ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbags11n18 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ000226.1|HVJ000226 Hordeum vulgare mRNA for expressed sequence tag Length = 334 Score = 654 bits (330), Expect = 0.0 Identities = 333/334 (99%) Strand = Plus / Minus Query: 245 ccttgtacttcatgctctcgagcgtgaagccgggcatgtcaaaggagagggcaaacttct 304 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 334 ccttgtacttcatgctctcgagcgtgaagccgggcatgtcaaaggagagggcaaacttct 275 Query: 305 cgacctcgaccttgaggttctcaatgtccttgttgttcaccaggcccttggagaagtcct 364 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 274 caacctcgaccttgaggttctcaatgtccttgttgttcaccaggcccttggagaagtcct 215 Query: 365 tgagcagcttcccgtgctccttctggatgttcaggcagatggtcactgcctggtggagga 424 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 214 tgagcagcttcccgtgctccttctggatgttcaggcagatggtcactgcctggtggagga 155 Query: 425 actcggcgatctgctcgaagtccttctcaaccagacccctggaggtcatagcaggagcac 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 154 actcggcgatctgctcgaagtccttctcaaccagacccctggaggtcatagcaggagcac 95 Query: 485 caatgcggacaccacccggggacaatgcactgctgtcaccgaagacagcattcttgttca 544 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94 caatgcggacaccacccggggacaatgcactgctgtcaccgaagacagcattcttgttca 35 Query: 545 atgtaatgctacaaaggtcacacatcttttcgac 578 |||||||||||||||||||||||||||||||||| Sbjct: 34 atgtaatgctacaaaggtcacacatcttttcgac 1
>dbj|AK105983.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-G03, full insert sequence Length = 1153 Score = 496 bits (250), Expect = e-137 Identities = 349/382 (91%) Strand = Plus / Minus Query: 238 tcctactccttgtacttcatgctctcgagcgtgaagccgggcatgtcaaaggagagggca 297 ||||||||||||||||||||||| ||||| ||||||||||||||||| |||||| ||| Sbjct: 864 tcctactccttgtacttcatgctgtcgagggtgaagccgggcatgtcgaaggaggtggcg 805 Query: 298 aacttctcgacctcgaccttgaggttctcaatgtccttgttgttcaccaggcccttggag 357 |||||||||||||| | |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 804 aacttctcgacctccagcttgaggttctcgatgtccttgttgttcaccaggcccttggag 745 Query: 358 aagtccttgagcagcttcccgtgctccttctggatgttcaggcagatggtcactgcctgg 417 ||||||||||| ||||| |||||||||||||||||||| |||||||||||||| |||||| Sbjct: 744 aagtccttgaggagcttgccgtgctccttctggatgttgaggcagatggtcacggcctgg 685 Query: 418 tggaggaactcggcgatctgctcgaagtccttctcaaccagacccctggaggtcatagca 477 |||||||||||| |||||||||| ||||||||||| || ||||||||||| ||||| ||| Sbjct: 684 tggaggaactcgccgatctgctcaaagtccttctcgacaagacccctggatgtcatcgca 625 Query: 478 ggagcaccaatgcggacaccacccggggacaatgcactgctgtcaccgaagacagcattc 537 |||| ||||||||||||||| || || | |||||||||||||||||| |||||||||||| Sbjct: 624 ggagtaccaatgcggacaccgccaggagccaatgcactgctgtcaccaaagacagcattc 565 Query: 538 ttgttcaatgtaatgctacaaaggtcacacatcttttcgaccttgtttccagtcaagcca 597 ||||| | ||||||||| ||||||||||||||||| || |||||||| |||||||||||| Sbjct: 564 ttgttaagtgtaatgctgcaaaggtcacacatcttctcaaccttgttgccagtcaagcca 505 Query: 598 agagggcggagatcccatagaa 619 |||||||| |||||||| |||| Sbjct: 504 agagggcgaagatcccagagaa 483
>dbj|AK101450.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033039N02, full insert sequence Length = 1896 Score = 496 bits (250), Expect = e-137 Identities = 349/382 (91%) Strand = Plus / Minus Query: 238 tcctactccttgtacttcatgctctcgagcgtgaagccgggcatgtcaaaggagagggca 297 ||||||||||||||||||||||| ||||| ||||||||||||||||| |||||| ||| Sbjct: 1499 tcctactccttgtacttcatgctgtcgagggtgaagccgggcatgtcgaaggaggtggcg 1440 Query: 298 aacttctcgacctcgaccttgaggttctcaatgtccttgttgttcaccaggcccttggag 357 |||||||||||||| | |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1439 aacttctcgacctccagcttgaggttctcgatgtccttgttgttcaccaggcccttggag 1380 Query: 358 aagtccttgagcagcttcccgtgctccttctggatgttcaggcagatggtcactgcctgg 417 ||||||||||| ||||| |||||||||||||||||||| |||||||||||||| |||||| Sbjct: 1379 aagtccttgaggagcttgccgtgctccttctggatgttgaggcagatggtcacggcctgg 1320 Query: 418 tggaggaactcggcgatctgctcgaagtccttctcaaccagacccctggaggtcatagca 477 |||||||||||| |||||||||| ||||||||||| || ||||||||||| ||||| ||| Sbjct: 1319 tggaggaactcgccgatctgctcaaagtccttctcgacaagacccctggatgtcatcgca 1260 Query: 478 ggagcaccaatgcggacaccacccggggacaatgcactgctgtcaccgaagacagcattc 537 |||| ||||||||||||||| || || | |||||||||||||||||| |||||||||||| Sbjct: 1259 ggagtaccaatgcggacaccgccaggagccaatgcactgctgtcaccaaagacagcattc 1200 Query: 538 ttgttcaatgtaatgctacaaaggtcacacatcttttcgaccttgtttccagtcaagcca 597 ||||| | ||||||||| ||||||||||||||||| || |||||||| |||||||||||| Sbjct: 1199 ttgttaagtgtaatgctgcaaaggtcacacatcttctcaaccttgttgccagtcaagcca 1140 Query: 598 agagggcggagatcccatagaa 619 |||||||| |||||||| |||| Sbjct: 1139 agagggcgaagatcccagagaa 1118
>dbj|AK071541.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023100I04, full insert sequence Length = 1811 Score = 496 bits (250), Expect = e-137 Identities = 349/382 (91%) Strand = Plus / Minus Query: 238 tcctactccttgtacttcatgctctcgagcgtgaagccgggcatgtcaaaggagagggca 297 ||||||||||||||||||||||| ||||| ||||||||||||||||| |||||| ||| Sbjct: 1499 tcctactccttgtacttcatgctgtcgagggtgaagccgggcatgtcgaaggaggtggcg 1440 Query: 298 aacttctcgacctcgaccttgaggttctcaatgtccttgttgttcaccaggcccttggag 357 |||||||||||||| | |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1439 aacttctcgacctccagcttgaggttctcgatgtccttgttgttcaccaggcccttggag 1380 Query: 358 aagtccttgagcagcttcccgtgctccttctggatgttcaggcagatggtcactgcctgg 417 ||||||||||| ||||| |||||||||||||||||||| |||||||||||||| |||||| Sbjct: 1379 aagtccttgaggagcttgccgtgctccttctggatgttgaggcagatggtcacggcctgg 1320 Query: 418 tggaggaactcggcgatctgctcgaagtccttctcaaccagacccctggaggtcatagca 477 |||||||||||| |||||||||| ||||||||||| || ||||||||||| ||||| ||| Sbjct: 1319 tggaggaactcgccgatctgctcaaagtccttctcgacaagacccctggatgtcatcgca 1260 Query: 478 ggagcaccaatgcggacaccacccggggacaatgcactgctgtcaccgaagacagcattc 537 |||| ||||||||||||||| || || | |||||||||||||||||| |||||||||||| Sbjct: 1259 ggagtaccaatgcggacaccgccaggagccaatgcactgctgtcaccaaagacagcattc 1200 Query: 538 ttgttcaatgtaatgctacaaaggtcacacatcttttcgaccttgtttccagtcaagcca 597 ||||| | ||||||||| ||||||||||||||||| || |||||||| |||||||||||| Sbjct: 1199 ttgttaagtgtaatgctgcaaaggtcacacatcttctcaaccttgttgccagtcaagcca 1140 Query: 598 agagggcggagatcccatagaa 619 |||||||| |||||||| |||| Sbjct: 1139 agagggcgaagatcccagagaa 1118
>dbj|AK105624.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-C10, full insert sequence Length = 1811 Score = 488 bits (246), Expect = e-134 Identities = 348/382 (91%) Strand = Plus / Minus Query: 238 tcctactccttgtacttcatgctctcgagcgtgaagccgggcatgtcaaaggagagggca 297 ||||||||||||||||||||||| ||||| ||||||||||||||||| |||||| ||| Sbjct: 1498 tcctactccttgtacttcatgctgtcgagggtgaagccgggcatgtcgaaggaggtggcg 1439 Query: 298 aacttctcgacctcgaccttgaggttctcaatgtccttgttgttcaccaggcccttggag 357 |||||||||||||| | |||||||||||| | |||||||||||||||||||||||||||| Sbjct: 1438 aacttctcgacctccagcttgaggttctcgacgtccttgttgttcaccaggcccttggag 1379 Query: 358 aagtccttgagcagcttcccgtgctccttctggatgttcaggcagatggtcactgcctgg 417 ||||||||||| ||||| |||||||||||||||||||| |||||||||||||| |||||| Sbjct: 1378 aagtccttgaggagcttgccgtgctccttctggatgttgaggcagatggtcacggcctgg 1319 Query: 418 tggaggaactcggcgatctgctcgaagtccttctcaaccagacccctggaggtcatagca 477 |||||||||||| |||||||||| ||||||||||| || ||||||||||| ||||| ||| Sbjct: 1318 tggaggaactcgccgatctgctcaaagtccttctcgacaagacccctggatgtcatcgca 1259 Query: 478 ggagcaccaatgcggacaccacccggggacaatgcactgctgtcaccgaagacagcattc 537 |||| ||||||||||||||| || || | |||||||||||||||||| |||||||||||| Sbjct: 1258 ggagtaccaatgcggacaccgccaggagccaatgcactgctgtcaccaaagacagcattc 1199 Query: 538 ttgttcaatgtaatgctacaaaggtcacacatcttttcgaccttgtttccagtcaagcca 597 ||||| | ||||||||| ||||||||||||||||| || |||||||| |||||||||||| Sbjct: 1198 ttgttaagtgtaatgctgcaaaggtcacacatcttctcaaccttgttgccagtcaagcca 1139 Query: 598 agagggcggagatcccatagaa 619 |||||||| |||||||| |||| Sbjct: 1138 agagggcgaagatcccagagaa 1117
