| Clone Name | rbags12e15 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK071215.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023084I15, full insert sequence Length = 1371 Score = 418 bits (211), Expect = e-114 Identities = 335/375 (89%), Gaps = 1/375 (0%) Strand = Plus / Minus Query: 230 tcaatgactcgggatagcttctggatgcggttcagcaagaagtccccttgcttgatggtc 289 ||||||||||| || || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1193 tcaatgactcgtgacagtttctggatgcggttcagcaagaagtccccttgcttgatggtc 1134 Query: 290 gactggtagaaagcattcctctcatcaggccggtttgtctccaaaacaccagcgaccttg 349 | |||||||| |||||||| | ||||| ||||||||||||| ||||||||| ||||| Sbjct: 1133 gcttggtagaaggcattcctagcgtcaggtcggtttgtctccagaacaccagcaacctta 1074 Query: 350 tcaatcttgcagtgaagcttgccagctgcaataaaacgagaaagttcctggtctatgaaa 409 || ||||||||||||||||| ||||||||||| || || || | |||||||||||||||| Sbjct: 1073 tcgatcttgcagtgaagcttcccagctgcaatgaaccgcgacaattcctggtctatgaaa 1014 Query: 410 tcaacagtcacaccaaatgcagaagccatagcttccatcgtcacactcttgtatgactcc 469 |||||||||||||||||||| | ||||| |||||||| ||||||||||||||||||||| Sbjct: 1013 tcaacagtcacaccaaatgctgcggccatcgcttccattgtcacactcttgtatgactcc 954 Query: 470 aaaaactgtgagtagacgacagtgcgcacttccctcatgtagtagcggaaatgaggttga 529 ||||||||||| ||||| || || |||||||||||||| ||||||||||||| ||| ||| Sbjct: 953 aaaaactgtgaatagacaacggtccgcacttccctcatatagtagcggaaatcaggctga 894 Query: 530 agataacggtctaacttgatctgttccatcaagccagagaatgcaacaaaaaatgacttg 589 ||||| || || ||||| ||||| ||| ||| |||||||||||||||||||||||||||| Sbjct: 893 agatagcgatccaacttaatctgctccgtcatgccagagaatgcaacaaaaaatgacttg 834 Query: 590 tactgggcaattgta 604 |||| |||||||||| Sbjct: 833 tact-ggcaattgta 820
>gb|BT016822.1| Zea mays clone Contig655 mRNA sequence Length = 1636 Score = 416 bits (210), Expect = e-113 Identities = 343/386 (88%), Gaps = 1/386 (0%) Strand = Plus / Minus Query: 223 ttacagatcaatgactcgggatagcttctggatgcggttcagcaagaagtccccttgctt 282 |||||| |||||||| || || |||||||||||||||||||||||||||||||||||||| Sbjct: 1293 ttacaggtcaatgacccgtgaaagcttctggatgcggttcagcaagaagtccccttgctt 1234 Query: 283 gatggtcgactggtagaaagcattcctctcatcaggccggtttgtctccaaaacaccagc 342 |||||||| ||||||||||||||||||||||||||| ||||| ||||||| ||||||||| Sbjct: 1233 gatggtcgcctggtagaaagcattcctctcatcaggtcggttagtctccagaacaccagc 1174 Query: 343 gaccttgtcaatcttgcagtgaagcttgccagctgcaataaaacgagaaagttcctggtc 402 ||||| |||||||||||||| ||||| ||||||||||| || || || ||||||||||| Sbjct: 1173 aaccttatcaatcttgcagtgcagcttcccagctgcaatgaaccgtgacagttcctggtc 1114 Query: 403 tatgaaatcaacagtcacaccaaatgcagaagccatagcttccatcgtcacactcttgta 462 |||||||||||||| ||||| || |||| ||||| |||||||| |||||||||||||| Sbjct: 1113 aatgaaatcaacagttacaccgaacgcagtggccattgcttccattgtcacactcttgta 1054 Query: 463 tgactccaaaaactgtgagtagacgacagtgcgcacttccctcatgtagtagcggaaatg 522 |||||| || ||||||||||| || || |||||||||||||||||||||||||||||||| Sbjct: 1053 tgactctaagaactgtgagtataccacggtgcgcacttccctcatgtagtagcggaaatg 994 Query: 523 aggttgaagataacggtctaacttgatctgttccatcaagccagagaatgcaacaaaaaa 582 ||| ||||||||||||||||||||||| || || ||| ||||| |||||||| || || Sbjct: 993 aggctgaagataacggtctaacttgatttgctctgtcagaccagaaaatgcaacgaagaa 934 Query: 583 tgacttgtactgggcaattgtacagg 608 ||||| |||| |||| ||||||||| Sbjct: 933 cgacttatact-ggcagttgtacagg 909
>gb|AY104803.1| Zea mays PCO064157 mRNA sequence Length = 1631 Score = 416 bits (210), Expect = e-113 Identities = 343/386 (88%), Gaps = 1/386 (0%) Strand = Plus / Minus Query: 223 ttacagatcaatgactcgggatagcttctggatgcggttcagcaagaagtccccttgctt 282 |||||| |||||||| || || |||||||||||||||||||||||||||||||||||||| Sbjct: 1308 ttacaggtcaatgacccgtgaaagcttctggatgcggttcagcaagaagtccccttgctt 1249 Query: 283 gatggtcgactggtagaaagcattcctctcatcaggccggtttgtctccaaaacaccagc 342 |||||||| ||||||||||||||||||||||||||| ||||| ||||||| ||||||||| Sbjct: 1248 gatggtcgcctggtagaaagcattcctctcatcaggtcggttagtctccagaacaccagc 1189 Query: 343 gaccttgtcaatcttgcagtgaagcttgccagctgcaataaaacgagaaagttcctggtc 402 ||||| |||||||||||||| ||||| ||||||||||| || || || ||||||||||| Sbjct: 1188 aaccttatcaatcttgcagtgcagcttcccagctgcaatgaaccgtgacagttcctggtc 1129 Query: 403 tatgaaatcaacagtcacaccaaatgcagaagccatagcttccatcgtcacactcttgta 462 |||||||||||||| ||||| || |||| ||||| |||||||| |||||||||||||| Sbjct: 1128 aatgaaatcaacagttacaccgaacgcagtggccattgcttccattgtcacactcttgta 1069 Query: 463 tgactccaaaaactgtgagtagacgacagtgcgcacttccctcatgtagtagcggaaatg 522 |||||| || ||||||||||| || || |||||||||||||||||||||||||||||||| Sbjct: 1068 tgactctaagaactgtgagtataccacggtgcgcacttccctcatgtagtagcggaaatg 1009 Query: 523 aggttgaagataacggtctaacttgatctgttccatcaagccagagaatgcaacaaaaaa 582 ||| ||||||||||||||||||||||| || || ||| ||||| |||||||| || || Sbjct: 1008 aggctgaagataacggtctaacttgatttgctctgtcagaccagaaaatgcaacgaagaa 949 Query: 583 tgacttgtactgggcaattgtacagg 608 ||||| |||| |||| ||||||||| Sbjct: 948 cgacttatact-ggcagttgtacagg 924
>ref|XM_472939.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1170 Score = 375 bits (189), Expect = e-100 Identities = 334/381 (87%), Gaps = 1/381 (0%) Strand = Plus / Minus Query: 224 tacagatcaatgactcgggatagcttctggatgcggttcagcaagaagtccccttgcttg 283 ||||| ||||||||||| ||||||||||||||||||||||||| |||||||||||||||| Sbjct: 1169 tacaggtcaatgactcgtgatagcttctggatgcggttcagcaggaagtccccttgcttg 1110 Query: 284 atggtcgactggtagaaagcattcctctcatcaggccggtttgtctccaaaacaccagcg 343 ||||| | ||||||||||||||| || ||||||||||||| ||||||| || | ||| Sbjct: 1109 atggttgcctggtagaaagcatttctggcatcaggccggttcgtctccaggacgcaagca 1050 Query: 344 accttgtcaatcttgcagtgaagcttgccagctgcaataaaacgagaaagttcctggtct 403 ||||| || ||||||||||| ||||| ||||| ||||| || || || | |||| ||||| Sbjct: 1049 accttatcgatcttgcagtggagctttccagcagcaatgaagcgtgacaattccaggtct 990 Query: 404 atgaaatcaacagtcacaccaaatgcagaagccatagcttccatcgtcacactcttgtat 463 ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 989 atgaaatcaacggtcacaccaaatgcagaagccattgcttccatcgtcacactcttgtag 930 Query: 464 gactccaaaaactgtgagtagacgacagtgcgcacttccctcatgtagtagcggaaatga 523 ||||| | || ||||| ||||| ||||| || ||||| | ||||||||| ||||||||| Sbjct: 929 gactcgaggaattgtgaatagacaacagtacggacttcacgcatgtagtaacggaaatga 870 Query: 524 ggttgaagataacggtctaacttgatctgttccatcaagccagagaatgcaacaaaaaat 583 || || || |||||||||||||||||||| ||| |||||||||||||||| |||||||| Sbjct: 869 ggctgcaggtaacggtctaacttgatctgctccgtcaagccagagaatgcggcaaaaaat 810 Query: 584 gacttgtactgggcaattgta 604 |||||||||| |||||||||| Sbjct: 809 gacttgtact-ggcaattgta 790
