| Clone Name | rbags12d16 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | SCNAA_XENLA (P51167) Amiloride-sensitive sodium channel alpha-su... | 30 | 5.9 | 2 | B3A3_MOUSE (P16283) Anion exchange protein 3 (Neuronal band 3-li... | 29 | 7.8 |
|---|
>SCNAA_XENLA (P51167) Amiloride-sensitive sodium channel alpha-subunit| (Epithelial Na+ channel alpha subunit) (Alpha ENaC) (Nonvoltage-gated sodium channel 1 alpha subunit) (SCNEA) (Alpha NaCH) Length = 632 Score = 29.6 bits (65), Expect = 5.9 Identities = 14/38 (36%), Positives = 19/38 (50%) Frame = +3 Query: 234 MMIVRRQQEKKEELGEPNYLTRFPAPAFGDRSFMNPHV 347 M+++ R KK GE + PAPAF D PH+ Sbjct: 540 MILLHRYYYKKANEGEETTVVPTPAPAFADLEQQVPHI 577
>B3A3_MOUSE (P16283) Anion exchange protein 3 (Neuronal band 3-like protein)| (Solute carrier family 4 member 3) Length = 1227 Score = 29.3 bits (64), Expect = 7.8 Identities = 11/29 (37%), Positives = 18/29 (62%) Frame = +3 Query: 51 HRNTENXTHNATQTQPQPGHRVRRPGDTT 137 HR+T + TH+ + P H++RRP T+ Sbjct: 74 HRHTSHHTHHPLSARLPPPHKLRRPPPTS 102 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 61,826,707 Number of Sequences: 219361 Number of extensions: 1020753 Number of successful extensions: 2328 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 2285 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2328 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4488201198 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)