>gb|AY105338.1| Zea mays PCO102700 mRNA sequence Length = 1951 Score = 460 bits (232), Expect = e-126 Identities = 343/380 (90%) Strand = Plus / Minus Query: 240 ctactccttgtacttcatgctctcgagcgtgaagccgggcatgtcaaaggagagggcaaa 299 |||||||||||| ||||||||||| |||||||| || |||||||| |||||| |||||| Sbjct: 1624 ctactccttgtatttcatgctctcaagcgtgaacccaggcatgtcgaaggagtcggcaaa 1565 Query: 300 cttctcgacctcgaccttgaggttctcaatgtccttgttgttcaccaggcccttggagaa 359 |||||| |||| ||||||||||||||| ||||||||||||||||||||||||||| ||| Sbjct: 1564 cttctccacctggaccttgaggttctcgatgtccttgttgttcaccaggcccttgttgaa 1505 Query: 360 gtccttgagcagcttcccgtgctccttctggatgttcaggcagatggtcactgcctggtg 419 ||||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 1504 gtccttgaggagcttgccgtactccttctggatgttcaggcagatggtcactgcctggtg 1445 Query: 420 gaggaactcggcgatctgctcgaagtccttctcaaccagacccctggaggtcatagcagg 479 ||||||||| | ||||||||||| |||||||| | |||||||| |||||||| || || Sbjct: 1444 gaggaactccccaatctgctcgaaatccttctccagtagacccctcgaggtcattgctgg 1385 Query: 480 agcaccaatgcggacaccacccggggacaatgcactgctgtcaccgaagacagcattctt 539 || |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 1384 cgcgccaatgcggacaccacccggagacaatgcactgctgtcaccgaagacagcattctt 1325 Query: 540 gttcaatgtaatgctacaaaggtcacacatcttttcgaccttgtttccagtcaagccaag 599 ||||||||| ||| ||||| ||||| | |||||||||||||||||||||||||||||| Sbjct: 1324 gttcaatgtgatgtggcaaagatcacatagcttttcgaccttgtttccagtcaagccaag 1265 Query: 600 agggcggagatcccatagaa 619 |||||||||||||| |||| Sbjct: 1264 ggggcggagatcccagagaa 1245
>gb|AC137752.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0041C22, complete sequence Length = 161172 Score = 333 bits (168), Expect = 4e-88 Identities = 225/244 (92%) Strand = Plus / Minus Query: 238 tcctactccttgtacttcatgctctcgagcgtgaagccgggcatgtcaaaggagagggca 297 ||||||||||||||||||||||| ||||| ||||||||||||||||| |||||| ||| Sbjct: 86750 tcctactccttgtacttcatgctgtcgagggtgaagccgggcatgtcgaaggaggtggcg 86691 Query: 298 aacttctcgacctcgaccttgaggttctcaatgtccttgttgttcaccaggcccttggag 357 |||||||||||||| | |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 86690 aacttctcgacctccagcttgaggttctcgatgtccttgttgttcaccaggcccttggag 86631 Query: 358 aagtccttgagcagcttcccgtgctccttctggatgttcaggcagatggtcactgcctgg 417 ||||||||||| ||||| |||||||||||||||||||| |||||||||||||| |||||| Sbjct: 86630 aagtccttgaggagcttgccgtgctccttctggatgttgaggcagatggtcacggcctgg 86571 Query: 418 tggaggaactcggcgatctgctcgaagtccttctcaaccagacccctggaggtcatagca 477 |||||||||||| |||||||||| ||||||||||| || ||||||||||| ||||| ||| Sbjct: 86570 tggaggaactcgccgatctgctcaaagtccttctcgacaagacccctggatgtcatcgca 86511 Query: 478 ggag 481 |||| Sbjct: 86510 ggag 86507 Score = 125 bits (63), Expect = 2e-25 Identities = 93/103 (90%) Strand = Plus / Minus Query: 482 caccaatgcggacaccacccggggacaatgcactgctgtcaccgaagacagcattcttgt 541 |||||||||||||||| || || | |||||||||||||||||| |||||||||||||||| Sbjct: 86239 caccaatgcggacaccgccaggagccaatgcactgctgtcaccaaagacagcattcttgt 86180 Query: 542 tcaatgtaatgctacaaaggtcacacatcttttcgaccttgtt 584 | | ||||||||| ||||||||||||||||| || |||||||| Sbjct: 86179 taagtgtaatgctgcaaaggtcacacatcttctcaaccttgtt 86137 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 586 ccagtcaagccaagagggcggagatcccatagaa 619 |||||||||||||||||||| |||||||| |||| Sbjct: 86042 ccagtcaagccaagagggcgaagatcccagagaa 86009
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 333 bits (168), Expect = 4e-88 Identities = 225/244 (92%) Strand = Plus / Minus Query: 238 tcctactccttgtacttcatgctctcgagcgtgaagccgggcatgtcaaaggagagggca 297 ||||||||||||||||||||||| ||||| ||||||||||||||||| |||||| ||| Sbjct: 14863684 tcctactccttgtacttcatgctgtcgagggtgaagccgggcatgtcgaaggaggtggcg 14863625 Query: 298 aacttctcgacctcgaccttgaggttctcaatgtccttgttgttcaccaggcccttggag 357 |||||||||||||| | |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 14863624 aacttctcgacctccagcttgaggttctcgatgtccttgttgttcaccaggcccttggag 14863565 Query: 358 aagtccttgagcagcttcccgtgctccttctggatgttcaggcagatggtcactgcctgg 417 ||||||||||| ||||| |||||||||||||||||||| |||||||||||||| |||||| Sbjct: 14863564 aagtccttgaggagcttgccgtgctccttctggatgttgaggcagatggtcacggcctgg 14863505 Query: 418 tggaggaactcggcgatctgctcgaagtccttctcaaccagacccctggaggtcatagca 477 |||||||||||| |||||||||| ||||||||||| || ||||||||||| ||||| ||| Sbjct: 14863504 tggaggaactcgccgatctgctcaaagtccttctcgacaagacccctggatgtcatcgca 14863445 Query: 478 ggag 481 |||| Sbjct: 14863444 ggag 14863441 Score = 125 bits (63), Expect = 2e-25 Identities = 93/103 (90%) Strand = Plus / Minus Query: 482 caccaatgcggacaccacccggggacaatgcactgctgtcaccgaagacagcattcttgt 541 |||||||||||||||| || || | |||||||||||||||||| |||||||||||||||| Sbjct: 14863173 caccaatgcggacaccgccaggagccaatgcactgctgtcaccaaagacagcattcttgt 14863114 Query: 542 tcaatgtaatgctacaaaggtcacacatcttttcgaccttgtt 584 | | ||||||||| ||||||||||||||||| || |||||||| Sbjct: 14863113 taagtgtaatgctgcaaaggtcacacatcttctcaaccttgtt 14863071 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 586 ccagtcaagccaagagggcggagatcccatagaa 619 |||||||||||||||||||| |||||||| |||| Sbjct: 14862976 ccagtcaagccaagagggcgaagatcccagagaa 14862943
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 333 bits (168), Expect = 4e-88 Identities = 225/244 (92%) Strand = Plus / Minus Query: 238 tcctactccttgtacttcatgctctcgagcgtgaagccgggcatgtcaaaggagagggca 297 ||||||||||||||||||||||| ||||| ||||||||||||||||| |||||| ||| Sbjct: 14943651 tcctactccttgtacttcatgctgtcgagggtgaagccgggcatgtcgaaggaggtggcg 14943592 Query: 298 aacttctcgacctcgaccttgaggttctcaatgtccttgttgttcaccaggcccttggag 357 |||||||||||||| | |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 14943591 aacttctcgacctccagcttgaggttctcgatgtccttgttgttcaccaggcccttggag 14943532 Query: 358 aagtccttgagcagcttcccgtgctccttctggatgttcaggcagatggtcactgcctgg 417 ||||||||||| ||||| |||||||||||||||||||| |||||||||||||| |||||| Sbjct: 14943531 aagtccttgaggagcttgccgtgctccttctggatgttgaggcagatggtcacggcctgg 14943472 Query: 418 tggaggaactcggcgatctgctcgaagtccttctcaaccagacccctggaggtcatagca 477 |||||||||||| |||||||||| ||||||||||| || ||||||||||| ||||| ||| Sbjct: 14943471 tggaggaactcgccgatctgctcaaagtccttctcgacaagacccctggatgtcatcgca 14943412 Query: 478 ggag 481 |||| Sbjct: 14943411 ggag 14943408 Score = 125 bits (63), Expect = 2e-25 Identities = 93/103 (90%) Strand = Plus / Minus Query: 482 caccaatgcggacaccacccggggacaatgcactgctgtcaccgaagacagcattcttgt 541 |||||||||||||||| || || | |||||||||||||||||| |||||||||||||||| Sbjct: 14943140 caccaatgcggacaccgccaggagccaatgcactgctgtcaccaaagacagcattcttgt 14943081 Query: 542 tcaatgtaatgctacaaaggtcacacatcttttcgaccttgtt 584 | | ||||||||| ||||||||||||||||| || |||||||| Sbjct: 14943080 taagtgtaatgctgcaaaggtcacacatcttctcaaccttgtt 14943038 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 586 ccagtcaagccaagagggcggagatcccatagaa 619 |||||||||||||||||||| |||||||| |||| Sbjct: 14942943 ccagtcaagccaagagggcgaagatcccagagaa 14942910
