>YT35_STRFR (P20186) Hypothetical 35.5 kDa protein in transposon Tn4556|
          Length = 348

 Score = 32.7 bits (73), Expect = 0.81
 Identities = 29/80 (36%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
 Frame = +3

Query: 324 TNMLLNASSSALRLPNSAVQPPARAPLSARSRMVSSSYPCRGS-DGPPIGCGA-LPVGRG 497
           T   L+ SSS  R P   VQP + APL+AR         C  S  G P   G+ LP  R 
Sbjct: 187 TGPRLSRSSSETRSPGGTVQPKSPAPLAAR---------CSASRAGCPTAAGSLLPAPR- 236

Query: 498 *FNPPGTAAGAYWP*TPAPP 557
              PP ++A +     PA P
Sbjct: 237 ---PPASSASSPQAAAPAAP 253

>IAA29_ARATH (Q93WC4) Auxin-responsive protein IAA29 (Indoleacetic acid-induced|
           protein 29)
          Length = 251

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 17/29 (58%), Positives = 21/29 (72%), Gaps = 3/29 (10%)
 Frame = +2

Query: 506 PTRNRGRRILALN---SRPTTNTLGASSS 583
           P  +RGRRI A+N   S PTT T+G+SSS
Sbjct: 123 PYHHRGRRITAMNNNISNPTTATVGSSSS 151

>POLR_ELV (P35928) RNA replicase polyprotein (EC 2.7.7.48)|
          Length = 1748

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 26/83 (31%), Positives = 40/83 (48%)
 Frame = +3

Query: 330 MLLNASSSALRLPNSAVQPPARAPLSARSRMVSSSYPCRGSDGPPIGCGALPVGRG*FNP 509
           +LL++ SS L  P+S +QPPA   ++A      + +P   +  PP     +P  +   +P
Sbjct: 552 LLLDSHSSFL--PSSCLQPPASPSIAA------APHPLPPAQKPPRPPTTVPTPKPLASP 603

Query: 510 PGTAAGAYWP*TPAPPLIPWELP 578
             T A    P T +PP IP   P
Sbjct: 604 SQTQAAQ--PATQSPPSIPQTAP 624

>PRA_MYCTU (O53426) Proline-rich antigen homolog|
          Length = 240

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 22/65 (33%), Positives = 27/65 (41%)
 Frame = +3

Query: 366 PNSAVQPPARAPLSARSRMVSSSYPCRGSDGPPIGCGALPVGRG*FNPPGTAAGAYWP*T 545
           P+   +PP  AP    S       P  GS  PP      P G G + PP  +AG Y P  
Sbjct: 20  PSGGHEPPPAAPPGG-SGYAPPPPPSSGSGYPP---PPPPPGGGAYPPPPPSAGGYAPPP 75

Query: 546 PAPPL 560
           P P +
Sbjct: 76  PGPAI 80

>PALI_NEUCR (Q7SFN5) pH-response regulator protein palI/rim-9|
          Length = 705

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 21/54 (38%), Positives = 24/54 (44%), Gaps = 3/54 (5%)
 Frame = +3

Query: 387 PARAPLSARSR--MVSSSYPCRGS-DGPPIGCGALPVGRG*FNPPGTAAGAYWP 539
           P    L++R R  M    Y  RG   GP  G G    GRG + PPG   G Y P
Sbjct: 316 PQNERLNSRGRGGMPPGGYRGRGGFPGPGRGGGPPQNGRGGYGPPGRGRGGYGP 369

>DGKI_HUMAN (O75912) Diacylglycerol kinase iota (EC 2.7.1.107) (Diglyceride|
           kinase iota) (DGK-iota) (DAG kinase iota)
          Length = 1065

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 19/53 (35%), Positives = 25/53 (47%)
 Frame = +3

Query: 363 LPNSAVQPPARAPLSARSRMVSSSYPCRGSDGPPIGCGALPVGRG*FNPPGTA 521
           LP  A + PARAP +A +   S   PC G+   P    +   G G  NP  +A
Sbjct: 11  LPLPAARGPARAPAAAAAAAASPPGPCSGAACAP----SAAAGAGAMNPSSSA 59

