| Clone Name | rbags12e22 |
|---|---|
| Clone Library Name | barley_pub |
>emb|Z23130.1|HVBLT63A H.vulgare BLT63 mRNA, complete CDS Length = 1560 Score = 361 bits (182), Expect = 5e-97 Identities = 195/198 (98%), Gaps = 1/198 (0%) Strand = Plus / Minus Query: 1 ttccaccaacacaaccgaacgatacaatgaccagtgctttaagcagttcaaacacttctc 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1541 ttccaccaacacaaccgaacgatacaatgaccagagctttaagcagttcaaacacttctc 1482 Query: 61 gacacaaataacccaagcgactaaaacaactatcgccaccaccaaacaccgccaccgcca 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1481 gacacaaataacccaagcgactaaaacaactatcgccaccaccaaacaccgccaccgcca 1422 Query: 121 ccatagttgtggtaaagaacctgacaccatnctcatttcttcttgatcgcagccttggta 180 |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1421 ccatagatgtggtaaagaacctgacaccat-ctcatttcttcttgatcgcagccttggta 1363 Query: 181 accttggcgccggtcggc 198 |||||||||||||||||| Sbjct: 1362 accttggcgccggtcggc 1345
>gb|L11740.1|BLYEFIA Barley elongation factor 1 alpha, (EF-1A) mRNA sequence Length = 1725 Score = 361 bits (182), Expect = 5e-97 Identities = 195/198 (98%), Gaps = 1/198 (0%) Strand = Plus / Minus Query: 1 ttccaccaacacaaccgaacgatacaatgaccagtgctttaagcagttcaaacacttctc 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1602 ttccaccaacacaaccgaacgatacaatgaccagagctttaagcagttcaaacacttctc 1543 Query: 61 gacacaaataacccaagcgactaaaacaactatcgccaccaccaaacaccgccaccgcca 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1542 gacacaaataacccaagcgactaaaacaactatcgccaccaccaaacaccgccaccgcca 1483 Query: 121 ccatagttgtggtaaagaacctgacaccatnctcatttcttcttgatcgcagccttggta 180 |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1482 ccatagatgtggtaaagaacctgacaccat-ctcatttcttcttgatcgcagccttggta 1424 Query: 181 accttggcgccggtcggc 198 |||||||||||||||||| Sbjct: 1423 accttggcgccggtcggc 1406
>gb|M90077.1|WHTTEF1X Wheat translation elongation factor 1 alpha-subunit (TEF1) mRNA, complete cds Length = 2062 Score = 69.9 bits (35), Expect = 3e-09 Identities = 41/43 (95%) Strand = Plus / Minus Query: 152 ctcatttcttcttgatcgcagccttggtaaccttggcgccggt 194 |||||||||||||||| ||||||||||| |||||||||||||| Sbjct: 1826 ctcatttcttcttgatggcagccttggtcaccttggcgccggt 1784
>gb|AF479046.1| Triticum aestivum elongation factor-1 alpha mRNA, partial cds Length = 432 Score = 65.9 bits (33), Expect = 4e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 153 tcatttcttcttgatcgcagccttggtaaccttggcgccggtcgg 197 ||||||||||||| |||||||||||| ||||||||||||||||| Sbjct: 432 tcatttcttcttggccgcagccttggtcaccttggcgccggtcgg 388
>dbj|D12709.1|DARELF1A Daucus carota mRNA for elongation factor 1-alpha, complete cds Length = 1700 Score = 60.0 bits (30), Expect = 3e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 153 tcatttcttcttgatcgcagccttggtaaccttggcgccggt 194 ||||||||||||||| ||||||||||| |||||||| ||||| Sbjct: 1377 tcatttcttcttgattgcagccttggtgaccttggctccggt 1336
>gb|AF281361.1| Saccharum officinarum elongation factor mRNA, complete cds Length = 1745 Score = 58.0 bits (29), Expect = 1e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 153 tcatttcttcttgatcgcagccttggtaaccttggcgccggtcgg 197 ||||||||||||| ||||||||||| ||||||||||||||||| Sbjct: 1447 tcatttcttcttggcagcagccttggtcaccttggcgccggtcgg 1403
>emb|Z50789.1|HVEF1ALFA H.vulgare mRNA for elongation factor 1-alpha Length = 1609 Score = 56.0 bits (28), Expect = 4e-05 Identities = 37/40 (92%) Strand = Plus / Minus Query: 155 atttcttcttgatcgcagccttggtaaccttggcgccggt 194 ||||||||||||| ||||||||||| |||||||| ||||| Sbjct: 1398 atttcttcttgatggcagccttggtcaccttggctccggt 1359
>emb|AJ234435.1|HVU234435 Hordeum vulgare partial mRNA; clone cMWG0716.rev Length = 325 Score = 56.0 bits (28), Expect = 4e-05 Identities = 37/40 (92%) Strand = Plus / Plus Query: 155 atttcttcttgatcgcagccttggtaaccttggcgccggt 194 ||||||||||||| ||||||||||| |||||||| ||||| Sbjct: 167 atttcttcttgatggcagccttggtcaccttggctccggt 206
>gb|BT016514.1| Zea mays clone Contig347 mRNA sequence Length = 1687 Score = 52.0 bits (26), Expect = 7e-04 Identities = 38/42 (90%) Strand = Plus / Minus Query: 153 tcatttcttcttgatcgcagccttggtaaccttggcgccggt 194 ||||||||||||| ||||||||||| |||||||||||||| Sbjct: 1424 tcatttcttcttggcagcagccttggtcaccttggcgccggt 1383
>gb|BT018898.1| Zea mays clone EL01T0207D05.d mRNA sequence Length = 1483 Score = 52.0 bits (26), Expect = 7e-04 Identities = 26/26 (100%) Strand = Plus / Minus Query: 172 gccttggtaaccttggcgccggtcgg 197 |||||||||||||||||||||||||| Sbjct: 1366 gccttggtaaccttggcgccggtcgg 1341
>gb|BT016889.1| Zea mays clone Contig722 mRNA sequence Length = 930 Score = 52.0 bits (26), Expect = 7e-04 Identities = 26/26 (100%) Strand = Plus / Plus Query: 172 gccttggtaaccttggcgccggtcgg 197 |||||||||||||||||||||||||| Sbjct: 318 gccttggtaaccttggcgccggtcgg 343
>gb|AF136828.1|AF136828 Zea mays clone f elongation factor 1 alpha mRNA, complete cds Length = 1596 Score = 52.0 bits (26), Expect = 7e-04 Identities = 26/26 (100%) Strand = Plus / Minus Query: 172 gccttggtaaccttggcgccggtcgg 197 |||||||||||||||||||||||||| Sbjct: 1394 gccttggtaaccttggcgccggtcgg 1369
>gb|BT016740.1| Zea mays clone Contig573 mRNA sequence Length = 1712 Score = 50.1 bits (25), Expect = 0.003 Identities = 40/45 (88%) Strand = Plus / Minus Query: 153 tcatttcttcttgatcgcagccttggtaaccttggcgccggtcgg 197 ||||||||||||| ||||||||||| |||||||| |||||||| Sbjct: 1439 tcatttcttcttggcagcagccttggtcaccttggcaccggtcgg 1395
>gb|AF136829.1|AF136829 Zea mays clone g elongation factor 1 alpha mRNA, complete cds Length = 1592 Score = 50.1 bits (25), Expect = 0.003 Identities = 40/45 (88%) Strand = Plus / Minus Query: 153 tcatttcttcttgatcgcagccttggtaaccttggcgccggtcgg 197 ||||||||||||| || |||||||| ||||||||||||||||| Sbjct: 1444 tcatttcttcttggcggccgccttggtcaccttggcgccggtcgg 1400