>dbj|AK101088.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033024L02, full insert sequence Length = 1944 Score = 242 bits (122), Expect = 1e-60 Identities = 275/326 (84%) Strand = Plus / Minus Query: 294 ggcaaacttctcgacctcgaccttgaggttctcaatgtccttgttgttcaccaggccctt 353 |||||||||||| ||||| || |||||| ||||||||||||||||||| ||||||||| Sbjct: 1640 ggcaaacttctccacctccgccctgaggtcctcaatgtccttgttgttctccaggccctc 1581 Query: 354 ggagaagtccttgagcagcttcccgtgctccttctggatgttcaggcagatggtcactgc 413 | ||||| |||||| ||||| || |||||||||| | | || ||||||||||||||| Sbjct: 1580 gttgaagtacttgagaagcttgccacgctccttctgaacatccaagcagatggtcactgc 1521 Query: 414 ctggtggaggaactcggcgatctgctcgaagtccttctcaaccagacccctggaggtcat 473 |||||| ||||||||||||||||| | ||||||| ||| |||| |||||| || ||||| Sbjct: 1520 ctggtgaaggaactcggcgatctgtacaaagtcctcctctaccaaaccccttgatgtcat 1461 Query: 474 agcaggagcaccaatgcggacaccacccggggacaatgcactgctgtcaccgaagacagc 533 ||||| | |||||||||||||||||| || |||| ||||||||| || || |||||||| Sbjct: 1460 ggcaggtgtaccaatgcggacaccaccaggtgacattgcactgctatccccaaagacagc 1401 Query: 534 attcttgttcaatgtaatgctacaaaggtcacacatcttttcgaccttgtttccagtcaa 593 ||| ||||||| ||||||||| || | ||||| | ||| || || ||||| |||||||| Sbjct: 1400 atttttgttcagtgtaatgctgcacaaatcacagaccttctcaactttgttaccagtcaa 1341 Query: 594 gccaagagggcggagatcccatagaa 619 |||||||||||| |||||||| |||| Sbjct: 1340 gccaagagggcgcagatcccagagaa 1315
>gb|AF498509.1| Zea mays cultivar DE811 hydroxymethyltransferase-like protein gene, 3'UTR and partial cds Length = 375 Score = 190 bits (96), Expect = 4e-45 Identities = 140/155 (90%) Strand = Plus / Plus Query: 240 ctactccttgtacttcatgctctcgagcgtgaagccgggcatgtcaaaggagagggcaaa 299 |||||||||||| ||||||||||| |||||||| || |||||||| |||||| |||||| Sbjct: 221 ctactccttgtatttcatgctctcaagcgtgaacccaggcatgtcgaaggagtcggcaaa 280 Query: 300 cttctcgacctcgaccttgaggttctcaatgtccttgttgttcaccaggcccttggagaa 359 |||||| |||| ||||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 281 cttctccacctggaccttgaggttctcaatgtccttgttgttcaccangcccttgttgaa 340 Query: 360 gtccttgagcagcttcccgtgctccttctggatgt 394 ||||||||| ||||| |||| |||||||||||||| Sbjct: 341 gtccttgaggagcttgccgtactccttctggatgt 375
>gb|AF498521.1| Zea mays cultivar C_9 hydroxymethyltransferase-like protein gene, 3'UTR and partial cds Length = 375 Score = 188 bits (95), Expect = 1e-44 Identities = 140/155 (90%) Strand = Plus / Plus Query: 240 ctactccttgtacttcatgctctcgagcgtgaagccgggcatgtcaaaggagagggcaaa 299 |||||||||||| ||||||||||| |||||||| || |||||||| |||||| |||||| Sbjct: 221 ctactccttgtatttcatgctctcaagcgtgaacccaggcatgtcgaaggagtcggcaaa 280 Query: 300 cttctcgacctcgaccttgaggttctcaatgtccttgttgttcaccaggcccttggagaa 359 |||||| |||| ||||||||||||||| ||||||||||||||||||||||||||| ||| Sbjct: 281 cttctccacctggaccttgaggttctcgatgtccttgttgttcaccaggcccttgttgaa 340 Query: 360 gtccttgagcagcttcccgtgctccttctggatgt 394 ||||||||| ||||| |||| |||||||||||||| Sbjct: 341 gtccttgaggagcttgccgtactccttctggatgt 375
>gb|AF498520.1| Zea mays cultivar F_7 hydroxymethyltransferase-like protein gene, 3'UTR and partial cds Length = 374 Score = 188 bits (95), Expect = 1e-44 Identities = 140/155 (90%) Strand = Plus / Plus Query: 240 ctactccttgtacttcatgctctcgagcgtgaagccgggcatgtcaaaggagagggcaaa 299 |||||||||||| ||||||||||| |||||||| || |||||||| |||||| |||||| Sbjct: 220 ctactccttgtatttcatgctctcaagcgtgaacccaggcatgtcgaaggagtcggcaaa 279 Query: 300 cttctcgacctcgaccttgaggttctcaatgtccttgttgttcaccaggcccttggagaa 359 |||||| |||| ||||||||||||||| ||||||||||||||||||||||||||| ||| Sbjct: 280 cttctccacctggaccttgaggttctcgatgtccttgttgttcaccaggcccttgttgaa 339 Query: 360 gtccttgagcagcttcccgtgctccttctggatgt 394 ||||||||| ||||| |||| |||||||||||||| Sbjct: 340 gtccttgaggagcttgccgtactccttctggatgt 374
>gb|AF498519.1| Zea mays cultivar D_9 hydroxymethyltransferase-like protein gene, 3'UTR and partial cds Length = 375 Score = 188 bits (95), Expect = 1e-44 Identities = 140/155 (90%) Strand = Plus / Plus Query: 240 ctactccttgtacttcatgctctcgagcgtgaagccgggcatgtcaaaggagagggcaaa 299 |||||||||||| ||||||||||| |||||||| || |||||||| |||||| |||||| Sbjct: 221 ctactccttgtatttcatgctctcaagcgtgaacccaggcatgtcgaaggagtcggcaaa 280 Query: 300 cttctcgacctcgaccttgaggttctcaatgtccttgttgttcaccaggcccttggagaa 359 |||||| |||| ||||||||||||||| ||||||||||||||||||||||||||| ||| Sbjct: 281 cttctccacctggaccttgaggttctcgatgtccttgttgttcaccaggcccttgttgaa 340 Query: 360 gtccttgagcagcttcccgtgctccttctggatgt 394 ||||||||| ||||| |||| |||||||||||||| Sbjct: 341 gtccttgaggagcttgccgtactccttctggatgt 375
>gb|AF498518.1| Zea mays cultivar D_6 hydroxymethyltransferase-like protein gene, 3'UTR and partial cds Length = 375 Score = 188 bits (95), Expect = 1e-44 Identities = 140/155 (90%) Strand = Plus / Plus Query: 240 ctactccttgtacttcatgctctcgagcgtgaagccgggcatgtcaaaggagagggcaaa 299 |||||||||||| ||||||||||| |||||||| || |||||||| |||||| |||||| Sbjct: 221 ctactccttgtatttcatgctctcaagcgtgaacccaggcatgtcgaaggagtcggcaaa 280 Query: 300 cttctcgacctcgaccttgaggttctcaatgtccttgttgttcaccaggcccttggagaa 359 |||||| |||| ||||||||||||||| ||||||||||||||||||||||||||| ||| Sbjct: 281 cttctccacctggaccttgaggttctcgatgtccttgttgttcaccaggcccttgttgaa 340 Query: 360 gtccttgagcagcttcccgtgctccttctggatgt 394 ||||||||| ||||| |||| |||||||||||||| Sbjct: 341 gtccttgaggagcttgccgtactccttctggatgt 375
>gb|AF498517.1| Zea mays cultivar F_1 hydroxymethyltransferase-like protein gene, 3'UTR and partial cds Length = 375 Score = 188 bits (95), Expect = 1e-44 Identities = 140/155 (90%) Strand = Plus / Plus Query: 240 ctactccttgtacttcatgctctcgagcgtgaagccgggcatgtcaaaggagagggcaaa 299 |||||||||||| ||||||||||| |||||||| || |||||||| |||||| |||||| Sbjct: 221 ctactccttgtatttcatgctctcaagcgtgaacccaggcatgtcgaaggagtcggcaaa 280 Query: 300 cttctcgacctcgaccttgaggttctcaatgtccttgttgttcaccaggcccttggagaa 359 |||||| |||| ||||||||||||||| ||||||||||||||||||||||||||| ||| Sbjct: 281 cttctccacctggaccttgaggttctcgatgtccttgttgttcaccaggcccttgttgaa 340 Query: 360 gtccttgagcagcttcccgtgctccttctggatgt 394 ||||||||| ||||| |||| |||||||||||||| Sbjct: 341 gtccttgaggagcttgccgtactccttctggatgt 375
>gb|AF498516.1| Zea mays cultivar Mo17 hydroxymethyltransferase-like protein gene, 3'UTR and partial cds Length = 374 Score = 188 bits (95), Expect = 1e-44 Identities = 140/155 (90%) Strand = Plus / Plus Query: 240 ctactccttgtacttcatgctctcgagcgtgaagccgggcatgtcaaaggagagggcaaa 299 |||||||||||| ||||||||||| |||||||| || |||||||| |||||| |||||| Sbjct: 220 ctactccttgtatttcatgctctcaagcgtgaacccaggcatgtcgaaggagtcggcaaa 279 Query: 300 cttctcgacctcgaccttgaggttctcaatgtccttgttgttcaccaggcccttggagaa 359 |||||| |||| ||||||||||||||| ||||||||||||||||||||||||||| ||| Sbjct: 280 cttctccacctggaccttgaggttctcgatgtccttgttgttcaccaggcccttgttgaa 339 Query: 360 gtccttgagcagcttcccgtgctccttctggatgt 394 ||||||||| ||||| |||| |||||||||||||| Sbjct: 340 gtccttgaggagcttgccgtactccttctggatgt 374
>gb|AF498515.1| Zea mays cultivar D_7 hydroxymethyltransferase-like protein gene, 3'UTR and partial cds Length = 369 Score = 188 bits (95), Expect = 1e-44 Identities = 140/155 (90%) Strand = Plus / Plus Query: 240 ctactccttgtacttcatgctctcgagcgtgaagccgggcatgtcaaaggagagggcaaa 299 |||||||||||| ||||||||||| |||||||| || |||||||| |||||| |||||| Sbjct: 215 ctactccttgtatttcatgctctcaagcgtgaacccaggcatgtcgaaggagtcggcaaa 274 Query: 300 cttctcgacctcgaccttgaggttctcaatgtccttgttgttcaccaggcccttggagaa 359 |||||| |||| ||||||||||||||| ||||||||||||||||||||||||||| ||| Sbjct: 275 cttctccacctggaccttgaggttctcgatgtccttgttgttcaccaggcccttgttgaa 334 Query: 360 gtccttgagcagcttcccgtgctccttctggatgt 394 ||||||||| ||||| |||| |||||||||||||| Sbjct: 335 gtccttgaggagcttgccgtactccttctggatgt 369
