ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags12d07 |
|---|---|
| Clone Library Name | barley_pub |
>NCB5R_ARATH (P83291) NADH-cytochrome b5 reductase-like protein (EC 1.6.2.2)| (B5R) Length = 328 Score = 119 bits (298), Expect = 3e-27 Identities = 53/72 (73%), Positives = 63/72 (87%) Frame = -2 Query: 450 PSSDWRGGVGYISKDMVLKGLPGPGEDSLILVCGPPGMMNHISGDKAKDYSQGEVTGLLK 271 P+ +W+GGVGYISKDM LKGLP P +D+LILVCGPPGMM HISG KA D+SQGEV G+LK Sbjct: 257 PTKNWKGGVGYISKDMALKGLPLPTDDTLILVCGPPGMMEHISGGKAPDWSQGEVKGILK 316 Query: 270 DLGYTSQMVYKF 235 +LGYT +MV+KF Sbjct: 317 ELGYTEEMVFKF 328
>MCR1_YEAST (P36060) NADH-cytochrome b5 reductase precursor (EC 1.6.2.2)| (p34/p32) [Contains: NADH-cytochrome b5 reductase p34 form; NADH-cytochrome b5 reductase p32 form] Length = 302 Score = 72.0 bits (175), Expect = 6e-13 Identities = 31/69 (44%), Positives = 45/69 (65%) Frame = -2 Query: 441 DWRGGVGYISKDMVLKGLPGPGEDSLILVCGPPGMMNHISGDKAKDYSQGEVTGLLKDLG 262 D+ G + +ISKD + + +PGP E + + VCGPP MN SG+K QGE+ G+L +LG Sbjct: 234 DFDGEISFISKDFIQEHVPGPKESTHLFVCGPPPFMNAYSGEKKSPKDQGELIGILNNLG 293 Query: 261 YTSQMVYKF 235 Y+ V+KF Sbjct: 294 YSKDQVFKF 302
>YMM5_YEAST (Q12746) Hypothetical 35.3 kDa protein in HMGS-TUB3 intergenic| region Length = 312 Score = 48.9 bits (115), Expect = 6e-06 Identities = 21/40 (52%), Positives = 27/40 (67%) Frame = -2 Query: 450 PSSDWRGGVGYISKDMVLKGLPGPGEDSLILVCGPPGMMN 331 PS W G VGYI+KD + + LP ED+ +L+CGP GM N Sbjct: 246 PSDRWTGDVGYITKDQMNRYLPEYSEDNRLLICGPDGMNN 285
>NCB5R_YEAST (P38626) Putative NADH-cytochrome b5 reductase (EC 1.6.2.2) (P35)| Length = 322 Score = 47.0 bits (110), Expect = 2e-05 Identities = 20/37 (54%), Positives = 28/37 (75%), Gaps = 1/37 (2%) Frame = -2 Query: 441 DWRGGVGYISKDMVLKGLPGPGEDSL-ILVCGPPGMM 334 DW GGVGYI+KD++ + LP D++ IL+CGPP M+ Sbjct: 258 DWTGGVGYITKDVIKEHLPAATMDNVQILICGPPAMV 294
>NIA1_ORYSA (P16081) Nitrate reductase [NADH] 1 (EC 1.7.1.1) (NR1)| Length = 916 Score = 43.1 bits (100), Expect = 3e-04 Identities = 15/39 (38%), Positives = 28/39 (71%) Frame = -2 Query: 450 PSSDWRGGVGYISKDMVLKGLPGPGEDSLILVCGPPGMM 334 P W+ GVG+++++++ + +P G+D+L L CGPP M+ Sbjct: 856 PEEGWKYGVGFVTEEVLREHVPEGGDDTLALACGPPPMI 894
