ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags11n20
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_476711.1| Oryza sativa (japonica cultivar-group), mRNA 224 3e-55
2gb|AY111375.1| Zea mays CL38709_1 mRNA sequence 186 6e-44
3dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 92 3e-15
4dbj|AP004664.5| Oryza sativa (japonica cultivar-group) genomic D... 92 3e-15
5emb|CR936945.2| Medicago truncatula chromosome 5 clone mte1-67e6... 46 0.15
6gb|AC108871.3| Oryza sativa (japonica cultivar-group) chromosome... 46 0.15
7dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.15
8dbj|AK067123.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.15
9dbj|AK059481.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.15
10gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 46 0.15
11dbj|AP006535.1| Lotus japonicus genomic DNA, chromosome 2, clone... 46 0.15
12emb|BX649520.20| Zebrafish DNA sequence from clone DKEY-174E3 in... 44 0.57
13gb|AC171736.1| Lycopersicon esculentum chromosome 11 clone C11HB... 44 0.57
14gb|AC167815.3| Mus musculus BAC clone RP23-463H10 from chromosom... 42 2.3
15gb|AC138679.10| Mus musculus chromosome 5, clone RP23-177I4, com... 42 2.3
16gb|AC116950.5| Mus musculus BAC clone RP23-56K4 from 15, complet... 42 2.3
17dbj|AP004273.2| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
18gb|AC131803.3| Mus musculus BAC clone RP24-549I15 from chromosom... 42 2.3
19emb|AL672054.5| Mouse DNA sequence from clone RP23-237I22 on chr... 42 2.3
20gb|AF526127.1| Peromyscus maniculatus microsatellite BW4-1 sequence 40 9.0
21gb|AC099711.5| Mus musculus chromosome 15, clone RP23-397C11, co... 40 9.0
22gb|AC164581.7| Mus musculus 10 BAC RP23-45O2 (Roswell Park Cance... 40 9.0
23emb|AL109935.39|HSJ1022P6 Human DNA sequence from clone RP5-1022... 40 9.0
24emb|AL031532.1|SPCC777 S.pombe chromosome III cosmid c777 40 9.0
25emb|AL596264.13| Mouse DNA sequence from clone RP23-232G8 on chr... 40 9.0
26emb|CR788244.9| Zebrafish DNA sequence from clone DKEY-254A16 in... 40 9.0
27ref|NM_008571.1| Mus musculus mast cell protease 2 (Mcpt2), mRNA 40 9.0
28dbj|AK133521.1| Mus musculus 11 days pregnant adult female ovary... 40 9.0
29gb|AC163646.2| Mus musculus BAC clone RP23-207D1 from chromosome... 40 9.0
30emb|BX908749.6| Zebrafish DNA sequence from clone DKEY-247F18 in... 40 9.0
31gb|AY007570.1| Mus musculus strain C57BL/6 mouse mast cell prote... 40 9.0
32ref|NM_001023244.1| Schizosaccharomyces pombe 972h- hypothetical... 40 9.0
33dbj|AK015515.1| Mus musculus adult male testis cDNA, RIKEN full-... 40 9.0
34gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome 40 9.0
35gb|AC120051.5| Homo sapiens chromosome 8, clone RP11-809L8, comp... 40 9.0
36gb|AC131153.2| Homo sapiens 3 BAC RP11-264F21 (Roswell Park Canc... 40 9.0
37emb|AL929281.7| Zebrafish DNA sequence from clone CH211-237I22, ... 40 9.0
38dbj|AB053451.1| Sus scrofa DNA, constant regions and joining seg... 40 9.0
39gb|AC153949.3| Mus musculus 10 BAC RP24-366H8 (Roswell Park Canc... 40 9.0
40gb|AY104559.1| Zea mays PCO133879 mRNA sequence 40 9.0
41dbj|AP000892.4| Homo sapiens genomic DNA, chromosome 11q clone:C... 40 9.0
42gb|AC122448.3| Mus musculus BAC clone RP24-243B16 from 15, compl... 40 9.0
43emb|CT030191.7| M.truncatula DNA sequence from clone MTH2-29E15 ... 40 9.0
44gb|L08486.1|MUSSERPROA Mus musculus serine proteinase (MCP2) gen... 40 9.0
45gb|J05177.1|MUSPR2MC Mouse mast cell protease-2 (MMCP-2) mRNA, c... 40 9.0 
>ref|XM_476711.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3351

