctgggcctggacgaggttggcaggaagcctgtccctccggtaggag 400 ||||||||||||||||||||||| || ||||||||||| ||||||||||| ||||||||| Sbjct: 1553 ccgaagtagtccctctgggcctgcaccaggttggcaggcagcctgtccctgcggtaggag 1494 Query: 401 tcgaagtaggccagactcgcggacatgccgggggtgctgacgccgttgttgatggcgagg 460 |||||||||||||| || |||||||| || |||||||||||||||||||||||||||||| Sbjct: 1493 tcgaagtaggccaggctagcggacattcccggggtgctgacgccgttgttgatggcgagg 1434 Query: 461 cagacgaccctcctccacgcggcttgcctgtccatgatctcctgcgcgaactcggggtcg 520 || || ||||| | |||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 1433 cacaccaccctgcgccacgccgcctgcctgtccatgatctcctgcgcgaactcggggtct 1374 Query: 521 atgaggaggttggcgagctcaccgttcctgtcgtaggccttcttgatgcggtcgaggaag 580 | ||| ||| ||||||| | |||||||||||||||||||||||||||||| |||||| Sbjct: 1373 acgagcaggctggcgaggcccgggttcctgtcgtaggccttcttgatgcggtccaggaag 1314 Query: 581 ctggcacggatgatgcacccgccct 605 |||| ||||||||||||||||||| Sbjct: 1313 atggcgcggatgatgcacccgccct 1289
>gb|AY104004.1| Zea mays PCO119210 mRNA sequence Length = 1864 Score = 319 bits (161), Expect = 6e-84 Identities = 284/325 (87%) Strand = Plus / Minus Query: 281 atcttgtaccactctgtgtggaaggagccgggcatgtcgaccctctcgtaggtgtgcgcc 340 |||||| ||||||| |||||||| || || |||||||| ||||||||||| ||||| || Sbjct: 1593 atcttgaaccactcggtgtggaaagaaccaggcatgtcaaccctctcgtacgtgtgagcg 1534 Query: 341 ccgaagtagtccctctgggcctggacgaggttggcaggaagcctgtccctccggtaggag 400 ||||||||||| ||||| ||||| || |||||||| |||||||| ||||| ||||| ||| Sbjct: 1533 ccgaagtagtctctctgagcctgcaccaggttggcgggaagcctatccctgcggtacgag 1474 Query: 401 tcgaagtaggccagactcgcggacatgccgggggtgctgacgccgttgttgatggcgagg 460 ||||||||||||||||| || |||||||| |||||||| ||||| ||||||||||| ||| Sbjct: 1473 tcgaagtaggccagacttgcagacatgcctggggtgctaacgccattgttgatggcaagg 1414 Query: 461 cagacgaccctcctccacgcggcttgcctgtccatgatctcctgcgcgaactcggggtcg 520 ||||| ||||| | ||| || ||||||||||| ||||||||||| |||||||||||||| Sbjct: 1413 cagacaaccctgcgccaggcagcttgcctgtctatgatctcctgggcgaactcggggtca 1354 Query: 521 atgaggaggttggcgagctcaccgttcctgtcgtaggccttcttgatgcggtcgaggaag 580 | |||||||||||| || | | |||||| ||||| |||||||||||||||||||||||| Sbjct: 1353 acgaggaggttggcaaggttagggttcctatcgtacgccttcttgatgcggtcgaggaag 1294 Query: 581 ctggcacggatgatgcacccgccct 605 ||||||||||||||||||| |||| Sbjct: 1293 atggcacggatgatgcaccctccct 1269
>gb|AF061837.1|AF061837 Zea mays strain W64A x A182E putative cytosolic 6-phosphogluconate dehydrogenase (pdh1) mRNA, complete cds Length = 1818 Score = 299 bits (151), Expect = 6e-78 Identities = 259/295 (87%) Strand = Plus / Minus Query: 311 ggcatgtcgaccctctcgtaggtgtgcgccccgaagtagtccctctgggcctggacgagg 370 |||||||| ||||||||||| ||||| || ||||||||||| ||||| ||||| || ||| Sbjct: 1459 ggcatgtcaaccctctcgtacgtgtgagcgccgaagtagtctctctgagcctgcaccagg 1400 Query: 371 ttggcaggaagcctgtccctccggtaggagtcgaagtaggccagactcgcggacatgccg 430 ||||| |||||||| ||||| ||||| |||||||||||||||||||| || |||||||| Sbjct: 1399 ttggcgggaagcctatccctgcggtacgagtcgaagtaggccagacttgcagacatgcct 1340 Query: 431 ggggtgctgacgccgttgttgatggcgaggcagacgaccctcctccacgcggcttgcctg 490 |||||||| ||||| ||||||||||| |||||||| ||||| | ||| || ||||||||| Sbjct: 1339 ggggtgctaacgccattgttgatggcaaggcagacaaccctgcgccaggcagcttgcctg 1280 Query: 491 tccatgatctcctgcgcgaactcggggtcgatgaggaggttggcgagctcaccgttcctg 550 || ||||||||||| |||||||||||||| | |||||||||||| || | | |||||| Sbjct: 1279 tctatgatctcctgggcgaactcggggtcaacgaggaggttggcaaggttagggttccta 1220 Query: 551 tcgtaggccttcttgatgcggtcgaggaagctggcacggatgatgcacccgccct 605 ||||| |||||||||||||||||||||||| ||||||||||||||||||| |||| Sbjct: 1219 tcgtacgccttcttgatgcggtcgaggaagatggcacggatgatgcaccctccct 1165
>gb|BT018534.1| Zea mays clone EL01N0435A08.d mRNA sequence Length = 1814 Score = 297 bits (150), Expect = 2e-77 Identities = 283/326 (86%), Gaps = 1/326 (0%) Strand = Plus / Minus Query: 281 atcttgtaccactctgtgtggaaggagccgggcatgtcgaccctctcgtaggtgtgcgcc 340 |||||| ||||||| |||||||| || || |||||||| ||||||||||| ||||| || Sbjct: 1539 atcttgaaccactcggtgtggaaagaaccaggcatgtcaaccctctcgtacgtgtgagcg 1480 Query: 341 ccgaagtagtccctctgggcctggacgaggttggcaggaagcctgtccctccggtaggag 400 ||||||||||| ||||| ||||| || |||||||| |||||||| ||||| ||||| ||| Sbjct: 1479 ccgaagtagtctctctgagcctgcaccaggttggcgggaagcctatccctgcggtacgag 1420 Query: 401 tcgaagtaggccagactcgcggacatgccgggggtgctgacgccgttgttgatggcgagg 460 ||||||||||||||||| || |||||||| |||||||| ||||| ||||||||||| ||| Sbjct: 1419 tcgaagtaggccagacttgcagacatgcctggggtgctaacgccattgttgatggcaagg 1360 Query: 461 cagacgaccctcctccacgcggcttgcctgtccatgatctcctgcgcgaactcggggtcg 520 ||||| ||||| | ||| || ||||||||||| ||||||||||| |||||||||||||| Sbjct: 1359 cagacaaccctgcgccaggcagcttgcctgtctatgatctcctgggcgaactcggggtca 1300 Query: 521 atgaggaggttggcgagctcaccgttcctgtcgtaggcc-ttcttgatgcggtcgaggaa 579 | |||||||||||| || | | ||||| ||||| ||| |||||||||||||||||||| Sbjct: 1299 acgaggaggttggcaaggttaggtttcctatcgtacgcctttcttgatgcggtcgaggaa 1240 Query: 580 gctggcacggatgatgcacccgccct 605 | ||||||||||||||||||| |||| Sbjct: 1239 gatggcacggatgatgcaccctccct 1214