>gb|AF121261.1|AF121261 Lilium longiflorum elongation factor 1-alpha 1 (EF-1-alpha1) mRNA, complete cds Length = 1700 Score = 50.1 bits (25), Expect = 0.003 Identities = 34/37 (91%) Strand = Plus / Minus Query: 152 ctcatttcttcttgatcgcagccttggtaaccttggc 188 |||| ||||||||||| ||||||||||| |||||||| Sbjct: 1420 ctcacttcttcttgatagcagccttggtcaccttggc 1384
>ref|NM_100666.2| Arabidopsis thaliana calmodulin binding / translation elongation factor AT1G07920 mRNA, complete cds Length = 1782 Score = 48.1 bits (24), Expect = 0.010 Identities = 33/36 (91%) Strand = Plus / Minus Query: 159 cttcttgatcgcagccttggtaaccttggcgccggt 194 |||||||| |||||||||||||||||||| ||||| Sbjct: 1450 cttcttgacggcagccttggtaaccttggctccggt 1415
>gb|BT017771.1| Zea mays clone EL01N0502E05.c mRNA sequence Length = 959 Score = 48.1 bits (24), Expect = 0.010 Identities = 33/36 (91%) Strand = Plus / Minus Query: 153 tcatttcttcttgatcgcagccttggtaaccttggc 188 |||||||||||| || ||||||||||| |||||||| Sbjct: 804 tcatttcttctttattgcagccttggtcaccttggc 769
>emb|X16431.1|ATEF1A23 A.thaliana A2 and A3 genes encoding elongation factor 1-alpha Length = 6022 Score = 48.1 bits (24), Expect = 0.010 Identities = 33/36 (91%) Strand = Plus / Minus Query: 159 cttcttgatcgcagccttggtaaccttggcgccggt 194 |||||||| |||||||||||||||||||| ||||| Sbjct: 1910 cttcttgacggcagccttggtaaccttggctccggt 1875 Score = 44.1 bits (22), Expect = 0.16 Identities = 25/26 (96%) Strand = Plus / Minus Query: 169 gcagccttggtaaccttggcgccggt 194 |||||||||||||||||||| ||||| Sbjct: 5331 gcagccttggtaaccttggctccggt 5306
>dbj|AK221085.1| Arabidopsis thaliana mRNA for elongation factor 1-alpha, complete cds, clone: RAFL22-81-H15 Length = 630 Score = 48.1 bits (24), Expect = 0.010 Identities = 33/36 (91%) Strand = Plus / Minus Query: 159 cttcttgatcgcagccttggtaaccttggcgccggt 194 |||||||| |||||||||||||||||||| ||||| Sbjct: 358 cttcttgacggcagccttggtaaccttggctccggt 323
>emb|BX815663.1|CNS0ABIH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS81ZC04 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 353 Score = 48.1 bits (24), Expect = 0.010 Identities = 33/36 (91%) Strand = Plus / Minus Query: 159 cttcttgatcgcagccttggtaaccttggcgccggt 194 |||||||| |||||||||||||||||||| ||||| Sbjct: 84 cttcttgacggcagccttggtaaccttggctccggt 49
>gb|AY088358.1| Arabidopsis thaliana clone 6135 mRNA, complete sequence Length = 1687 Score = 48.1 bits (24), Expect = 0.010 Identities = 33/36 (91%) Strand = Plus / Minus Query: 159 cttcttgatcgcagccttggtaaccttggcgccggt 194 |||||||| |||||||||||||||||||| ||||| Sbjct: 1419 cttcttgacggcagccttggtaaccttggctccggt 1384
>gb|BT002442.1| Arabidopsis thaliana elongation factor 1-alpha (At1g07940) mRNA, complete cds Length = 1704 Score = 48.1 bits (24), Expect = 0.010 Identities = 33/36 (91%) Strand = Plus / Minus Query: 159 cttcttgatcgcagccttggtaaccttggcgccggt 194 |||||||| |||||||||||||||||||| ||||| Sbjct: 1418 cttcttgacggcagccttggtaaccttggctccggt 1383
>gb|BT002423.1| Arabidopsis thaliana elongation factor 1-alpha (At1g07920) mRNA, complete cds Length = 1664 Score = 48.1 bits (24), Expect = 0.010 Identities = 33/36 (91%) Strand = Plus / Minus Query: 159 cttcttgatcgcagccttggtaaccttggcgccggt 194 |||||||| |||||||||||||||||||| ||||| Sbjct: 1418 cttcttgacggcagccttggtaaccttggctccggt 1383
>gb|AC026875.4|AC026875 Genomic sequence for Arabidopsis thaliana BAC T6D22 from chromosome I, complete sequence Length = 120965 Score = 48.1 bits (24), Expect = 0.010 Identities = 33/36 (91%) Strand = Plus / Minus Query: 159 cttcttgatcgcagccttggtaaccttggcgccggt 194 |||||||| |||||||||||||||||||| ||||| Sbjct: 12884 cttcttgacggcagccttggtaaccttggctccggt 12849 Score = 44.1 bits (22), Expect = 0.16 Identities = 28/30 (93%) Strand = Plus / Plus Query: 159 cttcttgatcgcagccttggtaaccttggc 188 |||||||| |||||||||||||||||||| Sbjct: 19257 cttcttgactgcagccttggtaaccttggc 19286 Score = 44.1 bits (22), Expect = 0.16 Identities = 25/26 (96%) Strand = Plus / Minus Query: 169 gcagccttggtaaccttggcgccggt 194 |||||||||||||||||||| ||||| Sbjct: 16331 gcagccttggtaaccttggctccggt 16306
>gb|AF136826.1|AF136826 Zea mays clone d elongation factor 1 alpha mRNA, complete cds Length = 1546 Score = 48.1 bits (24), Expect = 0.010 Identities = 33/36 (91%) Strand = Plus / Minus Query: 153 tcatttcttcttgatcgcagccttggtaaccttggc 188 |||||||||||| || ||||||||||| |||||||| Sbjct: 1375 tcatttcttctttattgcagccttggtcaccttggc 1340
>dbj|AB073630.1| Suaeda japonica sjef-1A mRNA for eukaryotic elongation factor 1A, complete cds Length = 1857 Score = 48.1 bits (24), Expect = 0.010 Identities = 33/36 (91%) Strand = Plus / Minus Query: 153 tcatttcttcttgatcgcagccttggtaaccttggc 188 |||||||||||| || ||||||||||| |||||||| Sbjct: 1439 tcatttcttcttcatggcagccttggtgaccttggc 1404
>gb|U63815.1|ATU63815 Arabidopsis thaliana AT.I.24-1, AT.I.24-2, AT.I.24-3, AT.I.24-4, AT.I.24-5, AT.I.24-6, AT.I.24-9 and AT.I.24-14 genes, partial cds, AT.I.24-7, ascorbate peroxidase (ATHAPX1), EF-1alpha-A1, -A2 and -A3 (EF-1alpha) and AT.I.24-13 genes, complete cds Length = 63093 Score = 48.1 bits (24), Expect = 0.010 Identities = 33/36 (91%) Strand = Plus / Plus Query: 159 cttcttgatcgcagccttggtaaccttggcgccggt 194 |||||||| |||||||||||||||||||| ||||| Sbjct: 47828 cttcttgacggcagccttggtaaccttggctccggt 47863 Score = 44.1 bits (22), Expect = 0.16 Identities = 25/26 (96%) Strand = Plus / Plus Query: 169 gcagccttggtaaccttggcgccggt 194 |||||||||||||||||||| ||||| Sbjct: 44398 gcagccttggtaaccttggctccggt 44423 Score = 44.1 bits (22), Expect = 0.16 Identities = 28/30 (93%) Strand = Plus / Minus Query: 159 cttcttgatcgcagccttggtaaccttggc 188 |||||||| |||||||||||||||||||| Sbjct: 41467 cttcttgactgcagccttggtaaccttggc 41438
