ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbags12d02 |
|---|---|
| Clone Library Name | barley_pub |
>TIP1_MOUSE (Q9CR47) TGF-beta-inducible nuclear protein 1 (L-name-related| protein 42) (LNR42) Length = 260 Score = 180 bits (456), Expect(2) = 1e-47 Identities = 84/101 (83%), Positives = 92/101 (91%) Frame = -3 Query: 519 FTRKPPKYERFIRPTGLRFTKAHVTHPELKCTFNLDIISVKKNPNGPMYTSLGVMTRGTI 340 FTRKPPKYERFIRP GLRF KAHVTHPELK TF L I+ VKKNP+ P+YT+LGV+T+GT+ Sbjct: 160 FTRKPPKYERFIRPMGLRFKKAHVTHPELKATFCLPILGVKKNPSSPLYTTLGVITKGTV 219 Query: 339 IEVNVSELGLVTPAGKVVWGKYAQVTNNPENDGCINAVLLV 217 IEVNVSELGLVT GKV+WGKYAQVTNNPENDGCINAVLLV Sbjct: 220 IEVNVSELGLVTQGGKVIWGKYAQVTNNPENDGCINAVLLV 260 Score = 29.6 bits (65), Expect(2) = 1e-47 Identities = 14/25 (56%), Positives = 16/25 (64%) Frame = -2 Query: 574 KTKQXKRMVTKATFVGPGFYKEATK 500 K K KRMVTK FVG GF ++ K Sbjct: 142 KKKAWKRMVTKVCFVGDGFTRKPPK 166
>TIP1_HUMAN (O95478) TGF-beta-inducible nuclear protein 1 (Hairy cell leukemia| protein 1) Length = 260 Score = 180 bits (456), Expect(2) = 1e-47 Identities = 84/101 (83%), Positives = 92/101 (91%) Frame = -3 Query: 519 FTRKPPKYERFIRPTGLRFTKAHVTHPELKCTFNLDIISVKKNPNGPMYTSLGVMTRGTI 340 FTRKPPKYERFIRP GLRF KAHVTHPELK TF L I+ VKKNP+ P+YT+LGV+T+GT+ Sbjct: 160 FTRKPPKYERFIRPMGLRFKKAHVTHPELKATFCLPILGVKKNPSSPLYTTLGVITKGTV 219 Query: 339 IEVNVSELGLVTPAGKVVWGKYAQVTNNPENDGCINAVLLV 217 IEVNVSELGLVT GKV+WGKYAQVTNNPENDGCINAVLLV Sbjct: 220 IEVNVSELGLVTQGGKVIWGKYAQVTNNPENDGCINAVLLV 260 Score = 29.6 bits (65), Expect(2) = 1e-47 Identities = 14/25 (56%), Positives = 16/25 (64%) Frame = -2 Query: 574 KTKQXKRMVTKATFVGPGFYKEATK 500 K K KRMVTK FVG GF ++ K Sbjct: 142 KKKAWKRMVTKVCFVGDGFTRKPPK 166
>TIP1_BOVIN (Q3SX11) TGF-beta-inducible nuclear protein 1| Length = 260 Score = 180 bits (456), Expect(2) = 1e-47 Identities = 84/101 (83%), Positives = 92/101 (91%) Frame = -3 Query: 519 FTRKPPKYERFIRPTGLRFTKAHVTHPELKCTFNLDIISVKKNPNGPMYTSLGVMTRGTI 340 FTRKPPKYERFIRP GLRF KAHVTHPELK TF L I+ VKKNP+ P+YT+LGV+T+GT+ Sbjct: 160 FTRKPPKYERFIRPMGLRFKKAHVTHPELKATFCLPILGVKKNPSSPLYTTLGVITKGTV 219 Query: 339 IEVNVSELGLVTPAGKVVWGKYAQVTNNPENDGCINAVLLV 217 IEVNVSELGLVT GKV+WGKYAQVTNNPENDGCINAVLLV Sbjct: 220 IEVNVSELGLVTQGGKVIWGKYAQVTNNPENDGCINAVLLV 260 Score = 29.6 bits (65), Expect(2) = 1e-47 Identities = 14/25 (56%), Positives = 16/25 (64%) Frame = -2 Query: 574 KTKQXKRMVTKATFVGPGFYKEATK 500 K K KRMVTK FVG GF ++ K Sbjct: 142 KKKAWKRMVTKVCFVGDGFTRKPPK 166