>gb|AF037036.1|AF037036 Zea mays 6-phosphogluconate dehydrogenase gene, partial cds Length = 1599 Score = 212 bits (107), Expect = 1e-51 Identities = 192/221 (86%) Strand = Plus / Minus Query: 281 atcttgtaccactctgtgtggaaggagccgggcatgtcgaccctctcgtaggtgtgcgcc 340 |||||| ||||||| |||||||| || || |||||||| ||||||||||| ||||| || Sbjct: 221 atcttgaaccactcggtgtggaaagaaccaggcatgtcaaccctctcgtacgtgtgagcg 162 Query: 341 ccgaagtagtccctctgggcctggacgaggttggcaggaagcctgtccctccggtaggag 400 ||||||||||| ||||| ||||| || |||||||| ||||||||||||| ||||| ||| Sbjct: 161 ccgaagtagtctctctgagcctgcaccaggttggcgggaagcctgtcccygcggtacgag 102 Query: 401 tcgaagtaggccagactcgcggacatgccgggggtgctgacgccgttgttgatggcgagg 460 ||||||||||||||||| || |||||||| |||||||| ||||| ||||||||||| ||| Sbjct: 101 tcgaagtaggccagacttgcagacatgcctggggtgctaacgccattgttgatggcaagg 42 Query: 461 cagacgaccctcctccacgcggcttgcctgtccatgatctc 501 ||||| ||||| | ||| || ||||||||||| |||||||| Sbjct: 41 cagacaaccctgcgccaggcagcttgcctgtctatgatctc 1
>ref|NM_001009467.1| Ovis aries 6-phosphogluconate dehydrogenase (decarboxylating) (6-PGDH), mRNA Length = 1918 Score = 60.0 bits (30), Expect = 9e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 326 tcgtaggtgtgcgccccgaagtagtccctctgggcctggacgaggttggc 375 ||||||||||||||||| |||||||| | ||| ||||||| ||||||||| Sbjct: 1437 tcgtaggtgtgcgccccaaagtagtcgcgctgagcctggatgaggttggc 1388
>emb|X60195.1|OA6PDGH Ovine 6-pgdh mRNA for 6-phosphogluconate dehydrogenase Length = 1953 Score = 60.0 bits (30), Expect = 9e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 326 tcgtaggtgtgcgccccgaagtagtccctctgggcctggacgaggttggc 375 ||||||||||||||||| |||||||| | ||| ||||||| ||||||||| Sbjct: 1437 tcgtaggtgtgcgccccaaagtagtcgcgctgagcctggatgaggttggc 1388
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 549 tgtcgtaggccttcttgatgcggtcgaggaagctggcacggatgatgcacccgcc 603 |||||||||||| |||||| |||| |||||| | ||| ||||||||||| ||||| Sbjct: 1303754 tgtcgtaggcctccttgatccggttgaggaaccgggcgcggatgatgcagccgcc 1303700 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Minus Query: 326 tcgtaggtgtgcgccccgaagtagtccctctgggcctgg 364 ||||||||||| || ||||||||||| | |||||||||| Sbjct: 1303977 tcgtaggtgtgggcgccgaagtagtcgcgctgggcctgg 1303939
>ref|XM_515670.1| PREDICTED: Pan troglodytes similar to 6-phosphogluconate dehydrogenase, decarboxylating (LOC459464), mRNA Length = 1794 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 329 taggtgtgcgccccgaagtagtccctctgggcctggacgaggttggcaggaagc 382 |||||||| ||||||||||| |||| ||| ||||||| |||| |||| |||||| Sbjct: 1352 taggtgtgagccccgaagtaatcccgctgagcctggatgaggctggctggaagc 1299
>gb|BC000368.2| Homo sapiens phosphogluconate dehydrogenase, mRNA (cDNA clone MGC:8331 IMAGE:2819330), complete cds Length = 1901 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 329 taggtgtgcgccccgaagtagtccctctgggcctggacgaggttggcaggaagc 382 |||||||| ||||||||||| |||| ||| ||||||| |||| |||| |||||| Sbjct: 1401 taggtgtgagccccgaagtaatcccgctgagcctggatgaggctggctggaagc 1348
>ref|NM_002631.2| Homo sapiens phosphogluconate dehydrogenase (PGD), mRNA Length = 1937 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 329 taggtgtgcgccccgaagtagtccctctgggcctggacgaggttggcaggaagc 382 |||||||| ||||||||||| |||| ||| ||||||| |||| |||| |||||| Sbjct: 1454 taggtgtgagccccgaagtaatcccgctgagcctggatgaggctggctggaagc 1401
>gb|AY532646.1| Capsicum annuum 6-phosphogluconate dehydrogenase mRNA, partial cds Length = 374 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Minus Query: 323 ctctcgtaggtgtgcgccccgaagtagtccctctgggcctggacgaggttggcaggaagc 382 ||||| || ||||| |||||||| ||||||||||| ||||| || ||||| || |||||| Sbjct: 374 ctctcatatgtgtgagccccgaaatagtccctctgagcctgcacaaggtttgctggaagc 315 Query: 383 ct 384 || Sbjct: 314 ct 313
>gb|BT009740.1| Synthetic construct Homo sapiens phosphogluconate dehydrogenase mRNA, partial cds Length = 1452 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 329 taggtgtgcgccccgaagtagtccctctgggcctggacgaggttggcaggaagc 382 |||||||| ||||||||||| |||| ||| ||||||| |||| |||| |||||| Sbjct: 1364 taggtgtgagccccgaagtaatcccgctgagcctggatgaggctggctggaagc 1311
>emb|AL162752.2|NMA1Z2491 Neisseria meningitidis serogroup A strain Z2491 complete genome; segment 1/7 Length = 340806 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 325 ctcgtaggtgtgcgccccgaagtagtccctctgggcctggacgaggttggcagg 378 |||||| |||||||| ||||||||||| | ||| ||||| | |||||||||||| Sbjct: 246079 ctcgtaagtgtgcgcgccgaagtagtcgcgctgtgcctgcaagaggttggcagg 246132