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 46.1 bits (23), Expect = 0.040 Identities = 38/43 (88%) Strand = Plus / Minus Query: 152 ctcatttcttcttgatcgcagccttggtaaccttggcgccggt 194 |||||||||||||| ||||||||||| |||||||| ||||| Sbjct: 4101208 ctcatttcttcttggcggcagccttggtcaccttggcaccggt 4101166 Score = 46.1 bits (23), Expect = 0.040 Identities = 38/43 (88%) Strand = Plus / Minus Query: 152 ctcatttcttcttgatcgcagccttggtaaccttggcgccggt 194 |||||||||||||| ||||||||||| |||||||| ||||| Sbjct: 4078916 ctcatttcttcttggcggcagccttggtcaccttggcaccggt 4078874 Score = 44.1 bits (22), Expect = 0.16 Identities = 37/42 (88%) Strand = Plus / Minus Query: 153 tcatttcttcttgatcgcagccttggtaaccttggcgccggt 194 ||||||||||||| ||||||||||| |||||||| ||||| Sbjct: 4084355 tcatttcttcttggcggcagccttggtcaccttggcaccggt 4084314 Score = 38.2 bits (19), Expect = 9.8 Identities = 37/43 (86%) Strand = Plus / Minus Query: 152 ctcatttcttcttgatcgcagccttggtaaccttggcgccggt 194 |||| ||||||||| ||||||||||| |||||||| ||||| Sbjct: 4095038 ctcacttcttcttggcggcagccttggtcaccttggcaccggt 4094996
>gb|AC090484.4| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0061L19, from chromosome 3, complete sequence Length = 153322 Score = 46.1 bits (23), Expect = 0.040 Identities = 38/43 (88%) Strand = Plus / Plus Query: 152 ctcatttcttcttgatcgcagccttggtaaccttggcgccggt 194 |||||||||||||| ||||||||||| |||||||| ||||| Sbjct: 20452 ctcatttcttcttggcggcagccttggtcaccttggcaccggt 20494 Score = 44.1 bits (22), Expect = 0.16 Identities = 37/42 (88%) Strand = Plus / Plus Query: 153 tcatttcttcttgatcgcagccttggtaaccttggcgccggt 194 ||||||||||||| ||||||||||| |||||||| ||||| Sbjct: 15013 tcatttcttcttggcggcagccttggtcaccttggcaccggt 15054 Score = 38.2 bits (19), Expect = 9.8 Identities = 37/43 (86%) Strand = Plus / Plus Query: 152 ctcatttcttcttgatcgcagccttggtaaccttggcgccggt 194 |||| ||||||||| ||||||||||| |||||||| ||||| Sbjct: 4330 ctcacttcttcttggcggcagccttggtcaccttggcaccggt 4372
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 46.1 bits (23), Expect = 0.040 Identities = 38/43 (88%) Strand = Plus / Minus Query: 152 ctcatttcttcttgatcgcagccttggtaaccttggcgccggt 194 |||||||||||||| ||||||||||| |||||||| ||||| Sbjct: 4101317 ctcatttcttcttggcggcagccttggtcaccttggcaccggt 4101275 Score = 46.1 bits (23), Expect = 0.040 Identities = 38/43 (88%) Strand = Plus / Minus Query: 152 ctcatttcttcttgatcgcagccttggtaaccttggcgccggt 194 |||||||||||||| ||||||||||| |||||||| ||||| Sbjct: 4079027 ctcatttcttcttggcggcagccttggtcaccttggcaccggt 4078985 Score = 44.1 bits (22), Expect = 0.16 Identities = 37/42 (88%) Strand = Plus / Minus Query: 153 tcatttcttcttgatcgcagccttggtaaccttggcgccggt 194 ||||||||||||| ||||||||||| |||||||| ||||| Sbjct: 4084466 tcatttcttcttggcggcagccttggtcaccttggcaccggt 4084425 Score = 38.2 bits (19), Expect = 9.8 Identities = 37/43 (86%) Strand = Plus / Minus Query: 152 ctcatttcttcttgatcgcagccttggtaaccttggcgccggt 194 |||| ||||||||| ||||||||||| |||||||| ||||| Sbjct: 4095149 ctcacttcttcttggcggcagccttggtcaccttggcaccggt 4095107
>gb|AC125472.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0050H14, complete sequence Length = 142245 Score = 46.1 bits (23), Expect = 0.040 Identities = 38/43 (88%) Strand = Plus / Minus Query: 152 ctcatttcttcttgatcgcagccttggtaaccttggcgccggt 194 |||||||||||||| ||||||||||| |||||||| ||||| Sbjct: 1845 ctcatttcttcttggcggcagccttggtcaccttggcaccggt 1803
>dbj|AK105030.2| Oryza sativa (japonica cultivar-group) cDNA clone:001-012-F06, full insert sequence Length = 1632 Score = 46.1 bits (23), Expect = 0.040 Identities = 38/43 (88%) Strand = Plus / Minus Query: 152 ctcatttcttcttgatcgcagccttggtaaccttggcgccggt 194 |||||||||||||| ||||||||||| |||||||| ||||| Sbjct: 1440 ctcatttcttcttggcggcagccttggtcaccttggcaccggt 1398
>dbj|AK119172.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-A11, full insert sequence Length = 1661 Score = 46.1 bits (23), Expect = 0.040 Identities = 38/43 (88%) Strand = Plus / Minus Query: 152 ctcatttcttcttgatcgcagccttggtaaccttggcgccggt 194 |||||||||||||| ||||||||||| |||||||| ||||| Sbjct: 1435 ctcatttcttcttggcggcagccttggtcaccttggcaccggt 1393
>dbj|AK103738.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033138K07, full insert sequence Length = 3222 Score = 46.1 bits (23), Expect = 0.040 Identities = 38/43 (88%) Strand = Plus / Minus Query: 152 ctcatttcttcttgatcgcagccttggtaaccttggcgccggt 194 |||||||||||||| ||||||||||| |||||||| ||||| Sbjct: 3030 ctcatttcttcttggcggcagccttggtcaccttggcaccggt 2988
>dbj|AK073196.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033024M04, full insert sequence Length = 2157 Score = 46.1 bits (23), Expect = 0.040 Identities = 38/43 (88%) Strand = Plus / Minus Query: 152 ctcatttcttcttgatcgcagccttggtaaccttggcgccggt 194 |||||||||||||| ||||||||||| |||||||| ||||| Sbjct: 2001 ctcatttcttcttggcggcagccttggtcaccttggcaccggt 1959
>dbj|AK072648.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023126K23, full insert sequence Length = 1760 Score = 46.1 bits (23), Expect = 0.040 Identities = 38/43 (88%) Strand = Plus / Minus Query: 152 ctcatttcttcttgatcgcagccttggtaaccttggcgccggt 194 |||||||||||||| ||||||||||| |||||||| ||||| Sbjct: 1439 ctcatttcttcttggcggcagccttggtcaccttggcaccggt 1397
>dbj|AK072285.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023016F09, full insert sequence Length = 1653 Score = 46.1 bits (23), Expect = 0.040 Identities = 38/43 (88%) Strand = Plus / Minus Query: 152 ctcatttcttcttgatcgcagccttggtaaccttggcgccggt 194 |||||||||||||| ||||||||||| |||||||| ||||| Sbjct: 1428 ctcatttcttcttggcggcagccttggtcaccttggcaccggt 1386
>dbj|AK062030.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-G10, full insert sequence Length = 1357 Score = 46.1 bits (23), Expect = 0.040 Identities = 38/43 (88%) Strand = Plus / Minus Query: 152 ctcatttcttcttgatcgcagccttggtaaccttggcgccggt 194 |||||||||||||| ||||||||||| |||||||| ||||| Sbjct: 1161 ctcatttcttcttggcggcagccttggtcaccttggcaccggt 1119