>TIP1_RAT (Q9QYU7) TGF-beta-inducible nuclear protein 1 (Protein CDK105)| Length = 260 Score = 179 bits (453), Expect(2) = 6e-47 Identities = 83/101 (82%), Positives = 92/101 (91%) Frame = -3 Query: 519 FTRKPPKYERFIRPTGLRFTKAHVTHPELKCTFNLDIISVKKNPNGPMYTSLGVMTRGTI 340 FTRKPPKYE+FIRP GLRF KAHVTHPELK TF L I+ VKKNP+ P+YT+LGV+T+GT+ Sbjct: 160 FTRKPPKYEKFIRPMGLRFKKAHVTHPELKATFCLPILGVKKNPSSPLYTTLGVITKGTV 219 Query: 339 IEVNVSELGLVTPAGKVVWGKYAQVTNNPENDGCINAVLLV 217 IEVNVSELGLVT GKV+WGKYAQVTNNPENDGCINAVLLV Sbjct: 220 IEVNVSELGLVTQGGKVIWGKYAQVTNNPENDGCINAVLLV 260 Score = 28.5 bits (62), Expect(2) = 6e-47 Identities = 13/25 (52%), Positives = 16/25 (64%) Frame = -2 Query: 574 KTKQXKRMVTKATFVGPGFYKEATK 500 K K +RMVTK FVG GF ++ K Sbjct: 142 KKKAWRRMVTKVCFVGDGFTRKPPK 166
>YEV6_YEAST (P40078) Hypothetical 29.7 kDa protein in RSP5-LCP5 intergenic| region Length = 261 Score = 151 bits (382), Expect(2) = 8e-40 Identities = 73/101 (72%), Positives = 83/101 (82%) Frame = -3 Query: 519 FTRKPPKYERFIRPTGLRFTKAHVTHPELKCTFNLDIISVKKNPNGPMYTSLGVMTRGTI 340 FTR+P K ER IRP+ LR KA+VTHPEL T L I++VKKNP PMYT LGV+T+GTI Sbjct: 161 FTRRPVKMERIIRPSALRQKKANVTHPELGVTVFLPILAVKKNPQSPMYTQLGVLTKGTI 220 Query: 339 IEVNVSELGLVTPAGKVVWGKYAQVTNNPENDGCINAVLLV 217 IEVNVSELG+VT GKVVWGKYAQVTN P+ DGC+NAVLLV Sbjct: 221 IEVNVSELGMVTAGGKVVWGKYAQVTNEPDRDGCVNAVLLV 261 Score = 32.0 bits (71), Expect(2) = 8e-40 Identities = 13/28 (46%), Positives = 19/28 (67%) Frame = -2 Query: 580 RGKTKQXKRMVTKATFVGPGFYKEATKV 497 + ++K KRM+TK TFVG GF + K+ Sbjct: 141 KSRSKSWKRMITKHTFVGEGFTRRPVKM 168
>RS8E_PICTO (Q6L0D3) 30S ribosomal protein S8e| Length = 125 Score = 47.0 bits (110), Expect = 4e-05 Identities = 29/84 (34%), Positives = 42/84 (50%) Frame = -3 Query: 471 LRFTKAHVTHPELKCTFNLDIISVKKNPNGPMYTSLGVMTRGTIIEVNVSELGLVTPAGK 292 LR A+V +P+ K T + I +VK+N P Y +M RGT+I + + Sbjct: 57 LRCDYANVYNPKDKTTRKVKINTVKENSADPHYVQRNIMNRGTVISTELGD--------- 107 Query: 291 VVWGKYAQVTNNPENDGCINAVLL 220 A++T+ P DG INAVLL Sbjct: 108 ------ARITSRPGQDGVINAVLL 125
>RS8E_SULAC (Q4JAP5) 30S ribosomal protein S8e| Length = 128 Score = 42.0 bits (97), Expect = 0.001 Identities = 28/79 (35%), Positives = 42/79 (53%) Frame = -3 Query: 456 AHVTHPELKCTFNLDIISVKKNPNGPMYTSLGVMTRGTIIEVNVSELGLVTPAGKVVWGK 277 A+V P+ K + IISV ++P Y G++ +GT+I+ +ELG Sbjct: 63 ANVYDPQSKTAKKVKIISVLESPANREYARRGIIVKGTLIQ---TELG------------ 107 Query: 276 YAQVTNNPENDGCINAVLL 220 A+VT+ P DG INA+LL Sbjct: 108 KAKVTSRPGQDGIINALLL 126