>emb|CR609478.1| full-length cDNA clone CS0DL007YL07 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 1853 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 329 taggtgtgcgccccgaagtagtccctctgggcctggacgaggttggcaggaagc 382 |||||||| ||||||||||| |||| ||| ||||||| |||| |||| |||||| Sbjct: 1407 taggtgtgagccccgaagtaatcccgctgagcctggatgaggctggctggaagc 1354
>emb|CR610891.1| full-length cDNA clone CS0DI028YE21 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1855 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 329 taggtgtgcgccccgaagtagtccctctgggcctggacgaggttggcaggaagc 382 |||||||| ||||||||||| |||| ||| ||||||| |||| |||| |||||| Sbjct: 1404 taggtgtgagccccgaagtaatcccgctgagcctggatgaggctggctggaagc 1351
>emb|CR610133.1| full-length cDNA clone CS0DI065YC03 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1866 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 329 taggtgtgcgccccgaagtagtccctctgggcctggacgaggttggcaggaagc 382 |||||||| ||||||||||| |||| ||| ||||||| |||| |||| |||||| Sbjct: 1409 taggtgtgagccccgaagtaatcccgctgagcctggatgaggctggctggaagc 1356
>emb|CR610062.1| full-length cDNA clone CS0DE012YD20 of Placenta of Homo sapiens (human) Length = 1849 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 329 taggtgtgcgccccgaagtagtccctctgggcctggacgaggttggcaggaagc 382 |||||||| ||||||||||| |||| ||| ||||||| |||| |||| |||||| Sbjct: 1409 taggtgtgagccccgaagtaatcccgctgagcctggatgaggctggctggaagc 1356
>emb|CR608757.1| full-length cDNA clone CS0DI008YI13 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1849 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 329 taggtgtgcgccccgaagtagtccctctgggcctggacgaggttggcaggaagc 382 |||||||| ||||||||||| |||| ||| ||||||| |||| |||| |||||| Sbjct: 1402 taggtgtgagccccgaagtaatcccgctgagcctggatgaggctggctggaagc 1349
>emb|CR607764.1| full-length cDNA clone CS0DE005YC23 of Placenta of Homo sapiens (human) Length = 1877 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 329 taggtgtgcgccccgaagtagtccctctgggcctggacgaggttggcaggaagc 382 |||||||| ||||||||||| |||| ||| ||||||| |||| |||| |||||| Sbjct: 1409 taggtgtgagccccgaagtaatcccgctgagcctggatgaggctggctggaagc 1356
>emb|CR604306.1| full-length cDNA clone CS0DI087YM04 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1811 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 329 taggtgtgcgccccgaagtagtccctctgggcctggacgaggttggcaggaagc 382 |||||||| ||||||||||| |||| ||| ||||||| |||| |||| |||||| Sbjct: 1360 taggtgtgagccccgaagtaatcccgctgagcctggatgaggctggctggaagc 1307
>gb|U30255.1|HSU30255 Homo sapiens phosphogluconate dehydrogenase (PGDH) mRNA, complete cds Length = 1536 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 329 taggtgtgcgccccgaagtagtccctctgggcctggacgaggttggcaggaagc 382 |||||||| ||||||||||| |||| ||| ||||||| |||| |||| |||||| Sbjct: 1370 taggtgtgagccccgaagtaatcccgctgagcctggatgaggctggctggaagc 1317
>gb|AE002098.2| Neisseria meningitidis MC58, complete genome Length = 2272360 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 325 ctcgtaggtgtgcgccccgaagtagtccctctgggcctggacgaggttggcagg 378 |||||| |||||||| ||||||||||| | ||| ||||| | |||||||||||| Sbjct: 12261 ctcgtaagtgtgcgcgccgaagtagtcgcgctgtgcctgcaagaggttggcagg 12314
>gb|AF520275.1| Neisseria gonorrhoeae 6-phosphogluconate dehydrogenase, decarboxylating (gnd) gene, gnd-14 allele, complete cds Length = 1449 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 325 ctcgtaggtgtgcgccccgaagtagtccctctgggcctggacgaggttggcagg 378 |||||| |||||||| ||||||||||| | ||| ||||| | |||||||||||| Sbjct: 1362 ctcgtaagtgtgcgcgccgaagtagtcgcgctgtgcctgcaagaggttggcagg 1309
>gb|AF520274.1| Neisseria gonorrhoeae 6-phosphogluconate dehydrogenase, decarboxylating (gnd) gene, gnd-13 allele, complete cds Length = 1449 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 325 ctcgtaggtgtgcgccccgaagtagtccctctgggcctggacgaggttggcagg 378 |||||| |||||||| ||||||||||| | ||| ||||| | |||||||||||| Sbjct: 1362 ctcgtaagtgtgcgcgccgaagtagtcgcgctgtgcctgcaagaggttggcagg 1309
>gb|AF520273.1| Neisseria gonorrhoeae 6-phosphogluconate dehydrogenase, decarboxylating (gnd) gene, gnd-12 allele, complete cds Length = 1449 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 325 ctcgtaggtgtgcgccccgaagtagtccctctgggcctggacgaggttggcagg 378 |||||| |||||||| ||||||||||| | ||| ||||| | |||||||||||| Sbjct: 1362 ctcgtaagtgtgcgcgccgaagtagtcgcgctgtgcctgcaagaggttggcagg 1309