>NCB5R_RAT (P20070) NADH-cytochrome b5 reductase (EC 1.6.2.2) (B5R)| (Diaphorase-1) (Cytochrome b5 reductase 3) [Contains: NADH-cytochrome b5 reductase membrane-bound form; NADH-cytochrome b5 reductase soluble form] Length = 300 Score = 42.7 bits (99), Expect = 4e-04 Identities = 16/35 (45%), Positives = 26/35 (74%) Frame = -2 Query: 438 WRGGVGYISKDMVLKGLPGPGEDSLILVCGPPGMM 334 W G+++++M+ LP PGE++LIL+CGPP M+ Sbjct: 245 WDYSQGFVNEEMIRDHLPPPGEETLILMCGPPPMI 279
>YMI7_YEAST (Q04516) Hypothetical 35.8 kDa protein in RPM2-TUB1 intergenic| region Length = 312 Score = 42.0 bits (97), Expect = 7e-04 Identities = 16/38 (42%), Positives = 24/38 (63%) Frame = -2 Query: 450 PSSDWRGGVGYISKDMVLKGLPGPGEDSLILVCGPPGM 337 P+ W G VGY++ + + + LP ED +L+CGPP M Sbjct: 246 PNGKWNGDVGYVTLEEMKRYLPKQAEDHRLLICGPPKM 283
>NCB5R_MOUSE (Q9DCN2) NADH-cytochrome b5 reductase (EC 1.6.2.2) (B5R)| (Diaphorase-1) (Cytochrome b5 reductase 3) [Contains: NADH-cytochrome b5 reductase membrane-bound form; NADH-cytochrome b5 reductase soluble form] Length = 300 Score = 42.0 bits (97), Expect = 7e-04 Identities = 16/35 (45%), Positives = 25/35 (71%) Frame = -2 Query: 438 WRGGVGYISKDMVLKGLPGPGEDSLILVCGPPGMM 334 W G+++++M+ LP PGE+ LIL+CGPP M+ Sbjct: 245 WDYSQGFVNEEMIRDHLPTPGEEPLILMCGPPPMI 279
>NIA2_HORVU (P27969) Nitrate reductase [NADH] (EC 1.7.1.1) (NR) (Fragment)| Length = 912 Score = 41.6 bits (96), Expect = 0.001 Identities = 15/39 (38%), Positives = 26/39 (66%) Frame = -2 Query: 450 PSSDWRGGVGYISKDMVLKGLPGPGEDSLILVCGPPGMM 334 P W+ VG++++D++ +P G+D+L L CGPP M+ Sbjct: 852 PEDGWKFSVGFVTEDILRAHVPEGGDDTLALACGPPPMI 890
>NCB5R_HUMAN (P00387) NADH-cytochrome b5 reductase (EC 1.6.2.2) (B5R)| (Diaphorase-1) (Cytochrome b5 reductase 3) [Contains: NADH-cytochrome b5 reductase membrane-bound form; NADH-cytochrome b5 reductase soluble form] Length = 300 Score = 41.6 bits (96), Expect = 0.001 Identities = 15/37 (40%), Positives = 26/37 (70%) Frame = -2 Query: 438 WRGGVGYISKDMVLKGLPGPGEDSLILVCGPPGMMNH 328 W G G+++++M+ LP P E+ L+L+CGPP M+ + Sbjct: 245 WDYGQGFVNEEMIRDHLPPPEEEPLVLMCGPPPMIQY 281
>NIA1_HORVU (P27967) Nitrate reductase [NADH] (EC 1.7.1.1) (NR)| Length = 915 Score = 41.6 bits (96), Expect = 0.001 Identities = 15/39 (38%), Positives = 26/39 (66%) Frame = -2 Query: 450 PSSDWRGGVGYISKDMVLKGLPGPGEDSLILVCGPPGMM 334 P W+ VG++++D++ +P G+D+L L CGPP M+ Sbjct: 855 PEDGWKFSVGFVTEDILRAHVPEGGDDTLALACGPPPMI 893
