ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags11o18 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009083.1| Triticum aestivum clone wkm1c.pk0004.c7:fis, full insert mRNA sequence Length = 1186 Score = 357 bits (180), Expect = 3e-95 Identities = 247/268 (92%), Gaps = 1/268 (0%) Strand = Plus / Minus Query: 136 tatttattgttattactctcaactgggccctgaaagtttgtccatagataacaagtgcct 195 |||||||| | ||||||| ||||| |||||||||||||||||||||||| | |||||| Sbjct: 869 tatttattatcattactcgaaactgaaccctgaaagtttgtccatagataataggtgcct 810 Query: 196 tctccttttcaaaaggaaaagaagaatgtccgcgcaaatgattatgcctccgcgttcctg 255 ||||||||||||||||| |||||||||||| |||||||||||||||||||||| |||||| Sbjct: 809 tctccttttcaaaaggacaagaagaatgtctgcgcaaatgattatgcctccgcattcctg 750 Query: 256 ggtattggtacccctaaccctgctgtcaggactttgtatgcgttctggatttgtcttgtg 315 || |||| ||| || ||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 749 ggaattgttactcccaaccctgctgtcaggactttgtatgcgctctggatttgtcttgtg 690 Query: 316 actggaccgattttcgcatcaccaatttcacgcccgtcaatcatcacaacccggtgtaat 375 || ||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 689 accagaccgattttcccatcaccaatttcacgcccgtcaatcatcacaa-ccggtgtaat 631 Query: 376 ttcgcccattgttccggttgtccacacc 403 ||| |||||||||||||||||||||||| Sbjct: 630 ttcacccattgttccggttgtccacacc 603 Score = 143 bits (72), Expect = 8e-31 Identities = 105/116 (90%) Strand = Plus / Minus Query: 11 acaggttcggcgcacacacgcacacaataaatcatgaatccatagacccaacaagtattt 70 |||||||||||||||||| ||||||| |||||||||||| || ||||||| | ||||||| Sbjct: 1109 acaggttcggcgcacacaggcacacagtaaatcatgaattcacagacccagccagtattt 1050 Query: 71 ttcaaatactcgcttttctgttcggtgtgccgctttcactgggtgcttctttgaac 126 ||| ||||||| |||||||| ||||||||| |||||||||||||||||||||||| Sbjct: 1049 ttcgaatactcagttttctgtccggtgtgccactttcactgggtgcttctttgaac 994
>gb|AY634681.1| Hordeum vulgare ADP-glucose pyrophosphorylase small subunit gene, complete cds, alternatively spliced Length = 9669 Score = 147 bits (74), Expect = 5e-32 Identities = 113/126 (89%) Strand = Plus / Plus Query: 521 gcccataccggttcaacactccccctcaagatcggtggtagatatctatcattcccatct 580 |||||||||||||||||||||||||||||||| ||||||||||||||| |||| | |||| Sbjct: 5371 gcccataccggttcaacactccccctcaagatgggtggtagatatctagcatttcgatct 5430 Query: 581 tgtcacatgccaagttacacttctttgtccccagtccctttatcaaaaaatctgcaaact 640 ||| ||||||||||||||| | |||||| |||||||||||| |||| ||||||| |||| Sbjct: 5431 tgtaacatgccaagttacagtcctttgttcccagtccctttgtcaagcaatctgcgaact 5490 Query: 641 gctgcc 646 | |||| Sbjct: 5491 gttgcc 5496
>gb|BT019029.1| Zea mays clone Contig535.F mRNA sequence Length = 1152 Score = 135 bits (68), Expect = 2e-28 Identities = 126/144 (87%), Gaps = 1/144 (0%) Strand = Plus / Minus Query: 256 ggtattggtacccctaaccctgctgtcaggactttgtatgcgttctggatttgtcttgtg 315 ||||| ||||| ||| |||||||||||||| |||||||| |||||||||||||| ||| Sbjct: 913 ggtatcggtactccttgccctgctgtcaggatcttgtatgccttctggatttgtctagtg 854 Query: 316 actggaccgattttcgcatcaccaatttcacgcccgtcaatcatcacaacccggtgtaat 375 |||||||| |||||| | || || |||||||| || |||||||| |||| |||||||||| Sbjct: 853 actggaccaattttcccgtcgccgatttcacgtccatcaatcattacaa-ccggtgtaat 795 Query: 376 ttcgcccattgttccggttgtcca 399 ||| |||||||||||||||||||| Sbjct: 794 ttcacccattgttccggttgtcca 771
>gb|AY106246.1| Zea mays PCO105094 mRNA sequence Length = 1477 Score = 127 bits (64), Expect = 5e-26 Identities = 125/144 (86%), Gaps = 1/144 (0%) Strand = Plus / Minus Query: 256 ggtattggtacccctaaccctgctgtcaggactttgtatgcgttctggatttgtcttgtg 315 ||||| ||||| ||| |||||||||||||| |||||||| |||||||||||||| ||| Sbjct: 1268 ggtatcggtactccttgccctgctgtcaggatcttgtatgccttctggatttgtctagtg 1209 Query: 316 actggaccgattttcgcatcaccaatttcacgcccgtcaatcatcacaacccggtgtaat 375 |||||||| |||||| | || || |||||||| || |||||||| |||| ||||||| || Sbjct: 1208 actggaccaattttcccgtcgccgatttcacgtccatcaatcattacaa-ccggtgtgat 1150 Query: 376 ttcgcccattgttccggttgtcca 399 ||| |||||||||||||||||||| Sbjct: 1149 ttcacccattgttccggttgtcca 1126
>dbj|AK073091.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033022E01, full insert sequence Length = 2712 Score = 101 bits (51), Expect = 3e-18 Identities = 100/115 (86%), Gaps = 1/115 (0%) Strand = Plus / Minus Query: 285 gactttgtatgcgttctggatttgtcttgtgactggaccgattttcgcatcaccaatttc 344 |||||||||||| |||||||||||||||||||| ||||| |||||| | ||||||||||| Sbjct: 2435 gactttgtatgcattctggatttgtcttgtgaccggacctattttcccgtcaccaatttc 2376 Query: 345 acgcccgtcaatcatcacaacccggtgtaatttcgcccattgttccggttgtcca 399 ||| || |||||||| || | ||||||| ||||| ||||| ||||| || ||||| Sbjct: 2375 acgaccatcaatcattacga-ccggtgtgatttcacccatcgttccagtagtcca 2322
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 93.7 bits (47), Expect = 7e-16 Identities = 68/75 (90%) Strand = Plus / Plus Query: 285 gactttgtatgcgttctggatttgtcttgtgactggaccgattttcgcatcaccaatttc 344 |||||||||||| |||||||||||||||||||| ||||| |||||| | ||||||||||| Sbjct: 13779950 gactttgtatgcattctggatttgtcttgtgaccggacctattttcccgtcaccaatttc 13780009 Query: 345 acgcccgtcaatcat 359 ||| || |||||||| Sbjct: 13780010 acgaccatcaatcat 13780024 Score = 87.7 bits (44), Expect = 4e-14 Identities = 53/56 (94%) Strand = Plus / Plus Query: 534 caacactccccctcaagatcggtggtagatatctatcattcccatcttgtcacatg 589 ||||||||||||||||||| |||| |||||||||||||| |||||||||||||||| Sbjct: 35544223 caacactccccctcaagatgggtgatagatatctatcatacccatcttgtcacatg 35544278 Score = 87.7 bits (44), Expect = 4e-14 Identities = 53/56 (94%) Strand = Plus / Plus Query: 534 caacactccccctcaagatcggtggtagatatctatcattcccatcttgtcacatg 589 ||||||||||||||||||| |||| |||||||||||||| |||||||||||||||| Sbjct: 14568615 caacactccccctcaagatgggtgatagatatctatcatacccatcttgtcacatg 14568670
>gb|AC107619.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0048D11, from chromosome 3, complete sequence Length = 158911 Score = 93.7 bits (47), Expect = 7e-16 Identities = 68/75 (90%) Strand = Plus / Plus Query: 285 gactttgtatgcgttctggatttgtcttgtgactggaccgattttcgcatcaccaatttc 344 |||||||||||| |||||||||||||||||||| ||||| |||||| | ||||||||||| Sbjct: 56478 gactttgtatgcattctggatttgtcttgtgaccggacctattttcccgtcaccaatttc 56537 Query: 345 acgcccgtcaatcat 359 ||| || |||||||| Sbjct: 56538 acgaccatcaatcat 56552