>dbj|AK104327.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-028-F11, full insert sequence Length = 1510 Score = 375 bits (189), Expect = e-100 Identities = 334/381 (87%), Gaps = 1/381 (0%) Strand = Plus / Minus Query: 224 tacagatcaatgactcgggatagcttctggatgcggttcagcaagaagtccccttgcttg 283 ||||| ||||||||||| ||||||||||||||||||||||||| |||||||||||||||| Sbjct: 1290 tacaggtcaatgactcgtgatagcttctggatgcggttcagcaggaagtccccttgcttg 1231 Query: 284 atggtcgactggtagaaagcattcctctcatcaggccggtttgtctccaaaacaccagcg 343 ||||| | ||||||||||||||| || ||||||||||||| ||||||| || | ||| Sbjct: 1230 atggttgcctggtagaaagcatttctggcatcaggccggttcgtctccaggacgcaagca 1171 Query: 344 accttgtcaatcttgcagtgaagcttgccagctgcaataaaacgagaaagttcctggtct 403 ||||| || ||||||||||| ||||| ||||| ||||| || || || | |||| ||||| Sbjct: 1170 accttatcgatcttgcagtggagctttccagcagcaatgaagcgtgacaattccaggtct 1111 Query: 404 atgaaatcaacagtcacaccaaatgcagaagccatagcttccatcgtcacactcttgtat 463 ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1110 atgaaatcaacggtcacaccaaatgcagaagccattgcttccatcgtcacactcttgtag 1051 Query: 464 gactccaaaaactgtgagtagacgacagtgcgcacttccctcatgtagtagcggaaatga 523 ||||| | || ||||| ||||| ||||| || ||||| | ||||||||| ||||||||| Sbjct: 1050 gactcgaggaattgtgaatagacaacagtacggacttcacgcatgtagtaacggaaatga 991 Query: 524 ggttgaagataacggtctaacttgatctgttccatcaagccagagaatgcaacaaaaaat 583 || || || |||||||||||||||||||| ||| |||||||||||||||| |||||||| Sbjct: 990 ggctgcaggtaacggtctaacttgatctgctccgtcaagccagagaatgcggcaaaaaat 931 Query: 584 gacttgtactgggcaattgta 604 |||||||||| |||||||||| Sbjct: 930 gacttgtact-ggcaattgta 911
>dbj|AK068887.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023002M12, full insert sequence Length = 1515 Score = 375 bits (189), Expect = e-100 Identities = 334/381 (87%), Gaps = 1/381 (0%) Strand = Plus / Minus Query: 224 tacagatcaatgactcgggatagcttctggatgcggttcagcaagaagtccccttgcttg 283 ||||| ||||||||||| ||||||||||||||||||||||||| |||||||||||||||| Sbjct: 1295 tacaggtcaatgactcgtgatagcttctggatgcggttcagcaggaagtccccttgcttg 1236 Query: 284 atggtcgactggtagaaagcattcctctcatcaggccggtttgtctccaaaacaccagcg 343 ||||| | ||||||||||||||| || ||||||||||||| ||||||| || | ||| Sbjct: 1235 atggttgcctggtagaaagcatttctggcatcaggccggttcgtctccaggacgcaagca 1176 Query: 344 accttgtcaatcttgcagtgaagcttgccagctgcaataaaacgagaaagttcctggtct 403 ||||| || ||||||||||| ||||| ||||| ||||| || || || | |||| ||||| Sbjct: 1175 accttatcgatcttgcagtggagctttccagcagcaatgaagcgtgacaattccaggtct 1116 Query: 404 atgaaatcaacagtcacaccaaatgcagaagccatagcttccatcgtcacactcttgtat 463 ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1115 atgaaatcaacggtcacaccaaatgcagaagccattgcttccatcgtcacactcttgtag 1056 Query: 464 gactccaaaaactgtgagtagacgacagtgcgcacttccctcatgtagtagcggaaatga 523 ||||| | || ||||| ||||| ||||| || ||||| | ||||||||| ||||||||| Sbjct: 1055 gactcgaggaattgtgaatagacaacagtacggacttcacgcatgtagtaacggaaatga 996 Query: 524 ggttgaagataacggtctaacttgatctgttccatcaagccagagaatgcaacaaaaaat 583 || || || |||||||||||||||||||| ||| |||||||||||||||| |||||||| Sbjct: 995 ggctgcaggtaacggtctaacttgatctgctccgtcaagccagagaatgcggcaaaaaat 936 Query: 584 gacttgtactgggcaattgta 604 |||||||||| |||||||||| Sbjct: 935 gacttgtact-ggcaattgta 916
>dbj|AB037149.1| Oryza sativa (japonica cultivar-group) OsRPN7 mRNA for 26S proteasome regulatory particle non-ATPase subunit7, complete cds Length = 1547 Score = 375 bits (189), Expect = e-100 Identities = 334/381 (87%), Gaps = 1/381 (0%) Strand = Plus / Minus Query: 224 tacagatcaatgactcgggatagcttctggatgcggttcagcaagaagtccccttgcttg 283 ||||| ||||||||||| ||||||||||||||||||||||||| |||||||||||||||| Sbjct: 1253 tacaggtcaatgactcgtgatagcttctggatgcggttcagcaggaagtccccttgcttg 1194 Query: 284 atggtcgactggtagaaagcattcctctcatcaggccggtttgtctccaaaacaccagcg 343 ||||| | ||||||||||||||| || ||||||||||||| ||||||| || | ||| Sbjct: 1193 atggttgcctggtagaaagcatttctggcatcaggccggttcgtctccaggacgcaagca 1134 Query: 344 accttgtcaatcttgcagtgaagcttgccagctgcaataaaacgagaaagttcctggtct 403 ||||| || ||||||||||| ||||| ||||| ||||| || || || | |||| ||||| Sbjct: 1133 accttatcgatcttgcagtggagctttccagcagcaatgaagcgtgacaattccaggtct 1074 Query: 404 atgaaatcaacagtcacaccaaatgcagaagccatagcttccatcgtcacactcttgtat 463 ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1073 atgaaatcaacggtcacaccaaatgcagaagccattgcttccatcgtcacactcttgtag 1014 Query: 464 gactccaaaaactgtgagtagacgacagtgcgcacttccctcatgtagtagcggaaatga 523 ||||| | || ||||| ||||| ||||| || ||||| | ||||||||| ||||||||| Sbjct: 1013 gactcgaggaattgtgaatagacaacagtacggacttcacgcatgtagtaacggaaatga 954 Query: 524 ggttgaagataacggtctaacttgatctgttccatcaagccagagaatgcaacaaaaaat 583 || || || |||||||||||||||||||| ||| |||||||||||||||| |||||||| Sbjct: 953 ggctgcaggtaacggtctaacttgatctgctccgtcaagccagagaatgcggcaaaaaat 894 Query: 584 gacttgtactgggcaattgta 604 |||||||||| |||||||||| Sbjct: 893 gacttgtact-ggcaattgta 874
>gb|AY107400.1| Zea mays PCO125916 mRNA sequence Length = 1443 Score = 311 bits (157), Expect = 1e-81 Identities = 317/369 (85%), Gaps = 1/369 (0%) Strand = Plus / Minus Query: 236 actcgggatagcttctggatgcggttcagcaagaagtccccttgcttgatggtcgactgg 295 ||||| || |||||||||||||||||||||| |||||| |||||||||||||| | |||| Sbjct: 1201 actcgtgacagcttctggatgcggttcagcaggaagtctccttgcttgatggttgcctgg 1142 Query: 296 tagaaagcattcctctcatcaggccggtttgtctccaaaacaccagcgaccttgtcaatc 355 ||||| || ||||| ||||||| ||||| || ||||| || ||||| || ||||| ||| Sbjct: 1141 tagaaggcgttcctagcatcaggtcggttcgtttccaagacgccagcaactttgtctatc 1082 Query: 356 ttgcagtgaagcttgccagctgcaataaaacgagaaagttcctggtctatgaaatcaaca 415 |||||||| ||||| ||||| ||||| || || || |||||||||||||| || || || Sbjct: 1081 ttgcagtggagcttcccagcggcaatgaagcgtgacagttcctggtctataaagtcgact 1022 Query: 416 gtcacaccaaatgcagaagccatagcttccatcgtcacactcttgtatgactccaaaaac 475 || || |||||||||| |||||| |||||||| |||||||||||||| || |||| |||| Sbjct: 1021 gtgacgccaaatgcagcagccatggcttccattgtcacactcttgtacgattccagaaac 962 Query: 476 tgtgagtagacgacagtgcgcacttccctcatgtagtagcggaaatgaggttgaagataa 535 ||||||||||| |||||||||||||| | |||||||||||| |||||||| || | ||| Sbjct: 961 tgtgagtagacaacagtgcgcacttcacgcatgtagtagcgaaaatgaggctgcaagtaa 902 Query: 536 cggtctaacttgatctgttccatcaagccagagaatgcaacaaaaaatgacttgtactgg 595 || ||||||||||| |||| |||||||||||||||||| ||||||||||||||||| | Sbjct: 901 cgctctaacttgattggttcagtcaagccagagaatgcaataaaaaatgacttgtact-g 843 Query: 596 gcaattgta 604 ||||||||| Sbjct: 842 gcaattgta 834