>NIA1_MAIZE (P17571) Nitrate reductase [NADH] (EC 1.7.1.1) (NR) (Fragment)| Length = 621 Score = 39.3 bits (90), Expect = 0.005 Identities = 14/39 (35%), Positives = 26/39 (66%) Frame = -2 Query: 450 PSSDWRGGVGYISKDMVLKGLPGPGEDSLILVCGPPGMM 334 P W+ VG++++ ++ + +P G+D+L L CGPP M+ Sbjct: 561 PEEGWKYSVGFVTEAVLREHVPEGGDDTLALACGPPPMI 599
>NCB5R_MACFA (Q60HG4) NADH-cytochrome b5 reductase (EC 1.6.2.2) (B5R)| (Diaphorase-1) (Cytochrome b5 reductase 3) [Contains: NADH-cytochrome b5 reductase membrane-bound form; NADH-cytochrome b5 reductase soluble form] Length = 300 Score = 39.3 bits (90), Expect = 0.005 Identities = 14/37 (37%), Positives = 25/37 (67%) Frame = -2 Query: 438 WRGGVGYISKDMVLKGLPGPGEDSLILVCGPPGMMNH 328 W G+++++M+ LP P E+ L+L+CGPP M+ + Sbjct: 245 WDYSQGFVNEEMIRDHLPPPEEEPLVLMCGPPPMIQY 281
>NCB5R_BOVIN (P07514) NADH-cytochrome b5 reductase (EC 1.6.2.2) (B5R)| (Diaphorase-1) (Cytochrome b5 reductase 3) [Contains: NADH-cytochrome b5 reductase membrane-bound form; NADH-cytochrome b5 reductase soluble form] Length = 300 Score = 39.3 bits (90), Expect = 0.005 Identities = 14/37 (37%), Positives = 25/37 (67%) Frame = -2 Query: 438 WRGGVGYISKDMVLKGLPGPGEDSLILVCGPPGMMNH 328 W G+++++M+ LP P E+ L+L+CGPP M+ + Sbjct: 245 WDYSQGFVNEEMIRDHLPPPEEEPLVLMCGPPPMIQY 281
>NCB5R_PIG (P83686) NADH-cytochrome b5 reductase (EC 1.6.2.2) (B5R)| (Diaphorase-1) (Cytochrome b5 reductase 3) (Fragment) Length = 272 Score = 39.3 bits (90), Expect = 0.005 Identities = 14/37 (37%), Positives = 25/37 (67%) Frame = -2 Query: 438 WRGGVGYISKDMVLKGLPGPGEDSLILVCGPPGMMNH 328 W G+++++M+ LP P E+ L+L+CGPP M+ + Sbjct: 217 WDYSQGFVNEEMIRDHLPPPEEEPLVLMCGPPPMIQY 253
>NIA_CUCMA (P17569) Nitrate reductase [NADH] (EC 1.7.1.1) (NR)| Length = 918 Score = 38.9 bits (89), Expect = 0.006 Identities = 14/35 (40%), Positives = 24/35 (68%) Frame = -2 Query: 438 WRGGVGYISKDMVLKGLPGPGEDSLILVCGPPGMM 334 W VG+I+++++ + +P ED+L L CGPP M+ Sbjct: 862 WEYSVGFITENILREHIPAAAEDTLALACGPPAMI 896
>CYC2_YEAST (P38909) Cytochrome c mitochondrial import factor CYC2| Length = 404 Score = 38.9 bits (89), Expect = 0.006 Identities = 22/43 (51%), Positives = 26/43 (60%) Frame = -2 Query: 366 LILVCGPPGMMNHISGDKAKDYSQGEVTGLLKDLGYTSQMVYK 238 L LVCGP ++ ISG K D +QG V GLL G+ S VYK Sbjct: 361 LALVCGPESYISSISGRKY-DLNQGPVGGLLSKEGWNSDNVYK 402