>gb|AF030517.1|AF030517 Oryza sativa translation elongation factor-1 alpha mRNA, complete cds Length = 1562 Score = 46.1 bits (23), Expect = 0.040 Identities = 38/43 (88%) Strand = Plus / Minus Query: 152 ctcatttcttcttgatcgcagccttggtaaccttggcgccggt 194 |||||||||||||| ||||||||||| |||||||| ||||| Sbjct: 1345 ctcatttcttcttgcgggcagccttggtcaccttggcaccggt 1303
>dbj|D63581.1| Oryza sativa mRNA for EF-1 alpha, complete cds Length = 1630 Score = 46.1 bits (23), Expect = 0.040 Identities = 38/43 (88%) Strand = Plus / Minus Query: 152 ctcatttcttcttgatcgcagccttggtaaccttggcgccggt 194 |||||||||||||| ||||||||||| |||||||| ||||| Sbjct: 1406 ctcatttcttcttggcggcagccttggtcaccttggcaccggt 1364
>dbj|D63580.1| Oryza sativa mRNA for EF-1 alpha, complete cds Length = 1644 Score = 46.1 bits (23), Expect = 0.040 Identities = 38/43 (88%) Strand = Plus / Minus Query: 152 ctcatttcttcttgatcgcagccttggtaaccttggcgccggt 194 |||||||||||||| ||||||||||| |||||||| ||||| Sbjct: 1418 ctcatttcttcttggcggcagccttggtcaccttggcaccggt 1376
>ref|NM_100667.2| Arabidopsis thaliana calmodulin binding / translation elongation factor AT1G07930 mRNA, complete cds Length = 1778 Score = 44.1 bits (22), Expect = 0.16 Identities = 25/26 (96%) Strand = Plus / Minus Query: 169 gcagccttggtaaccttggcgccggt 194 |||||||||||||||||||| ||||| Sbjct: 1424 gcagccttggtaaccttggctccggt 1399
>ref|NM_001035916.1| Arabidopsis thaliana calmodulin binding / translation elongation factor AT1G07940 transcript variant AT1G07940.2 mRNA, complete cds Length = 1990 Score = 44.1 bits (22), Expect = 0.16 Identities = 28/30 (93%) Strand = Plus / Minus Query: 159 cttcttgatcgcagccttggtaaccttggc 188 |||||||| |||||||||||||||||||| Sbjct: 1581 cttcttgactgcagccttggtaaccttggc 1552
>ref|NM_100668.2| Arabidopsis thaliana calmodulin binding / translation elongation factor AT1G07940 transcript variant AT1G07940.1 mRNA, complete cds Length = 1864 Score = 44.1 bits (22), Expect = 0.16 Identities = 28/30 (93%) Strand = Plus / Minus Query: 159 cttcttgatcgcagccttggtaaccttggc 188 |||||||| |||||||||||||||||||| Sbjct: 1455 cttcttgactgcagccttggtaaccttggc 1426
>gb|BT016525.1| Zea mays clone Contig358 mRNA sequence Length = 1705 Score = 44.1 bits (22), Expect = 0.16 Identities = 37/42 (88%) Strand = Plus / Minus Query: 153 tcatttcttcttgatcgcagccttggtaaccttggcgccggt 194 ||||||||||||| || |||||||| |||||||||||||| Sbjct: 1423 tcatttcttcttggcggccgccttggtcaccttggcgccggt 1382
>gb|BT000595.1| Arabidopsis thaliana elongation factor 1-alpha (At1g07940/T6D22_14) mRNA, complete cds Length = 1350 Score = 44.1 bits (22), Expect = 0.16 Identities = 28/30 (93%) Strand = Plus / Minus Query: 159 cttcttgatcgcagccttggtaaccttggc 188 |||||||| |||||||||||||||||||| Sbjct: 1338 cttcttgactgcagccttggtaaccttggc 1309
>gb|AY123029.1| Arabidopsis thaliana putative elongation factor 1-alpha (At1g07930) mRNA, complete cds Length = 1381 Score = 44.1 bits (22), Expect = 0.16 Identities = 25/26 (96%) Strand = Plus / Minus Query: 169 gcagccttggtaaccttggcgccggt 194 |||||||||||||||||||| ||||| Sbjct: 1328 gcagccttggtaaccttggctccggt 1303
>emb|X16430.1|ATEF1AA1 Arabidopsis thaliana EF-1 alpha A1 gene for elongation factor 1-alpha Length = 3230 Score = 44.1 bits (22), Expect = 0.16 Identities = 28/30 (93%) Strand = Plus / Minus Query: 159 cttcttgatcgcagccttggtaaccttggc 188 |||||||| |||||||||||||||||||| Sbjct: 2589 cttcttgactgcagccttggtaaccttggc 2560
>gb|AY080660.1| Arabidopsis thaliana putative elongation factor 1-alpha (At1g07930) mRNA, complete cds Length = 1705 Score = 44.1 bits (22), Expect = 0.16 Identities = 25/26 (96%) Strand = Plus / Minus Query: 169 gcagccttggtaaccttggcgccggt 194 |||||||||||||||||||| ||||| Sbjct: 1420 gcagccttggtaaccttggctccggt 1395
>gb|AY114651.1| Arabidopsis thaliana putative elongation factor 1-a (At1g07920) mRNA, complete cds Length = 1463 Score = 44.1 bits (22), Expect = 0.16 Identities = 25/26 (96%) Strand = Plus / Minus Query: 169 gcagccttggtaaccttggcgccggt 194 |||||||||||||||||||| ||||| Sbjct: 1328 gcagccttggtaaccttggctccggt 1303
>gb|AF361822.1| Arabidopsis thaliana At1g07930/T6D22_3 mRNA, complete cds Length = 1679 Score = 44.1 bits (22), Expect = 0.16 Identities = 25/26 (96%) Strand = Plus / Minus Query: 169 gcagccttggtaaccttggcgccggt 194 |||||||||||||||||||| ||||| Sbjct: 1420 gcagccttggtaaccttggctccggt 1395
>gb|AY065008.1| Arabidopsis thaliana At1g07930/T6D22_3 mRNA, complete cds Length = 1657 Score = 44.1 bits (22), Expect = 0.16 Identities = 25/26 (96%) Strand = Plus / Minus Query: 169 gcagccttggtaaccttggcgccggt 194 |||||||||||||||||||| ||||| Sbjct: 1420 gcagccttggtaaccttggctccggt 1395
>gb|AY062553.1| Arabidopsis thaliana putative elongation factor 1-a (At1g07920; T6D22.2) mRNA, complete cds Length = 1778 Score = 44.1 bits (22), Expect = 0.16 Identities = 25/26 (96%) Strand = Plus / Minus Query: 169 gcagccttggtaaccttggcgccggt 194 |||||||||||||||||||| ||||| Sbjct: 1424 gcagccttggtaaccttggctccggt 1399
>gb|AY059160.1| Arabidopsis thaliana At1g07930/T6D22_3 mRNA, complete cds Length = 1350 Score = 44.1 bits (22), Expect = 0.16 Identities = 25/26 (96%) Strand = Plus / Minus Query: 169 gcagccttggtaaccttggcgccggt 194 |||||||||||||||||||| ||||| Sbjct: 1328 gcagccttggtaaccttggctccggt 1303
>dbj|AK221032.1| Arabidopsis thaliana mRNA for elongation factor 1-alpha, partial cds, clone: RAFL22-71-O21 Length = 599 Score = 44.1 bits (22), Expect = 0.16 Identities = 28/30 (93%) Strand = Plus / Minus Query: 159 cttcttgatcgcagccttggtaaccttggc 188 |||||||| |||||||||||||||||||| Sbjct: 273 cttcttgactgcagccttggtaaccttggc 244