 Score =  224 bits (113), Expect = 3e-55
 Identities = 194/221 (87%)
 Strand = Plus / Minus

                                                                        
Query: 437  ctagttgtagatctttacaggcctctcaaacgaatggcggttctggttagcactatgtgc 496
            |||||| |||||||||||||| |||||||| |||||||||||||| |||||  | |||| 
Sbjct: 3351 ctagttatagatctttacaggtctctcaaatgaatggcggttctgattagcgttgtgtgt 3292

                                                                        
Query: 497  ctttcttggcgctgtgtctgggtgctccagtccaagatactgctcccaagctccatacat 556
            |||||| || || |||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct: 3291 ctttctaggagccgtgtctggatgctccagtccaagatattgctcccaagctccatacat 3232

                                                                        
Query: 557  gtttctctgaaatctcgtagctacactatcagaatcttcaaaatagtctggccggccaag 616
            ||||| ||||||||| | ||||||| | || ||||| |||||||| ||||| || |||||
Sbjct: 3231 gtttcgctgaaatcttgaagctacagtgtctgaatcctcaaaataatctgggcgaccaag 3172

                                                     
Query: 617  ggatatgtatgcaaatttccacttggagaaatcctcttctg 657
             |||||||| |||||||||||||| ||||||||||| ||||
Sbjct: 3171 tgatatgtaggcaaatttccactttgagaaatcctcatctg 3131
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>gb|AY111375.1| Zea mays CL38709_1 mRNA sequence
          Length = 1037

 Score =  186 bits (94), Expect = 6e-44
 Identities = 148/166 (89%)
 Strand = Plus / Plus

                                                                       
Query: 492 tgtgcctttcttggcgctgtgtctgggtgctccagtccaagatactgctcccaagctcca 551
           |||||||| || || ||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 662 tgtgccttcctaggagctgtgtctggatgttccagtccaagatactgctcccaagctcca 721

                                                                       
Query: 552 tacatgtttctctgaaatctcgtagctacactatcagaatcttcaaaatagtctggccgg 611
           |||||||||||||||||| |   ||||||| |||| |||||||||||||||||||| || 
Sbjct: 722 tacatgtttctctgaaattttaaagctacagtatctgaatcttcaaaatagtctggacga 781

                                                         
Query: 612 ccaagggatatgtatgcaaatttccacttggagaaatcctcttctg 657
           ||||| || ||||||||||| |||||||| ||||||||||| ||||
Sbjct: 782 ccaagtgaaatgtatgcaaacttccactttgagaaatcctcatctg 827
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 64/70 (91%)
 Strand = Plus / Minus

                                                                           
Query: 492     tgtgcctttcttggcgctgtgtctgggtgctccagtccaagatactgctcccaagctcca 551
               |||| |||||| || || |||||||| ||||||||||||||||| |||||||||||||||
Sbjct: 3455982 tgtgtctttctaggagccgtgtctggatgctccagtccaagatattgctcccaagctcca 3455923

                         
Query: 552     tacatgtttc 561
               ||||||||||
Sbjct: 3455922 tacatgtttc 3455913



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 44/47 (93%)
 Strand = Plus / Minus

                                                              
Query: 435     gtctagttgtagatctttacaggcctctcaaacgaatggcggttctg 481
               |||||||| |||||||||||||| |||||||| ||||||||||||||
Sbjct: 3456181 gtctagttatagatctttacaggtctctcaaatgaatggcggttctg 3456135



