Clone Name	rbags11p14
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	ref|XM_475337.1| Oryza sativa (japonica cultivar-group), predic...	268	2e-68
2	dbj|AK066046.1| Oryza sativa (japonica cultivar-group) cDNA clon...	268	2e-68
3	gb|AC137611.3| Oryza sativa (japonica cultivar-group) chromosome...	96	2e-16
4	dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D...	96	2e-16
5	gb|AC137004.2| Oryza sativa (japonica cultivar-group) chromosome...	58	4e-05
6	gb|AC113309.7| Mus musculus chromosome 6, clone RP23-440D19, com...	44	0.57
7	gb|AC163325.7| Mus musculus chromosome 1, clone RP23-76L21, comp...	42	2.3
8	gb|AC153633.10| Mus musculus 6 BAC RP23-13K24 (Roswell Park Canc...	42	2.3
9	gb|AC153878.11| Mus musculus 6 BAC RP23-229B22 (Roswell Park Can...	42	2.3
10	gb|AC120859.12| Mus musculus chromosome 18, clone RP24-200D2, co...	42	2.3
11	gb|AC125078.2| Mus musculus BAC clone RP23-478C7 from chromosome...	42	2.3
12	gb|AC119156.9| Mus musculus chromosome 1, clone RP24-534J20, com...	42	2.3
13	emb|BX004969.5| Zebrafish DNA sequence from clone CH211-89C12 in...	42	2.3
14	emb|AL845516.8| Zebrafish DNA sequence from clone DKEY-43F11, co...	42	2.3
15	emb|CR450796.7| Zebrafish DNA sequence from clone CH211-9N7 in l...	42	2.3
16	gb|AC153922.6| Mus musculus 6 BAC RP23-81P16 (Roswell Park Cance...	42	2.3
17	emb|AL606928.9| Mouse DNA sequence from clone RP23-154F2 on chro...	42	2.3
18	gb|AF193811.1| Dictyostelium discoideum Rh-like glycoprotein Rhg...	40	9.0
19	ref|XM_641409.1| Dictyostelium discoideum hypothetical protein (...	40	9.0
20	ref|XM_633950.1| Dictyostelium discoideum Rh-like glycoprotein (...	40	9.0
21	gb|AY850394.1| Lycopersicon esculentum cultivar Heinz1706 chromo...	40	9.0
22	gb|AC175831.3| Mus musculus BAC clone RP24-285G1 from chromosome...	40	9.0
23	gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete...	40	9.0
24	gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome	40	9.0
25	gb|AC166096.2| Mus musculus BAC clone RP24-467F14 from chromosom...	40	9.0
26	emb|Z67881.1|CEC52G5 Caenorhabditis elegans Cosmid C52G5, comple...	40	9.0
27	gb|AC122044.3| Mus musculus BAC clone RP24-449D16 from chromosom...	40	9.0
28	gb|AC127169.13| Medicago truncatula clone mth2-36n3, complete se...	40	9.0
29	emb|AL450389.12| Human DNA sequence from clone RP5-929G5 on chro...	40	9.0
30	emb|AL109753.9|HSJ875J14 Human DNA sequence from clone RP5-875J1...	40	9.0
31	gb|AF510714.1| Dictyostelium discoideum Rh-like glycoprotein gen...	40	9.0
32	emb|CR628406.8| Zebrafish DNA sequence from clone CH211-146A2 in...	40	9.0
33	emb|BX890550.10| Zebrafish DNA sequence from clone DKEYP-110B6 i...	40	9.0
34	gb|AC107030.3| Homo sapiens 3 BAC RP11-603J22 (Roswell Park Canc...	40	9.0
35	gb|AC112490.7| Homo sapiens 3 BAC RP11-326J2 (Roswell Park Cance...	40	9.0
36	gb|AC109592.3| Homo sapiens BAC clone RP11-750O22 from 4, comple...	40	9.0
37	gb|AF312994.1|AF312994 Mus musculus chromosome 1 clone MML, comp...	40	9.0
38	gb|AY546359.1| Helicella obvia 16S ribosomal RNA gene, partial s...	40	9.0
39	emb|CR376864.1| Pan troglodytes chromosome X BAC PTB-045G22, com...	40	9.0
40	gb|AC106891.3| Homo sapiens BAC clone RP11-18K19 from 2, complet...	40	9.0
41	gb|AC120860.7| Mus musculus chromosome 1, clone RP23-26I10, comp...	40	9.0
42	emb|BX088724.6| Zebrafish DNA sequence from clone DKEY-15G22, co...	40	9.0
43	emb|BX544871.4| Zebrafish DNA sequence from clone DKEY-244F16 in...	40	9.0
44	ref|XM_571952.1| Cryptococcus neoformans var. neoformans JEC21 c...	40	9.0
45	emb|CR382376.7| Zebrafish DNA sequence from clone DKEY-54L11 in ...	40	9.0
46	gb|AE016879.1| Bacillus anthracis str. Ames, complete genome	40	9.0
47	emb|CT010477.16| Mouse DNA sequence from clone RP23-361M19 on ch...	40	9.0
48	gb|AC132353.3| Mus musculus BAC clone RP24-100I23 from 17, compl...	40	9.0
49	emb|AL805901.6| Mouse DNA sequence from clone RP23-24K4 on chrom...	40	9.0
50	emb|AL606529.9| Human DNA sequence from clone RP4-744B2 on chrom...	40	9.0