>RS8E_METKA (Q8TV55) 30S ribosomal protein S8e| Length = 133 Score = 41.2 bits (95), Expect = 0.002 Identities = 32/86 (37%), Positives = 43/86 (50%), Gaps = 1/86 (1%) Frame = -3 Query: 474 GLRF-TKAHVTHPELKCTFNLDIISVKKNPNGPMYTSLGVMTRGTIIEVNVSELGLVTPA 298 GL+F T A+V PE + I V KNP Y GV+T+G II +E+GL Sbjct: 56 GLKFATHANVADPETGEVKCVRIEEVVKNPASQYYERHGVITKGAIIR---TEIGL---- 108 Query: 297 GKVVWGKYAQVTNNPENDGCINAVLL 220 A+VTN P + +NAVL+ Sbjct: 109 --------AKVTNRPGQEPVVNAVLI 126
>RS8E_METJA (P54055) 30S ribosomal protein S8e| Length = 129 Score = 40.8 bits (94), Expect = 0.003 Identities = 27/79 (34%), Positives = 41/79 (51%) Frame = -3 Query: 456 AHVTHPELKCTFNLDIISVKKNPNGPMYTSLGVMTRGTIIEVNVSELGLVTPAGKVVWGK 277 A+V PE + II+V++N Y V+T+G IIE +E+GL Sbjct: 64 ANVLDPETGTCKKVKIITVRENKANIHYVRRNVITKGAIIE---TEIGL----------- 109 Query: 276 YAQVTNNPENDGCINAVLL 220 A+VT+ P DG +NA+L+ Sbjct: 110 -AKVTSRPGQDGTVNAILI 127
>RS8E_SULTO (Q976K3) 30S ribosomal protein S8e| Length = 128 Score = 39.7 bits (91), Expect = 0.006 Identities = 26/81 (32%), Positives = 41/81 (50%) Frame = -3 Query: 462 TKAHVTHPELKCTFNLDIISVKKNPNGPMYTSLGVMTRGTIIEVNVSELGLVTPAGKVVW 283 T A++ P+ K + I+SV + P Y G++ +G+II+ T GK Sbjct: 61 TFANIYDPQEKVSKKAKILSVIETPANKEYARRGIIVKGSIIQ---------TELGK--- 108 Query: 282 GKYAQVTNNPENDGCINAVLL 220 A+VT+ P DG INA+L+ Sbjct: 109 ---AKVTSRPGQDGTINAILI 126
>RS8E_ARCFU (O28130) 30S ribosomal protein S8e| Length = 125 Score = 38.1 bits (87), Expect = 0.019 Identities = 24/79 (30%), Positives = 38/79 (48%) Frame = -3 Query: 456 AHVTHPELKCTFNLDIISVKKNPNGPMYTSLGVMTRGTIIEVNVSELGLVTPAGKVVWGK 277 A+V P+ ++I SV +NP Y V+T+G II ++ + Sbjct: 61 ANVYDPKQGKVVRVEIESVVENPAHVHYARRNVITKGAIIATSIGK-------------- 106 Query: 276 YAQVTNNPENDGCINAVLL 220 A+VTN P +G +NAVL+ Sbjct: 107 -ARVTNRPSQEGVVNAVLI 124
>RS8E_THEVO (Q97BA2) 30S ribosomal protein S8e| Length = 127 Score = 37.7 bits (86), Expect = 0.024 Identities = 23/64 (35%), Positives = 30/64 (46%) Frame = -3 Query: 411 IISVKKNPNGPMYTSLGVMTRGTIIEVNVSELGLVTPAGKVVWGKYAQVTNNPENDGCIN 232 II+VK+NP Y ++ +GTII + E A VT+ P DG IN Sbjct: 78 IITVKENPANSHYVQRNIINKGTIISTEIGE---------------AIVTSRPGQDGVIN 122 Query: 231 AVLL 220 A LL Sbjct: 123 AKLL 126
>RS8E_METMA (Q8PVC6) 30S ribosomal protein S8e| Length = 125 Score = 36.6 bits (83), Expect = 0.055 Identities = 26/84 (30%), Positives = 40/84 (47%) Frame = -3 Query: 471 LRFTKAHVTHPELKCTFNLDIISVKKNPNGPMYTSLGVMTRGTIIEVNVSELGLVTPAGK 292 L+ A++T+P+ T I +V N Y ++T+G++I TP G Sbjct: 56 LQSNVANITNPKDGKTVTATIETVIDNTANKHYVRRNILTKGSVIR---------TPVGT 106 Query: 291 VVWGKYAQVTNNPENDGCINAVLL 220 A+VT+ P DG INAVL+ Sbjct: 107 ------ARVTSRPGQDGVINAVLI 124