>gb|AF520272.1| Neisseria gonorrhoeae 6-phosphogluconate dehydrogenase, decarboxylating (gnd) gene, gnd-11 allele, complete cds Length = 1449 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 325 ctcgtaggtgtgcgccccgaagtagtccctctgggcctggacgaggttggcagg 378 |||||| |||||||| ||||||||||| | ||| ||||| | |||||||||||| Sbjct: 1362 ctcgtaagtgtgcgcgccgaagtagtcgcgctgtgcctgcaagaggttggcagg 1309
>gb|AF520271.1| Neisseria gonorrhoeae 6-phosphogluconate dehydrogenase, decarboxylating (gnd) gene, gnd-10 allele, complete cds Length = 1449 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 325 ctcgtaggtgtgcgccccgaagtagtccctctgggcctggacgaggttggcagg 378 |||||| |||||||| ||||||||||| | ||| ||||| | |||||||||||| Sbjct: 1362 ctcgtaagtgtgcgcgccgaagtagtcgcgctgtgcctgcaagaggttggcagg 1309
>gb|AF520270.1| Neisseria gonorrhoeae 6-phosphogluconate dehydrogenase, decarboxylating (gnd) gene, gnd-9 allele, complete cds Length = 1449 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 325 ctcgtaggtgtgcgccccgaagtagtccctctgggcctggacgaggttggcagg 378 |||||| |||||||| ||||||||||| | ||| ||||| | |||||||||||| Sbjct: 1362 ctcgtaagtgtgcgcgccgaagtagtcgcgctgtgcctgcaagaggttggcagg 1309
>gb|AF520269.1| Neisseria gonorrhoeae 6-phosphogluconate dehydrogenase, decarboxylating (gnd) gene, gnd-8 allele, complete cds Length = 1449 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 325 ctcgtaggtgtgcgccccgaagtagtccctctgggcctggacgaggttggcagg 378 |||||| |||||||| ||||||||||| | ||| ||||| | |||||||||||| Sbjct: 1362 ctcgtaagtgtgcgcgccgaagtagtcgcgctgtgcctgcaagaggttggcagg 1309
>gb|AF520268.1| Neisseria gonorrhoeae 6-phosphogluconate dehydrogenase, decarboxylating (gnd) gene, gnd-7 allele, complete cds Length = 1449 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 325 ctcgtaggtgtgcgccccgaagtagtccctctgggcctggacgaggttggcagg 378 |||||| |||||||| ||||||||||| | ||| ||||| | |||||||||||| Sbjct: 1362 ctcgtaagtgtgcgcgccgaagtagtcgcgctgtgcctgcaagaggttggcagg 1309
>gb|AF520267.1| Neisseria gonorrhoeae 6-phosphogluconate dehydrogenase, decarboxylating (gnd) gene, gnd-6 allele, complete cds Length = 1449 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 325 ctcgtaggtgtgcgccccgaagtagtccctctgggcctggacgaggttggcagg 378 |||||| |||||||| ||||||||||| | ||| ||||| | |||||||||||| Sbjct: 1362 ctcgtaagtgtgcgcgccgaagtagtcgcgctgtgcctgcaagaggttggcagg 1309
>gb|AF520266.1| Neisseria gonorrhoeae 6-phosphogluconate dehydrogenase, decarboxylating (gnd) gene, gnd-5 allele, complete cds Length = 1449 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 325 ctcgtaggtgtgcgccccgaagtagtccctctgggcctggacgaggttggcagg 378 |||||| |||||||| ||||||||||| | ||| ||||| | |||||||||||| Sbjct: 1362 ctcgtaagtgtgcgcgccgaagtagtcgcgctgtgcctgcaagaggttggcagg 1309
>gb|AF520265.1| Neisseria gonorrhoeae 6-phosphogluconate dehydrogenase, decarboxylating (gnd) gene, gnd-4 allele, complete cds Length = 1449 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 325 ctcgtaggtgtgcgccccgaagtagtccctctgggcctggacgaggttggcagg 378 |||||| |||||||| ||||||||||| | ||| ||||| | |||||||||||| Sbjct: 1362 ctcgtaagtgtgcgcgccgaagtagtcgcgctgtgcctgcaagaggttggcagg 1309
>gb|AF520264.1| Neisseria gonorrhoeae 6-phosphogluconate dehydrogenase, decarboxylating (gnd) gene, gnd-3 allele, complete cds Length = 1449 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 325 ctcgtaggtgtgcgccccgaagtagtccctctgggcctggacgaggttggcagg 378 |||||| |||||||| ||||||||||| | ||| ||||| | |||||||||||| Sbjct: 1362 ctcgtaagtgtgcgcgccgaagtagtcgcgctgtgcctgcaagaggttggcagg 1309
>gb|AF520263.1| Neisseria gonorrhoeae 6-phosphogluconate dehydrogenase, decarboxylating (gnd) gene, gnd-2 allele, complete cds Length = 1449 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 325 ctcgtaggtgtgcgccccgaagtagtccctctgggcctggacgaggttggcagg 378 |||||| |||||||| ||||||||||| | ||| ||||| | |||||||||||| Sbjct: 1362 ctcgtaagtgtgcgcgccgaagtagtcgcgctgtgcctgcaagaggttggcagg 1309
>gb|AY891432.1| Synthetic construct Homo sapiens clone FLH014197.01L phosphogluconate dehydrogenase (PGD) mRNA, partial cds Length = 1452 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 329 taggtgtgcgccccgaagtagtccctctgggcctggacgaggttggcaggaagc 382 |||||||| ||||||||||| |||| ||| ||||||| |||| |||| |||||| Sbjct: 1364 taggtgtgagccccgaagtaatcccgctgagcctggatgaggctggctggaagc 1311
>gb|AE004969.1| Neisseria gonorrhoeae FA 1090, complete genome Length = 2153922 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 325 ctcgtaggtgtgcgccccgaagtagtccctctgggcctggacgaggttggcagg 378 |||||| |||||||| ||||||||||| | ||| ||||| | |||||||||||| Sbjct: 1892953 ctcgtaagtgtgcgcgccgaagtagtcgcgctgtgcctgcaagaggttggcagg 1892900