>gb|AF498514.1| Zea mays cultivar Wf9Ht hydroxymethyltransferase-like protein gene, 3'UTR and partial cds Length = 376 Score = 188 bits (95), Expect = 1e-44 Identities = 140/155 (90%) Strand = Plus / Plus Query: 240 ctactccttgtacttcatgctctcgagcgtgaagccgggcatgtcaaaggagagggcaaa 299 |||||||||||| ||||||||||| |||||||| || |||||||| |||||| |||||| Sbjct: 222 ctactccttgtatttcatgctctcaagcgtgaacccaggcatgtcgaaggagtcggcaaa 281 Query: 300 cttctcgacctcgaccttgaggttctcaatgtccttgttgttcaccaggcccttggagaa 359 |||||| |||| ||||||||||||||| ||||||||||||||||||||||||||| ||| Sbjct: 282 cttctccacctggaccttgaggttctcgatgtccttgttgttcaccaggcccttgttgaa 341 Query: 360 gtccttgagcagcttcccgtgctccttctggatgt 394 ||||||||| ||||| |||| |||||||||||||| Sbjct: 342 gtccttgaggagcttgccgtactccttctggatgt 376
>gb|AF498510.1| Zea mays cultivar H60 hydroxymethyltransferase-like protein gene, 3'UTR and partial cds Length = 369 Score = 188 bits (95), Expect = 1e-44 Identities = 140/155 (90%) Strand = Plus / Plus Query: 240 ctactccttgtacttcatgctctcgagcgtgaagccgggcatgtcaaaggagagggcaaa 299 |||||||||||| ||||||||||| |||||||| || |||||||| |||||| |||||| Sbjct: 215 ctactccttgtatttcatgctctcaagcgtgaacccaggcatgtcgaaggagtcggcaaa 274 Query: 300 cttctcgacctcgaccttgaggttctcaatgtccttgttgttcaccaggcccttggagaa 359 |||||| |||| ||||||||||||||| ||||||||||||||||||||||||||| ||| Sbjct: 275 cttctccacctggaccttgaggttctcgatgtccttgttgttcaccaggcccttgttgaa 334 Query: 360 gtccttgagcagcttcccgtgctccttctggatgt 394 ||||||||| ||||| |||| |||||||||||||| Sbjct: 335 gtccttgaggagcttgccgtactccttctggatgt 369
>gb|AF498508.1| Zea mays cultivar 684 hydroxymethyltransferase-like protein gene, 3'UTR and partial cds Length = 376 Score = 188 bits (95), Expect = 1e-44 Identities = 140/155 (90%) Strand = Plus / Plus Query: 240 ctactccttgtacttcatgctctcgagcgtgaagccgggcatgtcaaaggagagggcaaa 299 |||||||||||| ||||||||||| |||||||| || |||||||| |||||| |||||| Sbjct: 222 ctactccttgtatttcatgctctcaagcgtgaacccaggcatgtcgaaggagtcggcaaa 281 Query: 300 cttctcgacctcgaccttgaggttctcaatgtccttgttgttcaccaggcccttggagaa 359 |||||| |||| ||||||||||||||| ||||||||||||||||||||||||||| ||| Sbjct: 282 cttctccacctggaccttgaggttctcgatgtccttgttgttcaccaggcccttgttgaa 341 Query: 360 gtccttgagcagcttcccgtgctccttctggatgt 394 ||||||||| ||||| |||| |||||||||||||| Sbjct: 342 gtccttgaggagcttgccgtactccttctggatgt 376
>gb|AF498507.1| Zea mays cultivar D71-4HT hydroxymethyltransferase-like protein gene, 3'UTR and partial cds Length = 366 Score = 188 bits (95), Expect = 1e-44 Identities = 140/155 (90%) Strand = Plus / Plus Query: 240 ctactccttgtacttcatgctctcgagcgtgaagccgggcatgtcaaaggagagggcaaa 299 |||||||||||| ||||||||||| |||||||| || |||||||| |||||| |||||| Sbjct: 212 ctactccttgtatttcatgctctcaagcgtgaacccaggcatgtcgaaggagtcggcaaa 271 Query: 300 cttctcgacctcgaccttgaggttctcaatgtccttgttgttcaccaggcccttggagaa 359 |||||| |||| ||||||||||||||| ||||||||||||||||||||||||||| ||| Sbjct: 272 cttctccacctggaccttgaggttctcgatgtccttgttgttcaccaggcccttgttgaa 331 Query: 360 gtccttgagcagcttcccgtgctccttctggatgt 394 ||||||||| ||||| |||| |||||||||||||| Sbjct: 332 gtccttgaggagcttgccgtactccttctggatgt 366
>gb|AF498506.1| Zea mays cultivar H99 hydroxymethyltransferase-like protein gene, 3'UTR and partial cds Length = 371 Score = 188 bits (95), Expect = 1e-44 Identities = 140/155 (90%) Strand = Plus / Plus Query: 240 ctactccttgtacttcatgctctcgagcgtgaagccgggcatgtcaaaggagagggcaaa 299 |||||||||||| ||||||||||| |||||||| || |||||||| |||||| |||||| Sbjct: 217 ctactccttgtatttcatgctctcaagcgtgaacccaggcatgtcgaaggagtcggcaaa 276 Query: 300 cttctcgacctcgaccttgaggttctcaatgtccttgttgttcaccaggcccttggagaa 359 |||||| |||| ||||||||||||||| ||||||||||||||||||||||||||| ||| Sbjct: 277 cttctccacctggaccttgaggttctcgatgtccttgttgttcaccaggcccttgttgaa 336 Query: 360 gtccttgagcagcttcccgtgctccttctggatgt 394 ||||||||| ||||| |||| |||||||||||||| Sbjct: 337 gtccttgaggagcttgccgtactccttctggatgt 371
>gb|AF498505.1| Zea mays cultivar CO109 hydroxymethyltransferase-like protein gene, 3'UTR and partial cds Length = 371 Score = 188 bits (95), Expect = 1e-44 Identities = 140/155 (90%) Strand = Plus / Plus Query: 240 ctactccttgtacttcatgctctcgagcgtgaagccgggcatgtcaaaggagagggcaaa 299 |||||||||||| ||||||||||| |||||||| || |||||||| |||||| |||||| Sbjct: 217 ctactccttgtatttcatgctctcaagcgtgaacccaggcatgtcgaaggagtcggcaaa 276 Query: 300 cttctcgacctcgaccttgaggttctcaatgtccttgttgttcaccaggcccttggagaa 359 |||||| |||| ||||||||||||||| ||||||||||||||||||||||||||| ||| Sbjct: 277 cttctccacctggaccttgaggttctcgatgtccttgttgttcaccaggcccttgttgaa 336 Query: 360 gtccttgagcagcttcccgtgctccttctggatgt 394 ||||||||| ||||| |||| |||||||||||||| Sbjct: 337 gtccttgaggagcttgccgtactccttctggatgt 371
>gb|AF498504.1| Zea mays cultivar I_1 hydroxymethyltransferase-like protein gene, 3'UTR and partial cds Length = 375 Score = 188 bits (95), Expect = 1e-44 Identities = 140/155 (90%) Strand = Plus / Plus Query: 240 ctactccttgtacttcatgctctcgagcgtgaagccgggcatgtcaaaggagagggcaaa 299 |||||||||||| ||||||||||| |||||||| || |||||||| |||||| |||||| Sbjct: 221 ctactccttgtatttcatgctctcaagcgtgaacccaggcatgtcgaaggagtcggcaaa 280 Query: 300 cttctcgacctcgaccttgaggttctcaatgtccttgttgttcaccaggcccttggagaa 359 |||||| |||| ||||||||||||||| ||||||||||||||||||||||||||| ||| Sbjct: 281 cttctccacctggaccttgaggttctcgatgtccttgttgttcaccaggcccttgttgaa 340 Query: 360 gtccttgagcagcttcccgtgctccttctggatgt 394 ||||||||| ||||| |||| |||||||||||||| Sbjct: 341 gtccttgaggagcttgccgtactccttctggatgt 375
>gb|AF498503.1| Zea mays cultivar B73 hydroxymethyltransferase-like protein gene, 3'UTR and partial cds Length = 376 Score = 188 bits (95), Expect = 1e-44 Identities = 140/155 (90%) Strand = Plus / Plus Query: 240 ctactccttgtacttcatgctctcgagcgtgaagccgggcatgtcaaaggagagggcaaa 299 |||||||||||| ||||||||||| |||||||| || |||||||| |||||| |||||| Sbjct: 222 ctactccttgtatttcatgctctcaagcgtgaacccaggcatgtcgaaggagtcggcaaa 281 Query: 300 cttctcgacctcgaccttgaggttctcaatgtccttgttgttcaccaggcccttggagaa 359 |||||| |||| ||||||||||||||| ||||||||||||||||||||||||||| ||| Sbjct: 282 cttctccacctggaccttgaggttctcgatgtccttgttgttcaccaggcccttgttgaa 341 Query: 360 gtccttgagcagcttcccgtgctccttctggatgt 394 ||||||||| ||||| |||| |||||||||||||| Sbjct: 342 gtccttgaggagcttgccgtactccttctggatgt 376
>gb|AF498502.1| Zea mays cultivar F_2 hydroxymethyltransferase-like protein gene, 3'UTR and partial cds Length = 376 Score = 188 bits (95), Expect = 1e-44 Identities = 140/155 (90%) Strand = Plus / Plus Query: 240 ctactccttgtacttcatgctctcgagcgtgaagccgggcatgtcaaaggagagggcaaa 299 |||||||||||| ||||||||||| |||||||| || |||||||| |||||| |||||| Sbjct: 222 ctactccttgtatttcatgctctcaagcgtgaacccaggcatgtcgaaggagtcggcaaa 281 Query: 300 cttctcgacctcgaccttgaggttctcaatgtccttgttgttcaccaggcccttggagaa 359 |||||| |||| ||||||||||||||| ||||||||||||||||||||||||||| ||| Sbjct: 282 cttctccacctggaccttgaggttctcgatgtccttgttgttcaccaggcccttgttgaa 341 Query: 360 gtccttgagcagcttcccgtgctccttctggatgt 394 ||||||||| ||||| |||| |||||||||||||| Sbjct: 342 gtccttgaggagcttgccgtactccttctggatgt 376