>NIA_LOTJA (P39869) Nitrate reductase [NADH] (EC 1.7.1.1) (NR)| Length = 900 Score = 37.4 bits (85), Expect = 0.017 Identities = 14/35 (40%), Positives = 24/35 (68%) Frame = -2 Query: 438 WRGGVGYISKDMVLKGLPGPGEDSLILVCGPPGMM 334 W VG++++ ++ + LP G+D+L L CGPP M+ Sbjct: 844 WGYSVGFVTEGVMREHLPEAGDDALALACGPPPMI 878
>NIA2_PHAVU (P39866) Nitrate reductase [NADH] 2 (EC 1.7.1.1) (NR-2)| Length = 890 Score = 37.0 bits (84), Expect = 0.023 Identities = 15/35 (42%), Positives = 23/35 (65%) Frame = -2 Query: 438 WRGGVGYISKDMVLKGLPGPGEDSLILVCGPPGMM 334 W GVG+I++ ++ + LP DSL + CGPP M+ Sbjct: 834 WGYGVGFITEAIMREHLPEASSDSLAMTCGPPPMI 868
>NIA_CICIN (P43101) Nitrate reductase [NADH] (EC 1.7.1.1) (NR)| Length = 920 Score = 37.0 bits (84), Expect = 0.023 Identities = 14/35 (40%), Positives = 24/35 (68%) Frame = -2 Query: 438 WRGGVGYISKDMVLKGLPGPGEDSLILVCGPPGMM 334 W+ G+I++D++ + +P ED+L L CGPP M+ Sbjct: 864 WKYSEGFITEDIMREHVPEVSEDTLALACGPPPMI 898
>NIA1_SOYBN (P54233) Inducible nitrate reductase [NADH] 1 (EC 1.7.1.1) (NR)| Length = 886 Score = 36.6 bits (83), Expect = 0.030 Identities = 20/63 (31%), Positives = 31/63 (49%) Frame = -2 Query: 438 WRGGVGYISKDMVLKGLPGPGEDSLILVCGPPGMMNHISGDKAKDYSQGEVTGLLKDLGY 259 W VG+I++ ++ + +P D+L L CGPP M+ Q V L+ LGY Sbjct: 830 WEYSVGFITESILTEHIPNASPDTLALTCGPPPMI------------QFAVQPNLEKLGY 877 Query: 258 TSQ 250 +Q Sbjct: 878 DTQ 880
>NIA2_SOYBN (P39870) Inducible nitrate reductase [NADH] 2 (EC 1.7.1.1) (NR)| Length = 890 Score = 36.6 bits (83), Expect = 0.030 Identities = 20/63 (31%), Positives = 31/63 (49%) Frame = -2 Query: 438 WRGGVGYISKDMVLKGLPGPGEDSLILVCGPPGMMNHISGDKAKDYSQGEVTGLLKDLGY 259 W VG+I++ ++ + +P D+L L CGPP M+ Q V L+ LGY Sbjct: 834 WEYSVGFITESILTEHIPNASPDTLALTCGPPPMI------------QFAVQPNLEKLGY 881 Query: 258 TSQ 250 +Q Sbjct: 882 DTQ 884
>NIA2_MAIZE (P39871) Nitrate reductase [NAD(P)H] (EC 1.7.1.2) (NR) (Fragment)| Length = 231 Score = 35.8 bits (81), Expect = 0.050 Identities = 14/39 (35%), Positives = 23/39 (58%) Frame = -2 Query: 450 PSSDWRGGVGYISKDMVLKGLPGPGEDSLILVCGPPGMM 334 P W GVG + + ++ + LP +++ LVCGPP M+ Sbjct: 171 PEDGWEYGVGRVDEHVMREHLPLGDSETIALVCGPPAMI 209
>NIA_SPIOL (P23312) Nitrate reductase [NADH] (EC 1.7.1.1) (NR)| Length = 926 Score = 35.8 bits (81), Expect = 0.050 Identities = 14/35 (40%), Positives = 22/35 (62%) Frame = -2 Query: 438 WRGGVGYISKDMVLKGLPGPGEDSLILVCGPPGMM 334 W+ G+IS+ ++ +P G+D L L CGPP M+ Sbjct: 870 WKYDTGFISEKILRDHVPAVGDDVLALTCGPPPMI 904