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 194 bits (98), Expect = 2e-46 Identities = 152/170 (89%) Strand = Plus / Minus Query: 397 ctggtctatgaaatcaacagtcacaccaaatgcagaagccatagcttccatcgtcacact 456 ||||||||||||||||||||||||||||||||| | ||||| |||||||| |||||||| Sbjct: 23484687 ctggtctatgaaatcaacagtcacaccaaatgctgcggccatcgcttccattgtcacact 23484628 Query: 457 cttgtatgactccaaaaactgtgagtagacgacagtgcgcacttccctcatgtagtagcg 516 |||||||||||||||||||||||| ||||| || || |||||||||||||| |||||||| Sbjct: 23484627 cttgtatgactccaaaaactgtgaatagacaacggtccgcacttccctcatatagtagcg 23484568 Query: 517 gaaatgaggttgaagataacggtctaacttgatctgttccatcaagccag 566 ||||||||| |||||||| || || ||||| ||||| ||| ||| ||||| Sbjct: 23484567 gaaatgaggctgaagatagcgatccaacttaatctgctccgtcatgccag 23484518 Score = 182 bits (92), Expect = 9e-43 Identities = 137/152 (90%) Strand = Plus / Minus Query: 230 tcaatgactcgggatagcttctggatgcggttcagcaagaagtccccttgcttgatggtc 289 ||||||||||| || || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 23484968 tcaatgactcgtgacagtttctggatgcggttcagcaagaagtccccttgcttgatggtc 23484909 Query: 290 gactggtagaaagcattcctctcatcaggccggtttgtctccaaaacaccagcgaccttg 349 | |||||||| |||||||| | ||||| ||||||||||||| ||||||||| ||||| Sbjct: 23484908 gcttggtagaaggcattcctagcgtcaggtcggtttgtctccagaacaccagcaacctta 23484849 Query: 350 tcaatcttgcagtgaagcttgccagctgcaat 381 || ||||||||||||||||| ||||||||||| Sbjct: 23484848 tcgatcttgcagtgaagcttcccagctgcaat 23484817 Score = 60.0 bits (30), Expect = 9e-06 Identities = 37/38 (97%), Gaps = 1/38 (2%) Strand = Plus / Minus Query: 567 agaatgcaacaaaaaatgacttgtactgggcaattgta 604 ||||||||||||||||||||||||||| |||||||||| Sbjct: 23484422 agaatgcaacaaaaaatgacttgtact-ggcaattgta 23484386
>dbj|AP005385.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1791_B03 Length = 166214 Score = 194 bits (98), Expect = 2e-46 Identities = 152/170 (89%) Strand = Plus / Minus Query: 397 ctggtctatgaaatcaacagtcacaccaaatgcagaagccatagcttccatcgtcacact 456 ||||||||||||||||||||||||||||||||| | ||||| |||||||| |||||||| Sbjct: 50370 ctggtctatgaaatcaacagtcacaccaaatgctgcggccatcgcttccattgtcacact 50311 Query: 457 cttgtatgactccaaaaactgtgagtagacgacagtgcgcacttccctcatgtagtagcg 516 |||||||||||||||||||||||| ||||| || || |||||||||||||| |||||||| Sbjct: 50310 cttgtatgactccaaaaactgtgaatagacaacggtccgcacttccctcatatagtagcg 50251 Query: 517 gaaatgaggttgaagataacggtctaacttgatctgttccatcaagccag 566 ||||||||| |||||||| || || ||||| ||||| ||| ||| ||||| Sbjct: 50250 gaaatgaggctgaagatagcgatccaacttaatctgctccgtcatgccag 50201 Score = 182 bits (92), Expect = 9e-43 Identities = 137/152 (90%) Strand = Plus / Minus Query: 230 tcaatgactcgggatagcttctggatgcggttcagcaagaagtccccttgcttgatggtc 289 ||||||||||| || || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 50651 tcaatgactcgtgacagtttctggatgcggttcagcaagaagtccccttgcttgatggtc 50592 Query: 290 gactggtagaaagcattcctctcatcaggccggtttgtctccaaaacaccagcgaccttg 349 | |||||||| |||||||| | ||||| ||||||||||||| ||||||||| ||||| Sbjct: 50591 gcttggtagaaggcattcctagcgtcaggtcggtttgtctccagaacaccagcaacctta 50532 Query: 350 tcaatcttgcagtgaagcttgccagctgcaat 381 || ||||||||||||||||| ||||||||||| Sbjct: 50531 tcgatcttgcagtgaagcttcccagctgcaat 50500 Score = 60.0 bits (30), Expect = 9e-06 Identities = 37/38 (97%), Gaps = 1/38 (2%) Strand = Plus / Minus Query: 567 agaatgcaacaaaaaatgacttgtactgggcaattgta 604 ||||||||||||||||||||||||||| |||||||||| Sbjct: 50105 agaatgcaacaaaaaatgacttgtact-ggcaattgta 50069
>dbj|AP005293.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1653_F07, complete sequence Length = 110109 Score = 194 bits (98), Expect = 2e-46 Identities = 152/170 (89%) Strand = Plus / Minus Query: 397 ctggtctatgaaatcaacagtcacaccaaatgcagaagccatagcttccatcgtcacact 456 ||||||||||||||||||||||||||||||||| | ||||| |||||||| |||||||| Sbjct: 103362 ctggtctatgaaatcaacagtcacaccaaatgctgcggccatcgcttccattgtcacact 103303 Query: 457 cttgtatgactccaaaaactgtgagtagacgacagtgcgcacttccctcatgtagtagcg 516 |||||||||||||||||||||||| ||||| || || |||||||||||||| |||||||| Sbjct: 103302 cttgtatgactccaaaaactgtgaatagacaacggtccgcacttccctcatatagtagcg 103243 Query: 517 gaaatgaggttgaagataacggtctaacttgatctgttccatcaagccag 566 ||||||||| |||||||| || || ||||| ||||| ||| ||| ||||| Sbjct: 103242 gaaatgaggctgaagatagcgatccaacttaatctgctccgtcatgccag 103193 Score = 182 bits (92), Expect = 9e-43 Identities = 137/152 (90%) Strand = Plus / Minus Query: 230 tcaatgactcgggatagcttctggatgcggttcagcaagaagtccccttgcttgatggtc 289 ||||||||||| || || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 103643 tcaatgactcgtgacagtttctggatgcggttcagcaagaagtccccttgcttgatggtc 103584 Query: 290 gactggtagaaagcattcctctcatcaggccggtttgtctccaaaacaccagcgaccttg 349 | |||||||| |||||||| | ||||| ||||||||||||| ||||||||| ||||| Sbjct: 103583 gcttggtagaaggcattcctagcgtcaggtcggtttgtctccagaacaccagcaacctta 103524 Query: 350 tcaatcttgcagtgaagcttgccagctgcaat 381 || ||||||||||||||||| ||||||||||| Sbjct: 103523 tcgatcttgcagtgaagcttcccagctgcaat 103492 Score = 60.0 bits (30), Expect = 9e-06 Identities = 37/38 (97%), Gaps = 1/38 (2%) Strand = Plus / Minus Query: 567 agaatgcaacaaaaaatgacttgtactgggcaattgta 604 ||||||||||||||||||||||||||| |||||||||| Sbjct: 103097 agaatgcaacaaaaaatgacttgtact-ggcaattgta 103061
>emb|AL606998.3|OSJN00125 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ000223_09, complete sequence Length = 120583 Score = 182 bits (92), Expect = 9e-43 Identities = 149/168 (88%) Strand = Plus / Minus Query: 399 ggtctatgaaatcaacagtcacaccaaatgcagaagccatagcttccatcgtcacactct 458 |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 40852 ggtctatgaaatcaacggtcacaccaaatgcagaagccattgcttccatcgtcacactct 40793 Query: 459 tgtatgactccaaaaactgtgagtagacgacagtgcgcacttccctcatgtagtagcgga 518 |||| ||||| | || ||||| ||||| ||||| || ||||| | ||||||||| |||| Sbjct: 40792 tgtaggactcgaggaattgtgaatagacaacagtacggacttcacgcatgtagtaacgga 40733 Query: 519 aatgaggttgaagataacggtctaacttgatctgttccatcaagccag 566 ||||||| || || |||||||||||||||||||| ||| ||||||||| Sbjct: 40732 aatgaggctgcaggtaacggtctaacttgatctgctccgtcaagccag 40685 Score = 163 bits (82), Expect = 8e-37 Identities = 139/158 (87%) Strand = Plus / Minus Query: 224 tacagatcaatgactcgggatagcttctggatgcggttcagcaagaagtccccttgcttg 283 ||||| ||||||||||| ||||||||||||||||||||||||| |||||||||||||||| Sbjct: 41131 tacaggtcaatgactcgtgatagcttctggatgcggttcagcaggaagtccccttgcttg 41072 Query: 284 atggtcgactggtagaaagcattcctctcatcaggccggtttgtctccaaaacaccagcg 343 ||||| | ||||||||||||||| || ||||||||||||| ||||||| || | ||| Sbjct: 41071 atggttgcctggtagaaagcatttctggcatcaggccggttcgtctccaggacgcaagca 41012 Query: 344 accttgtcaatcttgcagtgaagcttgccagctgcaat 381 ||||| || ||||||||||| ||||| ||||| ||||| Sbjct: 41011 accttatcgatcttgcagtggagctttccagcagcaat 40974 Score = 44.1 bits (22), Expect = 0.53 Identities = 35/38 (92%), Gaps = 1/38 (2%) Strand = Plus / Minus Query: 567 agaatgcaacaaaaaatgacttgtactgggcaattgta 604 ||||||| |||||||||||||||||| |||||||||| Sbjct: 40557 agaatgcggcaaaaaatgacttgtact-ggcaattgta 40521