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 66/77 (85%)
 Strand = Plus / Minus

                                                                           
Query: 563     ctgaaatctcgtagctacactatcagaatcttcaaaatagtctggccggccaagggatat 622
               ||||||||| | ||||||| | || ||||| |||||||| ||||| || ||||| |||||
Sbjct: 3455827 ctgaaatcttgaagctacagtgtctgaatcctcaaaataatctgggcgaccaagtgatat 3455768

                                
Query: 623     gtatgcaaatttccact 639
               ||| |||||||||||||
Sbjct: 3455767 gtaggcaaatttccact 3455751



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 47/52 (90%), Gaps = 2/52 (3%)
 Strand = Plus / Minus

                                                                   
Query: 319     tgagcaaccagtcctgccatca--tatggtacacgatttattcaagccagca 368
               ||||||||| ||||| ||||||  |||||||||| |||||||||||||||||
Sbjct: 3456287 tgagcaacccgtcctaccatcaattatggtacacaatttattcaagccagca 3456236



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 112     catcatcaacaactctgcacc 132
               |||||||||||||||||||||
Sbjct: 5684537 catcatcaacaactctgcacc 5684517
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>dbj|AP004664.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0428D12
          Length = 141678

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 64/70 (91%)
 Strand = Plus / Minus

                                                                         
Query: 492   tgtgcctttcttggcgctgtgtctgggtgctccagtccaagatactgctcccaagctcca 551
             |||| |||||| || || |||||||| ||||||||||||||||| |||||||||||||||
Sbjct: 95802 tgtgtctttctaggagccgtgtctggatgctccagtccaagatattgctcccaagctcca 95743

                       
Query: 552   tacatgtttc 561
             ||||||||||
Sbjct: 95742 tacatgtttc 95733



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 44/47 (93%)
 Strand = Plus / Minus

                                                            
Query: 435   gtctagttgtagatctttacaggcctctcaaacgaatggcggttctg 481
             |||||||| |||||||||||||| |||||||| ||||||||||||||
Sbjct: 96001 gtctagttatagatctttacaggtctctcaaatgaatggcggttctg 95955



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 66/77 (85%)
 Strand = Plus / Minus

                                                                         
Query: 563   ctgaaatctcgtagctacactatcagaatcttcaaaatagtctggccggccaagggatat 622
             ||||||||| | ||||||| | || ||||| |||||||| ||||| || ||||| |||||
Sbjct: 95647 ctgaaatcttgaagctacagtgtctgaatcctcaaaataatctgggcgaccaagtgatat 95588

                              
Query: 623   gtatgcaaatttccact 639
             ||| |||||||||||||
Sbjct: 95587 gtaggcaaatttccact 95571



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 47/52 (90%), Gaps = 2/52 (3%)
 Strand = Plus / Minus

                                                                 
Query: 319   tgagcaaccagtcctgccatca--tatggtacacgatttattcaagccagca 368
             ||||||||| ||||| ||||||  |||||||||| |||||||||||||||||
Sbjct: 96107 tgagcaacccgtcctaccatcaattatggtacacaatttattcaagccagca 96056
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>emb|CR936945.2| Medicago truncatula chromosome 5 clone mte1-67e6, COMPLETE SEQUENCE
          Length = 127675

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 519  tgctccagtccaagatactgctcccaagctccata 553
            |||||||  |||||||||||||||||||| |||||
Sbjct: 5248 tgctccaagccaagatactgctcccaagcaccata 5214
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>gb|AC108871.3| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBb0077M24, complete sequence
          Length = 128920