>NIA7_HORVU (P27968) Nitrate reductase [NAD(P)H] (EC 1.7.1.2)| Length = 891 Score = 35.8 bits (81), Expect = 0.050 Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 1/40 (2%) Frame = -2 Query: 450 PSSDWRGGVGYISKDMVLKGLPGPGE-DSLILVCGPPGMM 334 P W GVG + + ++ + LP G+ ++L LVCGPP M+ Sbjct: 830 PEDAWEYGVGRVDEQVLREHLPLGGDGETLALVCGPPAML 869
>NIA1_TOBAC (P11605) Nitrate reductase [NADH] 1 (EC 1.7.1.1) (NR1)| Length = 904 Score = 35.4 bits (80), Expect = 0.066 Identities = 13/35 (37%), Positives = 23/35 (65%) Frame = -2 Query: 438 WRGGVGYISKDMVLKGLPGPGEDSLILVCGPPGMM 334 W+ +G+IS+ ++ + +P P +L L CGPP M+ Sbjct: 848 WKYSLGFISEAILREHIPEPSHTTLALACGPPPMI 882
>NIA_LEPMC (P36842) Nitrate reductase [NADPH] (EC 1.7.1.3) (NR)| Length = 893 Score = 35.4 bits (80), Expect = 0.066 Identities = 17/40 (42%), Positives = 23/40 (57%) Frame = -2 Query: 438 WRGGVGYISKDMVLKGLPGPGEDSLILVCGPPGMMNHISG 319 W G G I +++ LK G ED L+LVCGP G+ + G Sbjct: 840 WTGRRGRIGEEL-LKEFCGTEEDGLVLVCGPEGLERSVKG 878
>NIA2_TOBAC (P08509) Nitrate reductase [NADH] 2 (EC 1.7.1.1) (NR2)| Length = 904 Score = 35.0 bits (79), Expect = 0.086 Identities = 12/35 (34%), Positives = 23/35 (65%) Frame = -2 Query: 438 WRGGVGYISKDMVLKGLPGPGEDSLILVCGPPGMM 334 W+ +G+I++ ++ + +P P +L L CGPP M+ Sbjct: 848 WKYSIGFITEAILREHIPEPSHTTLALACGPPPMI 882
>NIA_VOLCA (P36841) Nitrate reductase [NADH] (EC 1.7.1.1) (NR)| Length = 864 Score = 35.0 bits (79), Expect = 0.086 Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 1/72 (1%) Frame = -2 Query: 447 SSDWRGGVGYISKDMVLKGLPG-PGEDSLILVCGPPGMMNHISGDKAKDYSQGEVTGLLK 271 SSDW+ G ++ +M + L G + L L+CGPP M+ H L+ Sbjct: 805 SSDWKFSTGRVTLEMFKQHLFACSGPECLALMCGPPAMLEHC------------CVPFLE 852 Query: 270 DLGYTSQMVYKF 235 +GY+ + + F Sbjct: 853 SMGYSKEQMIHF 864
>NIA_LYCES (P17570) Nitrate reductase [NADH] (EC 1.7.1.1) (NR)| Length = 911 Score = 34.3 bits (77), Expect = 0.15 Identities = 11/35 (31%), Positives = 22/35 (62%) Frame = -2 Query: 438 WRGGVGYISKDMVLKGLPGPGEDSLILVCGPPGMM 334 W+ G++++ ++ + +P P +L L CGPP M+ Sbjct: 855 WKYSTGFVTESILREHIPEPSHTTLALACGPPPMI 889
>NIA_PETHY (P36859) Nitrate reductase [NADH] (EC 1.7.1.1) (NR)| Length = 909 Score = 33.9 bits (76), Expect = 0.19 Identities = 12/35 (34%), Positives = 23/35 (65%) Frame = -2 Query: 438 WRGGVGYISKDMVLKGLPGPGEDSLILVCGPPGMM 334 W+ G+I++ ++ + +P P + +L L CGPP M+ Sbjct: 853 WKYSTGFITEAVLREHIPLPSQTTLALACGPPPMI 887
