ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags12d07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY104448.1| Zea mays PCO064487 mRNA sequence 222 8e-55
2ref|XM_550297.1| Oryza sativa (japonica cultivar-group), mRNA 184 2e-43
3dbj|AK104306.1| Oryza sativa (japonica cultivar-group) cDNA clon... 184 2e-43
4dbj|AK071324.1| Oryza sativa (japonica cultivar-group) cDNA clon... 184 2e-43
5dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 111 2e-21
6dbj|AP003215.3| Oryza sativa (japonica cultivar-group) genomic D... 111 2e-21
7gb|AF123281.1|AF123281 Pichia anomala nitrate assimilation gene ... 52 0.002
8gb|AC157983.16| Medicago truncatula clone mth2-130n5, complete s... 48 0.025
9ref|NM_122015.3| Arabidopsis thaliana cytochrome-b5 reductase/ o... 46 0.098
10emb|BX957322.7| Zebrafish DNA sequence from clone CH211-179J10 i... 46 0.098
11gb|AC144823.2| Danio rerio clone CH211-150P19, complete sequence 46 0.098
12gb|BT024720.1| Arabidopsis thaliana At5g20080 mRNA, complete cds 46 0.098
13emb|BX829612.1|CNS0A08D Arabidopsis thaliana Full-length cDNA Co... 46 0.098
14gb|AY087280.1| Arabidopsis thaliana clone 33544 mRNA, complete s... 46 0.098
15emb|AL935299.11| Zebrafish DNA sequence from clone DKEY-38M5, co... 44 0.39
16gb|AC102176.8| Mus musculus chromosome 15, clone RP23-480E14, co... 42 1.5
17gb|AY463018.1| Musa acuminata cytochrome b5 reductase mRNA, part... 42 1.5
18gb|AC117464.4| Homo sapiens 3 BAC RP11-412N9 (Roswell Park Cance... 42 1.5
19gb|AC115341.6| Rattus norvegicus 3 BAC CH230-248O1 (Children's H... 40 6.1
20gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 6.1
21gb|AC155230.2| Mus musculus BAC clone RP24-335J14 from chromosom... 40 6.1
22gb|AC134248.3| Mus musculus BAC clone RP23-338G21 from chromosom... 40 6.1
23emb|AL672152.8| Mouse DNA sequence from clone RP23-426A16 on chr... 40 6.1
24ref|XM_652336.1| Entamoeba histolytica HM-1:IMSS hypothetical pr... 40 6.1
25gb|AC019270.12| Homo sapiens chromosome 8, clone RP11-10C8, comp... 40 6.1
26gb|AC022844.8| Homo sapiens chromosome 8, clone RP11-250P18, com... 40 6.1
27emb|BX294434.12| Zebrafish DNA sequence from clone CH211-236H17 ... 40 6.1
28gb|AC158998.2| Mus musculus BAC clone RP24-290P19 from chromosom... 40 6.1
29dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
30gb|AC134240.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.1
31emb|AL929322.6| Zebrafish DNA sequence from clone DKEY-10H23, co... 40 6.1
32dbj|AK067333.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.1
33emb|CR942520.2| Xenopus tropicalis finished cDNA, clone TEgg084c14 40 6.1
34dbj|AP001689.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 6.1
35emb|AL954388.5| Mouse DNA sequence from clone RP23-395P6 on chro... 40 6.1
36dbj|AP000470.2| Homo sapiens genomic DNA, chromosome 21q21.1-q21... 40 6.1 
>gb|AY104448.1| Zea mays PCO064487 mRNA sequence
          Length = 1351

 Score =  222 bits (112), Expect = 8e-55
 Identities = 187/212 (88%)
 Strand = Plus / Minus

                                                                        
Query: 236  aatttgtataccatctgtgacgtgtaccctaaatctttgagaaggccagtgacctcgcct 295
            |||||||||||||||| ||  ||||| ||||| ||||| |||| ||||| || |||||| 
Sbjct: 1044 aatttgtataccatctctgcggtgtatcctaagtctttcagaacgccagagagctcgccc 985