---

>ref|XM_475337.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1065

 Score =  268 bits (135), Expect = 2e-68
 Identities = 240/275 (87%)
 Strand = Plus / Minus

                                                                       
Query: 371 tccaatggccacaaccgcgaatgctacgtagtacagccagtttatctgttgtcgatagat 430
           ||||||||||||||| ||||| ||||  |||||||||||||||||||||||  |||||| 
Sbjct: 894 tccaatggccacaactgcgaacgctatatagtacagccagtttatctgttggtgatagaa 835

                                                                       
Query: 431 caatagtcgaatggcgactgcccacatgtcagatgttaagagtgagaggttaaacaacgt 490
            || | |||||||||||||||||||||||| ||||||| |||||| ||||| ||||| ||
Sbjct: 834 taaaactcgaatggcgactgcccacatgtcggatgttaggagtgaaaggttgaacaatgt 775

                                                                       
Query: 491 tgatccactcatcttaaggacaaaaggagtaatggtgtagaacattaataatgcaacggc 550
           |||||||||||||||||||||||||||||| ||| |||||||||| |||| ||| || ||
Sbjct: 774 tgatccactcatcttaaggacaaaaggagtgatgctgtagaacataaatagtgccactgc 715

                                                                       
Query: 551 atatcctgcgaacaaacttatcattgttggagaccaggcaactgcttctaggcttttcct 610
           | |||||||||||| || || |||||||||||||||||||| |||  ||| | | ||| |
Sbjct: 714 aaatcctgcgaacagacataacattgttggagaccaggcaattgcaactaagttcttctt 655

                                              
Query: 611 ttcaaatatgaatatctgaattgcactgacaagca 645
           ||||||||| ||||||||||||  |||||||||||
Sbjct: 654 ttcaaatattaatatctgaattatactgacaagca 620

---

>dbj|AK066046.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013048I21, full
            insert sequence
          Length = 1574

 Score =  268 bits (135), Expect = 2e-68
 Identities = 240/275 (87%)
 Strand = Plus / Minus

                                                                        
Query: 371  tccaatggccacaaccgcgaatgctacgtagtacagccagtttatctgttgtcgatagat 430
            ||||||||||||||| ||||| ||||  |||||||||||||||||||||||  |||||| 
Sbjct: 1008 tccaatggccacaactgcgaacgctatatagtacagccagtttatctgttggtgatagaa 949