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                
Query: 519   tgctccagtccaagatactgctcccaagctccata 553
             |||||||  ||||||||||||||||| ||||||||
Sbjct: 83038 tgctccaaaccaagatactgctcccaggctccata 83072
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                   
Query: 519      tgctccagtccaagatactgctcccaagctccata 553
                |||||||  ||||||||||||||||| ||||||||
Sbjct: 20648030 tgctccaaaccaagatactgctcccaggctccata 20648064
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>dbj|AK067123.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013096M22, full
            insert sequence
          Length = 3975

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 519  tgctccagtccaagatactgctcccaagctccata 553
            |||||||  ||||||||||||||||| ||||||||
Sbjct: 3266 tgctccaaaccaagatactgctcccaggctccata 3232
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>dbj|AK059481.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-028-F05, full
           insert sequence
          Length = 1098

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 519 tgctccagtccaagatactgctcccaagctccata 553
           |||||||  ||||||||||||||||| ||||||||
Sbjct: 429 tgctccaaaccaagatactgctcccaggctccata 395
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                   
Query: 519      tgctccagtccaagatactgctcccaagctccata 553
                |||||||  ||||||||||||||||| ||||||||
Sbjct: 20958265 tgctccaaaccaagatactgctcccaggctccata 20958299
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>dbj|AP006535.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT02D13, TM0546,
             complete sequence
          Length = 107979

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                
Query: 519   tgctccagtccaagatactgctcccaagctccata 553
             |||||||  |||||||||||||||||||| |||||
Sbjct: 76930 tgctccaaaccaagatactgctcccaagcaccata 76964
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>emb|BX649520.20| Zebrafish DNA sequence from clone DKEY-174E3 in linkage group 13,
             complete sequence
          Length = 219709

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 239   gttgggtcatctctgcaaaaactttatata 268
             ||||||| | ||||||||||||||||||||
Sbjct: 76164 gttgggtgagctctgcaaaaactttatata 76193
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>gb|AC171736.1| Lycopersicon esculentum chromosome 11 clone C11HBa0323E19, complete
             sequence
          Length = 141216

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 528   ccaagatactgctcccaagctccata 553
             |||||||||||||||||||| |||||
Sbjct: 45138 ccaagatactgctcccaagcaccata 45113
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>gb|AC167815.3| Mus musculus BAC clone RP23-463H10 from chromosome 5, complete sequence
          Length = 198336

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 195   agaaaagaaaaacagcctcct 215
             |||||||||||||||||||||
Sbjct: 39505 agaaaagaaaaacagcctcct 39525
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>gb|AC138679.10| Mus musculus chromosome 5, clone RP23-177I4, complete sequence
          Length = 230184

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 195   agaaaagaaaaacagcctcct 215
             |||||||||||||||||||||
Sbjct: 80686 agaaaagaaaaacagcctcct 80666
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>gb|AC116950.5| Mus musculus BAC clone RP23-56K4 from 15, complete sequence
          Length = 225940

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 196    gaaaagaaaaacagcctcctc 216
              |||||||||||||||||||||
Sbjct: 203855 gaaaagaaaaacagcctcctc 203835
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>dbj|AP004273.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0431A02
          Length = 165038

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 112    catcatcaacaactctgcacc 132
              |||||||||||||||||||||
Sbjct: 146229 catcatcaacaactctgcacc 146209
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>gb|AC131803.3| Mus musculus BAC clone RP24-549I15 from chromosome 5, complete sequence
          Length = 168439

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 195    agaaaagaaaaacagcctcct 215
              |||||||||||||||||||||
Sbjct: 127593 agaaaagaaaaacagcctcct 127613
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>emb|AL672054.5| Mouse DNA sequence from clone RP23-237I22 on chromosome X, complete
              sequence
          Length = 187770

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 194    aagaaaagaaaaacagcctcc 214
              |||||||||||||||||||||
Sbjct: 129461 aagaaaagaaaaacagcctcc 129441
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>gb|AF526127.1| Peromyscus maniculatus microsatellite BW4-1 sequence
          Length = 267