>gb|DQ415920.1| Cleome spinosa clone BAC Cs3, complete sequence Length = 141360 Score = 50.1 bits (25), Expect = 0.009 Identities = 163/209 (77%) Strand = Plus / Minus Query: 313 catgtcgaccctctcgtaggtgtgcgccccgaagtagtccctctgggcctggacgaggtt 372 |||||| |||||||| || ||||| || || |||||||| || || || || || || || Sbjct: 82244 catgtcaaccctctcatatgtgtgagctccaaagtagtctctttgagcttgaaccagatt 82185 Query: 373 ggcaggaagcctgtccctccggtaggagtcgaagtaggccagactcgcggacatgccggg 432 || || | ||| ||||||| ||| ||||||||||| |||||||| || ||||| || || Sbjct: 82184 cgctggcaacctctccctcctgtacgagtcgaagtatgccagactggctgacattcccgg 82125 Query: 433 ggtgctgacgccgttgttgatggcgaggcagacgaccctcctccacgcggcttgcctgtc 492 ||||||| || ||| ||||| ||| | || || || ||||| |||| |||||| || Sbjct: 82124 tgtgctgattcccgagtttatggccagggacactactcttctccaagcggattgcctctc 82065 Query: 493 catgatctcctgcgcgaactcggggtcga 521 |||||||||| || |||||||| |||| Sbjct: 82064 gatgatctcctttgcaaactcgggatcga 82036
>gb|AF394515.1| Porphyra yezoensis 6-phosphogluconate dehydrogenase (gnd) mRNA, partial cds Length = 1177 Score = 50.1 bits (25), Expect = 0.009 Identities = 52/61 (85%) Strand = Plus / Minus Query: 315 tgtcgaccctctcgtaggtgtgcgccccgaagtagtccctctgggcctggacgaggttgg 374 |||| |||| |||||| ||||| || || |||||||| | ||||||||||| |||||||| Sbjct: 1081 tgtccacccgctcgtacgtgtgggcgccaaagtagtcgcgctgggcctggaggaggttgg 1022 Query: 375 c 375 | Sbjct: 1021 c 1021
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 50.1 bits (25), Expect = 0.009 Identities = 43/49 (87%) Strand = Plus / Plus Query: 325 ctcgtaggtgtgcgccccgaagtagtccctctgggcctggacgaggttg 373 |||||||||||| || ||||||||||| | |||||||||| ||||||| Sbjct: 1195356 ctcgtaggtgtgggcgccgaagtagtcgcgctgggcctgggtgaggttg 1195404
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 48.1 bits (24), Expect = 0.034 Identities = 36/40 (90%) Strand = Plus / Plus Query: 565 gatgcggtcgaggaagctggcacggatgatgcacccgccc 604 ||||||||| |||||| ||| |||||||||||||||||| Sbjct: 8642453 gatgcggtccaggaaggcggcgcggatgatgcacccgccc 8642492 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 329 taggtgtgcgccccgaagtagtccc 353 |||||||||||||||||| |||||| Sbjct: 8642217 taggtgtgcgccccgaagaagtccc 8642241
>gb|DQ493912.1| Anguilla anguilla 6-phosphogluconate dehydrogenase mRNA, partial cds Length = 290 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Minus Query: 329 taggtgtgcgccccgaagtagtccctctgggcctggacgaggttggc 375 ||||||||||| || || || |||||||||||||||| |||||||| Sbjct: 260 taggtgtgcgcgccaaaataatccctctgggcctggagcaggttggc 214
>gb|DQ415921.1| Cleome spinosa clone BAC Cs2, complete sequence Length = 132380 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Minus Query: 386 tccctccggtaggagtcgaagtaggccagactcgc 420 ||||||| ||| ||||||||||| ||||||||||| Sbjct: 84219 tccctcctgtacgagtcgaagtacgccagactcgc 84185
>emb|Z98269.1|DMC87B1 Drosophila melanogaster cosmid clone 87B1 Length = 40070 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Minus Query: 329 taggtgtgcgccccgaagtagtccctctgggcctg 363 |||||||| || |||||||| |||||||||||||| Sbjct: 25460 taggtgtgggcgccgaagtaatccctctgggcctg 25426
>emb|X16638.1|SSPGDMR Pig pgd mRNA for 6-phosphogluconate dehydrogenase (EC. 1.1.1.44) Length = 1110 Score = 46.1 bits (23), Expect = 0.13 Identities = 41/47 (87%) Strand = Plus / Minus Query: 329 taggtgtgcgccccgaagtagtccctctgggcctggacgaggttggc 375 |||||||| ||||||||||| |||| ||| ||||||| |||||||| Sbjct: 665 taggtgtgagccccgaagtaatcccgctgcgcctggatcaggttggc 619
>ref|NM_057512.3| Drosophila melanogaster Phosphogluconate dehydrogenase CG3724-RA (Pgd), mRNA Length = 1895 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Minus Query: 329 taggtgtgcgccccgaagtagtccctctgggcctg 363 |||||||| || |||||||| |||||||||||||| Sbjct: 1629 taggtgtgggcgccgaagtaatccctctgggcctg 1595
>gb|AY089447.1| Drosophila melanogaster AT26455 full insert cDNA Length = 1915 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Minus Query: 329 taggtgtgcgccccgaagtagtccctctgggcctg 363 |||||||| || |||||||| |||||||||||||| Sbjct: 1629 taggtgtgggcgccgaagtaatccctctgggcctg 1595
>gb|AC104146.4| Drosophila melanogaster X BAC RP98-32O19 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 177724 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Minus Query: 329 taggtgtgcgccccgaagtagtccctctgggcctg 363 |||||||| || |||||||| |||||||||||||| Sbjct: 122259 taggtgtgggcgccgaagtaatccctctgggcctg 122225
>gb|AY676468.1| Zalophus californianus microsatellite ZcCgDh46 sequence Length = 456 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 65 ggaagtagtggagggactggaga 87 ||||||||||||||||||||||| Sbjct: 412 ggaagtagtggagggactggaga 434
>gb|AE003423.2| Drosophila melanogaster chromosome X, section 7 of 74 of the complete sequence Length = 292830 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Minus Query: 329 taggtgtgcgccccgaagtagtccctctgggcctg 363 |||||||| || |||||||| |||||||||||||| Sbjct: 81938 taggtgtgggcgccgaagtaatccctctgggcctg 81904