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 93.7 bits (47), Expect = 7e-16 Identities = 68/75 (90%) Strand = Plus / Plus Query: 285 gactttgtatgcgttctggatttgtcttgtgactggaccgattttcgcatcaccaatttc 344 |||||||||||| |||||||||||||||||||| ||||| |||||| | ||||||||||| Sbjct: 13774925 gactttgtatgcattctggatttgtcttgtgaccggacctattttcccgtcaccaatttc 13774984 Query: 345 acgcccgtcaatcat 359 ||| || |||||||| Sbjct: 13774985 acgaccatcaatcat 13774999 Score = 87.7 bits (44), Expect = 4e-14 Identities = 53/56 (94%) Strand = Plus / Plus Query: 534 caacactccccctcaagatcggtggtagatatctatcattcccatcttgtcacatg 589 ||||||||||||||||||| |||| |||||||||||||| |||||||||||||||| Sbjct: 35634295 caacactccccctcaagatgggtgatagatatctatcatacccatcttgtcacatg 35634350 Score = 87.7 bits (44), Expect = 4e-14 Identities = 53/56 (94%) Strand = Plus / Plus Query: 534 caacactccccctcaagatcggtggtagatatctatcattcccatcttgtcacatg 589 ||||||||||||||||||| |||| |||||||||||||| |||||||||||||||| Sbjct: 14563590 caacactccccctcaagatgggtgatagatatctatcatacccatcttgtcacatg 14563645
>gb|AF458765.1| Oryza sativa LTR retrotransposon Osr3-1, complete sequence Length = 5300 Score = 87.7 bits (44), Expect = 4e-14 Identities = 53/56 (94%) Strand = Plus / Minus Query: 534 caacactccccctcaagatcggtggtagatatctatcattcccatcttgtcacatg 589 ||||||||||||||||||| |||| |||||||||||||| |||||||||||||||| Sbjct: 5110 caacactccccctcaagatgggtgatagatatctatcatacccatcttgtcacatg 5055
>gb|AC084765.9| Oryza sativa chromosome 3 BAC OSJNBa0090L05 genomic sequence, complete sequence Length = 147130 Score = 87.7 bits (44), Expect = 4e-14 Identities = 53/56 (94%) Strand = Plus / Minus Query: 534 caacactccccctcaagatcggtggtagatatctatcattcccatcttgtcacatg 589 ||||||||||||||||||| |||| |||||||||||||| |||||||||||||||| Sbjct: 89096 caacactccccctcaagatgggtgatagatatctatcatacccatcttgtcacatg 89041
>emb|AL606614.3|OSJN00047 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0011N17, complete sequence Length = 129498 Score = 87.7 bits (44), Expect = 4e-14 Identities = 53/56 (94%) Strand = Plus / Plus Query: 534 caacactccccctcaagatcggtggtagatatctatcattcccatcttgtcacatg 589 ||||||||||||||||||| |||| |||||||||||||| |||||||||||||||| Sbjct: 8873 caacactccccctcaagatgggtgatagatatctatcatacccatcttgtcacatg 8928
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 87.7 bits (44), Expect = 4e-14 Identities = 53/56 (94%) Strand = Plus / Plus Query: 534 caacactccccctcaagatcggtggtagatatctatcattcccatcttgtcacatg 589 ||||||||||||||||||| |||| |||||||||||||| |||||||||||||||| Sbjct: 24011894 caacactccccctcaagatgggtgatagatatctatcatacccatcttgtcacatg 24011949 Score = 69.9 bits (35), Expect = 1e-08 Identities = 47/51 (92%) Strand = Plus / Minus Query: 533 tcaacactccccctcaagatcggtggtagatatctatcattcccatcttgt 583 |||||||||||||||||||| || | |||||||||||||| |||||||||| Sbjct: 31627297 tcaacactccccctcaagatgggcgatagatatctatcatgcccatcttgt 31627247 Score = 69.9 bits (35), Expect = 1e-08 Identities = 47/51 (92%) Strand = Plus / Minus Query: 533 tcaacactccccctcaagatcggtggtagatatctatcattcccatcttgt 583 |||||||||||||||||||| || | |||||||||||||| |||||||||| Sbjct: 26138250 tcaacactccccctcaagatgggcgatagatatctatcatgcccatcttgt 26138200 Score = 60.0 bits (30), Expect = 1e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 533 tcaacactccccctcaagatcggtggtagatatctatcattcccatcttg 582 |||||||||||||||||||| || | || ||||||||||| ||||||||| Sbjct: 31917300 tcaacactccccctcaagatgggcgataaatatctatcatgcccatcttg 31917349 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 533 tcaacactccccctcaagatcggtggtagatatctatcattcccatcttgtcaca 587 ||||||||||| |||||||| || | || ||||||||||| ||||||||| |||| Sbjct: 28630015 tcaacactccctctcaagatgggcgataaatatctatcatgcccatcttgccaca 28630069
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 87.7 bits (44), Expect = 4e-14 Identities = 53/56 (94%) Strand = Plus / Minus Query: 534 caacactccccctcaagatcggtggtagatatctatcattcccatcttgtcacatg 589 ||||||||||||||||||| |||| |||||||||||||| |||||||||||||||| Sbjct: 6340046 caacactccccctcaagatgggtgatagatatctatcatacccatcttgtcacatg 6339991 Score = 83.8 bits (42), Expect = 7e-13 Identities = 51/54 (94%) Strand = Plus / Minus Query: 534 caacactccccctcaagatcggtggtagatatctatcattcccatcttgtcaca 587 ||||||||||||||||||| |||| |||||||||||||| |||||||||||||| Sbjct: 18120210 caacactccccctcaagatgggtgatagatatctatcatacccatcttgtcaca 18120157 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 534 caacactccccctcaagatcggtggtagatatctatcattcccatcttgtcacat 588 ||||||||||||||||||| ||| ||||||| ||||| |||||||||| |||| Sbjct: 21523925 caacactccccctcaagatgggtaaaagatatcaatcatacccatcttgttacat 21523871
>gb|AC096688.4| Oryza sativa chromosome 3 BAC OSJNBa0015N08 genomic sequence, complete sequence Length = 145290 Score = 87.7 bits (44), Expect = 4e-14 Identities = 53/56 (94%) Strand = Plus / Plus Query: 534 caacactccccctcaagatcggtggtagatatctatcattcccatcttgtcacatg 589 ||||||||||||||||||| |||| |||||||||||||| |||||||||||||||| Sbjct: 77186 caacactccccctcaagatgggtgatagatatctatcatacccatcttgtcacatg 77241
>dbj|AP004649.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1465_C11 Length = 108091 Score = 87.7 bits (44), Expect = 4e-14 Identities = 53/56 (94%) Strand = Plus / Minus Query: 534 caacactccccctcaagatcggtggtagatatctatcattcccatcttgtcacatg 589 ||||||||||||||||||| |||| |||||||||||||| |||||||||||||||| Sbjct: 1943 caacactccccctcaagatgggtgatagatatctatcatacccatcttgtcacatg 1888
>dbj|AP004135.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1132_G05 Length = 87572 Score = 87.7 bits (44), Expect = 4e-14 Identities = 53/56 (94%) Strand = Plus / Minus Query: 534 caacactccccctcaagatcggtggtagatatctatcattcccatcttgtcacatg 589 ||||||||||||||||||| |||| |||||||||||||| |||||||||||||||| Sbjct: 27996 caacactccccctcaagatgggtgatagatatctatcatacccatcttgtcacatg 27941
>gb|AC132492.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0605G01, complete sequence Length = 146303 Score = 83.8 bits (42), Expect = 7e-13 Identities = 51/54 (94%) Strand = Plus / Plus Query: 534 caacactccccctcaagatcggtggtagatatctatcattcccatcttgtcaca 587 ||||||||||||||||||| |||| |||||||||||||| |||||||||||||| Sbjct: 78155 caacactccccctcaagatgggtgatagatatctatcatacccatcttgtcaca 78208
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 83.8 bits (42), Expect = 7e-13 Identities = 51/54 (94%) Strand = Plus / Plus Query: 534 caacactccccctcaagatcggtggtagatatctatcattcccatcttgtcaca 587 ||||||||||||||||||| |||| |||||||||||||| |||||||||||||| Sbjct: 2369337 caacactccccctcaagatgggtgatagatatctatcatacccatcttgtcaca 2369390 Score = 46.1 bits (23), Expect = 0.14 Identities = 44/51 (86%) Strand = Plus / Plus Query: 533 tcaacactccccctcaagatcggtggtagatatctatcattcccatcttgt 583 |||||||||||||||||||| || ||||||| ||||| |||||||||| Sbjct: 2353265 tcaacactccccctcaagatgggcaaaagatatcaatcatgcccatcttgt 2353315