>RS8E_PYRHO (O58830) 30S ribosomal protein S8e| Length = 127 Score = 36.2 bits (82), Expect = 0.071 Identities = 20/64 (31%), Positives = 31/64 (48%) Frame = -3 Query: 411 IISVKKNPNGPMYTSLGVMTRGTIIEVNVSELGLVTPAGKVVWGKYAQVTNNPENDGCIN 232 II V +NP + ++T+G IIE + + A+VT+ P DG +N Sbjct: 77 IIRVLENPANRQFARRNIITKGAIIETEIGK---------------AKVTSRPGQDGVVN 121 Query: 231 AVLL 220 A+LL Sbjct: 122 AILL 125
>RS8E_PYRKO (Q5JGF3) 30S ribosomal protein S8e| Length = 130 Score = 36.2 bits (82), Expect = 0.071 Identities = 22/64 (34%), Positives = 32/64 (50%) Frame = -3 Query: 411 IISVKKNPNGPMYTSLGVMTRGTIIEVNVSELGLVTPAGKVVWGKYAQVTNNPENDGCIN 232 I++V +NP Y ++T+G IIE T GK + VT+ P DG +N Sbjct: 77 ILNVVENPANRQYARRNIITKGAIIE---------TEIGKAI------VTSRPGQDGVVN 121 Query: 231 AVLL 220 AVL+ Sbjct: 122 AVLI 125
>RS8E_PYRFU (Q8U1Y5) 30S ribosomal protein S8e| Length = 127 Score = 35.8 bits (81), Expect = 0.093 Identities = 20/64 (31%), Positives = 31/64 (48%) Frame = -3 Query: 411 IISVKKNPNGPMYTSLGVMTRGTIIEVNVSELGLVTPAGKVVWGKYAQVTNNPENDGCIN 232 II V +NP + ++T+G IIE + + A+VT+ P DG +N Sbjct: 77 IIRVIENPANRQFARRNIITKGAIIETEIGK---------------AKVTSRPGQDGVVN 121 Query: 231 AVLL 220 A+LL Sbjct: 122 AILL 125
>RS8E_PYRAB (Q9UZL4) 30S ribosomal protein S8e| Length = 127 Score = 35.8 bits (81), Expect = 0.093 Identities = 20/64 (31%), Positives = 31/64 (48%) Frame = -3 Query: 411 IISVKKNPNGPMYTSLGVMTRGTIIEVNVSELGLVTPAGKVVWGKYAQVTNNPENDGCIN 232 II V +NP + ++T+G IIE + + A+VT+ P DG +N Sbjct: 77 IIRVIENPANRQFARRNIITKGAIIETEIGK---------------AKVTSRPGQDGVVN 121 Query: 231 AVLL 220 A+LL Sbjct: 122 AILL 125
>RS8E_THEAC (Q9HJD0) 30S ribosomal protein S8e| Length = 127 Score = 35.4 bits (80), Expect = 0.12 Identities = 21/64 (32%), Positives = 29/64 (45%) Frame = -3 Query: 411 IISVKKNPNGPMYTSLGVMTRGTIIEVNVSELGLVTPAGKVVWGKYAQVTNNPENDGCIN 232 II+VK NP Y ++ +GT+I + + A VT+ P DG IN Sbjct: 78 IITVKANPANSHYVQRNIINKGTVIATEIGD---------------AVVTSRPGQDGVIN 122 Query: 231 AVLL 220 A LL Sbjct: 123 AKLL 126
>RS8E_NANEQ (P61301) 30S ribosomal protein S8e| Length = 127 Score = 35.4 bits (80), Expect = 0.12 Identities = 22/78 (28%), Positives = 37/78 (47%) Frame = -3 Query: 453 HVTHPELKCTFNLDIISVKKNPNGPMYTSLGVMTRGTIIEVNVSELGLVTPAGKVVWGKY 274 +V P T I+ NP+ + +G++T+G I+E +ELG V Sbjct: 64 NVYDPTQGKTVKAKIVRFLDNPSNRNFARMGILTKGAIVE---TELGKV----------- 109 Query: 273 AQVTNNPENDGCINAVLL 220 ++T+ P DG +N VL+ Sbjct: 110 -KITSRPGQDGVLNGVLI 126