                                                                        
Query: 296  tgtgaataatcctttgccttatctccagatatgtgattcatcattccaggaggaccacaa 355
            |||||   |||||| ||||| |||||||||||||||||||||||||| || |||||||||
Sbjct: 984  tgtgatctatccttggccttgtctccagatatgtgattcatcattcctggtggaccacaa 925

                                                                        
Query: 356  acaagaataagagaatcctcccctgggcctggcaaacctttcaaaaccatgtcctttgat 415
            |||||||| ||||| |||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 924  acaagaatcagagagtcctccgctgggcctggcaaacctttcaaaaccatgtcctttgat 865

                                            
Query: 416  atgtagccaacaccacccctccagtcacttga 447
            |   | ||||||||||||||||||||| ||||
Sbjct: 864  acaaaaccaacaccacccctccagtcagttga 833
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>ref|XM_550297.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1310

 Score =  184 bits (93), Expect = 2e-43
 Identities = 183/213 (85%)
 Strand = Plus / Minus

                                                                        
Query: 239  ttgtataccatctgtgacgtgtaccctaaatctttgagaaggccagtgacctcgccttgt 298
            ||||||||||||| ||  ||||| ||||| ||||| |||| ||| |||| |||||| || 
Sbjct: 1013 ttgtataccatctctgcagtgtatcctaactctttcagaatgccggtgagctcgccctgc 954

                                                                        
Query: 299  gaataatcctttgccttatctccagatatgtgattcatcattccaggaggaccacaaaca 358
            ||   |||||||||||| || || ||||| ||||||||||| || |||||||||||||||
Sbjct: 953  gatctatcctttgccttgtcaccggatatatgattcatcatacctggaggaccacaaaca 894

                                                                        
Query: 359  agaataagagaatcctcccctgggcctggcaaacctttcaaaaccatgtcctttgatatg 418
            || || ||||||||||||||||| | |||||||||||||||  | |||||||| ||||||
Sbjct: 893  aggatcagagaatcctcccctggccgtggcaaacctttcaaggcaatgtccttggatatg 834

                                             
Query: 419  tagccaacaccacccctccagtcacttgatggt 451
            |||||||||||||||||||| ||| ||||||||
Sbjct: 833  tagccaacaccacccctccaatcatttgatggt 801
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>dbj|AK104306.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-012-E03, full
            insert sequence
          Length = 1310

 Score =  184 bits (93), Expect = 2e-43
 Identities = 183/213 (85%)
 Strand = Plus / Minus

                                                                        
Query: 239  ttgtataccatctgtgacgtgtaccctaaatctttgagaaggccagtgacctcgccttgt 298
            ||||||||||||| ||  ||||| ||||| ||||| |||| ||| |||| |||||| || 
Sbjct: 1013 ttgtataccatctctgcagtgtatcctaactctttcagaatgccggtgagctcgccctgc 954

                                                                        
Query: 299  gaataatcctttgccttatctccagatatgtgattcatcattccaggaggaccacaaaca 358
            ||   |||||||||||| || || ||||| ||||||||||| || |||||||||||||||
Sbjct: 953  gatctatcctttgccttgtcaccggatatatgattcatcatacctggaggaccacaaaca 894

                                                                        
Query: 359  agaataagagaatcctcccctgggcctggcaaacctttcaaaaccatgtcctttgatatg 418
            || || ||||||||||||||||| | |||||||||||||||  | |||||||| ||||||
Sbjct: 893  aggatcagagaatcctcccctggccgtggcaaacctttcaaggcaatgtccttggatatg 834

                                             
Query: 419  tagccaacaccacccctccagtcacttgatggt 451
            |||||||||||||||||||| ||| ||||||||
Sbjct: 833  tagccaacaccacccctccaatcatttgatggt 801
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>dbj|AK071324.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023089J04, full
            insert sequence
          Length = 1402

 Score =  184 bits (93), Expect = 2e-43
 Identities = 183/213 (85%)
 Strand = Plus / Minus

                                                                        
Query: 239  ttgtataccatctgtgacgtgtaccctaaatctttgagaaggccagtgacctcgccttgt 298
            ||||||||||||| ||  ||||| ||||| ||||| |||| ||| |||| |||||| || 
Sbjct: 1093 ttgtataccatctctgcagtgtatcctaactctttcagaatgccggtgagctcgccctgc 1034