>emb|AL606623.3|OSJN00053 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0081L15, complete sequence Length = 150864 Score = 182 bits (92), Expect = 9e-43 Identities = 149/168 (88%) Strand = Plus / Minus Query: 399 ggtctatgaaatcaacagtcacaccaaatgcagaagccatagcttccatcgtcacactct 458 |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 107665 ggtctatgaaatcaacggtcacaccaaatgcagaagccattgcttccatcgtcacactct 107606 Query: 459 tgtatgactccaaaaactgtgagtagacgacagtgcgcacttccctcatgtagtagcgga 518 |||| ||||| | || ||||| ||||| ||||| || ||||| | ||||||||| |||| Sbjct: 107605 tgtaggactcgaggaattgtgaatagacaacagtacggacttcacgcatgtagtaacgga 107546 Query: 519 aatgaggttgaagataacggtctaacttgatctgttccatcaagccag 566 ||||||| || || |||||||||||||||||||| ||| ||||||||| Sbjct: 107545 aatgaggctgcaggtaacggtctaacttgatctgctccgtcaagccag 107498 Score = 163 bits (82), Expect = 8e-37 Identities = 139/158 (87%) Strand = Plus / Minus Query: 224 tacagatcaatgactcgggatagcttctggatgcggttcagcaagaagtccccttgcttg 283 ||||| ||||||||||| ||||||||||||||||||||||||| |||||||||||||||| Sbjct: 107944 tacaggtcaatgactcgtgatagcttctggatgcggttcagcaggaagtccccttgcttg 107885 Query: 284 atggtcgactggtagaaagcattcctctcatcaggccggtttgtctccaaaacaccagcg 343 ||||| | ||||||||||||||| || ||||||||||||| ||||||| || | ||| Sbjct: 107884 atggttgcctggtagaaagcatttctggcatcaggccggttcgtctccaggacgcaagca 107825 Query: 344 accttgtcaatcttgcagtgaagcttgccagctgcaat 381 ||||| || ||||||||||| ||||| ||||| ||||| Sbjct: 107824 accttatcgatcttgcagtggagctttccagcagcaat 107787 Score = 44.1 bits (22), Expect = 0.53 Identities = 35/38 (92%), Gaps = 1/38 (2%) Strand = Plus / Minus Query: 567 agaatgcaacaaaaaatgacttgtactgggcaattgta 604 ||||||| |||||||||||||||||| |||||||||| Sbjct: 107370 agaatgcggcaaaaaatgacttgtact-ggcaattgta 107334
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 182 bits (92), Expect = 9e-43 Identities = 149/168 (88%) Strand = Plus / Minus Query: 399 ggtctatgaaatcaacagtcacaccaaatgcagaagccatagcttccatcgtcacactct 458 |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 24218440 ggtctatgaaatcaacggtcacaccaaatgcagaagccattgcttccatcgtcacactct 24218381 Query: 459 tgtatgactccaaaaactgtgagtagacgacagtgcgcacttccctcatgtagtagcgga 518 |||| ||||| | || ||||| ||||| ||||| || ||||| | ||||||||| |||| Sbjct: 24218380 tgtaggactcgaggaattgtgaatagacaacagtacggacttcacgcatgtagtaacgga 24218321 Query: 519 aatgaggttgaagataacggtctaacttgatctgttccatcaagccag 566 ||||||| || || |||||||||||||||||||| ||| ||||||||| Sbjct: 24218320 aatgaggctgcaggtaacggtctaacttgatctgctccgtcaagccag 24218273 Score = 163 bits (82), Expect = 8e-37 Identities = 139/158 (87%) Strand = Plus / Minus Query: 224 tacagatcaatgactcgggatagcttctggatgcggttcagcaagaagtccccttgcttg 283 ||||| ||||||||||| ||||||||||||||||||||||||| |||||||||||||||| Sbjct: 24218719 tacaggtcaatgactcgtgatagcttctggatgcggttcagcaggaagtccccttgcttg 24218660 Query: 284 atggtcgactggtagaaagcattcctctcatcaggccggtttgtctccaaaacaccagcg 343 ||||| | ||||||||||||||| || ||||||||||||| ||||||| || | ||| Sbjct: 24218659 atggttgcctggtagaaagcatttctggcatcaggccggttcgtctccaggacgcaagca 24218600 Query: 344 accttgtcaatcttgcagtgaagcttgccagctgcaat 381 ||||| || ||||||||||| ||||| ||||| ||||| Sbjct: 24218599 accttatcgatcttgcagtggagctttccagcagcaat 24218562 Score = 44.1 bits (22), Expect = 0.53 Identities = 35/38 (92%), Gaps = 1/38 (2%) Strand = Plus / Minus Query: 567 agaatgcaacaaaaaatgacttgtactgggcaattgta 604 ||||||| |||||||||||||||||| |||||||||| Sbjct: 24218145 agaatgcggcaaaaaatgacttgtact-ggcaattgta 24218109
>emb|AL442114.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0811E11, complete sequence Length = 59348 Score = 182 bits (92), Expect = 9e-43 Identities = 149/168 (88%) Strand = Plus / Minus Query: 399 ggtctatgaaatcaacagtcacaccaaatgcagaagccatagcttccatcgtcacactct 458 |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 12895 ggtctatgaaatcaacggtcacaccaaatgcagaagccattgcttccatcgtcacactct 12836 Query: 459 tgtatgactccaaaaactgtgagtagacgacagtgcgcacttccctcatgtagtagcgga 518 |||| ||||| | || ||||| ||||| ||||| || ||||| | ||||||||| |||| Sbjct: 12835 tgtaggactcgaggaattgtgaatagacaacagtacggacttcacgcatgtagtaacgga 12776 Query: 519 aatgaggttgaagataacggtctaacttgatctgttccatcaagccag 566 ||||||| || || |||||||||||||||||||| ||| ||||||||| Sbjct: 12775 aatgaggctgcaggtaacggtctaacttgatctgctccgtcaagccag 12728 Score = 170 bits (86), Expect = 3e-39 Identities = 140/158 (88%) Strand = Plus / Minus Query: 224 tacagatcaatgactcgggatagcttctggatgcggttcagcaagaagtccccttgcttg 283 ||||| ||||||||||| ||||||||||||||||||||||||| |||||||||||||||| Sbjct: 13174 tacaggtcaatgactcgtgatagcttctggatgcggttcagcaggaagtccccttgcttg 13115 Query: 284 atggtcgactggtagaaagcattcctctcatcaggccggtttgtctccaaaacaccagcg 343 ||||| | ||||||||||||||| || ||||||||||||| ||||||| || ||||| Sbjct: 13114 atggttgcctggtagaaagcatttctggcatcaggccggttcgtctccaggacgccagca 13055 Query: 344 accttgtcaatcttgcagtgaagcttgccagctgcaat 381 ||||| || ||||||||||| ||||| ||||| ||||| Sbjct: 13054 accttatcgatcttgcagtggagctttccagcagcaat 13017 Score = 44.1 bits (22), Expect = 0.53 Identities = 35/38 (92%), Gaps = 1/38 (2%) Strand = Plus / Minus Query: 567 agaatgcaacaaaaaatgacttgtactgggcaattgta 604 ||||||| |||||||||||||||||| |||||||||| Sbjct: 12600 agaatgcggcaaaaaatgacttgtact-ggcaattgta 12564
>ref|NM_118615.2| Arabidopsis thaliana unknown protein AT4G24820 transcript variant AT4G24820.1 mRNA, complete cds Length = 1595 Score = 155 bits (78), Expect = 2e-34 Identities = 228/278 (82%) Strand = Plus / Minus Query: 245 agcttctggatgcggttcagcaagaagtccccttgcttgatggtcgactggtagaaagca 304 ||||||||||| ||||| |||||||| |||||||||||||| || | |||||| | ||| Sbjct: 1265 agcttctggattcggtttagcaagaaatccccttgcttgattgttgcctggtaaagtgca 1206 Query: 305 ttcctctcatcaggccggtttgtctccaaaacaccagcgaccttgtcaatcttgcagtga 364 ||| | ||||||| |||||||||||||||||||| || |||||||| ||||| |||||| Sbjct: 1205 ttctttgcatcaggacggtttgtctccaaaacacctgcaaccttgtctatcttacagtga 1146 Query: 365 agcttgccagctgcaataaaacgagaaagttcctggtctatgaaatcaacagtcacacca 424 ||||| ||||| ||||| || || || | ||||||||||||||||| |||| || ||| Sbjct: 1145 agcttcccagcagcaatgaagcgcgacaactcctggtctatgaaatcgacagaaacgcca 1086 Query: 425 aatgcagaagccatagcttccatcgtcacactcttgtatgactccaaaaactgtgagtag 484 || || ||||| ||||| | |||||||| ||||| || ||||||||||| ||||| Sbjct: 1085 aaggcctttgccattgcttcaactgtcacacttttgtaagattccaaaaactgagagtac 1026 Query: 485 acgacagtgcgcacttccctcatgtagtagcggaaatg 522 || || || | ||||||||||||||| | |||||||| Sbjct: 1025 accactgttctgacttccctcatgtagaaccggaaatg 988