                                                                        
Query: 431  caatagtcgaatggcgactgcccacatgtcagatgttaagagtgagaggttaaacaacgt 490
             || | |||||||||||||||||||||||| ||||||| |||||| ||||| ||||| ||
Sbjct: 948  taaaactcgaatggcgactgcccacatgtcggatgttaggagtgaaaggttgaacaatgt 889

                                                                        
Query: 491  tgatccactcatcttaaggacaaaaggagtaatggtgtagaacattaataatgcaacggc 550
            |||||||||||||||||||||||||||||| ||| |||||||||| |||| ||| || ||
Sbjct: 888  tgatccactcatcttaaggacaaaaggagtgatgctgtagaacataaatagtgccactgc 829

                                                                        
Query: 551  atatcctgcgaacaaacttatcattgttggagaccaggcaactgcttctaggcttttcct 610
            | |||||||||||| || || |||||||||||||||||||| |||  ||| | | ||| |
Sbjct: 828  aaatcctgcgaacagacataacattgttggagaccaggcaattgcaactaagttcttctt 769

                                               
Query: 611  ttcaaatatgaatatctgaattgcactgacaagca 645
            ||||||||| ||||||||||||  |||||||||||
Sbjct: 768  ttcaaatattaatatctgaattatactgacaagca 734

---

>gb|AC137611.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0020H14,
              complete sequence
          Length = 185623

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 63/68 (92%)
 Strand = Plus / Minus

                                                                          
Query: 437    tcgaatggcgactgcccacatgtcagatgttaagagtgagaggttaaacaacgttgatcc 496
              |||||||||||||||||||||||| ||||||| |||||| ||||| ||||| ||||||||
Sbjct: 162082 tcgaatggcgactgcccacatgtcggatgttaggagtgaaaggttgaacaatgttgatcc 162023

                      
Query: 497    actcatct 504
              ||||||||
Sbjct: 162022 actcatct 162015



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 55/62 (88%)
 Strand = Plus / Minus

                                                                          
Query: 503    cttaaggacaaaaggagtaatggtgtagaacattaataatgcaacggcatatcctgcgaa 562
              |||||||||||||||||| ||| |||||||||| |||| ||| || ||| ||||||||||
Sbjct: 161496 cttaaggacaaaaggagtgatgctgtagaacataaatagtgccactgcaaatcctgcgaa 161437

                
Query: 563    ca 564
              ||
Sbjct: 161436 ca 161435



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 45/49 (91%)
 Strand = Plus / Minus

                                                               
Query: 371    tccaatggccacaaccgcgaatgctacgtagtacagccagtttatctgt 419
              ||||||||||||||| ||||| ||||  |||||||||||||||||||||
Sbjct: 162229 tccaatggccacaactgcgaacgctatatagtacagccagtttatctgt 162181



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 56/65 (86%)
 Strand = Plus / Minus

                                                                          
Query: 440    aatggcgactgcccacatgtcagatgttaagagtgagaggttaaacaacgttgatccact 499
              ||||||||| ||||| |  |||| |||||| ||||||||||||||||  |||| ||||||
Sbjct: 168947 aatggcgaccgcccaaacatcagttgttaaaagtgagaggttaaacatagttgctccact 168888

                   
Query: 500    catct 504
              |||||
Sbjct: 168887 catct 168883



 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 572    cattgttggagaccaggcaa 591
              ||||||||||||||||||||
Sbjct: 161302 cattgttggagaccaggcaa 161283

---

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 63/68 (92%)
 Strand = Plus / Minus

                                                                            
Query: 437      tcgaatggcgactgcccacatgtcagatgttaagagtgagaggttaaacaacgttgatcc 496
                |||||||||||||||||||||||| ||||||| |||||| ||||| ||||| ||||||||
Sbjct: 21608226 tcgaatggcgactgcccacatgtcggatgttaggagtgaaaggttgaacaatgttgatcc 21608167