>RS8E_METAC (Q8TS82) 30S ribosomal protein S8e| Length = 125 Score = 34.7 bits (78), Expect = 0.21 Identities = 23/84 (27%), Positives = 39/84 (46%) Frame = -3 Query: 471 LRFTKAHVTHPELKCTFNLDIISVKKNPNGPMYTSLGVMTRGTIIEVNVSELGLVTPAGK 292 L+ A+VT+P+ T I +V N Y ++T+G++I ++ Sbjct: 56 LQSNVANVTNPKDGKTVTAPIETVIDNTANKHYVRRNILTKGSVIRTSMGT--------- 106 Query: 291 VVWGKYAQVTNNPENDGCINAVLL 220 A+VT+ P DG +NAVL+ Sbjct: 107 ------ARVTSRPGQDGVVNAVLI 124
>RS8E_HALMA (P49402) 30S ribosomal protein S8e (HS23)| Length = 123 Score = 34.7 bits (78), Expect = 0.21 Identities = 20/69 (28%), Positives = 33/69 (47%) Frame = -3 Query: 426 TFNLDIISVKKNPNGPMYTSLGVMTRGTIIEVNVSELGLVTPAGKVVWGKYAQVTNNPEN 247 T I +V +NP+ P Y ++T+G I+E + + A+VT+ P Sbjct: 69 TIEATIENVVENPSNPNYARRNIITKGAILETSEGQ---------------ARVTSRPGQ 113 Query: 246 DGCINAVLL 220 G +NAVL+ Sbjct: 114 HGQVNAVLV 122
>RS8E_PYRAE (Q8ZTB8) 30S ribosomal protein S8e| Length = 131 Score = 33.9 bits (76), Expect = 0.35 Identities = 22/79 (27%), Positives = 36/79 (45%) Frame = -3 Query: 456 AHVTHPELKCTFNLDIISVKKNPNGPMYTSLGVMTRGTIIEVNVSELGLVTPAGKVVWGK 277 A+V P+ + + IIS+ P P + + +G++I+ V + Sbjct: 67 ANVYIPKERKSVKAKIISIISTPANPDFARRNFIVKGSVIQTEVGK-------------- 112 Query: 276 YAQVTNNPENDGCINAVLL 220 A VT+ P DG INAVL+ Sbjct: 113 -ALVTSRPGQDGVINAVLI 130
>RS8E_METMP (P61300) 30S ribosomal protein S8e| Length = 128 Score = 32.7 bits (73), Expect = 0.79 Identities = 23/64 (35%), Positives = 30/64 (46%) Frame = -3 Query: 411 IISVKKNPNGPMYTSLGVMTRGTIIEVNVSELGLVTPAGKVVWGKYAQVTNNPENDGCIN 232 + +V N Y VMT+G IIE T GK A+VT+ P DG +N Sbjct: 78 VTNVIDNKANKHYIRRNVMTKGAIIE---------TEMGK------AKVTSRPGQDGVVN 122 Query: 231 AVLL 220 A+LL Sbjct: 123 AILL 126
>PER_DROPS (P12348) Period circadian protein| Length = 1241 Score = 32.7 bits (73), Expect = 0.79 Identities = 27/79 (34%), Positives = 36/79 (45%), Gaps = 3/79 (3%) Frame = +2 Query: 107 GSIPKTSMNCNTDKIALVRPDTNSALIPSTRIVSKLHTSKTALIQPSFSG---LFVT*AY 277 G+ PK N+ + P+ A IP V HT+ TA+ Q SFS LF T Y Sbjct: 940 GNKPKQQPTLNSVGVGTGAPE---APIPP---VHPTHTTHTAIAQSSFSAQQSLFPTFYY 993 Query: 278 LPQTTFPAGVTRPSSLTFT 334 +P T A P +L+ T Sbjct: 994 IPATPLAASTPAPGALSPT 1012