>NIA1_PHAVU (P39865) Nitrate reductase [NADH] 1 (EC 1.7.1.1) (NR-1)| Length = 881 Score = 33.5 bits (75), Expect = 0.25 Identities = 13/35 (37%), Positives = 22/35 (62%) Frame = -2 Query: 438 WRGGVGYISKDMVLKGLPGPGEDSLILVCGPPGMM 334 W VG+I++ ++ + +P D+L L CGPP M+ Sbjct: 825 WEYSVGFITESILREHVPLASPDTLALTCGPPPMI 859
>NIA_LOTTE (P39882) Nitrate reductase [NADH] (EC 1.7.1.1) (NR) (Fragment)| Length = 160 Score = 33.1 bits (74), Expect = 0.33 Identities = 14/34 (41%), Positives = 21/34 (61%) Frame = -2 Query: 444 SDWRGGVGYISKDMVLKGLPGPGEDSLILVCGPP 343 +DW G +++ ++ LPGP D+L L CGPP Sbjct: 97 NDWAFSTGRVNESIMRVHLPGP-SDALALACGPP 129
>NIA_FUSOX (P39863) Nitrate reductase [NADPH] (EC 1.7.1.3) (NR)| Length = 905 Score = 33.1 bits (74), Expect = 0.33 Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 4/46 (8%) Frame = -2 Query: 450 PSSDWRGGVGYISKDMVLKGLPGP---GE-DSLILVCGPPGMMNHI 325 P +W G G++++ +V + + P GE D L+LVCGPP M+ + Sbjct: 843 PPPEWNGLKGFVNQALVPEYMDLPKASGEGDELLLVCGPPPMVKAV 888
>NIA_NEUCR (P08619) Nitrate reductase [NADPH] (EC 1.7.1.3) (NR)| Length = 982 Score = 32.7 bits (73), Expect = 0.43 Identities = 15/45 (33%), Positives = 28/45 (62%), Gaps = 3/45 (6%) Frame = -2 Query: 450 PSSDWRGGVGYISKDMVLKGLPGPGE---DSLILVCGPPGMMNHI 325 P ++W G G + K M+ + + G G+ ++++L+CGP GM N + Sbjct: 922 PGAEWEGLRGRLDKTMLEREV-GEGDLRGETMVLLCGPEGMQNMV 965
>NIA_BETVE (P27783) Nitrate reductase [NAD(P)H] (EC 1.7.1.2) (NR)| Length = 898 Score = 32.7 bits (73), Expect = 0.43 Identities = 13/35 (37%), Positives = 20/35 (57%) Frame = -2 Query: 438 WRGGVGYISKDMVLKGLPGPGEDSLILVCGPPGMM 334 W VGYI + ++ + +P +D L L CG P M+ Sbjct: 842 WEYSVGYIRESILREHIPEGSDDVLALACGAPSMI 876
>NIA_EMENI (P22945) Nitrate reductase [NADPH] (EC 1.7.1.3) (NR)| Length = 873 Score = 32.0 bits (71), Expect = 0.73 Identities = 12/37 (32%), Positives = 21/37 (56%) Frame = -2 Query: 447 SSDWRGGVGYISKDMVLKGLPGPGEDSLILVCGPPGM 337 S W G G I ++++ + P ++++LVCGP M Sbjct: 816 SESWTGRRGRIDEELIRQHAGTPDRETMVLVCGPEAM 852
>PLIGB_AGKBL (P82143) Phospholipase A2 inhibitor gamma subunit B precursor| (PLI-gamma B) (Phospholipase A2 inhibitor gamma 20 kDa subunit) Length = 200 Score = 31.6 bits (70), Expect = 0.95 Identities = 19/59 (32%), Positives = 26/59 (44%), Gaps = 3/59 (5%) Frame = +3 Query: 123 CSEFGTNCRGAM---KKKGSAAVYFTAMACQRPLRFRRSTKICIPSVTCTLNL*EGQ*P 290 C + G C G+M K V F + PL F ++K+C S TC L+ E P Sbjct: 25 CMQPGKRCNGSMMTCKDNEDTCVMFQTEVIRAPLSFTFTSKMCSTSDTCHLDYVETNLP 83