>MURD_SYNP6 (Q5MZA8) UDP-N-acetylmuramoylalanine--D-glutamate ligase (EC|
           6.3.2.9) (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate
           synthetase) (D-glutamic acid-adding enzyme)
          Length = 463

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
 Frame = -1

Query: 396 LGQVVGLLSWAGEEH*RRHLTAYSYKKVRSGAAAVLEDAWLTYDDPYTTAHSCPAITCWL 217
           L   +GL +    +H  RH T  +Y  +++      +   L  DDPY       A     
Sbjct: 181 LAATIGLWTTFTPDHLNRHYTLENYFTIKASLLDRAQQQVLNGDDPYLRNQ---ANATSR 237

Query: 216 WPI-FWTSSR 190
           WP+ FWTS++
Sbjct: 238 WPLAFWTSTQ 247

>CREB5_HUMAN (Q02930) cAMP response element-binding protein 5 (CRE-BPa)|
          Length = 508

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 14/28 (50%), Positives = 14/28 (50%)
 Frame = +1

Query: 508 HQEPRQAHTGLELPPHH*YPGSFQQPYH 591
           H  P Q  T   LPPHH YP   Q P H
Sbjct: 275 HSHPHQHQT---LPPHHPYPHQHQHPAH 299

>CREB5_MOUSE (Q8K1L0) cAMP response element-binding protein 5 (CRE-BPa)|
           (Fragment)
          Length = 353

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 14/28 (50%), Positives = 14/28 (50%)
 Frame = +1

Query: 508 HQEPRQAHTGLELPPHH*YPGSFQQPYH 591
           H  P Q  T   LPPHH YP   Q P H
Sbjct: 120 HSHPHQHQT---LPPHHPYPHQHQHPAH 144

>YL_DROME (P98163) Putative vitellogenin receptor precursor (Protein yolkless)|
            (YL)
          Length = 1984

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 17/55 (30%), Positives = 26/55 (47%)
 Frame = +3

Query: 333  LLNASSSALRLPNSAVQPPARAPLSARSRMVSSSYPCRGSDGPPIGCGALPVGRG 497
            ++     A  +P   V  P   PL+A S +   S+PC+  +G   GC  + VG G
Sbjct: 952  IMEKDDPAAIMPYVPVATPNGIPLAASSPVGQESHPCQQQNG---GCSHICVGEG 1003

>BLNK_HUMAN (Q8WV28) B-cell linker protein (Cytoplasmic adapter protein)|
           (B-cell adapter containing SH2 domain protein) (B-cell
           adapter containing Src homology 2 domain protein) (Src
           homology 2 domain-containing leukocyte protein of 65
           kDa) (SLP-65)
          Length = 456

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 23/74 (31%), Positives = 29/74 (39%), Gaps = 3/74 (4%)
 Frame = +3

Query: 372 SAVQPPARAPLSARSRMVSSSYPCRGSDGPPIGCGALPVGRG*FNPPGTAAG---AYWP* 542
           S+  PP +AP+  RS   +SS P                     +PPGTA+G     W  
Sbjct: 195 SSSPPPEKAPMVNRSTKPNSSTPA--------------------SPPGTASGRNSGAWET 234

Query: 543 TPAPPLIPWELPAA 584
              PP  P  LP A
Sbjct: 235 KSPPPAAPSPLPRA 248

>YMA1_MYCBO (Q02277) Putative mycocerosyl transferase in mas 5'region|
          Length = 272

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
 Frame = +3

Query: 375 AVQPPARAPLSARSRMVSSSYPCRGSDGPP---IGCGALPVGRG 497
           AV   +R+ + A+S + SS+  CR + GPP   +GC   P  RG
Sbjct: 143 AVGVCSRSAVLAKSHLASSAGVCRLAMGPPSDTVGCDVAPPPRG 186

>IE18_PRVIF (P11675) Immediate-early protein IE180|
          Length = 1461

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 25/67 (37%), Positives = 29/67 (43%)
 Frame = +3