>RS8E_SULSO (Q980W3) 30S ribosomal protein S8e| Length = 133 Score = 32.0 bits (71), Expect = 1.3 Identities = 25/81 (30%), Positives = 34/81 (41%) Frame = -3 Query: 462 TKAHVTHPELKCTFNLDIISVKKNPNGPMYTSLGVMTRGTIIEVNVSELGLVTPAGKVVW 283 T A+V P + I+ + + P G++ RG I +E GL Sbjct: 61 TTANVLDPATNTAKKVKILEILETPANKELARRGIIIRGAKIR---TEAGL--------- 108 Query: 282 GKYAQVTNNPENDGCINAVLL 220 A VT+ P DG INAVLL Sbjct: 109 ---AVVTSRPGQDGVINAVLL 126
>PER_DROME (P07663) Period circadian protein (Clock-6 protein) (CLK-6)| Length = 1224 Score = 31.6 bits (70), Expect = 1.8 Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 2/43 (4%) Frame = +2 Query: 191 STRIVSKLHTSKTALIQPSFS--GLFVT*AYLPQTTFPAGVTR 313 S I +H++ TA+ Q SFS GLF T Y+P + P TR Sbjct: 942 SVGITPPVHSTHTAMAQSSFSSAGLFPTFYYIPASLTPTSPTR 984
>PER_DROYA (Q24767) Period circadian protein| Length = 1208 Score = 31.6 bits (70), Expect = 1.8 Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 2/43 (4%) Frame = +2 Query: 191 STRIVSKLHTSKTALIQPSFS--GLFVT*AYLPQTTFPAGVTR 313 S I +H++ TA+ Q SFS GLF T Y+P + P TR Sbjct: 923 SVGITPPVHSTHTAMAQSSFSSAGLFPTFYYIPASLTPTSPTR 965
>TOP2_ASFB7 (Q00942) DNA topoisomerase 2 (EC 5.99.1.3) (DNA topoisomerase II)| Length = 1192 Score = 30.8 bits (68), Expect = 3.0 Identities = 15/59 (25%), Positives = 31/59 (52%), Gaps = 1/59 (1%) Frame = -3 Query: 399 KKNPNGPMYTSLGVMTRGTIIEVNVSEL-GLVTPAGKVVWGKYAQVTNNPENDGCINAV 226 K NP+GP + G+++ G +I ++ + T +G+ + + Q+TNN G + + Sbjct: 454 KSNPSGPSFDFCGMISLGGVIMNACKKVTNITTDSGETIMVRNEQLTNNKVLQGIVQVL 512
>RMT2_CANGA (Q6FMP0) Arginine N-methyltransferase 2 (EC 2.1.1.-)| Length = 412 Score = 30.8 bits (68), Expect = 3.0 Identities = 17/54 (31%), Positives = 33/54 (61%), Gaps = 2/54 (3%) Frame = +2 Query: 83 QLDITLESGS--IPKTSMNCNTDKIALVRPDTNSALIPSTRIVSKLHTSKTALI 238 ++DI E+ + +PK +++ +T K++ V D +A P T + +KL ++ ALI Sbjct: 157 EIDICAEASAEVVPKDALDDSTGKVSSVSDDDATAADPDTYLNTKLKYTEDALI 210
>TOP2_ASFM2 (P34203) DNA topoisomerase 2 (EC 5.99.1.3) (DNA topoisomerase II)| Length = 1191 Score = 30.8 bits (68), Expect = 3.0 Identities = 15/59 (25%), Positives = 31/59 (52%), Gaps = 1/59 (1%) Frame = -3 Query: 399 KKNPNGPMYTSLGVMTRGTIIEVNVSEL-GLVTPAGKVVWGKYAQVTNNPENDGCINAV 226 K NP+GP + G+++ G +I ++ + T +G+ + + Q+TNN G + + Sbjct: 453 KSNPSGPSFDFCGMISLGGVIMNACKKVTNITTDSGETIMVRNEQLTNNKVLQGIVQVL 511
>PGPLA_DROME (Q95T64) Peptidoglycan-recognition protein-LA| Length = 368 Score = 30.0 bits (66), Expect = 5.1 Identities = 22/78 (28%), Positives = 34/78 (43%) Frame = +2 Query: 209 KLHTSKTALIQPSFSGLFVT*AYLPQTTFPAGVTRPSSLTFTSIIVPLVITPREVYIGPF 388 +LH +A S SGL LPQ F +PSS+ + +VI P Y GP Sbjct: 28 RLHNLTSAGSSTSSSGL-----PLPQNIFTNPAIQPSSVINLNHSTDVVIGPMTQYQGPV 82 Query: 389 GFFFTEIMSRLNVHFSSG 442 ++ + M + ++G Sbjct: 83 SIYYMDYMEAHAMQTAAG 100