>gb|AY048275.1| Arabidopsis thaliana At1g07930/T6D22_3 mRNA, complete cds Length = 1682 Score = 44.1 bits (22), Expect = 0.16 Identities = 25/26 (96%) Strand = Plus / Minus Query: 169 gcagccttggtaaccttggcgccggt 194 |||||||||||||||||||| ||||| Sbjct: 1414 gcagccttggtaaccttggctccggt 1389
>gb|AY039583.1| Arabidopsis thaliana At1g07940/T6D22_14 mRNA, complete cds Length = 1650 Score = 44.1 bits (22), Expect = 0.16 Identities = 28/30 (93%) Strand = Plus / Minus Query: 159 cttcttgatcgcagccttggtaaccttggc 188 |||||||| |||||||||||||||||||| Sbjct: 1410 cttcttgactgcagccttggtaaccttggc 1381
>emb|BX814695.1|CNS0ADQC Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB8ZA02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1593 Score = 44.1 bits (22), Expect = 0.16 Identities = 28/30 (93%) Strand = Plus / Minus Query: 159 cttcttgatcgcagccttggtaaccttggc 188 |||||||| |||||||||||||||||||| Sbjct: 1359 cttcttgactgcagccttggtaaccttggc 1330
>gb|BT003325.1| Arabidopsis thaliana Unknown protein mRNA, complete cds Length = 1677 Score = 44.1 bits (22), Expect = 0.16 Identities = 25/26 (96%) Strand = Plus / Minus Query: 169 gcagccttggtaaccttggcgccggt 194 |||||||||||||||||||| ||||| Sbjct: 1420 gcagccttggtaaccttggctccggt 1395
>gb|AY946009.1| Actinidia deliciosa elongation factor 1 alpha mRNA, complete cds Length = 1738 Score = 44.1 bits (22), Expect = 0.16 Identities = 40/46 (86%) Strand = Plus / Minus Query: 152 ctcatttcttcttgatcgcagccttggtaaccttggcgccggtcgg 197 |||| |||||||| | ||||||||||| |||||||| |||||||| Sbjct: 1442 ctcacttcttcttcagagcagccttggtgaccttggcaccggtcgg 1397
>gb|AF136827.1|AF136827 Zea mays clone e elongation factor 1 alpha mRNA, complete cds Length = 1606 Score = 44.1 bits (22), Expect = 0.16 Identities = 37/42 (88%) Strand = Plus / Minus Query: 153 tcatttcttcttgatcgcagccttggtaaccttggcgccggt 194 ||||||||||||| || |||||||| |||||||||||||| Sbjct: 1432 tcatttcttcttggcggccgccttggtcaccttggcgccggt 1391
>gb|AF136824.1|AF136824 Zea mays clone b elongation factor 1 alpha mRNA, complete cds Length = 1604 Score = 44.1 bits (22), Expect = 0.16 Identities = 37/42 (88%) Strand = Plus / Minus Query: 153 tcatttcttcttgatcgcagccttggtaaccttggcgccggt 194 ||||||||||||| || |||||||| |||||||||||||| Sbjct: 1404 tcatttcttcttggcggccgccttggtcaccttggcgccggt 1363
>gb|AF136823.1|AF136823 Zea mays clone a elongation factor 1 alpha mRNA, complete cds Length = 1600 Score = 44.1 bits (22), Expect = 0.16 Identities = 37/42 (88%) Strand = Plus / Minus Query: 153 tcatttcttcttgatcgcagccttggtaaccttggcgccggt 194 ||||||||||||| || |||||||| |||||||||||||| Sbjct: 1415 tcatttcttcttggcggccgccttggtcaccttggcgccggt 1374
>dbj|AK119537.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-B11, full insert sequence Length = 1722 Score = 44.1 bits (22), Expect = 0.16 Identities = 37/42 (88%) Strand = Plus / Minus Query: 153 tcatttcttcttgatcgcagccttggtaaccttggcgccggt 194 ||||||||||||| ||||||||||| |||||||| ||||| Sbjct: 1441 tcatttcttcttggcggcagccttggtcaccttggcaccggt 1400
>dbj|AK061464.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-C01, full insert sequence Length = 1620 Score = 44.1 bits (22), Expect = 0.16 Identities = 37/42 (88%) Strand = Plus / Minus Query: 153 tcatttcttcttgatcgcagccttggtaaccttggcgccggt 194 ||||||||||||| ||||||||||| |||||||| ||||| Sbjct: 1440 tcatttcttcttggcggcagccttggtcaccttggcaccggt 1399
>gb|AY109326.1| Zea mays CL1256_1 mRNA sequence Length = 2360 Score = 44.1 bits (22), Expect = 0.16 Identities = 37/42 (88%) Strand = Plus / Minus Query: 153 tcatttcttcttgatcgcagccttggtaaccttggcgccggt 194 ||||||||||||| || |||||||| |||||||||||||| Sbjct: 2032 tcatttcttcttggcggccgccttggtcaccttggcgccggt 1991
>gb|AF067195.1|AF067195 Oryza sativa translation elongation factor mRNA, partial cds Length = 269 Score = 44.1 bits (22), Expect = 0.16 Identities = 37/42 (88%) Strand = Plus / Minus Query: 153 tcatttcttcttgatcgcagccttggtaaccttggcgccggt 194 ||||||||||||| ||||||||||| |||||||| ||||| Sbjct: 49 tcatttcttcttggcggcagccttggtcaccttggcaccggt 8
>dbj|D63583.1| Oryza sativa mRNA for EF-1 alpha, complete cds Length = 1599 Score = 44.1 bits (22), Expect = 0.16 Identities = 37/42 (88%) Strand = Plus / Minus Query: 153 tcatttcttcttgatcgcagccttggtaaccttggcgccggt 194 ||||||||||||| ||||||||||| |||||||| ||||| Sbjct: 1419 tcatttcttcttggcggcagccttggtcaccttggcaccggt 1378
>gb|CP000323.1| Psychrobacter cryohalolentis K5, complete genome Length = 3059876 Score = 42.1 bits (21), Expect = 0.63 Identities = 28/29 (96%), Gaps = 1/29 (3%) Strand = Plus / Minus Query: 94 cgccaccaccaaacaccgccaccgccacc 122 ||||||||||||| ||||||||||||||| Sbjct: 559501 cgccaccaccaaa-accgccaccgccacc 559474
>gb|AC118555.2| Homo sapiens chromosome 1 clone RP11-83A16, complete sequence Length = 47196 Score = 42.1 bits (21), Expect = 0.63 Identities = 21/21 (100%) Strand = Plus / Minus Query: 50 aaacacttctcgacacaaata 70 ||||||||||||||||||||| Sbjct: 21231 aaacacttctcgacacaaata 21211
>gb|AF331850.1| Saccharum hybrid cultivar CP72-2086 elongation factor 1 alpha (SEF1a) mRNA, partial cds Length = 1578 Score = 42.1 bits (21), Expect = 0.63 Identities = 33/37 (89%) Strand = Plus / Minus Query: 152 ctcatttcttcttgatcgcagccttggtaaccttggc 188 |||||||||||||| ||||||||||| |||||||| Sbjct: 1327 ctcatttcttcttggcggcagccttggtcaccttggc 1291
>gb|AF331849.1| Saccharum hybrid cultivar CP65-357 elongation factor 1 alpha (SEF1a) gene, complete cds Length = 4537 Score = 42.1 bits (21), Expect = 0.63 Identities = 33/37 (89%) Strand = Plus / Minus Query: 152 ctcatttcttcttgatcgcagccttggtaaccttggc 188 |||||||||||||| ||||||||||| |||||||| Sbjct: 4090 ctcatttcttcttggcggcagccttggtcaccttggc 4054
>dbj|AK058026.1| Homo sapiens cDNA FLJ25297 fis, clone STM07657 Length = 1890 Score = 42.1 bits (21), Expect = 0.63 Identities = 21/21 (100%) Strand = Plus / Minus Query: 50 aaacacttctcgacacaaata 70 ||||||||||||||||||||| Sbjct: 73 aaacacttctcgacacaaata 53