>ref|NM_202882.1| Arabidopsis thaliana unknown protein AT4G24820 transcript variant AT4G24820.2 mRNA, complete cds Length = 1462 Score = 155 bits (78), Expect = 2e-34 Identities = 228/278 (82%) Strand = Plus / Minus Query: 245 agcttctggatgcggttcagcaagaagtccccttgcttgatggtcgactggtagaaagca 304 ||||||||||| ||||| |||||||| |||||||||||||| || | |||||| | ||| Sbjct: 1265 agcttctggattcggtttagcaagaaatccccttgcttgattgttgcctggtaaagtgca 1206 Query: 305 ttcctctcatcaggccggtttgtctccaaaacaccagcgaccttgtcaatcttgcagtga 364 ||| | ||||||| |||||||||||||||||||| || |||||||| ||||| |||||| Sbjct: 1205 ttctttgcatcaggacggtttgtctccaaaacacctgcaaccttgtctatcttacagtga 1146 Query: 365 agcttgccagctgcaataaaacgagaaagttcctggtctatgaaatcaacagtcacacca 424 ||||| ||||| ||||| || || || | ||||||||||||||||| |||| || ||| Sbjct: 1145 agcttcccagcagcaatgaagcgcgacaactcctggtctatgaaatcgacagaaacgcca 1086 Query: 425 aatgcagaagccatagcttccatcgtcacactcttgtatgactccaaaaactgtgagtag 484 || || ||||| ||||| | |||||||| ||||| || ||||||||||| ||||| Sbjct: 1085 aaggcctttgccattgcttcaactgtcacacttttgtaagattccaaaaactgagagtac 1026 Query: 485 acgacagtgcgcacttccctcatgtagtagcggaaatg 522 || || || | ||||||||||||||| | |||||||| Sbjct: 1025 accactgttctgacttccctcatgtagaaccggaaatg 988
>gb|AY230838.1| Arabidopsis thaliana 26S proteasome subunit RPN7 (RPN7) mRNA, complete cds Length = 1421 Score = 155 bits (78), Expect = 2e-34 Identities = 228/278 (82%) Strand = Plus / Minus Query: 245 agcttctggatgcggttcagcaagaagtccccttgcttgatggtcgactggtagaaagca 304 ||||||||||| ||||| |||||||| |||||||||||||| || | |||||| | ||| Sbjct: 1175 agcttctggattcggtttagcaagaaatccccttgcttgattgttgcctggtaaagtgca 1116 Query: 305 ttcctctcatcaggccggtttgtctccaaaacaccagcgaccttgtcaatcttgcagtga 364 ||| | ||||||| |||||||||||||||||||| || |||||||| ||||| |||||| Sbjct: 1115 ttctttgcatcaggacggtttgtctccaaaacacctgcaaccttgtctatcttacagtga 1056 Query: 365 agcttgccagctgcaataaaacgagaaagttcctggtctatgaaatcaacagtcacacca 424 ||||| ||||| ||||| || || || | ||||||||||||||||| |||| || ||| Sbjct: 1055 agcttcccagcagcaatgaagcgcgacaactcctggtctatgaaatcgacagaaacgcca 996 Query: 425 aatgcagaagccatagcttccatcgtcacactcttgtatgactccaaaaactgtgagtag 484 || || ||||| ||||| | |||||||| ||||| || ||||||||||| ||||| Sbjct: 995 aaggcctttgccattgcttcaactgtcacacttttgtaagattccaaaaactgagagtac 936 Query: 485 acgacagtgcgcacttccctcatgtagtagcggaaatg 522 || || || | ||||||||||||||| | |||||||| Sbjct: 935 accactgttctgacttccctcatgtagaaccggaaatg 898
>gb|BT011969.1| Arabidopsis thaliana At4g24820 mRNA sequence Length = 1161 Score = 155 bits (78), Expect = 2e-34 Identities = 228/278 (82%) Strand = Plus / Minus Query: 245 agcttctggatgcggttcagcaagaagtccccttgcttgatggtcgactggtagaaagca 304 ||||||||||| ||||| |||||||| |||||||||||||| || | |||||| | ||| Sbjct: 1139 agcttctggattcggtttagcaagaaatccccttgcttgattgttgcctggtaaagtgca 1080 Query: 305 ttcctctcatcaggccggtttgtctccaaaacaccagcgaccttgtcaatcttgcagtga 364 ||| | ||||||| |||||||||||||||||||| || |||||||| ||||| |||||| Sbjct: 1079 ttctttgcatcaggacggtttgtctccaaaacacctgcaaccttgtctatcttacagtga 1020 Query: 365 agcttgccagctgcaataaaacgagaaagttcctggtctatgaaatcaacagtcacacca 424 ||||| ||||| ||||| || || || | ||||||||||||||||| |||| || ||| Sbjct: 1019 agcttcccagcagcaatgaagcgcgacaactcctggtctatgaaatcgacagaaacgcca 960 Query: 425 aatgcagaagccatagcttccatcgtcacactcttgtatgactccaaaaactgtgagtag 484 || || ||||| ||||| | |||||||| ||||| || ||||||||||| ||||| Sbjct: 959 aaggcctttgccattgcttcaactgtcacacttttgtaagattccaaaaactgagagtac 900 Query: 485 acgacagtgcgcacttccctcatgtagtagcggaaatg 522 || || || | ||||||||||||||| | |||||||| Sbjct: 899 accactgttctgacttccctcatgtagaaccggaaatg 862
>gb|BT000653.1| Arabidopsis thaliana clone RAFL05-08-I15 (R09884) putative proteasome regulatory subunit (At4g24820) mRNA, complete cds Length = 1443 Score = 155 bits (78), Expect = 2e-34 Identities = 228/278 (82%) Strand = Plus / Minus Query: 245 agcttctggatgcggttcagcaagaagtccccttgcttgatggtcgactggtagaaagca 304 ||||||||||| ||||| |||||||| |||||||||||||| || | |||||| | ||| Sbjct: 1192 agcttctggattcggtttagcaagaaatccccttgcttgattgttgcctggtaaagtgca 1133 Query: 305 ttcctctcatcaggccggtttgtctccaaaacaccagcgaccttgtcaatcttgcagtga 364 ||| | ||||||| |||||||||||||||||||| || |||||||| ||||| |||||| Sbjct: 1132 ttctttgcatcaggacggtttgtctccaaaacacctgcaaccttgtctatcttacagtga 1073 Query: 365 agcttgccagctgcaataaaacgagaaagttcctggtctatgaaatcaacagtcacacca 424 ||||| ||||| ||||| || || || | ||||||||||||||||| |||| || ||| Sbjct: 1072 agcttcccagcagcaatgaagcgcgacaactcctggtctatgaaatcgacagaaacgcca 1013 Query: 425 aatgcagaagccatagcttccatcgtcacactcttgtatgactccaaaaactgtgagtag 484 || || ||||| ||||| | |||||||| ||||| || ||||||||||| ||||| Sbjct: 1012 aaggcctttgccattgcttcaactgtcacacttttgtaagattccaaaaactgagagtac 953 Query: 485 acgacagtgcgcacttccctcatgtagtagcggaaatg 522 || || || | ||||||||||||||| | |||||||| Sbjct: 952 accactgttctgacttccctcatgtagaaccggaaatg 915
>gb|AY093269.1| Arabidopsis thaliana putative proteasome regulatory subunit (At4g24820) mRNA, complete cds Length = 1446 Score = 155 bits (78), Expect = 2e-34 Identities = 228/278 (82%) Strand = Plus / Minus Query: 245 agcttctggatgcggttcagcaagaagtccccttgcttgatggtcgactggtagaaagca 304 ||||||||||| ||||| |||||||| |||||||||||||| || | |||||| | ||| Sbjct: 1142 agcttctggattcggtttagcaagaaatccccttgcttgattgttgcctggtaaagtgca 1083 Query: 305 ttcctctcatcaggccggtttgtctccaaaacaccagcgaccttgtcaatcttgcagtga 364 ||| | ||||||| |||||||||||||||||||| || |||||||| ||||| |||||| Sbjct: 1082 ttctttgcatcaggacggtttgtctccaaaacacctgcaaccttgtctatcttacagtga 1023 Query: 365 agcttgccagctgcaataaaacgagaaagttcctggtctatgaaatcaacagtcacacca 424 ||||| ||||| ||||| || || || | ||||||||||||||||| |||| || ||| Sbjct: 1022 agcttcccagcagcaatgaagcgcgacaactcctggtctatgaaatcgacagaaacgcca 963 Query: 425 aatgcagaagccatagcttccatcgtcacactcttgtatgactccaaaaactgtgagtag 484 || || ||||| ||||| | |||||||| ||||| || ||||||||||| ||||| Sbjct: 962 aaggcctttgccattgcttcaactgtcacacttttgtaagattccaaaaactgagagtac 903 Query: 485 acgacagtgcgcacttccctcatgtagtagcggaaatg 522 || || || | ||||||||||||||| | |||||||| Sbjct: 902 accactgttctgacttccctcatgtagaaccggaaatg 865