                        
Query: 497      actcatct 504
                ||||||||
Sbjct: 21608166 actcatct 21608159



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 55/62 (88%)
 Strand = Plus / Minus

                                                                            
Query: 503      cttaaggacaaaaggagtaatggtgtagaacattaataatgcaacggcatatcctgcgaa 562
                |||||||||||||||||| ||| |||||||||| |||| ||| || ||| ||||||||||
Sbjct: 21607640 cttaaggacaaaaggagtgatgctgtagaacataaatagtgccactgcaaatcctgcgaa 21607581

                  
Query: 563      ca 564
                ||
Sbjct: 21607580 ca 21607579



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 45/49 (91%)
 Strand = Plus / Minus

                                                                 
Query: 371      tccaatggccacaaccgcgaatgctacgtagtacagccagtttatctgt 419
                ||||||||||||||| ||||| ||||  |||||||||||||||||||||
Sbjct: 21608373 tccaatggccacaactgcgaacgctatatagtacagccagtttatctgt 21608325



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 56/65 (86%)
 Strand = Plus / Minus

                                                                            
Query: 440      aatggcgactgcccacatgtcagatgttaagagtgagaggttaaacaacgttgatccact 499
                ||||||||| ||||| |  |||| |||||| ||||||||||||||||  |||| ||||||
Sbjct: 21615091 aatggcgaccgcccaaacatcagttgttaaaagtgagaggttaaacatagttgctccact 21615032

                     
Query: 500      catct 504
                |||||
Sbjct: 21615031 catct 21615027



 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 572      cattgttggagaccaggcaa 591
                ||||||||||||||||||||
Sbjct: 21607446 cattgttggagaccaggcaa 21607427

---

>gb|AC137004.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0615D12,
            complete sequence
          Length = 155402

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 56/65 (86%)
 Strand = Plus / Minus

                                                                        
Query: 440  aatggcgactgcccacatgtcagatgttaagagtgagaggttaaacaacgttgatccact 499
            ||||||||| ||||| |  |||| |||||| ||||||||||||||||  |||| ||||||
Sbjct: 6267 aatggcgaccgcccaaacatcagttgttaaaagtgagaggttaaacatagttgctccact 6208

                 
Query: 500  catct 504
            |||||
Sbjct: 6207 catct 6203

---

>gb|AC113309.7| Mus musculus chromosome 6, clone RP23-440D19, complete sequence
          Length = 229553

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 237    ttttccttgctgtccaaattagaactactt 266
              |||||||||||||||| ||||||| |||||
Sbjct: 105127 ttttccttgctgtccacattagaagtactt 105098

---

>gb|AC163325.7| Mus musculus chromosome 1, clone RP23-76L21, complete sequence
          Length = 253153

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 224    ttccagttgcttcttttcctt 244
              |||||||||||||||||||||
Sbjct: 126556 ttccagttgcttcttttcctt 126536

---

>gb|AC153633.10| Mus musculus 6 BAC RP23-13K24 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 216841

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 13     agtatttactgtactactaca 33
              |||||||||||||||||||||
Sbjct: 177250 agtatttactgtactactaca 177230

---

>gb|AC153878.11| Mus musculus 6 BAC RP23-229B22 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 185647

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 13    agtatttactgtactactaca 33
             |||||||||||||||||||||
Sbjct: 96368 agtatttactgtactactaca 96388

---

>gb|AC120859.12| Mus musculus chromosome 18, clone RP24-200D2, complete sequence
          Length = 184327

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 60    cctaacacaacatattctttc 80
             |||||||||||||||||||||
Sbjct: 75956 cctaacacaacatattctttc 75976

---

>gb|AC125078.2| Mus musculus BAC clone RP23-478C7 from chromosome 6, complete sequence
          Length = 204570

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 36     ttacaaaaatattctgataac 56
              |||||||||||||||||||||
Sbjct: 159371 ttacaaaaatattctgataac 159351