>gb|AC153558.7| Mus musculus 10 BAC RP23-367D2 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 207823 Score = 40.1 bits (20), Expect = 2.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 30 accagtgctttaagcagttcaaac 53 |||| ||||||||||||||||||| Sbjct: 74806 accactgctttaagcagttcaaac 74829
>ref|XM_361284.1| Magnaporthe grisea 70-15 hypothetical protein (MG03758.4) partial mRNA Length = 852 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 107 caccgccaccgccaccatag 126 |||||||||||||||||||| Sbjct: 820 caccgccaccgccaccatag 801
>gb|AC068663.5| Mus musculus strain C57BL6/J chromosome 5 clone RP23-280D18, complete sequence Length = 221134 Score = 40.1 bits (20), Expect = 2.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 96 ccaccaccaaacaccgccaccgccacca 123 ||||||||||||||| ||||| |||||| Sbjct: 150093 ccaccaccaaacaccaccaccaccacca 150120
>gb|AC113541.10| Mus musculus chromosome 5, clone RP23-185N2, complete sequence Length = 210222 Score = 40.1 bits (20), Expect = 2.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 96 ccaccaccaaacaccgccaccgccacca 123 ||||||||||||||| ||||| |||||| Sbjct: 47285 ccaccaccaaacaccaccaccaccacca 47258
>emb|BX065733.1|CNS09MVT Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC49DA03 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 748 Score = 40.1 bits (20), Expect = 2.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 caccaccaaacaccgccacc 116 |||||||||||||||||||| Sbjct: 559 caccaccaaacaccgccacc 540
>emb|BX039974.1|CNS0930A Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC10CB04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 689 Score = 40.1 bits (20), Expect = 2.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 96 ccaccaccaaacaccgccaccgccacca 123 ||||||||||||||| |||||| ||||| Sbjct: 280 ccaccaccaaacaccaccaccgacacca 307
>emb|BX039973.1|CNS09309 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC10CB04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 938 Score = 40.1 bits (20), Expect = 2.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 96 ccaccaccaaacaccgccaccgccacca 123 ||||||||||||||| |||||| ||||| Sbjct: 602 ccaccaccaaacaccaccaccgacacca 575
>gb|AY039764.1| Sinapis arvensis elongation factor-1 alpha mRNA, partial cds Length = 523 Score = 40.1 bits (20), Expect = 2.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 159 cttcttgatcgcagccttggtaaccttggcgccggt 194 |||||||| ||||||||||| |||||||| ||||| Sbjct: 258 cttcttgacggcagccttggtcaccttggctccggt 223
>gb|AY157315.1| Stevia rebaudiana elongation factor 1 alpha mRNA, complete cds Length = 1544 Score = 40.1 bits (20), Expect = 2.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 159 cttcttgatcgcagccttggtaaccttggcgccggt 194 |||||||| ||||||||||| |||||||| ||||| Sbjct: 1370 cttcttgacagcagccttggtcaccttggctccggt 1335
>gb|AF181492.1|AF181492 Lilium longiflorum elongation factor-1 alpha 3 mRNA, complete cds Length = 1686 Score = 40.1 bits (20), Expect = 2.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 153 tcatttcttcttgatcgcagccttggtaaccttggc 188 |||||||||||| | |||| ||||||||||||||| Sbjct: 1383 tcatttcttcttcacagcagacttggtaaccttggc 1348
>gb|AC153561.5| Mus musculus 10 BAC RP23-426E11 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 228734 Score = 40.1 bits (20), Expect = 2.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 30 accagtgctttaagcagttcaaac 53 |||| ||||||||||||||||||| Sbjct: 223453 accactgctttaagcagttcaaac 223476
>ref|NM_113179.3| Arabidopsis thaliana protein binding / structural constituent of cell wall AT3G22800 mRNA, complete cds Length = 1669 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 107 caccgccaccgccaccata 125 ||||||||||||||||||| Sbjct: 1358 caccgccaccgccaccata 1376
>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome Length = 3730232 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 180 aaccttggcgccggtcggc 198 ||||||||||||||||||| Sbjct: 3384391 aaccttggcgccggtcggc 3384373
>ref|XM_479879.1| Oryza sativa (japonica cultivar-group), mRNA Length = 363 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 104 aaacaccgccaccgccacc 122 ||||||||||||||||||| Sbjct: 153 aaacaccgccaccgccacc 171
>gb|AC159313.3| Mus musculus BAC clone RP23-99D11 from chromosome 9, complete sequence Length = 228299 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 127 ttgtggtaaagaacctgac 145 ||||||||||||||||||| Sbjct: 135175 ttgtggtaaagaacctgac 135193
>gb|AC101784.7| Mus musculus chromosome 7, clone RP24-136D20, complete sequence Length = 169423 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 129 gtggtaaagaacctgacac 147 ||||||||||||||||||| Sbjct: 42784 gtggtaaagaacctgacac 42802
>gb|AC120164.7| Mus musculus chromosome 19, clone RP24-470C3, complete sequence Length = 164107 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 107 caccgccaccgccaccata 125 ||||||||||||||||||| Sbjct: 14433 caccgccaccgccaccata 14451
>gb|AY558567.1| Saccharomyces cerevisiae clone FLH000958.01X YBR187W gene, complete cds Length = 843 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 159 cttcttgatcgcagccttg 177 ||||||||||||||||||| Sbjct: 174 cttcttgatcgcagccttg 192
>emb|Z54249.1|PCREP1MR P.clarkii mRNA; repeat region (ID 1MR) Length = 259 Score = 38.2 bits (19), Expect = 9.8 Identities = 22/23 (95%) Strand = Plus / Plus Query: 94 cgccaccaccaaacaccgccacc 116 |||||||||| |||||||||||| Sbjct: 85 cgccaccacccaacaccgccacc 107
>gb|AC136717.10| Mus musculus chromosome 7, clone RP23-48C24, complete sequence Length = 222854 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 105 aacaccgccaccgccacca 123 ||||||||||||||||||| Sbjct: 28939 aacaccgccaccgccacca 28957