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 194 aagaaaagaaaaacagcctc 213
           ||||||||||||||||||||
Sbjct: 169 aagaaaagaaaaacagcctc 150
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>gb|AC099711.5| Mus musculus chromosome 15, clone RP23-397C11, complete sequence
          Length = 207144

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 432    actgtctagttgtagatctt 451
              ||||||||||||||||||||
Sbjct: 130077 actgtctagttgtagatctt 130096
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>gb|AC164581.7| Mus musculus 10 BAC RP23-45O2 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 199422

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 266    atatccagggcagagtgcgg 285
              ||||||||||||||||||||
Sbjct: 168091 atatccagggcagagtgcgg 168072
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>emb|AL109935.39|HSJ1022P6 Human DNA sequence from clone RP5-1022P6 on chromosome 20 Contains the
              RPS18P1 gene for ribosomal protein S18 pseudogene 1, the
              gene for a novel protein (KIAA1434), an EIF4E (eukaryotic
              translation initiation factor 4E) pseudogene, three novel
              genes and two CpG islands, complete sequence
          Length = 178601

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 194    aagaaaagaaaaacagcctc 213
              ||||||||||||||||||||
Sbjct: 142654 aagaaaagaaaaacagcctc 142673
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>emb|AL031532.1|SPCC777 S.pombe chromosome III cosmid c777
          Length = 29255

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 192   ggaagaaaagaaaaacagcc 211
             ||||||||||||||||||||
Sbjct: 13286 ggaagaaaagaaaaacagcc 13305
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>emb|AL596264.13| Mouse DNA sequence from clone RP23-232G8 on chromosome 11 Contains a
             novel gene, complete sequence
          Length = 175724

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 426   ctcacaactgtctagttgta 445
             ||||||||||||||||||||
Sbjct: 21378 ctcacaactgtctagttgta 21397
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>emb|CR788244.9| Zebrafish DNA sequence from clone DKEY-254A16 in linkage group 18,
             complete sequence
          Length = 208154

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 614   aagggatatgtatgcaaatt 633
             ||||||||||||||||||||
Sbjct: 90480 aagggatatgtatgcaaatt 90461
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>ref|NM_008571.1| Mus musculus mast cell protease 2 (Mcpt2), mRNA
          Length = 971

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 259 actttatatatccagggcag 278
           ||||||||||||||||||||
Sbjct: 750 actttatatatccagggcag 731
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>dbj|AK133521.1| Mus musculus 11 days pregnant adult female ovary and uterus cDNA,
           RIKEN full-length enriched library, clone:5033416M10
           product:mast cell protease 2, full insert sequence
          Length = 971

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 259 actttatatatccagggcag 278
           ||||||||||||||||||||
Sbjct: 751 actttatatatccagggcag 732
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>gb|AC163646.2| Mus musculus BAC clone RP23-207D1 from chromosome 14, complete sequence
          Length = 185289

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 259   actttatatatccagggcag 278
             ||||||||||||||||||||
Sbjct: 20505 actttatatatccagggcag 20524
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>emb|BX908749.6| Zebrafish DNA sequence from clone DKEY-247F18 in linkage group 18,
             complete sequence
          Length = 186014

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 614   aagggatatgtatgcaaatt 633
             ||||||||||||||||||||
Sbjct: 94295 aagggatatgtatgcaaatt 94276
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>gb|AY007570.1| Mus musculus strain C57BL/6 mouse mast cell protease-2 mRNA,
           complete cds
          Length = 971

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 259 actttatatatccagggcag 278
           ||||||||||||||||||||
Sbjct: 750 actttatatatccagggcag 731
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>ref|NM_001023244.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPCC777.08c),
           partial mRNA
          Length = 1269

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 192 ggaagaaaagaaaaacagcc 211
           ||||||||||||||||||||
Sbjct: 906 ggaagaaaagaaaaacagcc 887
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>dbj|AK015515.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
           library, clone:4930466K18 product:unclassifiable, full
           insert sequence
          Length = 908

