>FAT_DROME (P33450) Cadherin-related tumor suppressor precursor (Protein fat)|
          Length = 5147

 Score = 28.9 bits (63), Expect(2) = 0.087
 Identities = 16/47 (34%), Positives = 22/47 (46%)
 Frame = +1

Query: 100  QGEMTKPTPRCQ*LTKDQTFTTKLHPASIYSKALPQLLLLNTSSGRP 240
            QG    P P     T   T   +L P+S  S   P++L L+  SG+P
Sbjct: 4816 QGGQPPPPPTSASRTHQSTPLARLSPSSELSSQQPRILTLHDISGKP 4862



 Score = 25.8 bits (55), Expect(2) = 0.087
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +3

Query: 15   EQQMFQHTLPFITRDLG 65
            +QQ  +HT PF+TR+ G
Sbjct: 4801 QQQQHRHTAPFVTRNQG 4817

>RPOC1_ODOSI (P49467) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (PEP)|
           (Plastid-encoded RNA polymerase beta' subunit) (RNA
           polymerase beta' subunit)
          Length = 843

 Score = 30.0 bits (66), Expect = 5.6
 Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 6/43 (13%)
 Frame = +2

Query: 275 LHFIGLHQATQQ------LVFSIYSLYPEASSTLSNLRYGTPQ 385
           + + GLH   QQ      L F+ Y L PE    L N RY TP+
Sbjct: 330 ISYYGLHWDLQQYRRSRELGFTAYPLKPEPKPKLQNRRYNTPK 372

>TRPS1_MOUSE (Q925H1) Zinc finger transcription factor Trps1|
          Length = 1281

 Score = 29.3 bits (64), Expect = 9.5
 Identities = 19/67 (28%), Positives = 25/67 (37%)
 Frame = +1

Query: 262 IFHYATLHRSPSSDATISLQHLLSIPRGVINTVQSPVWNTSDSQSCFHQSTKSDCSR*SA 441
           +FHY T+H S +SD      HLL                 SD Q     S +  C++   
Sbjct: 630 LFHYETVHESQASDVKQEANHLLG----------------SDGQQAVRDSKEHSCTKCDF 673

Query: 442 IVGSIEE 462
           I    EE
Sbjct: 674 ITQVEEE 680


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 87,662,271
Number of Sequences: 219361
Number of extensions: 1782872
Number of successful extensions: 4118
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3994
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4118
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5481822624
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)