---

>gb|AC119156.9| Mus musculus chromosome 1, clone RP24-534J20, complete sequence
          Length = 185873

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 224    ttccagttgcttcttttcctt 244
              |||||||||||||||||||||
Sbjct: 162589 ttccagttgcttcttttcctt 162569

---

>emb|BX004969.5| Zebrafish DNA sequence from clone CH211-89C12 in linkage group 7,
             complete sequence
          Length = 161142

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 33    atgttacaaaaatattctgat 53
             |||||||||||||||||||||
Sbjct: 90087 atgttacaaaaatattctgat 90107

---

>emb|AL845516.8| Zebrafish DNA sequence from clone DKEY-43F11, complete sequence
          Length = 205826

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 33     atgttacaaaaatattctgat 53
              |||||||||||||||||||||
Sbjct: 155199 atgttacaaaaatattctgat 155179

---

>emb|CR450796.7| Zebrafish DNA sequence from clone CH211-9N7 in linkage group 11,
             complete sequence
          Length = 172794

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 610   tttcaaatatgaatatctgaa 630
             |||||||||||||||||||||
Sbjct: 91275 tttcaaatatgaatatctgaa 91255

---

>gb|AC153922.6| Mus musculus 6 BAC RP23-81P16 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 234722

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 13     agtatttactgtactactaca 33
              |||||||||||||||||||||
Sbjct: 183352 agtatttactgtactactaca 183372

---

>emb|AL606928.9| Mouse DNA sequence from clone RP23-154F2 on chromosome 3, complete
              sequence
          Length = 186605

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 603    cttttcctttcaaatatgaat 623
              |||||||||||||||||||||
Sbjct: 116190 cttttcctttcaaatatgaat 116170

---

>gb|AF193811.1| Dictyostelium discoideum Rh-like glycoprotein RhgA mRNA, complete cds
          Length = 1803

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 275  atcatcacttggaagttgtt 294
            ||||||||||||||||||||
Sbjct: 1662 atcatcacttggaagttgtt 1643

---

>ref|XM_641409.1| Dictyostelium discoideum hypothetical protein (DDB0190766), partial
            mRNA
          Length = 1566

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 151  gtatttgattatgaccatatccgaaacc 178
            |||||||||||| ||||||||| |||||
Sbjct: 1117 gtatttgattatcaccatatccaaaacc 1090

---

>ref|XM_633950.1| Dictyostelium discoideum Rh-like glycoprotein (DDB0191180), partial
            mRNA
          Length = 1584

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 275  atcatcacttggaagttgtt 294
            ||||||||||||||||||||
Sbjct: 1548 atcatcacttggaagttgtt 1529

---

>gb|AY850394.1| Lycopersicon esculentum cultivar Heinz1706 chromosome 12 centromeric
              region
          Length = 326112

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 64     acacaacatattctttcccttgaa 87
              |||| |||||||||||||||||||
Sbjct: 168398 acactacatattctttcccttgaa 168375

---

>gb|AC175831.3| Mus musculus BAC clone RP24-285G1 from chromosome 3, complete sequence
          Length = 171981

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 597   tctaggcttttcctttcaaa 616
             ||||||||||||||||||||
Sbjct: 96367 tctaggcttttcctttcaaa 96348

---

>gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete genome
          Length = 5227419

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 607     tcctttcaaatatgaatatc 626
               ||||||||||||||||||||
Sbjct: 1588937 tcctttcaaatatgaatatc 1588956

---

>gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome
          Length = 5228663

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 607     tcctttcaaatatgaatatc 626
               ||||||||||||||||||||
Sbjct: 1588889 tcctttcaaatatgaatatc 1588908

---

>gb|AC166096.2| Mus musculus BAC clone RP24-467F14 from chromosome 9, complete sequence
          Length = 142142

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 85    gaaaaatagttgttcatcat 104
             ||||||||||||||||||||
Sbjct: 76811 gaaaaatagttgttcatcat 76792