                                                                        
Query: 299  gaataatcctttgccttatctccagatatgtgattcatcattccaggaggaccacaaaca 358
            ||   |||||||||||| || || ||||| ||||||||||| || |||||||||||||||
Sbjct: 1033 gatctatcctttgccttgtcaccggatatatgattcatcatacctggaggaccacaaaca 974

                                                                        
Query: 359  agaataagagaatcctcccctgggcctggcaaacctttcaaaaccatgtcctttgatatg 418
            || || ||||||||||||||||| | |||||||||||||||  | |||||||| ||||||
Sbjct: 973  aggatcagagaatcctcccctggccgtggcaaacctttcaaggcaatgtccttggatatg 914

                                             
Query: 419  tagccaacaccacccctccagtcacttgatggt 451
            |||||||||||||||||||| ||| ||||||||
Sbjct: 913  tagccaacaccacccctccaatcatttgatggt 881
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  111 bits (56), Expect = 2e-21
 Identities = 86/96 (89%)
 Strand = Plus / Plus

                                                                           
Query: 356     acaagaataagagaatcctcccctgggcctggcaaacctttcaaaaccatgtcctttgat 415
               ||||| || ||||||||||||||||| | |||||||||||||||  | |||||||| |||
Sbjct: 3820125 acaaggatcagagaatcctcccctggccgtggcaaacctttcaaggcaatgtccttggat 3820184

                                                   
Query: 416     atgtagccaacaccacccctccagtcacttgatggt 451
               ||||||||||||||||||||||| ||| ||||||||
Sbjct: 3820185 atgtagccaacaccacccctccaatcatttgatggt 3820220



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 48/54 (88%)
 Strand = Plus / Plus

                                                                     
Query: 304     atcctttgccttatctccagatatgtgattcatcattccaggaggaccacaaac 357
               |||||||||||| || || ||||| ||||||||||| || ||||||||||||||
Sbjct: 3819882 atcctttgccttgtcaccggatatatgattcatcatacctggaggaccacaaac 3819935
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>dbj|AP003215.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBa0089K24
          Length = 154137

 Score =  111 bits (56), Expect = 2e-21
 Identities = 86/96 (89%)
 Strand = Plus / Plus

                                                                         
Query: 356   acaagaataagagaatcctcccctgggcctggcaaacctttcaaaaccatgtcctttgat 415
             ||||| || ||||||||||||||||| | |||||||||||||||  | |||||||| |||
Sbjct: 93667 acaaggatcagagaatcctcccctggccgtggcaaacctttcaaggcaatgtccttggat 93726

                                                 
Query: 416   atgtagccaacaccacccctccagtcacttgatggt 451
             ||||||||||||||||||||||| ||| ||||||||
Sbjct: 93727 atgtagccaacaccacccctccaatcatttgatggt 93762



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 48/54 (88%)
 Strand = Plus / Plus

                                                                   
Query: 304   atcctttgccttatctccagatatgtgattcatcattccaggaggaccacaaac 357
             |||||||||||| || || ||||| ||||||||||| || ||||||||||||||
Sbjct: 93424 atcctttgccttgtcaccggatatatgattcatcatacctggaggaccacaaac 93477
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>gb|AF123281.1|AF123281 Pichia anomala nitrate assimilation gene cluster, complete sequence
          Length = 7580

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                      
Query: 337  cattccaggaggaccacaaacaagaa 362
            ||||||||||||||||||||||||||
Sbjct: 3004 cattccaggaggaccacaaacaagaa 2979
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>gb|AC157983.16| Medicago truncatula clone mth2-130n5, complete sequence
          Length = 114996

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 45/52 (86%)
 Strand = Plus / Minus

                                                                 
Query: 303   aatcctttgccttatctccagatatgtgattcatcattccaggaggaccaca 354
             ||||||| ||||| || |||||||| || | |||||||||||| ||||||||
Sbjct: 54757 aatccttggccttttcaccagatatatgttgcatcattccagggggaccaca 54706
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>ref|NM_122015.3| Arabidopsis thaliana cytochrome-b5 reductase/ oxidoreductase
            AT5G20080 mRNA, complete cds
          Length = 1426