>gb|M80598.1|DROPGD Drosophila melanogaster 6-phosphogluconate dehydrogenase (Pgd) gene, complete cds Length = 4767 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Minus Query: 329 taggtgtgcgccccgaagtagtccctctgggcctg 363 |||||||| || |||||||| |||||||||||||| Sbjct: 4059 taggtgtgggcgccgaagtaatccctctgggcctg 4025
>gb|U02288.1|DSU02288 Drosophila simulans 6-phosphogluconate dehydrogenase (Pgd) gene, complete cds Length = 4290 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Minus Query: 329 taggtgtgcgccccgaagtagtccctctgggcctg 363 |||||||| || |||||||| |||||||||||||| Sbjct: 3585 taggtgtgggcgccgaagtaatccctctgggcctg 3551
>ref|XM_500938.1| Yarrowia lipolytica CLIB122, YALI0B15598g predicted mRNA Length = 1470 Score = 44.1 bits (22), Expect = 0.53 Identities = 34/38 (89%) Strand = Plus / Minus Query: 328 gtaggtgtgcgccccgaagtagtccctctgggcctgga 365 ||||||||| || ||||||||||| | ||||||||||| Sbjct: 1383 gtaggtgtgggcgccgaagtagtctcgctgggcctgga 1346
>gb|U14465.1|EVU14465 Escherichia vulneris ATCC 33821 6-phosphogluconate dehydrogenase (gnd) gene, partial cds Length = 1335 Score = 44.1 bits (22), Expect = 0.53 Identities = 34/38 (89%) Strand = Plus / Minus Query: 328 gtaggtgtgcgccccgaagtagtccctctgggcctgga 365 |||||| ||||| ||||||||||| | ||||||||||| Sbjct: 1326 gtaggtatgcgcaccgaagtagtcgcgctgggcctgga 1289
>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica Length = 3066374 Score = 44.1 bits (22), Expect = 0.53 Identities = 34/38 (89%) Strand = Plus / Minus Query: 328 gtaggtgtgcgccccgaagtagtccctctgggcctgga 365 ||||||||| || ||||||||||| | ||||||||||| Sbjct: 2070833 gtaggtgtgggcgccgaagtagtctcgctgggcctgga 2070796
>gb|BT009148.1| Triticum aestivum clone wl1n.pk0059.g7:fis, full insert mRNA sequence Length = 890 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 518 tcgatgaggaggttggcgagc 538 ||||||||||||||||||||| Sbjct: 625 tcgatgaggaggttggcgagc 605
>ref|XM_776301.1| PREDICTED: Strongylocentrotus purpuratus similar to 6-phosphogluconate dehydrogenase, decarboxylating (LOC575941), mRNA Length = 1890 Score = 42.1 bits (21), Expect = 2.1 Identities = 48/57 (84%) Strand = Plus / Minus Query: 325 ctcgtaggtgtgcgccccgaagtagtccctctgggcctggacgaggttggcaggaag 381 |||||||||||| || || |||||||| | ||| ||||||| ||| ||||| ||||| Sbjct: 1383 ctcgtaggtgtgtgcaccaaagtagtcacgctgagcctggatgagattggctggaag 1327
>emb|AJ843880.1| Platichthys flesus partial mRNA for 6-Phosphogluconate dehydrogenase (pgd gene) Length = 918 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 344 aagtagtccctctgggcctggacgaggtt 372 ||||| |||||||||||||||| |||||| Sbjct: 617 aagtaatccctctgggcctggaggaggtt 589
>gb|AC182751.1| Gasterosteus aculeatus clone VMRC26-154K14, complete sequence Length = 166500 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 304 ggagccgggcatgtcgaccct 324 ||||||||||||||||||||| Sbjct: 123114 ggagccgggcatgtcgaccct 123094
>gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome Length = 2364842 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 236 ctcggtagaccagcggcagc 255 |||||||||||||||||||| Sbjct: 971987 ctcggtagaccagcggcagc 971968
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 549 tgtcgtaggccttcttgatg 568 |||||||||||||||||||| Sbjct: 2870765 tgtcgtaggccttcttgatg 2870746
>gb|AC115723.13| Mus musculus chromosome 5, clone RP23-17D18, complete sequence Length = 206470 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 289 ccactctgtgtggaaggagc 308 |||||||||||||||||||| Sbjct: 142537 ccactctgtgtggaaggagc 142518
>ref|XM_363384.1| Magnaporthe grisea 70-15 hypothetical protein (MG01310.4) partial mRNA Length = 837 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 516 ggtcgatgaggaggttggcg 535 |||||||||||||||||||| Sbjct: 744 ggtcgatgaggaggttggcg 763
>ref|XM_743291.1| Aspergillus fumigatus Af293 hypothetical protein (Afu3g00640) partial mRNA Length = 1167 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 441 cgccgttgttgatggcgagg 460 |||||||||||||||||||| Sbjct: 171 cgccgttgttgatggcgagg 190
>gb|AC113276.9| Mus musculus chromosome 5, clone RP23-383E21, complete sequence Length = 245002 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 gtagaaaataaatacaggac 124 |||||||||||||||||||| Sbjct: 40921 gtagaaaataaatacaggac 40940
>gb|AC103363.6| Mus musculus chromosome 17, clone RP24-247H9, complete sequence Length = 222909 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 ttgtagaaaataaatacagg 122 |||||||||||||||||||| Sbjct: 161597 ttgtagaaaataaatacagg 161578