Query: 384 PPARAPLSARSRMVSSSYPCRGSDGPPIGCGALPVGRG*FNPPGTAAGAYWP*TPAPPLI 563
           P A +P S+ S    SS    GS GP          RG  +P G    A  P TPAPP  
Sbjct: 170 PSAASPASSSSGSSGSS----GSPGPSAAPRRWSPARG--DPVGEPGPAARPRTPAPPAQ 223

Query: 564 PWELPAA 584
           P  + AA
Sbjct: 224 PAAVAAA 230

>BARH1_DROAN (P22544) Homeobox protein B-H1 (Homeobox BarH1 protein)|
          Length = 606

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 18/38 (47%), Positives = 19/38 (50%), Gaps = 7/38 (18%)
 Frame = -3

Query: 529 APAAVPGGLNQPRP-------TGNAPQPIGGPSDPLHG 437
           A AA PGG   P P       TG +P PIGG   PL G
Sbjct: 507 AAAANPGGPPPPPPPSSAAAATGGSPSPIGGLIKPLAG 544

>BEH1_ARATH (Q9S7F3) BES1/BZR1 homolog protein 1|
          Length = 276

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
 Frame = +3

Query: 276 TMHPPGQLLRLI*PFYTNMLLNASSSALRLPNSA-VQPPARAPLSARSRM---VSSSYPC 443
           T   P Q    + P+  N+  + + + LR+ NSA V PP  +P  +  R+    SS++P 
Sbjct: 123 TRFDPNQSSTYLIPYLQNLASSGNLAPLRISNSAPVTPPISSPRRSNPRLPRWQSSNFPV 182

Query: 444 RGSDGP 461
                P
Sbjct: 183 SAPSSP 188

>CO9A3_CHICK (P32017) Collagen alpha-3(IX) chain precursor|
          Length = 675

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 16/37 (43%), Positives = 18/37 (48%)
 Frame = +3

Query: 447 GSDGPPIGCGALPVGRG*FNPPGTAAGAYWP*TPAPP 557
           G  GPP G   LP G G   PPG +    +P  P PP
Sbjct: 117 GPPGPP-GPSGLPGGNGFRGPPGPSGLPGFPGPPGPP 152

>TIPT_DROME (Q9U3V5) Protein tiptop|
          Length = 1024

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 17/42 (40%), Positives = 22/42 (52%)
 Frame = +3

Query: 339  NASSSALRLPNSAVQPPARAPLSARSRMVSSSYPCRGSDGPP 464
            +A   + RL + AVQ P   PL++  R  S S P  GS  PP
Sbjct: 953  DAGEDSPRLKSPAVQSPRSMPLASPRRSASRS-PATGSQQPP 993

>KSYK_RAT (Q64725) Tyrosine-protein kinase SYK (EC 2.7.10.2) (Spleen tyrosine|
           kinase)
          Length = 629

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 19/57 (33%), Positives = 25/57 (43%)
 Frame = +3

Query: 369 NSAVQPPARAPLSARSRMVSSSYPCRGSDGPPIGCGALPVGRG*FNPPGTAAGAYWP 539
           +S   P   +P    SR+ S S+P  G   PP   G+ P     FNP     GA+ P
Sbjct: 270 SSNAHPVTWSPGGIISRIKSYSFPKPGHKKPPPPQGSRPESTVSFNPYEPTGGAWGP 326

>RFX5_HUMAN (P48382) DNA-binding protein RFX5 (Regulatory factor X subunit 5)|
          Length = 616

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 14/25 (56%), Positives = 14/25 (56%)
 Frame = -3

Query: 520 AVPGGLNQPRPTGNAPQPIGGPSDP 446
           A PGGL QPR T N    IGG   P
Sbjct: 401 APPGGLTQPRGTENREVGIGGDQGP 425


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 91,310,188
Number of Sequences: 219361
Number of extensions: 1999952
Number of successful extensions: 6283
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 5861
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6275
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5196311029
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)