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 83.8 bits (42), Expect = 7e-13 Identities = 51/54 (94%) Strand = Plus / Plus Query: 534 caacactccccctcaagatcggtggtagatatctatcattcccatcttgtcaca 587 ||||||||||||||||||| |||| |||||||||||||| |||||||||||||| Sbjct: 19274080 caacactccccctcaagatgggtgatagatatctatcatacccatcttgtcaca 19274133
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 83.8 bits (42), Expect = 7e-13 Identities = 51/54 (94%) Strand = Plus / Plus Query: 534 caacactccccctcaagatcggtggtagatatctatcattcccatcttgtcaca 587 ||||||||||||||||||| |||| |||||||||||||| |||||||||||||| Sbjct: 3114364 caacactccccctcaagatgggtgatagatatctatcatacccatcttgtcaca 3114417 Score = 79.8 bits (40), Expect = 1e-11 Identities = 52/56 (92%) Strand = Plus / Minus Query: 534 caacactccccctcaagatcggtggtagatatctatcattcccatcttgtcacatg 589 |||||||||| |||||||| |||| |||||||||||||| |||||||||||||||| Sbjct: 33970469 caacactccctctcaagatgggtgatagatatctatcatacccatcttgtcacatg 33970414
>dbj|AP004871.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0419H03 Length = 129020 Score = 83.8 bits (42), Expect = 7e-13 Identities = 51/54 (94%) Strand = Plus / Plus Query: 534 caacactccccctcaagatcggtggtagatatctatcattcccatcttgtcaca 587 ||||||||||||||||||| |||| |||||||||||||| |||||||||||||| Sbjct: 42518 caacactccccctcaagatgggtgatagatatctatcatacccatcttgtcaca 42571
>dbj|AK063437.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-115-E07, full insert sequence Length = 2663 Score = 83.8 bits (42), Expect = 7e-13 Identities = 51/54 (94%) Strand = Plus / Minus Query: 534 caacactccccctcaagatcggtggtagatatctatcattcccatcttgtcaca 587 ||||||||||||||||||| |||| |||||||||||||| |||||||||||||| Sbjct: 2531 caacactccccctcaagatgggtgatagatatctatcatacccatcttgtcaca 2478
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 83.8 bits (42), Expect = 7e-13 Identities = 51/54 (94%) Strand = Plus / Plus Query: 534 caacactccccctcaagatcggtggtagatatctatcattcccatcttgtcaca 587 ||||||||||||||||||| |||| |||||||||||||| |||||||||||||| Sbjct: 2369281 caacactccccctcaagatgggtgatagatatctatcatacccatcttgtcaca 2369334 Score = 46.1 bits (23), Expect = 0.14 Identities = 44/51 (86%) Strand = Plus / Plus Query: 533 tcaacactccccctcaagatcggtggtagatatctatcattcccatcttgt 583 |||||||||||||||||||| || ||||||| ||||| |||||||||| Sbjct: 2353209 tcaacactccccctcaagatgggcaaaagatatcaatcatgcccatcttgt 2353259
>emb|AL954364.5|CNS08CCZ Oryza sativa chromosome 12, . BAC OSJNBa0023M16 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 156258 Score = 83.8 bits (42), Expect = 7e-13 Identities = 51/54 (94%) Strand = Plus / Plus Query: 534 caacactccccctcaagatcggtggtagatatctatcattcccatcttgtcaca 587 ||||||||||||||||||| |||| |||||||||||||| |||||||||||||| Sbjct: 94528 caacactccccctcaagatgggtgatagatatctatcatacccatcttgtcaca 94581 Score = 46.1 bits (23), Expect = 0.14 Identities = 44/51 (86%) Strand = Plus / Plus Query: 533 tcaacactccccctcaagatcggtggtagatatctatcattcccatcttgt 583 |||||||||||||||||||| || ||||||| ||||| |||||||||| Sbjct: 78456 tcaacactccccctcaagatgggcaaaagatatcaatcatgcccatcttgt 78506
>dbj|AP005795.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1090H08 Length = 200720 Score = 83.8 bits (42), Expect = 7e-13 Identities = 51/54 (94%) Strand = Plus / Minus Query: 534 caacactccccctcaagatcggtggtagatatctatcattcccatcttgtcaca 587 ||||||||||||||||||| |||| |||||||||||||| |||||||||||||| Sbjct: 124006 caacactccccctcaagatgggtgatagatatctatcatacccatcttgtcaca 123953
>dbj|AP003975.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1004_E04 Length = 133621 Score = 79.8 bits (40), Expect = 1e-11 Identities = 52/56 (92%) Strand = Plus / Minus Query: 534 caacactccccctcaagatcggtggtagatatctatcattcccatcttgtcacatg 589 |||||||||| |||||||| |||| |||||||||||||| |||||||||||||||| Sbjct: 129432 caacactccctctcaagatgggtgatagatatctatcatacccatcttgtcacatg 129377
>gb|AC146937.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0004O15 map near R3342S, complete sequence Length = 140142 Score = 73.8 bits (37), Expect = 6e-10 Identities = 52/57 (91%) Strand = Plus / Plus Query: 533 tcaacactccccctcaagatcggtggtagatatctatcattcccatcttgtcacatg 589 |||||||||||||||||||| || | |||||||||||||| |||||||||| ||||| Sbjct: 93606 tcaacactccccctcaagatgggcgatagatatctatcatgcccatcttgttacatg 93662
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 73.8 bits (37), Expect = 6e-10 Identities = 52/57 (91%) Strand = Plus / Minus Query: 533 tcaacactccccctcaagatcggtggtagatatctatcattcccatcttgtcacatg 589 |||||||||||||||||||| || | |||||||||||||| |||||||||| ||||| Sbjct: 27628367 tcaacactccccctcaagatgggcgatagatatctatcatgcccatcttgttacatg 27628311 Score = 60.0 bits (30), Expect = 1e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 533 tcaacactccccctcaagatcggtggtagatatctatcattcccatcttg 582 |||||||||||||||||||| || | || ||||||||||| ||||||||| Sbjct: 26237550 tcaacactccccctcaagatgggcgataaatatctatcatgcccatcttg 26237599 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 534 caacactccccctcaagatcggtggtagatatctat 569 ||||||||||||||||||| |||| ||||||||||| Sbjct: 20056596 caacactccccctcaagatgggtgatagatatctat 20056631
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 73.8 bits (37), Expect = 6e-10 Identities = 52/57 (91%) Strand = Plus / Minus Query: 533 tcaacactccccctcaagatcggtggtagatatctatcattcccatcttgtcacatg 589 |||||||||||||||||||| || | |||||||||||||| |||||||||| ||||| Sbjct: 27652355 tcaacactccccctcaagatgggcgatagatatctatcatgcccatcttgttacatg 27652299 Score = 60.0 bits (30), Expect = 1e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 533 tcaacactccccctcaagatcggtggtagatatctatcattcccatcttg 582 |||||||||||||||||||| || | || ||||||||||| ||||||||| Sbjct: 26551768 tcaacactccccctcaagatgggcgataaatatctatcatgcccatcttg 26551817 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 534 caacactccccctcaagatcggtggtagatatctat 569 ||||||||||||||||||| |||| ||||||||||| Sbjct: 20343472 caacactccccctcaagatgggtgatagatatctat 20343507
>emb|AL663010.4|OSJN00211 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0065J09, complete sequence Length = 117443 Score = 69.9 bits (35), Expect = 1e-08 Identities = 47/51 (92%) Strand = Plus / Minus Query: 533 tcaacactccccctcaagatcggtggtagatatctatcattcccatcttgt 583 |||||||||||||||||||| || | |||||||||||||| |||||||||| Sbjct: 25435 tcaacactccccctcaagatgggcgatagatatctatcatgcccatcttgt 25385