>gb|AY054500.1| Arabidopsis thaliana putative proteasome regulatory subunit (At4g24820; F6I7.30) mRNA, complete cds Length = 1595 Score = 155 bits (78), Expect = 2e-34 Identities = 228/278 (82%) Strand = Plus / Minus Query: 245 agcttctggatgcggttcagcaagaagtccccttgcttgatggtcgactggtagaaagca 304 ||||||||||| ||||| |||||||| |||||||||||||| || | |||||| | ||| Sbjct: 1265 agcttctggattcggtttagcaagaaatccccttgcttgattgttgcctggtaaagtgca 1206 Query: 305 ttcctctcatcaggccggtttgtctccaaaacaccagcgaccttgtcaatcttgcagtga 364 ||| | ||||||| |||||||||||||||||||| || |||||||| ||||| |||||| Sbjct: 1205 ttctttgcatcaggacggtttgtctccaaaacacctgcaaccttgtctatcttacagtga 1146 Query: 365 agcttgccagctgcaataaaacgagaaagttcctggtctatgaaatcaacagtcacacca 424 ||||| ||||| ||||| || || || | ||||||||||||||||| |||| || ||| Sbjct: 1145 agcttcccagcagcaatgaagcgcgacaactcctggtctatgaaatcgacagaaacgcca 1086 Query: 425 aatgcagaagccatagcttccatcgtcacactcttgtatgactccaaaaactgtgagtag 484 || || ||||| ||||| | |||||||| ||||| || ||||||||||| ||||| Sbjct: 1085 aaggcctttgccattgcttcaactgtcacacttttgtaagattccaaaaactgagagtac 1026 Query: 485 acgacagtgcgcacttccctcatgtagtagcggaaatg 522 || || || | ||||||||||||||| | |||||||| Sbjct: 1025 accactgttctgacttccctcatgtagaaccggaaatg 988
>gb|AY087847.1| Arabidopsis thaliana clone 38927 mRNA, complete sequence Length = 1482 Score = 155 bits (78), Expect = 2e-34 Identities = 228/278 (82%) Strand = Plus / Minus Query: 245 agcttctggatgcggttcagcaagaagtccccttgcttgatggtcgactggtagaaagca 304 ||||||||||| ||||| |||||||| |||||||||||||| || | |||||| | ||| Sbjct: 1245 agcttctggattcggtttagcaagaaatccccttgcttgattgttgcctggtaaagtgca 1186 Query: 305 ttcctctcatcaggccggtttgtctccaaaacaccagcgaccttgtcaatcttgcagtga 364 ||| | ||||||| |||||||||||||||||||| || |||||||| ||||| |||||| Sbjct: 1185 ttctttgcatcaggacggtttgtctccaaaacacctgcaaccttgtctatcttacagtga 1126 Query: 365 agcttgccagctgcaataaaacgagaaagttcctggtctatgaaatcaacagtcacacca 424 ||||| ||||| ||||| || || || | ||||||||||||||||| |||| || ||| Sbjct: 1125 agcttcccagcagcaatgaagcgcgacaactcctggtctatgaaatcgacagaaacgcca 1066 Query: 425 aatgcagaagccatagcttccatcgtcacactcttgtatgactccaaaaactgtgagtag 484 || || ||||| ||||| | |||||||| ||||| || ||||||||||| ||||| Sbjct: 1065 aaggcctttgccattgcttcaactgtcacacttttgtaagattccaaaaactgagagtac 1006 Query: 485 acgacagtgcgcacttccctcatgtagtagcggaaatg 522 || || || | ||||||||||||||| | |||||||| Sbjct: 1005 accactgttctgacttccctcatgtagaaccggaaatg 968
>emb|AL161562.2|ATCHRIV62 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 62 Length = 197070 Score = 121 bits (61), Expect = 3e-24 Identities = 118/137 (86%) Strand = Plus / Plus Query: 245 agcttctggatgcggttcagcaagaagtccccttgcttgatggtcgactggtagaaagca 304 ||||||||||| ||||| |||||||| |||||||||||||| || | |||||| | ||| Sbjct: 64799 agcttctggattcggtttagcaagaaatccccttgcttgattgttgcctggtaaagtgca 64858 Query: 305 ttcctctcatcaggccggtttgtctccaaaacaccagcgaccttgtcaatcttgcagtga 364 ||| | ||||||| |||||||||||||||||||| || |||||||| ||||| |||||| Sbjct: 64859 ttctttgcatcaggacggtttgtctccaaaacacctgcaaccttgtctatcttacagtga 64918 Query: 365 agcttgccagctgcaat 381 ||||| ||||| ||||| Sbjct: 64919 agcttcccagcagcaat 64935 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Plus Query: 449 gtcacactcttgtatgactccaaaaactgtgagtagacgacagtgcgcacttccctcatg 508 |||||||| ||||| || ||||||||||| ||||| || || || | |||||||||||| Sbjct: 65124 gtcacacttttgtaagattccaaaaactgagagtacaccactgttctgacttccctcatg 65183 Query: 509 tagtagcggaaatg 522 ||| | |||||||| Sbjct: 65184 tagaaccggaaatg 65197
>emb|AL049657.1|ATF6I7 Arabidopsis thaliana DNA chromosome 4, BAC clone F6I7 (ESSA project) Length = 95185 Score = 121 bits (61), Expect = 3e-24 Identities = 118/137 (86%) Strand = Plus / Plus Query: 245 agcttctggatgcggttcagcaagaagtccccttgcttgatggtcgactggtagaaagca 304 ||||||||||| ||||| |||||||| |||||||||||||| || | |||||| | ||| Sbjct: 35375 agcttctggattcggtttagcaagaaatccccttgcttgattgttgcctggtaaagtgca 35434 Query: 305 ttcctctcatcaggccggtttgtctccaaaacaccagcgaccttgtcaatcttgcagtga 364 ||| | ||||||| |||||||||||||||||||| || |||||||| ||||| |||||| Sbjct: 35435 ttctttgcatcaggacggtttgtctccaaaacacctgcaaccttgtctatcttacagtga 35494 Query: 365 agcttgccagctgcaat 381 ||||| ||||| ||||| Sbjct: 35495 agcttcccagcagcaat 35511 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Plus Query: 449 gtcacactcttgtatgactccaaaaactgtgagtagacgacagtgcgcacttccctcatg 508 |||||||| ||||| || ||||||||||| ||||| || || || | |||||||||||| Sbjct: 35700 gtcacacttttgtaagattccaaaaactgagagtacaccactgttctgacttccctcatg 35759 Query: 509 tagtagcggaaatg 522 ||| | |||||||| Sbjct: 35760 tagaaccggaaatg 35773
>emb|BX828527.1|CNS0A4CR Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL13ZB05 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1332 Score = 117 bits (59), Expect = 4e-23 Identities = 173/211 (81%) Strand = Plus / Minus Query: 312 catcaggccggtttgtctccaaaacaccagcgaccttgtcaatcttgcagtgaagcttgc 371 ||||||| |||||||||||||||||||| || |||||||| ||||| ||||||||||| | Sbjct: 1096 catcaggacggtttgtctccaaaacacctgcaaccttgtctatcttacagtgaagcttcc 1037 Query: 372 cagctgcaataaaacgagaaagttcctggtctatgaaatcaacagtcacaccaaatgcag 431 |||| ||||| || || || | ||||||||||||||||| |||| || ||||| || Sbjct: 1036 cagcagcaatgaagcgcgacaactcctggtctatgaaatcgacagaaacgccaaaggcct 977 Query: 432 aagccatagcttccatcgtcacactcttgtatgactccaaaaactgtgagtagacgacag 491 ||||| ||||| | |||||||| ||||| || ||||||||||| ||||| || || | Sbjct: 976 ttgccattgcttcaactgtcacacttttgtaagattccaaaaactgagagtacaccactg 917 Query: 492 tgcgcacttccctcatgtagtagcggaaatg 522 | | ||||||||||||||| | |||||||| Sbjct: 916 ttctgacttccctcatgtagaaccggaaatg 886
>gb|BT014513.1| Lycopersicon esculentum clone 133900F, mRNA sequence Length = 1278 Score = 81.8 bits (41), Expect = 2e-12 Identities = 149/185 (80%) Strand = Plus / Minus Query: 227 agatcaatgactcgggatagcttctggatgcggttcagcaagaagtccccttgcttgatg 286 ||||||||||| || || ||||| || ||||| |||| ||||||||||||||||||||| Sbjct: 1117 agatcaatgacacgagaaagcttttgaatgcgattcaacaagaagtccccttgcttgata 1058 Query: 287 gtcgactggtagaaagcattcctctcatcaggccggtttgtctccaaaacaccagcgacc 346 || | ||| || | ||||||| | ||||||| || || || ||||| || || || || Sbjct: 1057 gttgcctgataaagagcattctttgcatcaggacgattagtttccaatactcctgctact 998 Query: 347 ttgtcaatcttgcagtgaagcttgccagctgcaataaaacgagaaagttcctggtctatg 406 || ||||||||||| || | ||| ||||||||||| || ||||| |||||| ||| ||| Sbjct: 997 ttatcaatcttgcaatgcaacttcccagctgcaatgaaccgagatagttccaagtcgatg 938 Query: 407 aaatc 411 ||||| Sbjct: 937 aaatc 933