---

>emb|Z67881.1|CEC52G5 Caenorhabditis elegans Cosmid C52G5, complete sequence
          Length = 42842

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 561   aacaaacttatcattgttgg 580
             ||||||||||||||||||||
Sbjct: 27042 aacaaacttatcattgttgg 27023

---

>gb|AC122044.3| Mus musculus BAC clone RP24-449D16 from chromosome 3, complete
            sequence
          Length = 123678

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 597  tctaggcttttcctttcaaa 616
            ||||||||||||||||||||
Sbjct: 3390 tctaggcttttcctttcaaa 3371

---

>gb|AC127169.13| Medicago truncatula clone mth2-36n3, complete sequence
          Length = 124554

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 234    ttcttttccttgctgtccaa 253
              ||||||||||||||||||||
Sbjct: 117169 ttcttttccttgctgtccaa 117150

---

>emb|AL450389.12| Human DNA sequence from clone RP5-929G5 on chromosome 1 Contains the
             VANGL1 gene for vang-like 1 (van gogh, Drosophila), the 3'
             end of the CASQ2 gene for calsequestrin 2 (cardiac muscle)
             and one CpG island, complete sequence
          Length = 101623

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 96    gttcatcatatacatgaact 115
             ||||||||||||||||||||
Sbjct: 95813 gttcatcatatacatgaact 95832

---

>emb|AL109753.9|HSJ875J14 Human DNA sequence from clone RP5-875J14 on chromosome Xq13.1-21.1
              Contains the 3' end of the ATRX gene for alpha
              thalassemia/mental retardation syndrome X-linked (RAD54
              homolog, S. cerevisiae), complete sequence
          Length = 148423

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 604    ttttcctttcaaatatgaatatct 627
              |||||||||| |||||||||||||
Sbjct: 131486 ttttcctttccaatatgaatatct 131463

---

>gb|AF510714.1| Dictyostelium discoideum Rh-like glycoprotein gene, complete cds
          Length = 2175

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 275  atcatcacttggaagttgtt 294
            ||||||||||||||||||||
Sbjct: 1788 atcatcacttggaagttgtt 1769

---

>emb|CR628406.8| Zebrafish DNA sequence from clone CH211-146A2 in linkage group 11,
              complete sequence
          Length = 145678

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 250    ccaaattagaactacttgtt 269
              ||||||||||||||||||||
Sbjct: 109110 ccaaattagaactacttgtt 109091

---

>emb|BX890550.10| Zebrafish DNA sequence from clone DKEYP-110B6 in linkage group 13,
              complete sequence
          Length = 174313

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 613    caaatatgaatatctgaatt 632
              ||||||||||||||||||||
Sbjct: 118408 caaatatgaatatctgaatt 118427

---

>gb|AC107030.3| Homo sapiens 3 BAC RP11-603J22 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 171343

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 29     ctacatgttacaaaaatattctga 52
              ||||||||||| ||||||||||||
Sbjct: 138442 ctacatgttactaaaatattctga 138465

---

>gb|AC112490.7| Homo sapiens 3 BAC RP11-326J2 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 63308

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 76    ctttcccttgaaaaatagtt 95
             ||||||||||||||||||||
Sbjct: 51243 ctttcccttgaaaaatagtt 51262

---

>gb|AC109592.3| Homo sapiens BAC clone RP11-750O22 from 4, complete sequence
          Length = 86314

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 115   tacacatgattttatctctg 134
             ||||||||||||||||||||
Sbjct: 44268 tacacatgattttatctctg 44249

---

>gb|AF312994.1|AF312994 Mus musculus chromosome 1 clone MML, complete sequence
          Length = 228283

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 578   tggagaccaggcaactgcttctag 601
             ||||||| ||||||||||||||||
Sbjct: 85394 tggagactaggcaactgcttctag 85417

---

>gb|AY546359.1| Helicella obvia 16S ribosomal RNA gene, partial sequence;
           mitochondrial
          Length = 339