>NIA3_MAIZE (P49102) Nitrate reductase [NADH] 3 (EC 1.7.1.1) (NR)| Length = 889 Score = 31.6 bits (70), Expect = 0.95 Identities = 11/36 (30%), Positives = 23/36 (63%) Frame = -2 Query: 441 DWRGGVGYISKDMVLKGLPGPGEDSLILVCGPPGMM 334 +W+ VG +++ ++ +P + +L L+CGPP M+ Sbjct: 832 EWKYSVGIVTEAVLRDDVPEARDGTLALLCGPPSMI 867
>RELN_RAT (P58751) Reelin precursor (EC 3.4.21.-)| Length = 3462 Score = 31.2 bits (69), Expect = 1.2 Identities = 30/113 (26%), Positives = 46/113 (40%), Gaps = 3/113 (2%) Frame = +3 Query: 99 FLQKDAPYCSEFGTNCRGAMKKKGSAAVYFTAMACQRPLRFRRSTKICIPSVTCTLNL*E 278 FL K+ + + G C G ++ VY+T F T++ I Sbjct: 1334 FLVKEGCFPASAGKGCEGNSRELSEPTVYYTG-------DFEEWTRVTIAI--------- 1377 Query: 279 GQ*PR-LVNNPLPYLQICDSSFQEDHKQE*ENPPLGLAN--LSKPCPLICSQH 428 PR L ++ + I +SS Q++ PP GL +S+PCP CS H Sbjct: 1378 ---PRSLASSKTRFRWIQESSSQKNV------PPFGLDGVYISEPCPSYCSGH 1421
>RELN_HUMAN (P78509) Reelin precursor (EC 3.4.21.-)| Length = 3460 Score = 30.0 bits (66), Expect = 2.8 Identities = 31/113 (27%), Positives = 45/113 (39%), Gaps = 3/113 (2%) Frame = +3 Query: 99 FLQKDAPYCSEFGTNCRGAMKKKGSAAVYFTAMACQRPLRFRRSTKICIPSVTCTLNL*E 278 FL K+ Y + G C G ++ +Y T F T+I I Sbjct: 1332 FLVKEGCYPASAGKGCEGNSRELSEPTMYHTG-------DFEEWTRITIVI--------- 1375 Query: 279 GQ*PR-LVNNPLPYLQICDSSFQEDHKQE*ENPPLGLAN--LSKPCPLICSQH 428 PR L ++ + I +SS Q++ PP GL +S+PCP CS H Sbjct: 1376 ---PRSLASSKTRFRWIQESSSQKNV------PPFGLDGVYISEPCPSYCSGH 1419
>DUS4_YEAST (Q06063) tRNA-dihydrouridine synthase 4 (EC 1.-.-.-)| Length = 367 Score = 29.6 bits (65), Expect = 3.6 Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 5/41 (12%) Frame = +3 Query: 96 KFLQKDAPYCSEFGTNCRGAMKKK-----GSAAVYFTAMAC 203 KF++ APYC G NC +K++ G A +Y + + C Sbjct: 110 KFVEMVAPYCDGIGINCGCPIKEQIREGIGCALIYNSDLLC 150
>MMOC_METCA (P22868) Methane monooxygenase component C (EC 1.14.13.25) (Methane| hydroxylase) (Methane monooxygenase reductase) (MMOR) Length = 348 Score = 29.3 bits (64), Expect = 4.7 Identities = 15/40 (37%), Positives = 21/40 (52%) Frame = -2 Query: 450 PSSDWRGGVGYISKDMVLKGLPGPGEDSLILVCGPPGMMN 331 PS DW G G D + + L + I +CGPPGM++ Sbjct: 283 PSGDWEGEQGS-PIDALREDLESSDANPDIYLCGPPGMID 321