>emb|AL606660.3|OSJN00111 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0085C12, complete sequence Length = 122721 Score = 69.9 bits (35), Expect = 1e-08 Identities = 47/51 (92%) Strand = Plus / Minus Query: 533 tcaacactccccctcaagatcggtggtagatatctatcattcccatcttgt 583 |||||||||||||||||||| || | |||||||||||||| |||||||||| Sbjct: 42114 tcaacactccccctcaagatgggcgatagatatctatcatgcccatcttgt 42064
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 69.9 bits (35), Expect = 1e-08 Identities = 47/51 (92%) Strand = Plus / Plus Query: 533 tcaacactccccctcaagatcggtggtagatatctatcattcccatcttgt 583 |||||||||||||||||||| || | |||||||||||||| |||||||||| Sbjct: 11804507 tcaacactccccctcaagatgggcgatagatatctatcatgcccatcttgt 11804557
>dbj|AP005572.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1506_A04 Length = 114998 Score = 69.9 bits (35), Expect = 1e-08 Identities = 47/51 (92%) Strand = Plus / Plus Query: 533 tcaacactccccctcaagatcggtggtagatatctatcattcccatcttgt 583 |||||||||||||||||||| || | |||||||||||||| |||||||||| Sbjct: 47325 tcaacactccccctcaagatgggcgatagatatctatcatgcccatcttgt 47375
>dbj|AK100229.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023048L06, full insert sequence Length = 898 Score = 69.9 bits (35), Expect = 1e-08 Identities = 47/51 (92%) Strand = Plus / Minus Query: 533 tcaacactccccctcaagatcggtggtagatatctatcattcccatcttgt 583 |||||||||||||||||||| || | |||||||||||||| |||||||||| Sbjct: 803 tcaacactccccctcaagatgggcgatagatatctatcatgcccatcttgt 753
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 67.9 bits (34), Expect = 4e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 534 caacactccccctcaagatcggtggtagatatctatcattcccatcttgt 583 ||||||||||||||||||| || | |||||||||||||| |||||||||| Sbjct: 24741545 caacactccccctcaagatgggcgatagatatctatcatgcccatcttgt 24741594 Score = 60.0 bits (30), Expect = 1e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 533 tcaacactccccctcaagatcggtggtagatatctatcattcccatcttg 582 |||||||||||||||||||| || | || ||||||||||| ||||||||| Sbjct: 21939819 tcaacactccccctcaagatgggcgataaatatctatcatgcccatcttg 21939868 Score = 60.0 bits (30), Expect = 1e-05 Identities = 45/50 (90%) Strand = Plus / Minus Query: 533 tcaacactccccctcaagatcggtggtagatatctatcattcccatcttg 582 |||||||||||||||||||| || | || ||||||||||| ||||||||| Sbjct: 5651005 tcaacactccccctcaagatgggcgataaatatctatcatgcccatcttg 5650956 Score = 46.1 bits (23), Expect = 0.14 Identities = 44/51 (86%) Strand = Plus / Plus Query: 533 tcaacactccccctcaagatcggtggtagatatctatcattcccatcttgt 583 |||||||||||||||||||| || ||||||| ||||| |||||||||| Sbjct: 5947618 tcaacactccccctcaagatgggcaaaagatatcaatcatgcccatcttgt 5947668 Score = 46.1 bits (23), Expect = 0.14 Identities = 47/55 (85%) Strand = Plus / Minus Query: 534 caacactccccctcaagatcggtggtagatatctatcattcccatcttgtcacat 588 ||||||||||||||||||| || ||||||| ||||| |||||||||| |||| Sbjct: 5232521 caacactccccctcaagatgggcaaaagatatcaatcatacccatcttgttacat 5232467
>dbj|AP005175.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0040H10 Length = 132919 Score = 67.9 bits (34), Expect = 4e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 534 caacactccccctcaagatcggtggtagatatctatcattcccatcttgt 583 ||||||||||||||||||| || | |||||||||||||| |||||||||| Sbjct: 97482 caacactccccctcaagatgggcgatagatatctatcatgcccatcttgt 97531
>ref|XM_470422.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3900 Score = 63.9 bits (32), Expect = 6e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 546 tcaagatcggtggtagatatctatcattcccatcttgtcacatg 589 ||||||| |||| |||||||||||||| |||||||||||||||| Sbjct: 3900 tcaagatgggtgatagatatctatcatacccatcttgtcacatg 3857
>ref|XM_472906.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3789 Score = 63.9 bits (32), Expect = 6e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 546 tcaagatcggtggtagatatctatcattcccatcttgtcacatg 589 ||||||| |||| |||||||||||||| |||||||||||||||| Sbjct: 3789 tcaagatgggtgatagatatctatcatacccatcttgtcacatg 3746
>ref|XM_470692.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3531 Score = 63.9 bits (32), Expect = 6e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 546 tcaagatcggtggtagatatctatcattcccatcttgtcacatg 589 ||||||| |||| |||||||||||||| |||||||||||||||| Sbjct: 3531 tcaagatgggtgatagatatctatcatacccatcttgtcacatg 3488
>gb|AC133609.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0002C14, complete sequence Length = 154029 Score = 60.0 bits (30), Expect = 1e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 533 tcaacactccccctcaagatcggtggtagatatctatcattcccatcttg 582 |||||||||||||||||||| || | || ||||||||||| ||||||||| Sbjct: 141399 tcaacactccccctcaagatgggcgataaatatctatcatgcccatcttg 141448
>gb|AC134924.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBb0076M06, complete sequence Length = 133581 Score = 60.0 bits (30), Expect = 1e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 533 tcaacactccccctcaagatcggtggtagatatctatcattcccatcttg 582 |||||||||||||||||||| || | || ||||||||||| ||||||||| Sbjct: 39159 tcaacactccccctcaagatgggcgataaatatctatcatgcccatcttg 39208
>emb|AL606669.4|OSJN00106 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0060E08, complete sequence Length = 166951 Score = 60.0 bits (30), Expect = 1e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 533 tcaacactccccctcaagatcggtggtagatatctatcattcccatcttg 582 |||||||||||||||||||| || | || ||||||||||| ||||||||| Sbjct: 90166 tcaacactccccctcaagatgggcgataaatatctatcatgcccatcttg 90215
>dbj|AP004261.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0013G11 Length = 151405 Score = 60.0 bits (30), Expect = 1e-05 Identities = 45/50 (90%) Strand = Plus / Plus Query: 533 tcaacactccccctcaagatcggtggtagatatctatcattcccatcttg 582 |||||||||||||||||||| || | || ||||||||||| ||||||||| Sbjct: 31863 tcaacactccccctcaagatgggcgataaatatctatcatgcccatcttg 31912
>dbj|AP004273.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0431A02 Length = 165038 Score = 60.0 bits (30), Expect = 1e-05 Identities = 45/50 (90%) Strand = Plus / Minus Query: 533 tcaacactccccctcaagatcggtggtagatatctatcattcccatcttg 582 |||||||||||||||||||| || | || ||||||||||| ||||||||| Sbjct: 112697 tcaacactccccctcaagatgggcgataaatatctatcatgcccatcttg 112648