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 252 aaattagaactacttgttgagtta 275
           ||||||||||||| ||||||||||
Sbjct: 214 aaattagaactacatgttgagtta 237

---

>emb|CR376864.1| Pan troglodytes chromosome X BAC PTB-045G22, complete sequence
          Length = 151492

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 604   ttttcctttcaaatatgaatatct 627
             |||||||||| |||||||||||||
Sbjct: 12914 ttttcctttccaatatgaatatct 12937

---

>gb|AC106891.3| Homo sapiens BAC clone RP11-18K19 from 2, complete sequence
          Length = 36852

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 56    ccatcctaacacaacatatt 75
             ||||||||||||||||||||
Sbjct: 19324 ccatcctaacacaacatatt 19305

---

>gb|AC120860.7| Mus musculus chromosome 1, clone RP23-26I10, complete sequence
          Length = 188326

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 578   tggagaccaggcaactgcttctag 601
             ||||||| ||||||||||||||||
Sbjct: 19557 tggagactaggcaactgcttctag 19534

---

>emb|BX088724.6| Zebrafish DNA sequence from clone DKEY-15G22, complete sequence
          Length = 198368

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 613 caaatatgaatatctgaatt 632
           ||||||||||||||||||||
Sbjct: 801 caaatatgaatatctgaatt 820

---

>emb|BX544871.4| Zebrafish DNA sequence from clone DKEY-244F16 in linkage group 18,
              complete sequence
          Length = 203436

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 527    gtagaacattaataatgcaa 546
              ||||||||||||||||||||
Sbjct: 154780 gtagaacattaataatgcaa 154799

---

>ref|XM_571952.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 7
          Length = 276

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 277 catcacttggaagttgttgatact 300
           |||||||||||| |||||||||||
Sbjct: 73  catcacttggaatttgttgatact 96

---

>emb|CR382376.7| Zebrafish DNA sequence from clone DKEY-54L11 in linkage group 18,
            complete sequence
          Length = 48856

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 527  gtagaacattaataatgcaa 546
            ||||||||||||||||||||
Sbjct: 7748 gtagaacattaataatgcaa 7729

---

>gb|AE016879.1| Bacillus anthracis str. Ames, complete genome
          Length = 5227293

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 607     tcctttcaaatatgaatatc 626
               ||||||||||||||||||||
Sbjct: 1588814 tcctttcaaatatgaatatc 1588833

---

>emb|CT010477.16| Mouse DNA sequence from clone RP23-361M19 on chromosome 13, complete
              sequence
          Length = 192967

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 77     tttcccttgaaaaatagttgttca 100
              |||||||||||||| |||||||||
Sbjct: 168543 tttcccttgaaaaacagttgttca 168520

---

>gb|AC132353.3| Mus musculus BAC clone RP24-100I23 from 17, complete sequence
          Length = 202603

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 605    tttcctttcaaatatgaata 624
              ||||||||||||||||||||
Sbjct: 111555 tttcctttcaaatatgaata 111574

---

>emb|AL805901.6| Mouse DNA sequence from clone RP23-24K4 on chromosome X, complete
              sequence
          Length = 243012

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 597    tctaggcttttcctttcaaa 616
              ||||||||||||||||||||
Sbjct: 205662 tctaggcttttcctttcaaa 205643

---

>emb|AL606529.9| Human DNA sequence from clone RP4-744B2 on chromosome 1, complete
             sequence
          Length = 66822

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 96    gttcatcatatacatgaact 115
             ||||||||||||||||||||
Sbjct: 63738 gttcatcatatacatgaact 63757


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,338,916
Number of Sequences: 3902068
Number of extensions: 6338916
Number of successful extensions: 119331
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 119044
Number of HSP's gapped (non-prelim): 287
length of query: 657
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 634
effective length of database: 17,143,297,704
effective search space: 10868850744336
effective search space used: 10868850744336
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---