>gb|AC108435.5| Mus musculus chromosome 7, clone RP23-229O20, complete sequence Length = 203281 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 105 aacaccgccaccgccacca 123 ||||||||||||||||||| Sbjct: 151549 aacaccgccaccgccacca 151567
>gb|BT023818.1| Drosophila melanogaster SD18573 full insert cDNA Length = 7203 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 105 aacaccgccaccgccacca 123 ||||||||||||||||||| Sbjct: 1426 aacaccgccaccgccacca 1408
>emb|X60302.1|DCEF1A D.carota gene for elongation factor 1A Length = 1785 Score = 38.2 bits (19), Expect = 9.8 Identities = 22/23 (95%) Strand = Plus / Minus Query: 169 gcagccttggtaaccttggcgcc 191 ||||||||||| ||||||||||| Sbjct: 1539 gcagccttggtgaccttggcgcc 1517
>gb|AC090465.15| Homo sapiens chromosome 18, clone RP11-527C6, complete sequence Length = 174535 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 42 agcagttcaaacacttctc 60 ||||||||||||||||||| Sbjct: 112092 agcagttcaaacacttctc 112074
>ref|NM_176542.1| Drosophila melanogaster CG7029-RA (CG7029), mRNA Length = 5604 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 105 aacaccgccaccgccacca 123 ||||||||||||||||||| Sbjct: 1809 aacaccgccaccgccacca 1791
>ref|NM_167371.1| Drosophila melanogaster CG32635-RA (CG32635), mRNA Length = 3363 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 105 aacaccgccaccgccacca 123 ||||||||||||||||||| Sbjct: 2549 aacaccgccaccgccacca 2567
>dbj|AK149733.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:G530014A11 product:unclassifiable, full insert sequence Length = 3312 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 127 ttgtggtaaagaacctgac 145 ||||||||||||||||||| Sbjct: 1578 ttgtggtaaagaacctgac 1596
>gb|AY070839.1| Drosophila melanogaster GH11189 full length cDNA Length = 3283 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 105 aacaccgccaccgccacca 123 ||||||||||||||||||| Sbjct: 2453 aacaccgccaccgccacca 2471
>gb|AC012410.10| Homo sapiens chromosome 8, clone RP11-354A3, complete sequence Length = 220715 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 97 caccaccaaacaccgccac 115 ||||||||||||||||||| Sbjct: 179115 caccaccaaacaccgccac 179133
>gb|AC099310.1| Drosophila melanogaster, chromosome 3R, region 94D-94D, BAC clone BACR05G05, complete sequence Length = 163979 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 105 aacaccgccaccgccacca 123 ||||||||||||||||||| Sbjct: 129487 aacaccgccaccgccacca 129505
>emb|BX323857.16| Mouse DNA sequence from clone RP23-12C2 on chromosome 4, complete sequence Length = 104942 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 105 aacaccgccaccgccacca 123 ||||||||||||||||||| Sbjct: 57325 aacaccgccaccgccacca 57343
>gb|AC016080.5|AC016080 Homo sapiens, clone RP11-23N14, complete sequence Length = 176921 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 97 caccaccaaacaccgccac 115 ||||||||||||||||||| Sbjct: 20649 caccaccaaacaccgccac 20631
>gb|AC010843.10|AC010843 Drosophila melanogaster, chromosome X, region 12A-12A, BAC clone BACR08A22, complete sequence Length = 170914 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 105 aacaccgccaccgccacca 123 ||||||||||||||||||| Sbjct: 108545 aacaccgccaccgccacca 108563
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 38.2 bits (19), Expect = 9.8 Identities = 22/23 (95%) Strand = Plus / Minus Query: 95 gccaccaccaaacaccgccaccg 117 ||||||||||| ||||||||||| Sbjct: 18566407 gccaccaccaaccaccgccaccg 18566385
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 104 aaacaccgccaccgccacc 122 ||||||||||||||||||| Sbjct: 1438739 aaacaccgccaccgccacc 1438757
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 104 aaacaccgccaccgccacc 122 ||||||||||||||||||| Sbjct: 6268385 aaacaccgccaccgccacc 6268403
>gb|AC010995.11|AC010995 Drosophila melanogaster, chromosome X, region 12A-12A, BAC clone BACR30C16, complete sequence Length = 185810 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 105 aacaccgccaccgccacca 123 ||||||||||||||||||| Sbjct: 10883 aacaccgccaccgccacca 10901
>gb|AY939844.1| Cyanophage P-SSM2, complete genome Length = 252401 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 107 caccgccaccgccaccata 125 ||||||||||||||||||| Sbjct: 112520 caccgccaccgccaccata 112502 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 107 caccgccaccgccaccata 125 ||||||||||||||||||| Sbjct: 39577 caccgccaccgccaccata 39559
>emb|BX824256.1|CNS0A7QT Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH34ZA06 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1579 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 107 caccgccaccgccaccata 125 ||||||||||||||||||| Sbjct: 1356 caccgccaccgccaccata 1374
>gb|AC009846.9|AC009846 Drosophila melanogaster, chromosome 3R, region 94C-94D, BAC clone BACR23F10, complete sequence Length = 164038 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 105 aacaccgccaccgccacca 123 ||||||||||||||||||| Sbjct: 155359 aacaccgccaccgccacca 155341
>dbj|AP004727.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0516A04 Length = 145107 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 104 aaacaccgccaccgccacc 122 ||||||||||||||||||| Sbjct: 62461 aaacaccgccaccgccacc 62479
>dbj|AB022223.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MWI23 Length = 77273 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 107 caccgccaccgccaccata 125 ||||||||||||||||||| Sbjct: 52413 caccgccaccgccaccata 52395
>dbj|AP004166.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1499_A07 Length = 132146 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 104 aaacaccgccaccgccacc 122 ||||||||||||||||||| Sbjct: 48644 aaacaccgccaccgccacc 48662