>gb|AC136905.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0064E13, complete sequence Length = 150158 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 534 caacactccccctcaagatcggtggtagatatctat 569 ||||||||||||||||||| |||| ||||||||||| Sbjct: 67731 caacactccccctcaagatgggtgatagatatctat 67766
>ref|XM_507246.1| PREDICTED Oryza sativa (japonica cultivar-group), P0528B09.40 patrial mRNA Length = 766 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 534 caacactccccctcaagatcggtggtagatatctatcattcccatcttgtcacat 588 ||||||||||||||||||| ||| ||||||| ||||| |||||||||| |||| Sbjct: 659 caacactccccctcaagatgggtaaaagatatcaatcatacccatcttgttacat 605
>emb|AL663003.2|OSJN00203 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0032E06, complete sequence Length = 125196 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 533 tcaacactccccctcaagatcggtggtagatatctatcattcccatcttgtcaca 587 ||||||||||| |||||||| || | || ||||||||||| ||||||||| |||| Sbjct: 120805 tcaacactccctctcaagatgggcgataaatatctatcatgcccatcttgccaca 120859
>emb|AL607001.4|OSJN00128 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0088I22, complete sequence Length = 164572 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 533 tcaacactccccctcaagatcggtggtagatatctatcattcccatcttgtcaca 587 ||||||||||| |||||||| || | || ||||||||||| ||||||||| |||| Sbjct: 160943 tcaacactccctctcaagatgggcgataaatatctatcatgcccatcttgccaca 160889
>dbj|AP004703.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0528B09 Length = 156897 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 534 caacactccccctcaagatcggtggtagatatctatcattcccatcttgtcacat 588 ||||||||||||||||||| ||| ||||||| ||||| |||||||||| |||| Sbjct: 127920 caacactccccctcaagatgggtaaaagatatcaatcatacccatcttgttacat 127866
>dbj|AK105223.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-110-E11, full insert sequence Length = 766 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 534 caacactccccctcaagatcggtggtagatatctatcattcccatcttgtcacat 588 ||||||||||||||||||| ||| ||||||| ||||| |||||||||| |||| Sbjct: 659 caacactccccctcaagatgggtaaaagatatcaatcatacccatcttgttacat 605
>dbj|AP004545.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT26E16, TM0103, complete sequence Length = 100595 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Minus Query: 532 ttcaacactccccctcaagatcggtggtagatatctatcattccca 577 |||||||||||||||||| | ||||| ||||||||||||| |||| Sbjct: 88726 ttcaacactccccctcaatctgggtggaagatatctatcataccca 88681
>gb|AC051632.18| Oryza sativa chromosome 10 BAC OSJNBa0012L23 genomic sequence, complete sequence Length = 153182 Score = 46.1 bits (23), Expect = 0.14 Identities = 45/51 (88%), Gaps = 1/51 (1%) Strand = Plus / Minus Query: 533 tcaacactccccc-tcaagatcggtggtagatatctatcattcccatcttg 582 ||||||||||||| ||||||| || | || ||||||||||| ||||||||| Sbjct: 134129 tcaacactcccccctcaagatgggcgataaatatctatcatgcccatcttg 134079
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 46.1 bits (23), Expect = 0.14 Identities = 45/51 (88%), Gaps = 1/51 (1%) Strand = Plus / Minus Query: 533 tcaacactccccc-tcaagatcggtggtagatatctatcattcccatcttg 582 ||||||||||||| ||||||| || | || ||||||||||| ||||||||| Sbjct: 17779009 tcaacactcccccctcaagatgggcgataaatatctatcatgcccatcttg 17778959
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 46.1 bits (23), Expect = 0.14 Identities = 44/51 (86%) Strand = Plus / Minus Query: 533 tcaacactccccctcaagatcggtggtagatatctatcattcccatcttgt 583 |||||||||||||||||||| || ||||||| ||||| |||||||||| Sbjct: 41602830 tcaacactccccctcaagatgggcaaaagatatcaatcatgcccatcttgt 41602780 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Plus Query: 534 caacactccccctcaagatcggtggtagatatctatcattcccatct 580 ||||| ||||||||||||| || | || ||||||||||| ||||||| Sbjct: 12882051 caacagtccccctcaagatgggcgataaatatctatcatgcccatct 12882097 Score = 44.1 bits (22), Expect = 0.56 Identities = 43/50 (86%) Strand = Plus / Minus Query: 534 caacactccccctcaagatcggtggtagatatctatcattcccatcttgt 583 ||||||||||||||||||| || ||||||| ||||| |||||||||| Sbjct: 39613731 caacactccccctcaagatgggcaaaagatatcgatcatgcccatcttgt 39613682
>dbj|AP003259.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0466H10 Length = 176530 Score = 46.1 bits (23), Expect = 0.14 Identities = 44/51 (86%) Strand = Plus / Minus Query: 533 tcaacactccccctcaagatcggtggtagatatctatcattcccatcttgt 583 |||||||||||||||||||| || ||||||| ||||| |||||||||| Sbjct: 18432 tcaacactccccctcaagatgggcaaaagatatcaatcatgcccatcttgt 18382
>dbj|AP003848.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1715_A07 Length = 130907 Score = 46.1 bits (23), Expect = 0.14 Identities = 47/55 (85%) Strand = Plus / Minus Query: 534 caacactccccctcaagatcggtggtagatatctatcattcccatcttgtcacat 588 ||||||||||||||||||| || ||||||| ||||| |||||||||| |||| Sbjct: 99235 caacactccccctcaagatgggcaaaagatatcaatcatacccatcttgttacat 99181
>dbj|AP003537.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1140D12 Length = 139301 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Plus Query: 534 caacactccccctcaagatcggtggtagatatctatcattcccatct 580 ||||| ||||||||||||| || | || ||||||||||| ||||||| Sbjct: 33492 caacagtccccctcaagatgggcgataaatatctatcatgcccatct 33538
>dbj|AP005098.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0008C11 Length = 157205 Score = 46.1 bits (23), Expect = 0.14 Identities = 44/51 (86%) Strand = Plus / Plus Query: 533 tcaacactccccctcaagatcggtggtagatatctatcattcccatcttgt 583 |||||||||||||||||||| || ||||||| ||||| |||||||||| Sbjct: 2788 tcaacactccccctcaagatgggcaaaagatatcaatcatgcccatcttgt 2838
>dbj|AP003748.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1136_A05 Length = 120823 Score = 46.1 bits (23), Expect = 0.14 Identities = 44/51 (86%) Strand = Plus / Plus Query: 533 tcaacactccccctcaagatcggtggtagatatctatcattcccatcttgt 583 |||||||||||||||||||| || ||||||| ||||| |||||||||| Sbjct: 90066 tcaacactccccctcaagatgggcaaaagatatcaatcatgcccatcttgt 90116
>dbj|AP004379.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0589E08 Length = 138416 Score = 46.1 bits (23), Expect = 0.14 Identities = 47/55 (85%) Strand = Plus / Minus Query: 534 caacactccccctcaagatcggtggtagatatctatcattcccatcttgtcacat 588 ||||||||||||||||||| || ||||||| ||||| |||||||||| |||| Sbjct: 31284 caacactccccctcaagatgggcaaaagatatcaatcatacccatcttgttacat 31230