>gb|AF498501.1| Zea mays cultivar G_1 hydroxymethyltransferase-like protein gene, 3'UTR and partial cds Length = 372 Score = 188 bits (95), Expect = 1e-44 Identities = 140/155 (90%) Strand = Plus / Plus Query: 240 ctactccttgtacttcatgctctcgagcgtgaagccgggcatgtcaaaggagagggcaaa 299 |||||||||||| ||||||||||| |||||||| || |||||||| |||||| |||||| Sbjct: 218 ctactccttgtatttcatgctctcaagcgtgaacccaggcatgtcgaaggagtcggcaaa 277 Query: 300 cttctcgacctcgaccttgaggttctcaatgtccttgttgttcaccaggcccttggagaa 359 |||||| |||| ||||||||||||||| ||||||||||||||||||||||||||| ||| Sbjct: 278 cttctccacctggaccttgaggttctcgatgtccttgttgttcaccaggcccttgttgaa 337 Query: 360 gtccttgagcagcttcccgtgctccttctggatgt 394 ||||||||| ||||| |||| |||||||||||||| Sbjct: 338 gtccttgaggagcttgccgtactccttctggatgt 372
>gb|AF498500.1| Zea mays cultivar B_6 hydroxymethyltransferase-like protein gene, 3'UTR and partial cds Length = 374 Score = 188 bits (95), Expect = 1e-44 Identities = 140/155 (90%) Strand = Plus / Plus Query: 240 ctactccttgtacttcatgctctcgagcgtgaagccgggcatgtcaaaggagagggcaaa 299 |||||||||||| ||||||||||| |||||||| || |||||||| |||||| |||||| Sbjct: 220 ctactccttgtatttcatgctctcaagcgtgaacccaggcatgtcgaaggagtcggcaaa 279 Query: 300 cttctcgacctcgaccttgaggttctcaatgtccttgttgttcaccaggcccttggagaa 359 |||||| |||| ||||||||||||||| ||||||||||||||||||||||||||| ||| Sbjct: 280 cttctccacctggaccttgaggttctcgatgtccttgttgttcaccaggcccttgttgaa 339 Query: 360 gtccttgagcagcttcccgtgctccttctggatgt 394 ||||||||| ||||| |||| |||||||||||||| Sbjct: 340 gtccttgaggagcttgccgtactccttctggatgt 374
>gb|AF498499.1| Zea mays cultivar H_4 hydroxymethyltransferase-like protein gene, 3'UTR and partial cds Length = 369 Score = 188 bits (95), Expect = 1e-44 Identities = 140/155 (90%) Strand = Plus / Plus Query: 240 ctactccttgtacttcatgctctcgagcgtgaagccgggcatgtcaaaggagagggcaaa 299 |||||||||||| ||||||||||| |||||||| || |||||||| |||||| |||||| Sbjct: 215 ctactccttgtatttcatgctctcaagcgtgaacccaggcatgtcgaaggagtcggcaaa 274 Query: 300 cttctcgacctcgaccttgaggttctcaatgtccttgttgttcaccaggcccttggagaa 359 |||||| |||| ||||||||||||||| ||||||||||||||||||||||||||| ||| Sbjct: 275 cttctccacctggaccttgaggttctcgatgtccttgttgttcaccaggcccttgttgaa 334 Query: 360 gtccttgagcagcttcccgtgctccttctggatgt 394 ||||||||| ||||| |||| |||||||||||||| Sbjct: 335 gtccttgaggagcttgccgtactccttctggatgt 369
>gb|AF498498.1| Zea mays cultivar F_4 hydroxymethyltransferase-like protein gene, 3'UTR and partial cds Length = 375 Score = 188 bits (95), Expect = 1e-44 Identities = 140/155 (90%) Strand = Plus / Plus Query: 240 ctactccttgtacttcatgctctcgagcgtgaagccgggcatgtcaaaggagagggcaaa 299 |||||||||||| ||||||||||| |||||||| || |||||||| |||||| |||||| Sbjct: 221 ctactccttgtatttcatgctctcaagcgtgaacccaggcatgtcgaaggagtcggcaaa 280 Query: 300 cttctcgacctcgaccttgaggttctcaatgtccttgttgttcaccaggcccttggagaa 359 |||||| |||| ||||||||||||||| ||||||||||||||||||||||||||| ||| Sbjct: 281 cttctccacctggaccttgaggttctcgatgtccttgttgttcaccaggcccttgttgaa 340 Query: 360 gtccttgagcagcttcccgtgctccttctggatgt 394 ||||||||| ||||| |||| |||||||||||||| Sbjct: 341 gtccttgaggagcttgccgtactccttctggatgt 375
>gb|AF498497.1| Zea mays cultivar F_3 hydroxymethyltransferase-like protein gene, 3'UTR and partial cds Length = 376 Score = 188 bits (95), Expect = 1e-44 Identities = 140/155 (90%) Strand = Plus / Plus Query: 240 ctactccttgtacttcatgctctcgagcgtgaagccgggcatgtcaaaggagagggcaaa 299 |||||||||||| ||||||||||| |||||||| || |||||||| |||||| |||||| Sbjct: 222 ctactccttgtatttcatgctctcaagcgtgaacccaggcatgtcgaaggagtcggcaaa 281 Query: 300 cttctcgacctcgaccttgaggttctcaatgtccttgttgttcaccaggcccttggagaa 359 |||||| |||| ||||||||||||||| ||||||||||||||||||||||||||| ||| Sbjct: 282 cttctccacctggaccttgaggttctcgatgtccttgttgttcaccaggcccttgttgaa 341 Query: 360 gtccttgagcagcttcccgtgctccttctggatgt 394 ||||||||| ||||| |||| |||||||||||||| Sbjct: 342 gtccttgaggagcttgccgtactccttctggatgt 376
>gb|AF498496.1| Zea mays cultivar F_5 hydroxymethyltransferase-like protein gene, 3'UTR and partial cds Length = 373 Score = 188 bits (95), Expect = 1e-44 Identities = 140/155 (90%) Strand = Plus / Plus Query: 240 ctactccttgtacttcatgctctcgagcgtgaagccgggcatgtcaaaggagagggcaaa 299 |||||||||||| ||||||||||| |||||||| || |||||||| |||||| |||||| Sbjct: 219 ctactccttgtatttcatgctctcaagcgtgaacccaggcatgtcgaaggagtcggcaaa 278 Query: 300 cttctcgacctcgaccttgaggttctcaatgtccttgttgttcaccaggcccttggagaa 359 |||||| |||| ||||||||||||||| ||||||||||||||||||||||||||| ||| Sbjct: 279 cttctccacctggaccttgaggttctcgatgtccttgttgttcaccaggcccttgttgaa 338 Query: 360 gtccttgagcagcttcccgtgctccttctggatgt 394 ||||||||| ||||| |||| |||||||||||||| Sbjct: 339 gtccttgaggagcttgccgtactccttctggatgt 373
>gb|AF498495.1| Zea mays cultivar H_5 hydroxymethyltransferase-like protein gene, 3'UTR and partial cds Length = 374 Score = 188 bits (95), Expect = 1e-44 Identities = 140/155 (90%) Strand = Plus / Plus Query: 240 ctactccttgtacttcatgctctcgagcgtgaagccgggcatgtcaaaggagagggcaaa 299 |||||||||||| ||||||||||| |||||||| || |||||||| |||||| |||||| Sbjct: 220 ctactccttgtatttcatgctctcaagcgtgaacccaggcatgtcgaaggagtcggcaaa 279 Query: 300 cttctcgacctcgaccttgaggttctcaatgtccttgttgttcaccaggcccttggagaa 359 |||||| |||| ||||||||||||||| ||||||||||||||||||||||||||| ||| Sbjct: 280 cttctccacctggaccttgaggttctcgatgtccttgttgttcaccaggcccttgttgaa 339 Query: 360 gtccttgagcagcttcccgtgctccttctggatgt 394 ||||||||| ||||| |||| |||||||||||||| Sbjct: 340 gtccttgaggagcttgccgtactccttctggatgt 374
>gb|AF498492.1| Zea mays cultivar 647 hydroxymethyltransferase-like protein gene, 3'UTR and partial cds Length = 366 Score = 188 bits (95), Expect = 1e-44 Identities = 140/155 (90%) Strand = Plus / Plus Query: 240 ctactccttgtacttcatgctctcgagcgtgaagccgggcatgtcaaaggagagggcaaa 299 |||||||||||| ||||||||||| |||||||| || |||||||| |||||| |||||| Sbjct: 212 ctactccttgtatttcatgctctcaagcgtgaacccaggcatgtcgaaggagtcggcaaa 271 Query: 300 cttctcgacctcgaccttgaggttctcaatgtccttgttgttcaccaggcccttggagaa 359 |||||| |||| ||||||||||||||| ||||||||||||||||||||||||||| ||| Sbjct: 272 cttctccacctggaccttgaggttctcgatgtccttgttgttcaccaggcccttgttgaa 331 Query: 360 gtccttgagcagcttcccgtgctccttctggatgt 394 ||||||||| ||||| |||| |||||||||||||| Sbjct: 332 gtccttgaggagcttgccgtactccttctggatgt 366
>gb|AF498511.1| Zea mays cultivar B84 hydroxymethyltransferase-like protein gene, 3'UTR and partial cds Length = 376 Score = 182 bits (92), Expect = 9e-43 Identities = 139/155 (89%) Strand = Plus / Plus Query: 240 ctactccttgtacttcatgctctcgagcgtgaagccgggcatgtcaaaggagagggcaaa 299 |||||||||||| ||||||||||| |||||||| || |||||||| |||||| |||||| Sbjct: 222 ctactccttgtatttcatgctctcaagcgtgaacccaggcatgtcgaaggagtcggcaaa 281 Query: 300 cttctcgacctcgaccttgaggttctcaatgtccttgttgttcaccaggcccttggagaa 359 |||||| |||| ||||||||||||||| ||||||||||||||||||| ||||||| ||| Sbjct: 282 cttctccacctggaccttgaggttctcgatgtccttgttgttcaccangcccttgttgaa 341 Query: 360 gtccttgagcagcttcccgtgctccttctggatgt 394 ||||||||| ||||| |||| |||||||||||||| Sbjct: 342 gtccttgaggagcttgccgtactccttctggatgt 376
>gb|AY106587.1| Zea mays PCO066539 mRNA sequence Length = 603 Score = 167 bits (84), Expect = 5e-38 Identities = 195/232 (84%) Strand = Plus / Minus Query: 269 tgaagccgggcatgtcaaaggagagggcaaacttctcgacctcgaccttgaggttctcaa 328 ||||||| ||||||||||| || ||| |||||||||||||| || | |||||||| | Sbjct: 246 tgaagccaggcatgtcaaatgaagtggcgaacttctcgacctccgccctcaggttctcta 187 Query: 329 tgtccttgttgttcaccaggcccttggagaagtccttgagcagcttcccgtgctccttct 388 |||||||||| | ||||| |||||| |||||||||||| | ||| || |||||| || Sbjct: 186 tgtccttgttttgcaccaagcccttcttgaagtccttgagaatcttgccatgctccgcct 127 Query: 389 ggatgttcaggcagatggtcactgcctggtggaggaactcggcgatctgctcgaagtcct 448 ||||| ||| |||||||||||| || |||| ||| ||||||| |||||| ||||||||| Sbjct: 126 ggatgctcaagcagatggtcacagctcggtgaaggtactcggcaatctgcacgaagtcct 67 Query: 449 tctcaaccagacccctggaggtcatagcaggagcaccaatgcggacaccacc 500 ||||||||| |||||| |||||||||||||| | ||||||||| |||||||| Sbjct: 66 tctcaaccaaaccccttgaggtcatagcaggtgtaccaatgcgcacaccacc 15