>gb|AF051233.1|AF051233 Picea mariana KIAA0107-like protein (Sb46) mRNA, partial cds Length = 980 Score = 73.8 bits (37), Expect = 6e-10 Identities = 226/289 (78%) Strand = Plus / Minus Query: 219 acttttacagatcaatgactcgggatagcttctggatgcggttcagcaagaagtcccctt 278 ||||||| || ||||| |||| ||| |||||||| |||||||||| ||| ||||| |||| Sbjct: 703 acttttaaaggtcaattactctggagagcttctgaatgcggttcaacaaaaagtctcctt 644 Query: 279 gcttgatggtcgactggtagaaagcattcctctcatcaggccggtttgtctccaaaacac 338 |||| || || | || || | |||||| || |||| |||| ||| || || | ||||| Sbjct: 643 gcttaatagttgcttgataaagagcatttttcgcatctggcctgttagtttctagaacac 584 Query: 339 cagcgaccttgtcaatcttgcagtgaagcttgccagctgcaataaaacgagaaagttcct 398 || | || || || || |||||||||||| | || || || || |||||||| |||||| Sbjct: 583 caacaactttatctattttgcagtgaagcctacctgcggctatgaaacgagagagttccc 524 Query: 399 ggtctatgaaatcaacagtcacaccaaatgcagaagccatagcttccatcgtcacactct 458 ||| || ||||||||| | |||||||| || |||||||||||||| || ||||||| Sbjct: 523 tgtcaataaaatcaacactaacaccaaaagctcttgccatagcttccatggttacactct 464 Query: 459 tgtatgactccaaaaactgtgagtagacgacagtgcgcacttccctcat 507 |||| || || | |||||| || || || ||||| || ||||| ||||| Sbjct: 463 tgtaggattctagaaactgagaatacacaacagtacggacttctctcat 415
>emb|BX829322.1|CNS0A3GW Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL91ZF12 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 487 Score = 65.9 bits (33), Expect = 1e-07 Identities = 63/73 (86%) Strand = Plus / Minus Query: 312 catcaggccggtttgtctccaaaacaccagcgaccttgtcaatcttgcagtgaagcttgc 371 ||||||| |||||||||||||||| ||| || ||||||| || || ||||||||||| | Sbjct: 86 catcaggacggtttgtctccaaaaaacctgcaaccttgtttattttacagtgaagcttcc 27 Query: 372 cagctgcaataaa 384 |||| |||||||| Sbjct: 26 cagcagcaataaa 14
>gb|DQ087931.1| Larix potaninii probable 26S proteasome regulatory subunit (sb46) gene, partial cds Length = 882 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/77 (83%) Strand = Plus / Minus Query: 434 gccatagcttccatcgtcacactcttgtatgactccaaaaactgtgagtagacgacagtg 493 |||||||| ||||| || ||||||||||| || || | |||||| || || || |||||| Sbjct: 316 gccatagcctccatggttacactcttgtaggattctagaaactgagaatatacaacagtg 257 Query: 494 cgcacttccctcatgta 510 || ||||| |||||||| Sbjct: 256 cggacttctctcatgta 240
>gb|DQ087930.1| Larix griffithiana probable 26S proteasome regulatory subunit (sb46) gene, partial cds Length = 861 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/77 (83%) Strand = Plus / Minus Query: 434 gccatagcttccatcgtcacactcttgtatgactccaaaaactgtgagtagacgacagtg 493 |||||||| ||||| || ||||||||||| || || | |||||| || || || |||||| Sbjct: 316 gccatagcctccatggttacactcttgtaggattctagaaactgagaatatacaacagtg 257 Query: 494 cgcacttccctcatgta 510 || ||||| |||||||| Sbjct: 256 cggacttctctcatgta 240
>gb|DQ087929.1| Larix mastersiana probable 26S proteasome regulatory subunit (sb46) gene, partial cds Length = 882 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/77 (83%) Strand = Plus / Minus Query: 434 gccatagcttccatcgtcacactcttgtatgactccaaaaactgtgagtagacgacagtg 493 |||||||| ||||| || ||||||||||| || || | |||||| || || || |||||| Sbjct: 316 gccatagcctccatggttacactcttgtaggattctagaaactgagaatatacaacagtg 257 Query: 494 cgcacttccctcatgta 510 || ||||| |||||||| Sbjct: 256 cggacttctctcatgta 240
>gb|DQ087928.1| Larix gmelinii probable 26S proteasome regulatory subunit (sb46) gene, partial cds Length = 882 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/77 (83%) Strand = Plus / Minus Query: 434 gccatagcttccatcgtcacactcttgtatgactccaaaaactgtgagtagacgacagtg 493 |||||||| ||||| || ||||||||||| || || | |||||| || || || |||||| Sbjct: 316 gccatagcctccatggttacactcttgtaggattctagaaactgagaatatacaacagtg 257 Query: 494 cgcacttccctcatgta 510 || ||||| |||||||| Sbjct: 256 cggacttctctcatgta 240
>gb|DQ087927.1| Larix occidentalis probable 26S proteasome regulatory subunit (sb46) gene, partial cds Length = 882 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/77 (83%) Strand = Plus / Minus Query: 434 gccatagcttccatcgtcacactcttgtatgactccaaaaactgtgagtagacgacagtg 493 |||||||| ||||| || ||||||||||| || || | |||||| || || || |||||| Sbjct: 316 gccatagcctccatggttacactcttgtaggattctagaaactgagaatatacaacagtg 257 Query: 494 cgcacttccctcatgta 510 || ||||| |||||||| Sbjct: 256 cggacttctctcatgta 240
>gb|DQ087926.1| Larix lyallii probable 26S proteasome regulatory subunit (sb46) gene, partial cds Length = 882 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/77 (83%) Strand = Plus / Minus Query: 434 gccatagcttccatcgtcacactcttgtatgactccaaaaactgtgagtagacgacagtg 493 |||||||| ||||| || ||||||||||| || || | |||||| || || || |||||| Sbjct: 316 gccatagcctccatggttacactcttgtaggattctagaaactgcgaatacacaacagtg 257 Query: 494 cgcacttccctcatgta 510 || ||||| |||||||| Sbjct: 256 cggacttctctcatgta 240
>gb|DQ087925.1| Larix sibirica probable 26S proteasome regulatory subunit (sb46) gene, partial cds Length = 889 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/77 (83%) Strand = Plus / Minus Query: 434 gccatagcttccatcgtcacactcttgtatgactccaaaaactgtgagtagacgacagtg 493 |||||||| ||||| || ||||||||||| || || | |||||| || || || |||||| Sbjct: 316 gccatagcctccatggttacactcttgtaggattctagaaactgagaatatacaacagtg 257 Query: 494 cgcacttccctcatgta 510 || ||||| |||||||| Sbjct: 256 cggacttctctcatgta 240
>gb|DQ087924.1| Larix kaempferi probable 26S proteasome regulatory subunit (sb46) gene, partial cds Length = 882 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/77 (83%) Strand = Plus / Minus Query: 434 gccatagcttccatcgtcacactcttgtatgactccaaaaactgtgagtagacgacagtg 493 |||||||| ||||| || ||||||||||| || || | |||||| || || || |||||| Sbjct: 316 gccatagcctccatggttacactcttgtaggattctagaaactgagaatatacaacagtg 257 Query: 494 cgcacttccctcatgta 510 || ||||| |||||||| Sbjct: 256 cggacttctctcatgta 240
>gb|DQ087923.1| Larix decidua probable 26S proteasome regulatory subunit (sb46) gene, partial cds Length = 882 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/77 (83%) Strand = Plus / Minus Query: 434 gccatagcttccatcgtcacactcttgtatgactccaaaaactgtgagtagacgacagtg 493 |||||||| ||||| || ||||||||||| || || | |||||| || || || |||||| Sbjct: 316 gccatagcctccatggttacactcttgtaggattctagaaactgagaatatacaacagtg 257 Query: 494 cgcacttccctcatgta 510 || ||||| |||||||| Sbjct: 256 cggacttctctcatgta 240
>gb|DQ087922.1| Larix laricina probable 26S proteasome regulatory subunit (sb46) gene, partial cds Length = 882 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/77 (83%) Strand = Plus / Minus Query: 434 gccatagcttccatcgtcacactcttgtatgactccaaaaactgtgagtagacgacagtg 493 |||||||| ||||| || ||||||||||| || || | |||||| || || || |||||| Sbjct: 316 gccatagcctccatggttacactcttgtaggattctagaaactgagaatatacaacagtg 257 Query: 494 cgcacttccctcatgta 510 || ||||| |||||||| Sbjct: 256 cggacttctctcatgta 240