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 46.1 bits (23), Expect = 0.14 Identities = 45/51 (88%), Gaps = 1/51 (1%) Strand = Plus / Minus Query: 533 tcaacactccccc-tcaagatcggtggtagatatctatcattcccatcttg 582 ||||||||||||| ||||||| || | || ||||||||||| ||||||||| Sbjct: 17788262 tcaacactcccccctcaagatgggcgataaatatctatcatgcccatcttg 17788212
>dbj|AP003416.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0456E05 Length = 173699 Score = 44.1 bits (22), Expect = 0.56 Identities = 43/50 (86%) Strand = Plus / Minus Query: 534 caacactccccctcaagatcggtggtagatatctatcattcccatcttgt 583 ||||||||||||||||||| || ||||||| ||||| |||||||||| Sbjct: 94687 caacactccccctcaagatgggcaaaagatatcgatcatgcccatcttgt 94638
>dbj|AK119276.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-130-B08, full insert sequence Length = 2836 Score = 44.1 bits (22), Expect = 0.56 Identities = 43/50 (86%) Strand = Plus / Plus Query: 534 caacactccccctcaagatcggtggtagatatctatcattcccatcttgt 583 ||||||||||||||||||| || ||||||| ||||| |||||||||| Sbjct: 961 caacactccccctcaagatgggcaaaagatatcgatcatgcccatcttgt 1010
>dbj|AK099909.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116D08, full insert sequence Length = 5040 Score = 44.1 bits (22), Expect = 0.56 Identities = 43/50 (86%) Strand = Plus / Plus Query: 534 caacactccccctcaagatcggtggtagatatctatcattcccatcttgt 583 ||||||||||||||||||| || ||||||| ||||| |||||||||| Sbjct: 989 caacactccccctcaagatgggcaaaagatatcgatcatgcccatcttgt 1038
>dbj|AK072072.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013111N21, full insert sequence Length = 3357 Score = 44.1 bits (22), Expect = 0.56 Identities = 43/50 (86%) Strand = Plus / Minus Query: 534 caacactccccctcaagatcggtggtagatatctatcattcccatcttgt 583 ||||||||||||||||||| || ||||||| ||||| |||||||||| Sbjct: 3246 caacactccccctcaagatgggcaaaagatatcgatcatgcccatcttgt 3197
>ref|XM_511431.1| PREDICTED: Pan troglodytes transcriptional adaptor 2-like (LOC454605), mRNA Length = 1746 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 555 gtggtagatatctatcattcc 575 ||||||||||||||||||||| Sbjct: 1033 gtggtagatatctatcattcc 1053
>gb|AY661659.1| Sorghum bicolor clone BAC 75D9, complete sequence Length = 204120 Score = 42.1 bits (21), Expect = 2.2 Identities = 42/49 (85%) Strand = Plus / Plus Query: 534 caacactccccctcaagatcggtggtagatatctatcattcccatcttg 582 ||||||||||||||||||| || ||||||||| ||| ||||||||| Sbjct: 137064 caacactccccctcaagatgggctaaagatatctaacatgcccatcttg 137112
>gb|BC001172.1| Homo sapiens transcriptional adaptor 2 (ADA2 homolog, yeast)-like, transcript variant 2, mRNA (cDNA clone MGC:1984 IMAGE:3355742), complete cds Length = 1066 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 555 gtggtagatatctatcattcc 575 ||||||||||||||||||||| Sbjct: 727 gtggtagatatctatcattcc 747
>gb|AC145807.2| Xenopus tropicalis clone CH216-9P15, complete sequence Length = 225808 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 498 taagggagaggaggctgggctgggc 522 ||||||||||| ||||||||||||| Sbjct: 95278 taagggagaggtggctgggctgggc 95254
>gb|AE016795.2| Vibrio vulnificus CMCP6 chromosome I complete sequence Length = 3281944 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 115 gcttctttgaacaatagcgac 135 ||||||||||||||||||||| Sbjct: 2467704 gcttctttgaacaatagcgac 2467724
>emb|CR378670.1| Photobacterium profundum SS9; segment 8/12 Length = 348672 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 66 tatttttcaaatactcgcttttctg 90 ||||||||||||||| ||||||||| Sbjct: 12760 tatttttcaaatactggcttttctg 12736
>emb|CR615572.1| full-length cDNA clone CS0DL010YF06 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 1306 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 555 gtggtagatatctatcattcc 575 ||||||||||||||||||||| Sbjct: 339 gtggtagatatctatcattcc 359
>dbj|AK096371.1| Homo sapiens cDNA FLJ39052 fis, clone NT2RP7011721, highly similar to HADA2=transcriptional adaptor Length = 2199 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 555 gtggtagatatctatcattcc 575 ||||||||||||||||||||| Sbjct: 767 gtggtagatatctatcattcc 787
>dbj|AK022767.1| Homo sapiens cDNA FLJ12705 fis, clone NT2RP1000860, highly similar to Homo sapiens KL04P mRNA Length = 1829 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 555 gtggtagatatctatcattcc 575 ||||||||||||||||||||| Sbjct: 991 gtggtagatatctatcattcc 1011
>ref|NM_001488.3| Homo sapiens transcriptional adaptor 2 (ADA2 homolog, yeast)-like (TADA2L), transcript variant 1, mRNA Length = 1886 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 555 gtggtagatatctatcattcc 575 ||||||||||||||||||||| Sbjct: 988 gtggtagatatctatcattcc 1008
>ref|NM_133439.2| Homo sapiens transcriptional adaptor 2 (ADA2 homolog, yeast)-like (TADA2L), transcript variant 2, mRNA Length = 1327 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 555 gtggtagatatctatcattcc 575 ||||||||||||||||||||| Sbjct: 988 gtggtagatatctatcattcc 1008
>gb|AC004099.1|AC004099 Homo sapiens chromosome 17, clone HCIT421K24, complete sequence Length = 136222 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 555 gtggtagatatctatcattcc 575 ||||||||||||||||||||| Sbjct: 37685 gtggtagatatctatcattcc 37705
>gb|BC011753.2| Homo sapiens transcriptional adaptor 2 (ADA2 homolog, yeast)-like, transcript variant 1, mRNA (cDNA clone MGC:19708 IMAGE:3533186), complete cds Length = 1625 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 555 gtggtagatatctatcattcc 575 ||||||||||||||||||||| Sbjct: 727 gtggtagatatctatcattcc 747
>gb|AF069732.1|AF069732 Homo sapiens ADA2-like protein mRNA, complete cds Length = 1092 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 555 gtggtagatatctatcattcc 575 ||||||||||||||||||||| Sbjct: 379 gtggtagatatctatcattcc 399
>gb|AF064094.1|AF064094 Homo sapiens KL04P mRNA, complete cds Length = 1691 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 555 gtggtagatatctatcattcc 575 ||||||||||||||||||||| Sbjct: 727 gtggtagatatctatcattcc 747
>dbj|AP004511.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT17H19, TM0041, complete sequence Length = 108987 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 617 cctttatcaaaaaatctgcaaactg 641 |||||||||||| |||||||||||| Sbjct: 50313 cctttatcaaaacatctgcaaactg 50289
>gb|AC159008.2| Mus musculus BAC clone RP23-14E14 from chromosome 7, complete sequence Length = 239149 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 205 caaaaggaaaagaagaatgt 224 |||||||||||||||||||| Sbjct: 171150 caaaaggaaaagaagaatgt 171169