>gb|DQ175859.1| Hordeum vulgare clone DsC31 Ds insertion site flanking region genomic sequence Length = 659 Score = 165 bits (83), Expect = 2e-37 Identities = 122/135 (90%) Strand = Plus / Plus Query: 351 cttggagaagtccttgagcagcttcccgtgctccttctggatgttcaggcagatggtcac 410 |||||||||||||||||||||||| ||||||||||||||||| |||| |||||| ||||| Sbjct: 511 cttggagaagtccttgagcagcttgccgtgctccttctggattttcaagcagatcgtcac 570 Query: 411 tgcctggtggaggaactcggcgatctgctcgaagtccttctcaaccagacccctggaggt 470 |||||||||||||||||||| ||||||||||| || ||||| ||||||||||| || || Sbjct: 571 agcctggtggaggaactcggcaatctgctcgaaatctttctcgaccagaccccttgaagt 630 Query: 471 catagcaggagcacc 485 ||| || |||||||| Sbjct: 631 cattgctggagcacc 645
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 139 bits (70), Expect = 1e-29 Identities = 157/186 (84%) Strand = Plus / Plus Query: 294 ggcaaacttctcgacctcgaccttgaggttctcaatgtccttgttgttcaccaggccctt 353 |||||||||||| ||||| || |||||| ||||||||||||||||||| ||||||||| Sbjct: 12437386 ggcaaacttctccacctccgccctgaggtcctcaatgtccttgttgttctccaggccctc 12437445 Query: 354 ggagaagtccttgagcagcttcccgtgctccttctggatgttcaggcagatggtcactgc 413 | ||||| |||||| ||||| || |||||||||| | | || ||||||||||||||| Sbjct: 12437446 gttgaagtacttgagaagcttgccacgctccttctgaacatccaagcagatggtcactgc 12437505 Query: 414 ctggtggaggaactcggcgatctgctcgaagtccttctcaaccagacccctggaggtcat 473 |||||| ||||||||||||||||| | ||||||| ||| |||| |||||| || ||||| Sbjct: 12437506 ctggtgaaggaactcggcgatctgtacaaagtcctcctctaccaaaccccttgatgtcat 12437565 Query: 474 agcagg 479 ||||| Sbjct: 12437566 ggcagg 12437571 Score = 79.8 bits (40), Expect = 1e-11 Identities = 64/72 (88%) Strand = Plus / Plus Query: 483 accaatgcggacaccacccggggacaatgcactgctgtcaccgaagacagcattcttgtt 542 |||||||||||||||||| || |||| ||||||||| || || ||||||||||| ||||| Sbjct: 12438434 accaatgcggacaccaccaggtgacattgcactgctatccccaaagacagcatttttgtt 12438493 Query: 543 caatgtaatgct 554 || ||||||||| Sbjct: 12438494 cagtgtaatgct 12438505 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 586 ccagtcaagccaagagggcggagatcccatagaa 619 |||||||||||||||||||| |||||||| |||| Sbjct: 12438618 ccagtcaagccaagagggcgcagatcccagagaa 12438651
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 139 bits (70), Expect = 1e-29 Identities = 157/186 (84%) Strand = Plus / Plus Query: 294 ggcaaacttctcgacctcgaccttgaggttctcaatgtccttgttgttcaccaggccctt 353 |||||||||||| ||||| || |||||| ||||||||||||||||||| ||||||||| Sbjct: 12391756 ggcaaacttctccacctccgccctgaggtcctcaatgtccttgttgttctccaggccctc 12391815 Query: 354 ggagaagtccttgagcagcttcccgtgctccttctggatgttcaggcagatggtcactgc 413 | ||||| |||||| ||||| || |||||||||| | | || ||||||||||||||| Sbjct: 12391816 gttgaagtacttgagaagcttgccacgctccttctgaacatccaagcagatggtcactgc 12391875 Query: 414 ctggtggaggaactcggcgatctgctcgaagtccttctcaaccagacccctggaggtcat 473 |||||| ||||||||||||||||| | ||||||| ||| |||| |||||| || ||||| Sbjct: 12391876 ctggtgaaggaactcggcgatctgtacaaagtcctcctctaccaaaccccttgatgtcat 12391935 Query: 474 agcagg 479 ||||| Sbjct: 12391936 ggcagg 12391941 Score = 79.8 bits (40), Expect = 1e-11 Identities = 64/72 (88%) Strand = Plus / Plus Query: 483 accaatgcggacaccacccggggacaatgcactgctgtcaccgaagacagcattcttgtt 542 |||||||||||||||||| || |||| ||||||||| || || ||||||||||| ||||| Sbjct: 12392804 accaatgcggacaccaccaggtgacattgcactgctatccccaaagacagcatttttgtt 12392863 Query: 543 caatgtaatgct 554 || ||||||||| Sbjct: 12392864 cagtgtaatgct 12392875 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 586 ccagtcaagccaagagggcggagatcccatagaa 619 |||||||||||||||||||| |||||||| |||| Sbjct: 12392988 ccagtcaagccaagagggcgcagatcccagagaa 12393021
>emb|AL713942.4|CNS07YPB Oryza sativa chromosome 12, . BAC OSJNBa0009F05 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 163702 Score = 139 bits (70), Expect = 1e-29 Identities = 157/186 (84%) Strand = Plus / Plus Query: 294 ggcaaacttctcgacctcgaccttgaggttctcaatgtccttgttgttcaccaggccctt 353 |||||||||||| ||||| || |||||| ||||||||||||||||||| ||||||||| Sbjct: 151751 ggcaaacttctccacctccgccctgaggtcctcaatgtccttgttgttctccaggccctc 151810 Query: 354 ggagaagtccttgagcagcttcccgtgctccttctggatgttcaggcagatggtcactgc 413 | ||||| |||||| ||||| || |||||||||| | | || ||||||||||||||| Sbjct: 151811 gttgaagtacttgagaagcttgccacgctccttctgaacatccaagcagatggtcactgc 151870 Query: 414 ctggtggaggaactcggcgatctgctcgaagtccttctcaaccagacccctggaggtcat 473 |||||| ||||||||||||||||| | ||||||| ||| |||| |||||| || ||||| Sbjct: 151871 ctggtgaaggaactcggcgatctgtacaaagtcctcctctaccaaaccccttgatgtcat 151930 Query: 474 agcagg 479 ||||| Sbjct: 151931 ggcagg 151936 Score = 79.8 bits (40), Expect = 1e-11 Identities = 64/72 (88%) Strand = Plus / Plus Query: 483 accaatgcggacaccacccggggacaatgcactgctgtcaccgaagacagcattcttgtt 542 |||||||||||||||||| || |||| ||||||||| || || ||||||||||| ||||| Sbjct: 152799 accaatgcggacaccaccaggtgacattgcactgctatccccaaagacagcatttttgtt 152858 Query: 543 caatgtaatgct 554 || ||||||||| Sbjct: 152859 cagtgtaatgct 152870 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 586 ccagtcaagccaagagggcggagatcccatagaa 619 |||||||||||||||||||| |||||||| |||| Sbjct: 152983 ccagtcaagccaagagggcgcagatcccagagaa 153016
>emb|AL954826.3|CNS08CD2 Oryza sativa chromosome 12, . BAC OSJNBb0080P14 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132241 Score = 139 bits (70), Expect = 1e-29 Identities = 157/186 (84%) Strand = Plus / Plus Query: 294 ggcaaacttctcgacctcgaccttgaggttctcaatgtccttgttgttcaccaggccctt 353 |||||||||||| ||||| || |||||| ||||||||||||||||||| ||||||||| Sbjct: 38864 ggcaaacttctccacctccgccctgaggtcctcaatgtccttgttgttctccaggccctc 38923 Query: 354 ggagaagtccttgagcagcttcccgtgctccttctggatgttcaggcagatggtcactgc 413 | ||||| |||||| ||||| || |||||||||| | | || ||||||||||||||| Sbjct: 38924 gttgaagtacttgagaagcttgccacgctccttctgaacatccaagcagatggtcactgc 38983 Query: 414 ctggtggaggaactcggcgatctgctcgaagtccttctcaaccagacccctggaggtcat 473 |||||| ||||||||||||||||| | ||||||| ||| |||| |||||| || ||||| Sbjct: 38984 ctggtgaaggaactcggcgatctgtacaaagtcctcctctaccaaaccccttgatgtcat 39043 Query: 474 agcagg 479 ||||| Sbjct: 39044 ggcagg 39049 Score = 79.8 bits (40), Expect = 1e-11 Identities = 64/72 (88%) Strand = Plus / Plus Query: 483 accaatgcggacaccacccggggacaatgcactgctgtcaccgaagacagcattcttgtt 542 |||||||||||||||||| || |||| ||||||||| || || ||||||||||| ||||| Sbjct: 39912 accaatgcggacaccaccaggtgacattgcactgctatccccaaagacagcatttttgtt 39971 Query: 543 caatgtaatgct 554 || ||||||||| Sbjct: 39972 cagtgtaatgct 39983 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 586 ccagtcaagccaagagggcggagatcccatagaa 619 |||||||||||||||||||| |||||||| |||| Sbjct: 40096 ccagtcaagccaagagggcgcagatcccagagaa 40129