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 266 atatccagggcagagtgcgg 285
           ||||||||||||||||||||
Sbjct: 443 atatccagggcagagtgcgg 462
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>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome
          Length = 3304561

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 11      aagacgcagccactatatca 30
               ||||||||||||||||||||
Sbjct: 1670704 aagacgcagccactatatca 1670723
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>gb|AC120051.5| Homo sapiens chromosome 8, clone RP11-809L8, complete sequence
          Length = 200827

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 323   caaccagtcctgccatcata 342
             ||||||||||||||||||||
Sbjct: 94847 caaccagtcctgccatcata 94828
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>gb|AC131153.2| Homo sapiens 3 BAC RP11-264F21 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 126619

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 543   caagctccatacatgtttct 562
             ||||||||||||||||||||
Sbjct: 33075 caagctccatacatgtttct 33094
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>emb|AL929281.7| Zebrafish DNA sequence from clone CH211-237I22, complete sequence
          Length = 148678

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 614   aagggatatgtatgcaaatt 633
             ||||||||||||||||||||
Sbjct: 27621 aagggatatgtatgcaaatt 27602
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>dbj|AB053451.1| Sus scrofa DNA, constant regions and joining segments of T cell
             receptor alpha/delta chain
          Length = 131286

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 414   tcactcctgcttctcacaac 433
             ||||||||||||||||||||
Sbjct: 91614 tcactcctgcttctcacaac 91633
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>gb|AC153949.3| Mus musculus 10 BAC RP24-366H8 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 145982

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 266   atatccagggcagagtgcgg 285
             ||||||||||||||||||||
Sbjct: 82915 atatccagggcagagtgcgg 82934
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>gb|AY104559.1| Zea mays PCO133879 mRNA sequence
          Length = 962

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                               
Query: 617 ggatatgtatgcaaatttccacttggagaaatcctc 652
           ||||||| ||||||  |||||||||||||| |||||
Sbjct: 272 ggatatgaatgcaagcttccacttggagaagtcctc 237
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>dbj|AP000892.4| Homo sapiens genomic DNA, chromosome 11q clone:CMB9-94B1, complete
             sequence
          Length = 149843

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 525   agtccaagatactgctcccaagct 548
             |||||||||| |||||||||||||
Sbjct: 30198 agtccaagatcctgctcccaagct 30221
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>gb|AC122448.3| Mus musculus BAC clone RP24-243B16 from 15, complete sequence
          Length = 159923

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 195  agaaaagaaaaacagcctcc 214
            ||||||||||||||||||||
Sbjct: 3882 agaaaagaaaaacagcctcc 3863
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>emb|CT030191.7| M.truncatula DNA sequence from clone MTH2-29E15 on chromosome 3,
             complete sequence
          Length = 107971

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 553   acatgtttctctgaaatctc 572
             ||||||||||||||||||||
Sbjct: 36264 acatgtttctctgaaatctc 36245
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>gb|L08486.1|MUSSERPROA Mus musculus serine proteinase (MCP2) gene, exons 1-5 and complete
            cds
          Length = 4457

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 259  actttatatatccagggcag 278
            ||||||||||||||||||||
Sbjct: 3653 actttatatatccagggcag 3634
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>gb|J05177.1|MUSPR2MC Mouse mast cell protease-2 (MMCP-2) mRNA, complete cds
          Length = 953

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 259 actttatatatccagggcag 278
           ||||||||||||||||||||
Sbjct: 732 actttatatatccagggcag 713


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,905,418
Number of Sequences: 3902068
Number of extensions: 6905418
Number of successful extensions: 150520
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 150209
Number of HSP's gapped (non-prelim): 311
length of query: 657
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 634
effective length of database: 17,143,297,704
effective search space: 10868850744336
effective search space used: 10868850744336
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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