>gb|CP000243.1| Escherichia coli UTI89, complete genome Length = 5065741 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 496 gatctcctgcgcgaactcgg 515 |||||||||||||||||||| Sbjct: 4960572 gatctcctgcgcgaactcgg 4960553
>emb|AL138685.21| Human DNA sequence from clone RP11-186J16 on chromosome 13 Contains the 3' end of the LHFP gene for lipoma HMGIC fusion partner, complete sequence Length = 84686 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 74 ggagggactggagagaatat 93 |||||||||||||||||||| Sbjct: 48411 ggagggactggagagaatat 48430
>emb|AL049648.9|HSJ1178H5 Human DNA sequence from clone RP5-1178H5 on chromosome 20 Contains the RPL17P1 gene for ribosomal protein L17 pseudogene 1 a novel gene and part of the C20orf26 gene, complete sequence Length = 126130 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 tagtaaaaattaaacggcag 158 |||||||||||||||||||| Sbjct: 107285 tagtaaaaattaaacggcag 107266
>emb|BX927152.1| Corynebacterium glutamicum ATCC 13032, IS fingerprint type 4-5, complete genome; segment 5/10 Length = 349799 Score = 40.1 bits (20), Expect = 8.2 Identities = 53/64 (82%) Strand = Plus / Plus Query: 288 accactctgtgtggaaggagccgggcatgtcgaccctctcgtaggtgtgcgccccgaagt 347 ||||||| |||||||||||||| | |||||| | || |||||||||||| |||||| Sbjct: 136142 accactcggtgtggaaggagccatccttgtcgatgcgcttgtaggtgtgcgcaccgaaga 136201 Query: 348 agtc 351 |||| Sbjct: 136202 agtc 136205
>emb|AJ130772.1|LDI130772 Laminaria digitata mRNA 6-phosphogluconate dehydrogenase Length = 3158 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 392 cggtaggagtcgaagtaggccaga 415 ||||||||||||||||||| |||| Sbjct: 1380 cggtaggagtcgaagtaggacaga 1357
>gb|AC112656.4| Homo sapiens X BAC RP11-555H23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 142650 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 136 gaatagtaaaaattaaacgg 155 |||||||||||||||||||| Sbjct: 38597 gaatagtaaaaattaaacgg 38616
>gb|AC022507.26| Homo sapiens 12 BAC RP11-25J3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 154954 Score = 40.1 bits (20), Expect = 8.2 Identities = 38/44 (86%) Strand = Plus / Minus Query: 332 gtgtgcgccccgaagtagtccctctgggcctggacgaggttggc 375 ||||| ||||||||||| |||| ||| | ||||| ||||||||| Sbjct: 102703 gtgtgagccccgaagtaatcccgctgagtctggatgaggttggc 102660
>gb|AC090965.42| Papio anubis clone rp41-239m8, complete sequence Length = 172715 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 tatgtgatctccttgtagaa 110 |||||||||||||||||||| Sbjct: 104843 tatgtgatctccttgtagaa 104862
>gb|AC090964.10| Papio anubis clone rp41-177g23, complete sequence Length = 182747 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 tatgtgatctccttgtagaa 110 |||||||||||||||||||| Sbjct: 91765 tatgtgatctccttgtagaa 91746
>gb|AF394510.1| Phytophthora infestans 6-phosphogluconate dehydrogenase (gnd) mRNA, complete cds Length = 1654 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 582 tggcacggatgatgcacccgccct 605 |||||||||||||||| ||||||| Sbjct: 1163 tggcacggatgatgcagccgccct 1140
>dbj|AK161172.1| Mus musculus 0 day neonate head cDNA, RIKEN full-length enriched library, clone:4831433I04 product:Castration induced prostatic apoptosis related protein-1, (CIPAR- 1) homolog [Rattus norvegicus], full insert sequence Length = 4942 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 289 ccactctgtgtggaaggagc 308 |||||||||||||||||||| Sbjct: 1534 ccactctgtgtggaaggagc 1553
>dbj|AK167402.1| Mus musculus 14 days pregnant adult female placenta cDNA, RIKEN full-length enriched library, clone:I530012D03 product:Castration induced prostatic apoptosis related protein-1, (CIPAR- 1) homolog [Rattus norvegicus], full insert sequence Length = 2072 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 289 ccactctgtgtggaaggagc 308 |||||||||||||||||||| Sbjct: 1560 ccactctgtgtggaaggagc 1579
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome Length = 3570858 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 417 tcgcggacatgccgggggtg 436 |||||||||||||||||||| Sbjct: 415190 tcgcggacatgccgggggtg 415209
>gb|AC154004.7| Mus musculus 6 BAC RP24-169F24 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 168376 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 66 gaagtagtggagggactggagaga 89 |||||| ||||||||||||||||| Sbjct: 48900 gaagtattggagggactggagaga 48877
>gb|AF287263.1|AF287263 Mus musculus ATP-binding cassette 1, sub-family A, member 1 (Abca1) gene, complete cds Length = 278572 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 tcttgtaccactctgtgtgg 301 |||||||||||||||||||| Sbjct: 4841 tcttgtaccactctgtgtgg 4860