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                               
Query: 318  ctccagatatgtgattcatcattccaggaggaccacaaacaagaataagag 368
            |||||||||| || | |||||| ||||||||||| || ||||| |||||||
Sbjct: 1043 ctccagatatatgctccatcatcccaggaggaccgcatacaaggataagag 993
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>emb|BX957322.7| Zebrafish DNA sequence from clone CH211-179J10 in linkage group 10,
             complete sequence
          Length = 138899

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 121   actgctctgagtttggcactaat 143
             |||||||||||||||||||||||
Sbjct: 62968 actgctctgagtttggcactaat 62990
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>gb|AC144823.2| Danio rerio clone CH211-150P19, complete sequence
          Length = 159419

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 121   actgctctgagtttggcactaat 143
             |||||||||||||||||||||||
Sbjct: 44598 actgctctgagtttggcactaat 44620
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>gb|BT024720.1| Arabidopsis thaliana At5g20080 mRNA, complete cds
          Length = 987

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                              
Query: 318 ctccagatatgtgattcatcattccaggaggaccacaaacaagaataagag 368
           |||||||||| || | |||||| ||||||||||| || ||||| |||||||
Sbjct: 901 ctccagatatatgctccatcatcccaggaggaccgcatacaaggataagag 851
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>emb|BX829612.1|CNS0A08D Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB24ZH04 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1294

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                              
Query: 318 ctccagatatgtgattcatcattccaggaggaccacaaacaagaataagag 368
           |||||||||| || | |||||| ||||||||||| || ||||| |||||||
Sbjct: 911 ctccagatatatgctccatcatcccaggaggaccgcatacaaggataagag 861
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>gb|AY087280.1| Arabidopsis thaliana clone 33544 mRNA, complete sequence
          Length = 1287

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                              
Query: 318 ctccagatatgtgattcatcattccaggaggaccacaaacaagaataagag 368
           |||||||||| || | |||||| ||||||||||| || ||||| |||||||
Sbjct: 933 ctccagatatatgctccatcatcccaggaggaccgcatacaaggataagag 883
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>emb|AL935299.11| Zebrafish DNA sequence from clone DKEY-38M5, complete sequence
          Length = 229574

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 415   tatgtagccaacaccacccctc 436
             ||||||||||||||||||||||
Sbjct: 27777 tatgtagccaacaccacccctc 27798
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>gb|AC102176.8| Mus musculus chromosome 15, clone RP23-480E14, complete sequence
          Length = 181577

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 344   ggaggaccacaaacaagaataagag 368
             |||||| ||||||||||||||||||
Sbjct: 39091 ggaggaacacaaacaagaataagag 39115
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>gb|AY463018.1| Musa acuminata cytochrome b5 reductase mRNA, partial cds
          Length = 571

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 392 cctttcaaaaccatgtcctttgata 416
           ||||| |||||||||||||||||||
Sbjct: 373 ccttttaaaaccatgtcctttgata 349
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>gb|AC117464.4| Homo sapiens 3 BAC RP11-412N9 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 154728

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 39    ggttattcaggtgtccatgca 59
             |||||||||||||||||||||
Sbjct: 15054 ggttattcaggtgtccatgca 15034
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>gb|AC115341.6| Rattus norvegicus 3 BAC CH230-248O1 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 237425

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 426   caccacccctccagtcactt 445
             ||||||||||||||||||||
Sbjct: 33895 caccacccctccagtcactt 33914
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 78      caaaacggaaccgaaccaaa 97
               ||||||||||||||||||||
Sbjct: 7977707 caaaacggaaccgaaccaaa 7977688
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>gb|AC155230.2| Mus musculus BAC clone RP24-335J14 from chromosome 12, complete
             sequence
          Length = 135049

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 388   caaacctttcaaaaccatgtcctt 411
             ||||||||||||||||||| ||||
Sbjct: 71028 caaacctttcaaaaccatgccctt 71051
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>gb|AC134248.3| Mus musculus BAC clone RP23-338G21 from chromosome 9, complete sequence
          Length = 206805

