| Clone Name | rbags11p14 |
|---|---|
| Clone Library Name | barley_pub |
>SRA10_CAEEL (Q20405) Serpentine receptor class alpha-10 (Protein sra-10)| Length = 336 Score = 35.0 bits (79), Expect = 0.20 Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 1/54 (1%) Frame = -3 Query: 496 GSTLFNLSLLTSDMWAVAIRLLIYRQQINWLYYVAFAVVAI-GLIVYSLNESSS 338 G TL++ +LT + I + IY + W Y V FA V++ L++Y +N+ S Sbjct: 255 GLTLYSTMVLTLRLHKSMIPISIYHNMVWWAYTVPFAAVSLPALLIYRINQVGS 308
>HCHA_PSEAE (Q9I4K0) Chaperone protein hchA (Hsp31)| Length = 291 Score = 34.7 bits (78), Expect = 0.26 Identities = 16/33 (48%), Positives = 18/33 (54%) Frame = +2 Query: 56 PS*HNIFFPLKNSCSSYT*TTHDFISAHFPLPY 154 P+ HN FFP S S YT DF A +P PY Sbjct: 15 PAEHNAFFPSPYSLSQYTSAKTDFDGADYPTPY 47
>YHA8_YEAST (P38750) Hypothetical 70.0 kDa protein in PRPS4-STE20 intergenic| region Length = 627 Score = 32.3 bits (72), Expect = 1.3 Identities = 18/65 (27%), Positives = 34/65 (52%) Frame = -3 Query: 598 EAVAWSPTMISLFAGYAVALLMFYTITPFVLKMSGSTLFNLSLLTSDMWAVAIRLLIYRQ 419 + VA +P +++L G A+ +FY + M G+ LFN ++L + + + IY Sbjct: 59 DIVARNPGIVNLITGVNFAMGLFYVV------MMGADLFNSNILFFSVGVLRKAVTIYDL 112 Query: 418 QINWL 404 I+W+ Sbjct: 113 MISWV 117
>HUT1_YEAST (Q12520) UDP-galactose transporter homolog 1 (Multicopy suppressor| of leflunomide-sensitivity protein 6) Length = 339 Score = 31.2 bits (69), Expect = 2.8 Identities = 17/89 (19%), Positives = 42/89 (47%) Frame = -3 Query: 604 SLEAVAWSPTMISLFAGYAVALLMFYTITPFVLKMSGSTLFNLSLLTSDMWAVAIRLLIY 425 +++ W M+ F G +FYT+ F GS + + +T M ++ + ++++ Sbjct: 248 TMDPQVWGYLMLYSFCGAMGQCFIFYTLEQF-----GSLVLIMITVTRKMVSMILSIIVF 302 Query: 424 RQQINWLYYVAFAVVAIGLIVYSLNESSS 338 + + + +V +V G+ +LN+ + Sbjct: 303 GKSVRFQQWVGMFIVFGGITWEALNKKKA 331
>Y1985_VIBVU (Q8DB38) UPF0209 protein VV1_1985| Length = 672 Score = 30.8 bits (68), Expect = 3.7 Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 4/87 (4%) Frame = -1 Query: 300 SINNFQVMITQQVV-LIWTARKRSNWKKHISVRGSTYKVSSMVSDMVIIKYGSGK---CA 133 +++NF Q V LIW R + W+ H + TY + + + Sbjct: 422 TLDNFTAKFEQSVEQLIWDERSQQ-WQVHTQGQHDTYSAVVIANGHEFQTFSQTADIPLG 480 Query: 132 EIKSCVVHVYDEQLFFKGKNMLC*DGY 52 ++K V HV + K K++LC DGY Sbjct: 481 QVKGQVSHVPATETLSKLKSVLCYDGY 507
>AQP12_HUMAN (Q8IXF9) Aquaporin-12A (AQP-12)| Length = 295 Score = 30.0 bits (66), Expect = 6.3 Identities = 28/92 (30%), Positives = 41/92 (44%) Frame = -3 Query: 649 GLLVSAIQIFIFERKSLEAVAWSPTMISLFAGYAVALLMFYTITPFVLKMSGSTLFNLSL 470 G LV A F F L P ++G AVALL+ T+T + S FN +L Sbjct: 150 GALVEAACAFCFHLTLLHLRHSPPA----YSGPAVALLV--TVTAYTAGPFTSAFFNPAL 203 Query: 469 LTSDMWAVAIRLLIYRQQINWLYYVAFAVVAI 374 S +A + L+ Q+ WL + V+A+ Sbjct: 204 AASVTFACSGHTLLEYVQVYWLGPLTGMVLAV 235
>US19_HCMVT (P69337) Transmembrane protein HWLF4| Length = 240 Score = 29.6 bits (65), Expect = 8.3 Identities = 12/40 (30%), Positives = 22/40 (55%) Frame = -3 Query: 586 WSPTMISLFAGYAVALLMFYTITPFVLKMSGSTLFNLSLL 467 W P+++SL A+ L + PF L + +TL ++L+ Sbjct: 155 WLPSVLSLLCATALGLWLLRAAAPFFLGLHATTLLTVTLM 194
>US19_HCMVA (P69336) Transmembrane protein HWLF4| Length = 240 Score = 29.6 bits (65), Expect = 8.3 Identities = 12/40 (30%), Positives = 22/40 (55%) Frame = -3 Query: 586 WSPTMISLFAGYAVALLMFYTITPFVLKMSGSTLFNLSLL 467 W P+++SL A+ L + PF L + +TL ++L+ Sbjct: 155 WLPSVLSLLCATALGLWLLRAAAPFFLGLHATTLLTVTLM 194 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 87,164,794 Number of Sequences: 219361 Number of extensions: 1686336 Number of successful extensions: 4444 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 4346 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4444 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6257125380 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)