>dbj|BA000036.3| Corynebacterium glutamicum ATCC 13032 DNA, complete genome Length = 3309401 Score = 40.1 bits (20), Expect = 8.2 Identities = 53/64 (82%) Strand = Plus / Plus Query: 288 accactctgtgtggaaggagccgggcatgtcgaccctctcgtaggtgtgcgccccgaagt 347 ||||||| |||||||||||||| | |||||| | || |||||||||||| |||||| Sbjct: 1530367 accactcggtgtggaaggagccatccttgtcgatgcgcttgtaggtgtgcgcaccgaaga 1530426 Query: 348 agtc 351 |||| Sbjct: 1530427 agtc 1530430
>ref|NM_145562.1| Mus musculus RIKEN cDNA 9130213B05 gene (9130213B05Rik), mRNA Length = 2101 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 289 ccactctgtgtggaaggagc 308 |||||||||||||||||||| Sbjct: 1572 ccactctgtgtggaaggagc 1591
>gb|AF542178.1| Neisseria polysaccharea phenylalanyl-tRNA synthetase alpha chain (pheS) gene, partial cds; hypothetical protein, truncated very short patch repair endonuclease, methylase, hypothetical protein, and hypothetical protein genes, complete cds; and phenylalanyl-tRNA synthetase beta chain (pheT) gene, partial cds Length = 2455 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 tcttccctccagggtttgat 55 |||||||||||||||||||| Sbjct: 1948 tcttccctccagggtttgat 1929
>gb|AC078820.28| Homo sapiens 12 BAC RP11-114H23 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 164812 Score = 40.1 bits (20), Expect = 8.2 Identities = 38/44 (86%) Strand = Plus / Plus Query: 332 gtgtgcgccccgaagtagtccctctgggcctggacgaggttggc 375 ||||| ||||||||||| |||| ||| | ||||| ||||||||| Sbjct: 95710 gtgtgagccccgaagtaatcccgctgagtctggatgaggttggc 95753
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 339 ccccgaagtagtccctctgggcctggac 366 ||||||||||| ||||||||| |||||| Sbjct: 1663461 ccccgaagtaggccctctggggctggac 1663488
>gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome Length = 3940880 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 99 ctccttgtagaaaataaata 118 |||||||||||||||||||| Sbjct: 2606395 ctccttgtagaaaataaata 2606376
>gb|BC006604.1| Mus musculus RIKEN cDNA 9130213B05 gene, mRNA (cDNA clone MGC:11719 IMAGE:3966312), complete cds Length = 2101 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 289 ccactctgtgtggaaggagc 308 |||||||||||||||||||| Sbjct: 1572 ccactctgtgtggaaggagc 1591
>gb|AY108628.1| Zea mays PCO126621 mRNA sequence Length = 792 Score = 40.1 bits (20), Expect = 8.2 Identities = 62/76 (81%) Strand = Plus / Minus Query: 530 ttggcgagctcaccgttcctgtcgtaggccttcttgatgcggtcgaggaagctggcacgg 589 |||||||||||| ||||||||||| || ||||||| | || ||||| || |||||| Sbjct: 205 ttggcgagctcaggattcctgtcgtacgcgctcttgatcctatcaaggaacctcgcacgg 146 Query: 590 atgatgcacccgccct 605 || ||||| ||||||| Sbjct: 145 ataatgcagccgccct 130
>gb|AC115062.13| Mus musculus chromosome 3, clone RP24-399B3, complete sequence Length = 198727 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 aaggactcatgactggcagc 195 |||||||||||||||||||| Sbjct: 144520 aaggactcatgactggcagc 144539
>gb|AC154001.5| Mus musculus 6 BAC RP24-419M4 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 183830 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 66 gaagtagtggagggactggagaga 89 |||||| ||||||||||||||||| Sbjct: 89596 gaagtattggagggactggagaga 89619
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 339 ccccgaagtagtccctctgggcctggac 366 ||||||||||| ||||||||| |||||| Sbjct: 1342477 ccccgaagtaggccctctggggctggac 1342504
>gb|AC154286.1| Mus musculus BAC clone RP24-476G22 from 17, complete sequence Length = 181094 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 ttgtagaaaataaatacagg 122 |||||||||||||||||||| Sbjct: 28645 ttgtagaaaataaatacagg 28626
>emb|AL833806.7| Mouse DNA sequence from clone RP23-425H11 on chromosome 4, complete sequence Length = 55805 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 tcttgtaccactctgtgtgg 301 |||||||||||||||||||| Sbjct: 50955 tcttgtaccactctgtgtgg 50936
>emb|AL133304.4|CNS01DUL Human chromosome 14 DNA sequence BAC R-116N8 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 141905 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 104 tgtagaaaataaatacagga 123 |||||||||||||||||||| Sbjct: 83472 tgtagaaaataaatacagga 83453 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,120,083 Number of Sequences: 3902068 Number of extensions: 5120083 Number of successful extensions: 103707 Number of sequences better than 10.0: 104 Number of HSP's better than 10.0 without gapping: 102 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 103016 Number of HSP's gapped (non-prelim): 688 length of query: 605 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 582 effective length of database: 17,143,297,704 effective search space: 9977399263728 effective search space used: 9977399263728 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)