>RELN_MOUSE (Q60841) Reelin precursor (EC 3.4.21.-) (Reeler protein)| Length = 3461 Score = 29.3 bits (64), Expect = 4.7 Identities = 30/113 (26%), Positives = 45/113 (39%), Gaps = 3/113 (2%) Frame = +3 Query: 99 FLQKDAPYCSEFGTNCRGAMKKKGSAAVYFTAMACQRPLRFRRSTKICIPSVTCTLNL*E 278 FL K+ + + C G ++ VY+T F T+I I Sbjct: 1333 FLLKEGCFPASAAKGCEGNSRELSEPTVYYTG-------DFEEWTRITIAI--------- 1376 Query: 279 GQ*PR-LVNNPLPYLQICDSSFQEDHKQE*ENPPLGLAN--LSKPCPLICSQH 428 PR L ++ + I +SS Q++ PP GL +S+PCP CS H Sbjct: 1377 ---PRSLASSKTRFRWIQESSSQKNV------PPFGLDGVYISEPCPSYCSGH 1420
>NIA_ASPNG (P36858) Nitrate reductase [NADPH] (EC 1.7.1.3) (NR)| Length = 867 Score = 29.3 bits (64), Expect = 4.7 Identities = 15/34 (44%), Positives = 20/34 (58%) Frame = -2 Query: 438 WRGGVGYISKDMVLKGLPGPGEDSLILVCGPPGM 337 W G G IS+D+ LK P S++L+CGP M Sbjct: 814 WTGRRGRISEDL-LKEHAIPDGKSMVLICGPEAM 846
>PUR4_SCHPO (O14228) Probable phosphoribosylformylglycinamidine synthase (EC| 6.3.5.3) (FGAM synthase) (FGAMS) (Formylglycinamide ribotide amidotransferase) (FGARAT) (Formylglycinamide ribotide synthetase) Length = 1323 Score = 28.9 bits (63), Expect = 6.2 Identities = 17/48 (35%), Positives = 23/48 (47%) Frame = -2 Query: 432 GGVGYISKDMVLKGLPGPGEDSLILVCGPPGMMNHISGDKAKDYSQGE 289 GG+G I K K PG S I+V G P ++ + G A + GE Sbjct: 421 GGIGRIRKQHAFKKSIAPG--SPIIVLGGPALLVGLGGGAASSMNAGE 466
>NIA2_BRANA (P39868) Nitrate reductase [NADH], clone PBNBR1412 (EC 1.7.1.1)| (NR) Length = 911 Score = 28.5 bits (62), Expect = 8.1 Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%) Frame = -2 Query: 438 WRGGVGYISKDMVLKGLP-GPGEDSLILVCGPPGMM 334 W G+I++ ++ + +P G +SL L CGPP M+ Sbjct: 854 WNYSTGFITEPVLREHVPEGLEGESLALACGPPPMI 889
>QUEF_RHIME (Q92N45) 7-cyano-7-deazaguanine reductase (EC 1.7.1.-)| Length = 154 Score = 28.5 bits (62), Expect = 8.1 Identities = 14/46 (30%), Positives = 20/46 (43%) Frame = -1 Query: 424 WLHIKGHGFERFARPRGGFSYSCLWSSWNDESHIWR*GKGLFTRRG 287 WL I + + PRGG W + N +W +G+ T RG Sbjct: 112 WLRIGAYWY-----PRGGIPIDVFWQTGNPPEGVWLPDQGVPTYRG 152 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 68,947,331 Number of Sequences: 219361 Number of extensions: 1483203 Number of successful extensions: 3840 Number of sequences better than 10.0: 48 Number of HSP's better than 10.0 without gapping: 3711 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3835 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2735358828 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