>dbj|AB154528.1| Cucumis melo 6F11 mRNA for hypothetical protein, partial cds Length = 963 Score = 101 bits (51), Expect = 3e-18 Identities = 204/255 (80%) Strand = Plus / Minus Query: 270 gaagccgggcatgtcaaaggagagggcaaacttctcgacctcgaccttgaggttctcaat 329 |||||| |||||||| || ||| || ||| |||||||| || ||||||| | || || Sbjct: 944 gaagcctggcatgtcgaaagagccggaaaatttctcgacatcagccttgagctcttcgat 885 Query: 330 gtccttgttgttcaccaggcccttggagaagtccttgagcagcttcccgtgctccttctg 389 ||||||||||| || || |||||| ||||||||| | |||||| || | |||||||| Sbjct: 884 ttccttgttgtttacaagacccttgttgaagtccttcaacagctttccatattccttctg 825 Query: 390 gatgttcaggcagatggtcactgcctggtggaggaactcggcgatctgctcgaagtcctt 449 |||||||| | |||||| || || |||| |||||||| |||||||| |||||||| || Sbjct: 824 gatgttcaaggtgatggttacagcacggtgcaggaactccgcgatctgttcgaagtcttt 765 Query: 450 ctcaaccagacccctggaggtcatagcaggagcaccaatgcggacaccacccggggacaa 509 ||| |||| ||| || || ||||| ||||| ||||| || | |||||| || || | ||| Sbjct: 764 ctctaccaaacctcttgaagtcatggcaggtgcaccgattctgacacctccgggagtcaa 705 Query: 510 tgcactgctgtcacc 524 ||||||||||||||| Sbjct: 704 tgcactgctgtcacc 690
>gb|AY224189.1| Medicago truncatula adenosylhomocysteinase (AHC2) gene, complete cds Length = 68460 Score = 83.8 bits (42), Expect = 6e-13 Identities = 63/70 (90%) Strand = Plus / Plus Query: 416 ggtggaggaactcggcgatctgctcgaagtccttctcaaccagacccctggaggtcatag 475 |||| |||||||| || ||||||||||||||||||||||||| ||||||||| ||||||| Sbjct: 20906 ggtgaaggaactctgcaatctgctcgaagtccttctcaaccaaacccctggaagtcatag 20965 Query: 476 caggagcacc 485 | || ||||| Sbjct: 20966 ctggggcacc 20975 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 589 gtcaagccaagagggcggagatcccata 616 |||||||||||||||||||||||||||| Sbjct: 21419 gtcaagccaagagggcggagatcccata 21446 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 511 gcactgctgtcaccgaagacagcattcttgttcaatgtaatgctacaaaggtcaca 566 |||||||| ||||| || |||||||||||||||| |||||| |||| |||||||| Sbjct: 21256 gcactgctatcaccaaaaacagcattcttgttcacagtaatgttacagaggtcaca 21311
>ref|NM_117467.2| Arabidopsis thaliana SHM4 (SERINE HYDROXYMETHYLTRANSFERASE 4); glycine hydroxymethyltransferase AT4G13930 (SHM4) mRNA, complete cds Length = 1810 Score = 73.8 bits (37), Expect = 6e-10 Identities = 73/85 (85%) Strand = Plus / Minus Query: 535 ttcttgttcaatgtaatgctacaaaggtcacacatcttttcgaccttgtttccagtcaag 594 |||||||||||||||||||| || || || || | ||| || ||||||||||| ||||| Sbjct: 1206 ttcttgttcaatgtaatgctgcacagatcgcagagcttctcaaccttgtttccggtcaat 1147 Query: 595 ccaagagggcggagatcccatagaa 619 ||||||||||| |||||||| |||| Sbjct: 1146 ccaagagggcgaagatcccagagaa 1122
>gb|AY142551.1| Arabidopsis thaliana clone RAFL08-14-N15 (R11225) mRNA sequence Length = 3755 Score = 73.8 bits (37), Expect = 6e-10 Identities = 73/85 (85%) Strand = Plus / Minus Query: 535 ttcttgttcaatgtaatgctacaaaggtcacacatcttttcgaccttgtttccagtcaag 594 |||||||||||||||||||| || || || || | ||| || ||||||||||| ||||| Sbjct: 1191 ttcttgttcaatgtaatgctgcacagatcgcagagcttctcaaccttgtttccggtcaat 1132 Query: 595 ccaagagggcggagatcccatagaa 619 ||||||||||| |||||||| |||| Sbjct: 1131 ccaagagggcgaagatcccagagaa 1107
>gb|AY093987.1| Arabidopsis thaliana AT4g13930/dl3005c mRNA, complete cds Length = 1416 Score = 73.8 bits (37), Expect = 6e-10 Identities = 73/85 (85%) Strand = Plus / Minus Query: 535 ttcttgttcaatgtaatgctacaaaggtcacacatcttttcgaccttgtttccagtcaag 594 |||||||||||||||||||| || || || || | ||| || ||||||||||| ||||| Sbjct: 1121 ttcttgttcaatgtaatgctgcacagatcgcagagcttctcaaccttgtttccggtcaat 1062 Query: 595 ccaagagggcggagatcccatagaa 619 ||||||||||| |||||||| |||| Sbjct: 1061 ccaagagggcgaagatcccagagaa 1037
>gb|AF361589.1| Arabidopsis thaliana AT4g13930/dl3005c mRNA, complete cds Length = 1712 Score = 73.8 bits (37), Expect = 6e-10 Identities = 73/85 (85%) Strand = Plus / Minus Query: 535 ttcttgttcaatgtaatgctacaaaggtcacacatcttttcgaccttgtttccagtcaag 594 |||||||||||||||||||| || || || || | ||| || ||||||||||| ||||| Sbjct: 1184 ttcttgttcaatgtaatgctgcacagatcgcagagcttctcaaccttgtttccggtcaat 1125 Query: 595 ccaagagggcggagatcccatagaa 619 ||||||||||| |||||||| |||| Sbjct: 1124 ccaagagggcgaagatcccagagaa 1100
>gb|AF324991.2|AF324991 Arabidopsis thaliana AT4g13930 (AT4g13930/dl3005c) mRNA, complete cds Length = 1716 Score = 73.8 bits (37), Expect = 6e-10 Identities = 73/85 (85%) Strand = Plus / Minus Query: 535 ttcttgttcaatgtaatgctacaaaggtcacacatcttttcgaccttgtttccagtcaag 594 |||||||||||||||||||| || || || || | ||| || ||||||||||| ||||| Sbjct: 1188 ttcttgttcaatgtaatgctgcacagatcgcagagcttctcaaccttgtttccggtcaat 1129 Query: 595 ccaagagggcggagatcccatagaa 619 ||||||||||| |||||||| |||| Sbjct: 1128 ccaagagggcgaagatcccagagaa 1104
>emb|BX827403.1|CNS0A2GP Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS50ZE10 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1624 Score = 73.8 bits (37), Expect = 6e-10 Identities = 73/85 (85%) Strand = Plus / Minus Query: 535 ttcttgttcaatgtaatgctacaaaggtcacacatcttttcgaccttgtttccagtcaag 594 |||||||||||||||||||| || || || || | ||| || ||||||||||| ||||| Sbjct: 1179 ttcttgttcaatgtaatgctgcacagatcgcagagcttctcaaccttgtttccggtcaat 1120 Query: 595 ccaagagggcggagatcccatagaa 619 ||||||||||| |||||||| |||| Sbjct: 1119 ccaagagggcgaagatcccagagaa 1095
>gb|AY086929.1| Arabidopsis thaliana clone 29662 mRNA, complete sequence Length = 1723 Score = 73.8 bits (37), Expect = 6e-10 Identities = 73/85 (85%) Strand = Plus / Minus Query: 535 ttcttgttcaatgtaatgctacaaaggtcacacatcttttcgaccttgtttccagtcaag 594 |||||||||||||||||||| || || || || | ||| || ||||||||||| ||||| Sbjct: 1200 ttcttgttcaatgtaatgctgcacagatcgcagagcttctcaaccttgtttccggtcaat 1141 Query: 595 ccaagagggcggagatcccatagaa 619 ||||||||||| |||||||| |||| Sbjct: 1140 ccaagagggcgaagatcccagagaa 1116
>gb|AF498512.1| Zea mays cultivar H98 hydroxymethyltransferase-like protein gene, 3'UTR and partial cds Length = 259 Score = 60.0 bits (30), Expect = 9e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 240 ctactccttgtacttcatgctctcgagcgtgaagccgggcatgtcaaagg 289 |||||||||||| ||||||||||| |||||||| || |||||||| |||| Sbjct: 210 ctactccttgtatttcatgctctcaagcgtgaacccaggcatgtcgaagg 259
>gb|AF498513.1| Zea mays cultivar C123 hydroxymethyltransferase-like protein gene, 3'UTR and partial cds Length = 256 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 240 ctactccttgtacttcatgctctcgagcgtgaagccgggcatgtc 284 |||||||||||| ||||||||||| |||||||| || |||||||| Sbjct: 210 ctactccttgtatttcatgctctcaagcgtgaacccaggcatgtc 254
>gb|BC108318.1| Homo sapiens ligase I, DNA, ATP-dependent, mRNA (cDNA clone MGC:117397 IMAGE:6141535), complete cds Length = 3421 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 421 aggaactcggcgatctgctcgaagtcctt 449 |||||||||||||||||||||| |||||| Sbjct: 2552 aggaactcggcgatctgctcgatgtcctt 2524
>ref|XM_524321.1| PREDICTED: Pan troglodytes DNA ligase I (LOC468936), mRNA Length = 4041 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 421 aggaactcggcgatctgctcgaagtcctt 449 |||||||||||||||||||||| |||||| Sbjct: 3077 aggaactcggcgatctgctcgacgtcctt 3049
>gb|AF527418.1| Homo sapiens ligase I, DNA, ATP-dependent (LIG1) gene, complete cds Length = 56408 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 421 aggaactcggcgatctgctcgaagtcctt 449 |||||||||||||||||||||| |||||| Sbjct: 48020 aggaactcggcgatctgctcgatgtcctt 47992
>emb|CR619348.1| full-length cDNA clone CS0DJ001YC06 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 1500 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 421 aggaactcggcgatctgctcgaagtcctt 449 |||||||||||||||||||||| |||||| Sbjct: 784 aggaactcggcgatctgctcgatgtcctt 756
>emb|CR599472.1| full-length cDNA clone CS0DJ009YF03 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 1637 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 421 aggaactcggcgatctgctcgaagtcctt 449 |||||||||||||||||||||| |||||| Sbjct: 854 aggaactcggcgatctgctcgatgtcctt 826