>gb|AC165958.2| Mus musculus BAC clone RP23-417I20 from chromosome 16, complete sequence Length = 186202 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 205 caaaaggaaaagaagaatgt 224 |||||||||||||||||||| Sbjct: 182109 caaaaggaaaagaagaatgt 182128
>gb|AC169508.1| Mus musculus BAC clone RP23-167I21 from chromosome 16, complete sequence Length = 211870 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 205 caaaaggaaaagaagaatgt 224 |||||||||||||||||||| Sbjct: 134631 caaaaggaaaagaagaatgt 134650
>gb|AC129332.6| Mus musculus BAC clone RP23-91I19 from chromosome 9, complete sequence Length = 219117 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 268 cctaaccctgctgtcaggac 287 |||||||||||||||||||| Sbjct: 72307 cctaaccctgctgtcaggac 72326
>gb|AC127578.4| Mus musculus BAC clone RP23-428L14 from chromosome 15, complete sequence Length = 206410 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 aaaaggaaaagaagaatgtc 225 |||||||||||||||||||| Sbjct: 172503 aaaaggaaaagaagaatgtc 172484
>gb|AC125016.20| Mus musculus chromosome 7, clone RP24-157A17, complete sequence Length = 176607 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 205 caaaaggaaaagaagaatgt 224 |||||||||||||||||||| Sbjct: 53776 caaaaggaaaagaagaatgt 53795
>gb|AC100208.16| Mus musculus chromosome 7, clone RP23-59J14, complete sequence Length = 280763 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 205 caaaaggaaaagaagaatgt 224 |||||||||||||||||||| Sbjct: 41668 caaaaggaaaagaagaatgt 41649
>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence Length = 6365727 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 600 cttctttgtccccagtccct 619 |||||||||||||||||||| Sbjct: 3279312 cttctttgtccccagtccct 3279331
>gb|AC107733.14| Mus musculus chromosome 5, clone RP23-410E2, complete sequence Length = 200403 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 205 caaaaggaaaagaagaatgt 224 |||||||||||||||||||| Sbjct: 158491 caaaaggaaaagaagaatgt 158510
>gb|AC006465.2| Homo sapiens BAC clone RP11-438H20 from 7, complete sequence Length = 101768 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 gtgcttctttgaacaatagc 132 |||||||||||||||||||| Sbjct: 29305 gtgcttctttgaacaatagc 29286
>gb|AC125057.5| Mus musculus BAC clone RP23-399K1 from chromosome 12, complete sequence Length = 182276 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 135 ctatttattgttattactct 154 |||||||||||||||||||| Sbjct: 131974 ctatttattgttattactct 131993
>ref|XM_810844.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053509791.70) partial mRNA Length = 1134 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 gcacacacgcacacaataaa 41 |||||||||||||||||||| Sbjct: 127 gcacacacgcacacaataaa 108
>gb|AC129300.3| Mus musculus BAC clone RP24-427A8 from chromosome 7, complete sequence Length = 155123 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 205 caaaaggaaaagaagaatgt 224 |||||||||||||||||||| Sbjct: 40195 caaaaggaaaagaagaatgt 40214
>gb|AC124197.4| Mus musculus BAC clone RP23-298C4 from 15, complete sequence Length = 184090 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 206 aaaaggaaaagaagaatgtc 225 |||||||||||||||||||| Sbjct: 176141 aaaaggaaaagaagaatgtc 176160
>gb|AC115797.16| Mus musculus chromosome 17, clone RP23-405J10, complete sequence Length = 193909 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 205 caaaaggaaaagaagaatgt 224 |||||||||||||||||||| Sbjct: 37715 caaaaggaaaagaagaatgt 37696
>emb|BX276121.14| Mouse DNA sequence from clone RP23-211L15 on chromosome X, complete sequence Length = 9074 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 205 caaaaggaaaagaagaatgt 224 |||||||||||||||||||| Sbjct: 4879 caaaaggaaaagaagaatgt 4860
>gb|AC121955.2| Mus musculus BAC clone RP24-223N5 from 5, complete sequence Length = 153819 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 205 caaaaggaaaagaagaatgt 224 |||||||||||||||||||| Sbjct: 15068 caaaaggaaaagaagaatgt 15087
>gb|AC055772.16| Mus musculus chromosome 12, clone RP23-291K4, complete sequence Length = 168350 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 gcgcacacacgcacacaata 39 |||||||||||||||||||| Sbjct: 22556 gcgcacacacgcacacaata 22575
>emb|AL109845.8|HSJ658I14 Human DNA sequence from clone RP4-658I14 on chromosome 1p33-34.3 Contains the 3' end of the MPRP-1 gene for metalloprotease related protein 1, complete sequence Length = 125419 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 cacacacgcacacaataaat 42 |||||||||||||||||||| Sbjct: 63332 cacacacgcacacaataaat 63313
>gb|AC103688.4| Homo sapiens chromosome 8, clone CTD-3046C4, complete sequence Length = 211222 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 203 ttcaaaaggaaaagaagaat 222 |||||||||||||||||||| Sbjct: 197943 ttcaaaaggaaaagaagaat 197962
>emb|BX248578.6| Mouse DNA sequence from clone RP23-227K23 on chromosome 11 Contains a pseudogene similar to part of eukaryotic translation initiation factor 3, subunit 5 (epsilon) Eif3s5, complete sequence Length = 160629 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 205 caaaaggaaaagaagaatgt 224 |||||||||||||||||||| Sbjct: 146715 caaaaggaaaagaagaatgt 146734
>emb|AL512585.12| Mouse DNA sequence from clone RP23-236A12 on chromosome 4, complete sequence Length = 217400 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 205 caaaaggaaaagaagaatgt 224 |||||||||||||||||||| Sbjct: 147613 caaaaggaaaagaagaatgt 147632
>emb|CR846096.4| Zebrafish DNA sequence from clone DKEYP-8C10 in linkage group 14, complete sequence Length = 91350 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 cgcacacacgcacacaataa 40 |||||||||||||||||||| Sbjct: 58073 cgcacacacgcacacaataa 58092
>gb|AC011978.6| Homo sapiens chromosome 8, clone RP11-16E18, complete sequence Length = 159715 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 203 ttcaaaaggaaaagaagaat 222 |||||||||||||||||||| Sbjct: 55813 ttcaaaaggaaaagaagaat 55832
>gb|AC025895.9| Homo sapiens, clone RP11-610C20, complete sequence Length = 179113 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 448 tggctgggtgcctcctttct 467 |||||||||||||||||||| Sbjct: 160244 tggctgggtgcctcctttct 160225
>dbj|AP008236.2| Homo sapiens genomic DNA, 8p21.2, PCR product: KPchr8gap3, complete sequence Length = 6695 Score = 40.1 bits (20), Expect = 8.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 444 tggatggctgggtgcctcctttct 467 |||||||||||| ||||||||||| Sbjct: 1283 tggatggctgggggcctcctttct 1306