>gb|AC097469.2| Homo sapiens BAC clone RP11-55N4 from 4, complete sequence Length = 191883 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 203 tccaacaagaacagcaactttta 225 ||||||||||||||||||||||| Sbjct: 70063 tccaacaagaacagcaactttta 70041
>gb|AC135015.3| Mus musculus BAC clone RP24-227L14 from 8, complete sequence Length = 169193 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 295 gtagaaagcattcctctcatc 315 ||||||||||||||||||||| Sbjct: 109761 gtagaaagcattcctctcatc 109781
>gb|AC166055.5| Mus musculus BAC clone RP23-462B19 from chromosome 9, complete sequence Length = 180798 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 tttgctgggtcagagctcca 206 |||||||||||||||||||| Sbjct: 107947 tttgctgggtcagagctcca 107928
>gb|AC159502.12| Mus musculus 10 BAC RP23-113B7 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 226276 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 438 tagcttccatcgtcacactc 457 |||||||||||||||||||| Sbjct: 159971 tagcttccatcgtcacactc 159952
>emb|Z81033.1|CEC03C11 Caenorhabditis elegans Cosmid C03C11, complete sequence Length = 19170 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 411 caacagtcacaccaaatgcagaag 434 |||| ||||||||||||||||||| Sbjct: 11514 caacggtcacaccaaatgcagaag 11491
>gb|AC163290.2| Mus musculus BAC clone RP23-270I16 from chromosome 9, complete sequence Length = 195649 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 554 tccatcaagccagagaatgc 573 |||||||||||||||||||| Sbjct: 59159 tccatcaagccagagaatgc 59178
>gb|AC162800.2| Mus musculus BAC clone RP24-173D2 from chromosome 17, complete sequence Length = 199202 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 572 gcaacaaaaaatgacttgta 591 |||||||||||||||||||| Sbjct: 95869 gcaacaaaaaatgacttgta 95888
>emb|AL353662.19| Human DNA sequence from clone RP11-571F15 on chromosome 9 Contains the UBAP gene for ubiquitin associated protein, the gene for a novel protein similar to kinesin-like proteins, the KIF24 gene for kinesin family member 24 (FLJ10933), ribosomal protein S8 (RPS8) and L35A (RPL35A) pseudogenes, a serine (or cysteine) proteinase inhibitor (collagen binding protein 1) (SERPINH1) pseudogene, the 5' end of the NUDT2 gene for nudix (nucleoside diphosphate linked moiety X)-type motif 2 and three CpG islands, complete sequence Length = 167998 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 419 acaccaaatgcagaagccat 438 |||||||||||||||||||| Sbjct: 7314 acaccaaatgcagaagccat 7295
>emb|AL136116.11| Human DNA sequence from clone RP1-95L4 on chromosome 6 Contains the 3' end of the gene for androgen induced protein (AIG-1) (CGI-103) (includes FLJ10485), a pseudogene similar to actin genes, a ribosomal protein L31 (RPL31) pseudogene and a pseudogene similar to hypothetical proteins PRO2207 and similar to presenilins associated rhomboid-like protein, complete sequence Length = 100815 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 agaaagcattcctctcatca 316 |||||||||||||||||||| Sbjct: 19800 agaaagcattcctctcatca 19819
>gb|AF375668.1| Sus scrofa microsatellite UMNp35 sequence Length = 497 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 516 ggaaatgaggttgaagataa 535 |||||||||||||||||||| Sbjct: 38 ggaaatgaggttgaagataa 19
>gb|AC009711.10| Homo sapiens chromosome 15, clone RP11-356B18, complete sequence Length = 205925 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 78 ttcatagtaattcatacaag 97 |||||||||||||||||||| Sbjct: 113653 ttcatagtaattcatacaag 113672
>gb|AC175055.3| Mus musculus BAC clone RP24-233C1 from chromosome y, complete sequence Length = 173578 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 268 gaagtccccttgcttgatgg 287 |||||||||||||||||||| Sbjct: 171883 gaagtccccttgcttgatgg 171864
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 461 tatgactccaaaaactgtga 480 |||||||||||||||||||| Sbjct: 15868521 tatgactccaaaaactgtga 15868540
>gb|AC124905.3| Equus caballus clone CH241-184O19, complete sequence Length = 171209 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 570 atgcaacaaaaaatgacttg 589 |||||||||||||||||||| Sbjct: 22292 atgcaacaaaaaatgacttg 22311
>dbj|AP004735.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0031P18 Length = 156535 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 461 tatgactccaaaaactgtga 480 |||||||||||||||||||| Sbjct: 1970 tatgactccaaaaactgtga 1989
>dbj|AP004734.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0026P23 Length = 180188 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 461 tatgactccaaaaactgtga 480 |||||||||||||||||||| Sbjct: 81524 tatgactccaaaaactgtga 81543
>gb|CP000033.1| Lactobacillus acidophilus NCFM, complete genome Length = 1993564 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 411 caacagtcacaccaaatgca 430 |||||||||||||||||||| Sbjct: 1026084 caacagtcacaccaaatgca 1026065
>emb|CR792419.10| Zebrafish DNA sequence from clone DKEY-11A2 in linkage group 3, complete sequence Length = 61995 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 117 caacaaagccaggcactggc 136 |||||||||||||||||||| Sbjct: 43909 caacaaagccaggcactggc 43928
>gb|AC134456.4| Mus musculus BAC clone RP23-335J2 from chromosome 9, complete sequence Length = 186487 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 554 tccatcaagccagagaatgc 573 |||||||||||||||||||| Sbjct: 140948 tccatcaagccagagaatgc 140967
>gb|AF051374.1|AF051374 Fusobacterium nucleatum adenylosuccinate synthetase (purA), FnuDI restriction endonuclease (fnuDIR), and FnuDI DNA modification methyltransferase (fnuDIM) genes, complete cds Length = 4241 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 345 ccttgtcaatcttgcagtgaagct 368 |||||||||||||| ||||||||| Sbjct: 3056 ccttgtcaatcttggagtgaagct 3079
>gb|DP000020.1| Equus caballus target 1 genomic scaffold Length = 1907055 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 570 atgcaacaaaaaatgacttg 589 |||||||||||||||||||| Sbjct: 1654936 atgcaacaaaaaatgacttg 1654955 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,837,767 Number of Sequences: 3902068 Number of extensions: 4837767 Number of successful extensions: 85500 Number of sequences better than 10.0: 60 Number of HSP's better than 10.0 without gapping: 60 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 85300 Number of HSP's gapped (non-prelim): 198 length of query: 608 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 585 effective length of database: 17,143,297,704 effective search space: 10028829156840 effective search space used: 10028829156840 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)