>dbj|AK119528.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-C04, full insert sequence Length = 1818 Score = 38.2 bits (19), Expect = 9.8 Identities = 37/43 (86%) Strand = Plus / Minus Query: 152 ctcatttcttcttgatcgcagccttggtaaccttggcgccggt 194 |||| ||||||||| ||||||||||| |||||||| ||||| Sbjct: 1431 ctcacttcttcttggcggcagccttggtcaccttggcaccggt 1389
>dbj|AK119194.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-C03, full insert sequence Length = 1130 Score = 38.2 bits (19), Expect = 9.8 Identities = 37/43 (86%) Strand = Plus / Minus Query: 152 ctcatttcttcttgatcgcagccttggtaaccttggcgccggt 194 |||| ||||||||| ||||||||||| |||||||| ||||| Sbjct: 900 ctcacttcttcttggcggcagccttggtcaccttggcaccggt 858
>dbj|AK071619.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023100M05, full insert sequence Length = 1867 Score = 38.2 bits (19), Expect = 9.8 Identities = 37/43 (86%) Strand = Plus / Minus Query: 152 ctcatttcttcttgatcgcagccttggtaaccttggcgccggt 194 |||| ||||||||| ||||||||||| |||||||| ||||| Sbjct: 1706 ctcacttcttcttggcggcagccttggtcaccttggcaccggt 1664
>dbj|AK071343.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023091A02, full insert sequence Length = 1658 Score = 38.2 bits (19), Expect = 9.8 Identities = 37/43 (86%) Strand = Plus / Minus Query: 152 ctcatttcttcttgatcgcagccttggtaaccttggcgccggt 194 |||| ||||||||| ||||||||||| |||||||| ||||| Sbjct: 1431 ctcacttcttcttggcggcagccttggtcaccttggcaccggt 1389
>gb|AC148877.2| Chlamydomonas reinhardtii clone cr-11B1, complete sequence Length = 52591 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 105 aacaccgccaccgccacca 123 ||||||||||||||||||| Sbjct: 30924 aacaccgccaccgccacca 30906
>emb|Z36056.1|SCYBR187W S.cerevisiae chromosome II reading frame ORF YBR187w Length = 1527 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 159 cttcttgatcgcagccttg 177 ||||||||||||||||||| Sbjct: 647 cttcttgatcgcagccttg 665
>gb|AE003740.3| Drosophila melanogaster chromosome 3R, section 78 of 118 of the complete sequence Length = 234378 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 105 aacaccgccaccgccacca 123 ||||||||||||||||||| Sbjct: 142010 aacaccgccaccgccacca 141992
>gb|AE003492.3| Drosophila melanogaster chromosome X, section 44 of 74 of the complete sequence Length = 296756 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 105 aacaccgccaccgccacca 123 ||||||||||||||||||| Sbjct: 260286 aacaccgccaccgccacca 260304
>gb|AC119234.10| Mus musculus chromosome 19, clone RP24-211P24, complete sequence Length = 143832 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Minus Query: 107 caccgccaccgccaccata 125 ||||||||||||||||||| Sbjct: 34549 caccgccaccgccaccata 34531
>gb|DQ307159.1| Glossina morsitans morsitans clone TC2031 gram negative binding protein 1-like protein mRNA, complete cds Length = 2659 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 106 acaccgccaccgccaccat 124 ||||||||||||||||||| Sbjct: 654 acaccgccaccgccaccat 672
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 38.2 bits (19), Expect = 9.8 Identities = 22/23 (95%) Strand = Plus / Minus Query: 95 gccaccaccaaacaccgccaccg 117 ||||||||||| ||||||||||| Sbjct: 18492633 gccaccaccaaccaccgccaccg 18492611
>emb|AL935067.2|CNS08CCJ Oryza sativa chromosome 12, . BAC OSJNBa0072A13 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 130954 Score = 38.2 bits (19), Expect = 9.8 Identities = 22/23 (95%) Strand = Plus / Plus Query: 95 gccaccaccaaacaccgccaccg 117 ||||||||||| ||||||||||| Sbjct: 28883 gccaccaccaaccaccgccaccg 28905
>gb|U02073.1|SCCIIMJB Saccharomyces cerevisiae alphaS288C ribosomal protein (SUP46 and URP1) genes, complete cds Length = 12800 Score = 38.2 bits (19), Expect = 9.8 Identities = 19/19 (100%) Strand = Plus / Plus Query: 159 cttcttgatcgcagccttg 177 ||||||||||||||||||| Sbjct: 8435 cttcttgatcgcagccttg 8453
>dbj|AP006692.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT06K23, TM0391, complete sequence Length = 98505 Score = 38.2 bits (19), Expect = 9.8 Identities = 38/43 (88%), Gaps = 1/43 (2%) Strand = Plus / Minus Query: 84 aaacaactatcgccaccaccaaaca-ccgccaccgccaccata 125 ||||||| | |||| |||||||||| || |||||||||||||| Sbjct: 60094 aaacaacaaccgccgccaccaaacaaccaccaccgccaccata 60052
>dbj|AP006129.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT27K02, TM0225, complete sequence Length = 70805 Score = 38.2 bits (19), Expect = 9.8 Identities = 38/43 (88%), Gaps = 1/43 (2%) Strand = Plus / Minus Query: 84 aaacaactatcgccaccaccaaaca-ccgccaccgccaccata 125 ||||||| | |||| |||||||||| || |||||||||||||| Sbjct: 17011 aaacaacaaccgccgccaccaaacaaccaccaccgccaccata 16969
>dbj|AP004981.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT13N17, TM0436b, complete sequence Length = 43428 Score = 38.2 bits (19), Expect = 9.8 Identities = 28/31 (90%) Strand = Plus / Plus Query: 94 cgccaccaccaaacaccgccaccgccaccat 124 ||||||||||| |||| ||||||||||||| Sbjct: 18865 cgccaccaccatccaccaccaccgccaccat 18895
>dbj|D63582.1| Oryza sativa mRNA for EF-1 alpha, complete cds Length = 1637 Score = 38.2 bits (19), Expect = 9.8 Identities = 37/43 (86%) Strand = Plus / Minus Query: 152 ctcatttcttcttgatcgcagccttggtaaccttggcgccggt 194 |||| ||||||||| ||||||||||| |||||||| ||||| Sbjct: 1410 ctcacttcttcttggcggcagccttggtcaccttggcaccggt 1368 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,585,266 Number of Sequences: 3902068 Number of extensions: 1585266 Number of successful extensions: 122660 Number of sequences better than 10.0: 133 Number of HSP's better than 10.0 without gapping: 130 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 122021 Number of HSP's gapped (non-prelim): 646 length of query: 198 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 176 effective length of database: 17,147,199,772 effective search space: 3017907159872 effective search space used: 3017907159872 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)