>gb|AC106777.2| Homo sapiens chromosome 5 clone RP11-326M11, complete sequence Length = 161720 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 199 ccttttcaaaaggaaaagaa 218 |||||||||||||||||||| Sbjct: 73653 ccttttcaaaaggaaaagaa 73672
>gb|AC022858.8| Homo sapiens chromosome 8, clone RP11-326E22, complete sequence Length = 187340 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 461 cctttctaggtcagtccctc 480 |||||||||||||||||||| Sbjct: 16877 cctttctaggtcagtccctc 16896
>gb|AC154268.2| Mus musculus BAC clone RP24-235B13 from chromosome 13, complete sequence Length = 157088 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 205 caaaaggaaaagaagaatgt 224 |||||||||||||||||||| Sbjct: 108099 caaaaggaaaagaagaatgt 108080
>gb|AC160960.5| Mus musculus BAC clone RP24-230O19 from chromosome 13, complete sequence Length = 152915 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 gctggatggctgggtgcctc 461 |||||||||||||||||||| Sbjct: 73569 gctggatggctgggtgcctc 73588
>gb|AC046131.35|AC046131 Homo sapiens 12 BAC RP11-847A19 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 111131 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 204 tcaaaaggaaaagaagaatg 223 |||||||||||||||||||| Sbjct: 2944 tcaaaaggaaaagaagaatg 2925
>gb|AC092162.3| Homo sapiens BAC clone RP11-632P5 from 2, complete sequence Length = 155011 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 caataaatcatgaatccata 54 |||||||||||||||||||| Sbjct: 83037 caataaatcatgaatccata 83056
>gb|AC112721.3| Homo sapiens BAC clone RP11-704F14 from 2, complete sequence Length = 188829 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 448 tggctgggtgcctcctttct 467 |||||||||||||||||||| Sbjct: 89077 tggctgggtgcctcctttct 89058
>gb|AC154818.2| Mus musculus BAC clone RP23-73C20 from chromosome 16, complete sequence Length = 183223 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 201 ttttcaaaaggaaaagaaga 220 |||||||||||||||||||| Sbjct: 125611 ttttcaaaaggaaaagaaga 125592
>gb|AC137484.2| Rattus Norvegicus Strain BN/SsNHsd/MCW BAC, CH230-349A03, complete sequence Length = 164897 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 21 cgcacacacgcacacaataa 40 |||||||||||||||||||| Sbjct: 14382 cgcacacacgcacacaataa 14401
>gb|AC153962.3| Mus musculus 10 BAC RP24-347C6 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 147491 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 205 caaaaggaaaagaagaatgt 224 |||||||||||||||||||| Sbjct: 4921 caaaaggaaaagaagaatgt 4940
>emb|AL163153.4|CNS01RIE Human chromosome 14 DNA sequence BAC R-16O13 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 166562 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 498 taagggagaggaggctgggc 517 |||||||||||||||||||| Sbjct: 151991 taagggagaggaggctgggc 151972
>gb|AC115018.7| Mus musculus chromosome 3, clone RP24-221D2, complete sequence Length = 164720 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 205 caaaaggaaaagaagaatgt 224 |||||||||||||||||||| Sbjct: 89350 caaaaggaaaagaagaatgt 89331
>emb|CT476831.7| Mouse DNA sequence from clone RP23-414J18 on chromosome 16, complete sequence Length = 193062 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 205 caaaaggaaaagaagaatgt 224 |||||||||||||||||||| Sbjct: 3531 caaaaggaaaagaagaatgt 3550
>gb|AC151720.2| Mus musculus BAC clone RP23-44P12 from 7, complete sequence Length = 233007 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 205 caaaaggaaaagaagaatgt 224 |||||||||||||||||||| Sbjct: 220168 caaaaggaaaagaagaatgt 220149
>emb|AL935147.9| Mouse DNA sequence from clone RP23-33O19 on chromosome 2, complete sequence Length = 241249 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 205 caaaaggaaaagaagaatgt 224 |||||||||||||||||||| Sbjct: 189668 caaaaggaaaagaagaatgt 189687
>gb|AF007560.1|AF007560 Mus musculus presenilin-1 gene, alternatively spliced transcripts, complete cds Length = 48974 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 gcgcacacacgcacacaata 39 |||||||||||||||||||| Sbjct: 23720 gcgcacacacgcacacaata 23701
>emb|AL773530.9| Mouse DNA sequence from clone RP23-180A8 on chromosome 2, complete sequence Length = 188424 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 aaaaggaaaagaagaatgtc 225 |||||||||||||||||||| Sbjct: 116127 aaaaggaaaagaagaatgtc 116108
>emb|AL356800.4|CNS05TDI Human chromosome 14 DNA sequence BAC R-97N10 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 163152 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 498 taagggagaggaggctgggc 517 |||||||||||||||||||| Sbjct: 5556 taagggagaggaggctgggc 5537
>gb|AC153959.3| Mus musculus 10 BAC RP24-511J14 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 165278 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 205 caaaaggaaaagaagaatgt 224 |||||||||||||||||||| Sbjct: 153012 caaaaggaaaagaagaatgt 153031
>emb|AL928557.6| Mouse DNA sequence from clone RP23-349H7 on chromosome 2, complete sequence Length = 159128 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 cacacacgcacacaataaat 42 |||||||||||||||||||| Sbjct: 55666 cacacacgcacacaataaat 55647
>emb|AL844199.8| Mouse DNA sequence from clone RP23-39F22 on chromosome 4, complete sequence Length = 205589 Score = 40.1 bits (20), Expect = 8.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 205 caaaaggaaaagaagaatgt 224 |||||||||||||||||||| Sbjct: 55642 caaaaggaaaagaagaatgt 55623
>emb|AL833797.6| Mouse DNA sequence from clone RP23-89B11 on chromosome 2, complete sequence Length = 165400 Score = 40.1 bits (20), Expect = 8.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 23 cacacacgcacacaataaatcatgaatc 50 ||||||| |||||| ||||||||||||| Sbjct: 50225 cacacacacacacactaaatcatgaatc 50252 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,566,158 Number of Sequences: 3902068 Number of extensions: 6566158 Number of successful extensions: 206773 Number of sequences better than 10.0: 129 Number of HSP's better than 10.0 without gapping: 131 Number of HSP's successfully gapped in prelim test: 10 Number of HSP's that attempted gapping in prelim test: 205461 Number of HSP's gapped (non-prelim): 1319 length of query: 646 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 623 effective length of database: 17,143,297,704 effective search space: 10680274469592 effective search space used: 10680274469592 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