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 2      cccggttaaaacaacaccagcaac 25
              |||||||||||||||| |||||||
Sbjct: 106080 cccggttaaaacaacagcagcaac 106057
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>emb|AL672152.8| Mouse DNA sequence from clone RP23-426A16 on chromosome X, complete
             sequence
          Length = 200643

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 396   tcaaaaccatgtcctttgat 415
             ||||||||||||||||||||
Sbjct: 58386 tcaaaaccatgtcctttgat 58367
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>ref|XM_652336.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (2.t00025)
           partial mRNA
          Length = 1488

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 343 aggaggaccacaaacaagaataag 366
           |||||||||| |||||||||||||
Sbjct: 933 aggaggaccaaaaacaagaataag 910
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>gb|AC019270.12| Homo sapiens chromosome 8, clone RP11-10C8, complete sequence
          Length = 154957

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 388   caaacctttcaaaaccatgt 407
             ||||||||||||||||||||
Sbjct: 69936 caaacctttcaaaaccatgt 69955
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>gb|AC022844.8| Homo sapiens chromosome 8, clone RP11-250P18, complete sequence
          Length = 171732

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 388    caaacctttcaaaaccatgt 407
              ||||||||||||||||||||
Sbjct: 170290 caaacctttcaaaaccatgt 170271
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>emb|BX294434.12| Zebrafish DNA sequence from clone CH211-236H17 in linkage group 23,
             complete sequence
          Length = 172764

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 384   ctggcaaacctttcaaaacc 403
             ||||||||||||||||||||
Sbjct: 70993 ctggcaaacctttcaaaacc 71012
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>gb|AC158998.2| Mus musculus BAC clone RP24-290P19 from chromosome 9, complete sequence
          Length = 173036

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 95    aaaattcttacaaaaagatg 114
             ||||||||||||||||||||
Sbjct: 96889 aaaattcttacaaaaagatg 96908
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 78      caaaacggaaccgaaccaaa 97
               ||||||||||||||||||||
Sbjct: 7975542 caaaacggaaccgaaccaaa 7975523
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>gb|AC134240.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBb0081I10, complete sequence
          Length = 143298

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 78    caaaacggaaccgaaccaaa 97
             ||||||||||||||||||||
Sbjct: 45070 caaaacggaaccgaaccaaa 45051
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>emb|AL929322.6| Zebrafish DNA sequence from clone DKEY-10H23, complete sequence
          Length = 220527

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 392    cctttcaaaaccatgtcctttgat 415
              |||||||||||||| |||||||||
Sbjct: 169469 cctttcaaaaccatatcctttgat 169492
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>dbj|AK067333.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013104O03, full
            insert sequence
          Length = 3359

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 78   caaaacggaaccgaaccaaa 97
            ||||||||||||||||||||
Sbjct: 1467 caaaacggaaccgaaccaaa 1486
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>emb|CR942520.2| Xenopus tropicalis finished cDNA, clone TEgg084c14
          Length = 4480

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 354  aaacaagaataagagaatcc 373
            ||||||||||||||||||||
Sbjct: 1601 aaacaagaataagagaatcc 1582
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>dbj|AP001689.1| Homo sapiens genomic DNA, chromosome 21q, section 33/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 389    aaacctttcaaaaccatgtc 408
              ||||||||||||||||||||
Sbjct: 202759 aaacctttcaaaaccatgtc 202740
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>emb|AL954388.5| Mouse DNA sequence from clone RP23-395P6 on chromosome 2, complete
              sequence
          Length = 131825

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 426    caccacccctccagtcactt 445
              ||||||||||||||||||||
Sbjct: 117246 caccacccctccagtcactt 117265
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>dbj|AP000470.2| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2 clone:B15H23,
             LL56-APP region, complete sequence
          Length = 151675

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 389   aaacctttcaaaaccatgtc 408
             ||||||||||||||||||||
Sbjct: 36919 aaacctttcaaaaccatgtc 36900


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,873,730
Number of Sequences: 3902068
Number of extensions: 3873730
Number of successful extensions: 69172
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 69070
Number of HSP's gapped (non-prelim): 102
length of query: 451
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 429
effective length of database: 17,147,199,772
effective search space: 7356148702188
effective search space used: 7356148702188
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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