>WRK46_ARATH (Q9SKD9) Probable WRKY transcription factor 46 (WRKY DNA-binding| protein 46) Length = 295 Score = 29.6 bits (65), Expect = 6.7 Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 4/72 (5%) Frame = +1 Query: 169 YKQCTHPFNQNCIKASHEQDSIDTAIILRVICNLSVFAPNNFSSRGYETKF----TNIHL 336 Y +CTH F Q+C+ Q S DT L + L NN +S T F TN ++ Sbjct: 126 YYRCTHRFTQDCLAVKQVQKS-DTDPSLFEVKYLGNHTCNNITSPKTTTNFSVSLTNTNI 184 Query: 337 DNCSPRHNTKRS 372 + H T++S Sbjct: 185 FEGNRVHVTEQS 196
>RS8E_AERPE (Q9YDY0) 30S ribosomal protein S8e| Length = 136 Score = 29.3 bits (64), Expect = 8.7 Identities = 21/79 (26%), Positives = 36/79 (45%) Frame = -3 Query: 456 AHVTHPELKCTFNLDIISVKKNPNGPMYTSLGVMTRGTIIEVNVSELGLVTPAGKVVWGK 277 A V++P+ I+ + + P Y G++ +G +I+ T G+ V Sbjct: 66 AVVSNPKTGEARKARILRIVETPAHREYARRGIIVKGAVID---------TTLGRAV--- 113 Query: 276 YAQVTNNPENDGCINAVLL 220 VT+ P +G +NAVLL Sbjct: 114 ---VTSRPGQEGVVNAVLL 129
>ARFE_ARATH (P93024) Auxin response factor 5 (Transcription factor MONOPTEROS)| (Auxin-responsive protein IAA24) Length = 902 Score = 29.3 bits (64), Expect = 8.7 Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 2/81 (2%) Frame = +1 Query: 193 NQNCIKASHEQDSIDTAIILRVICNLSVFAPNNF--SSRGYETKFTNIHLDNCSPRHNTK 366 N N A Q I +A + F+ +F +S G T +N+ D+CS R N+K Sbjct: 725 NNNTSFAQDVQSQITSASF----ADSQAFSRQDFPDNSGGTGTSSSNVDFDDCSLRQNSK 780 Query: 367 RSVHWTVWVFLHRNYVEVERT 429 S + R Y +V++T Sbjct: 781 GSSWQKIATPRVRTYTKVQKT 801
>RS8E_HALSA (Q9HPE9) 30S ribosomal protein S8e| Length = 124 Score = 29.3 bits (64), Expect = 8.7 Identities = 21/61 (34%), Positives = 27/61 (44%) Frame = -3 Query: 411 IISVKKNPNGPMYTSLGVMTRGTIIEVNVSELGLVTPAGKVVWGKYAQVTNNPENDGCIN 232 I V N P Y ++T+G IIE T AG A+VT+ P DG +N Sbjct: 74 IEDVSANDANPNYARRNIITKGAIIE---------TDAGT------ARVTSRPGQDGQVN 118 Query: 231 A 229 A Sbjct: 119 A 119 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 84,829,739 Number of Sequences: 219361 Number of extensions: 1832363 Number of successful extensions: 4111 Number of sequences better than 10.0: 35 Number of HSP's better than 10.0 without gapping: 4001 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4094 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5044307840 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