>gb|AC010458.6| Homo sapiens chromosome 19 clone CTD-2265M8, complete sequence Length = 105788 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 421 aggaactcggcgatctgctcgaagtcctt 449 |||||||||||||||||||||| |||||| Sbjct: 7643 aggaactcggcgatctgctcgatgtcctt 7615
>gb|AC011466.6| Homo sapiens chromosome 19 clone CTC-453G23, complete sequence Length = 167272 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 421 aggaactcggcgatctgctcgaagtcctt 449 |||||||||||||||||||||| |||||| Sbjct: 40781 aggaactcggcgatctgctcgatgtcctt 40809
>gb|BC110622.1| Homo sapiens ligase I, DNA, ATP-dependent, mRNA (cDNA clone MGC:130025 IMAGE:40035687), complete cds Length = 3965 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 421 aggaactcggcgatctgctcgaagtcctt 449 |||||||||||||||||||||| |||||| Sbjct: 2201 aggaactcggcgatctgctcgatgtcctt 2173
>ref|NM_000234.1| Homo sapiens ligase I, DNA, ATP-dependent (LIG1), mRNA Length = 3083 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 421 aggaactcggcgatctgctcgaagtcctt 449 |||||||||||||||||||||| |||||| Sbjct: 2252 aggaactcggcgatctgctcgatgtcctt 2224
>dbj|AB208791.1| Homo sapiens mRNA for DNA ligase I variant protein Length = 4102 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 421 aggaactcggcgatctgctcgaagtcctt 449 |||||||||||||||||||||| |||||| Sbjct: 2272 aggaactcggcgatctgctcgatgtcctt 2244
>gb|M36067.1|HUMLIGAA Human DNA ligase I mRNA, complete cds Length = 3083 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 421 aggaactcggcgatctgctcgaagtcctt 449 |||||||||||||||||||||| |||||| Sbjct: 2252 aggaactcggcgatctgctcgatgtcctt 2224
>ref|NM_117463.2| Arabidopsis thaliana glycine hydroxymethyltransferase AT4G13890 mRNA, complete cds Length = 1592 Score = 46.1 bits (23), Expect = 0.14 Identities = 38/43 (88%) Strand = Plus / Minus Query: 577 accttgtttccagtcaagccaagagggcggagatcccatagaa 619 |||||||| || ||||| ||||||||||| |||||||| |||| Sbjct: 1084 accttgttaccggtcaatccaagagggcgaagatcccaaagaa 1042 Score = 40.1 bits (20), Expect = 8.4 Identities = 53/64 (82%) Strand = Plus / Minus Query: 331 tccttgttgttcaccaggcccttggagaagtccttgagcagcttcccgtgctccttctgg 390 |||||||||||||||| |||||| ||||||||| | || ||| |||| || || |||| Sbjct: 1330 tccttgttgttcaccaaacccttgttgaagtccttcatcaccttaccgtactgctcctgg 1271 Query: 391 atgt 394 |||| Sbjct: 1270 atgt 1267
>ref|XM_779683.1| PREDICTED: Strongylocentrotus purpuratus similar to serine hydroxymethyltransferase 2 (mitochondrial) (LOC579575), mRNA Length = 1847 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Minus Query: 466 gaggtcatagcaggagcaccaat 488 ||||||||||||||||||||||| Sbjct: 1335 gaggtcatagcaggagcaccaat 1313
>gb|AY670581.1| Pinus taeda isolate 27 glycine hydroxymethyltransferase gene, partial cds Length = 552 Score = 44.1 bits (22), Expect = 0.54 Identities = 70/86 (81%) Strand = Plus / Minus Query: 483 accaatgcggacaccacccggggacaatgcactgctgtcaccgaagacagcattcttgtt 542 |||||| || |||||||| ||||||| ||||| |||||||| | || ||||||||||| Sbjct: 318 accaatacgaacaccaccaggggacagagcactactgtcaccataaactgcattcttgtt 259 Query: 543 caatgtaatgctacaaaggtcacaca 568 | ||| || |||| |||||||||| Sbjct: 258 gattgttatattacacaggtcacaca 233
>gb|AY670580.1| Pinus taeda isolate 29 glycine hydroxymethyltransferase gene, partial cds Length = 552 Score = 44.1 bits (22), Expect = 0.54 Identities = 70/86 (81%) Strand = Plus / Minus Query: 483 accaatgcggacaccacccggggacaatgcactgctgtcaccgaagacagcattcttgtt 542 |||||| || |||||||| ||||||| ||||| |||||||| | || ||||||||||| Sbjct: 318 accaatacgaacaccaccaggggacagagcactactgtcaccataaactgcattcttgtt 259 Query: 543 caatgtaatgctacaaaggtcacaca 568 | ||| || |||| |||||||||| Sbjct: 258 gattgttatattacacaggtcacaca 233
>gb|AY670579.1| Pinus taeda isolate 1 glycine hydroxymethyltransferase gene, partial cds Length = 552 Score = 44.1 bits (22), Expect = 0.54 Identities = 70/86 (81%) Strand = Plus / Minus Query: 483 accaatgcggacaccacccggggacaatgcactgctgtcaccgaagacagcattcttgtt 542 |||||| || |||||||| ||||||| ||||| |||||||| | || ||||||||||| Sbjct: 318 accaatacgaacaccaccaggggacagagcactactgtcaccataaactgcattcttgtt 259 Query: 543 caatgtaatgctacaaaggtcacaca 568 | ||| || |||| |||||||||| Sbjct: 258 gattgttatattacacaggtcacaca 233
>gb|AY670578.1| Pinus taeda isolate 17 glycine hydroxymethyltransferase gene, partial cds Length = 552 Score = 44.1 bits (22), Expect = 0.54 Identities = 70/86 (81%) Strand = Plus / Minus Query: 483 accaatgcggacaccacccggggacaatgcactgctgtcaccgaagacagcattcttgtt 542 |||||| || |||||||| ||||||| ||||| |||||||| | || ||||||||||| Sbjct: 318 accaatacgaacaccaccaggggacagagcactactgtcaccataaactgcattcttgtt 259 Query: 543 caatgtaatgctacaaaggtcacaca 568 | ||| || |||| |||||||||| Sbjct: 258 gattgttatattacacaggtcacaca 233
>gb|AY670577.1| Pinus taeda isolate 8 glycine hydroxymethyltransferase gene, partial cds Length = 536 Score = 44.1 bits (22), Expect = 0.54 Identities = 70/86 (81%) Strand = Plus / Minus Query: 483 accaatgcggacaccacccggggacaatgcactgctgtcaccgaagacagcattcttgtt 542 |||||| || |||||||| ||||||| ||||| |||||||| | || ||||||||||| Sbjct: 318 accaatacgaacaccaccaggggacagagcactactgtcaccataaactgcattcttgtt 259 Query: 543 caatgtaatgctacaaaggtcacaca 568 | ||| || |||| |||||||||| Sbjct: 258 gattgttatattacacaggtcacaca 233
>gb|AY670576.1| Pinus taeda isolate 28 glycine hydroxymethyltransferase gene, partial cds Length = 552 Score = 44.1 bits (22), Expect = 0.54 Identities = 70/86 (81%) Strand = Plus / Minus Query: 483 accaatgcggacaccacccggggacaatgcactgctgtcaccgaagacagcattcttgtt 542 |||||| || |||||||| ||||||| ||||| |||||||| | || ||||||||||| Sbjct: 318 accaatacgaacaccaccaggggacagagcactactgtcaccataaactgcattcttgtt 259 Query: 543 caatgtaatgctacaaaggtcacaca 568 | ||| || |||| |||||||||| Sbjct: 258 gattgttatattacacaggtcacaca 233
>gb|AY670575.1| Pinus taeda isolate 19 glycine hydroxymethyltransferase gene, partial cds Length = 552 Score = 44.1 bits (22), Expect = 0.54 Identities = 70/86 (81%) Strand = Plus / Minus Query: 483 accaatgcggacaccacccggggacaatgcactgctgtcaccgaagacagcattcttgtt 542 |||||| || |||||||| ||||||| ||||| |||||||| | || ||||||||||| Sbjct: 318 accaatacgaacaccaccaggggacagagcactactgtcaccataaactgcattcttgtt 259 Query: 543 caatgtaatgctacaaaggtcacaca 568 | ||| || |||| |||||||||| Sbjct: 258 gattgttatattacacaggtcacaca 233
>gb|AY670574.1| Pinus taeda isolate 3 glycine hydroxymethyltransferase gene, partial cds Length = 552 Score = 44.1 bits (22), Expect = 0.54 Identities = 70/86 (81%) Strand = Plus / Minus Query: 483 accaatgcggacaccacccggggacaatgcactgctgtcaccgaagacagcattcttgtt 542 |||||| || |||||||| ||||||| ||||| |||||||| | || ||||||||||| Sbjct: 318 accaatacgaacaccaccaggggacagagcactactgtcaccataaactgcattcttgtt 259 Query: 543 caatgtaatgctacaaaggtcacaca 568 | ||| || |||| |||||||||| Sbjct: 258 gattgttatattacacaggtcacaca 233
>gb|AY670573.1| Pinus taeda isolate 2 glycine hydroxymethyltransferase gene, partial cds Length = 552 Score = 44.1 bits (22), Expect = 0.54 Identities = 70/86 (81%) Strand = Plus / Minus Query: 483 accaatgcggacaccacccggggacaatgcactgctgtcaccgaagacagcattcttgtt 542 |||||| || |||||||| ||||||| ||||| |||||||| | || ||||||||||| Sbjct: 318 accaatacgaacaccaccaggggacagagcactactgtcaccataaactgcattcttgtt 259 Query: 543 caatgtaatgctacaaaggtcacaca 568 | ||| || |||| |||||||||| Sbjct: 258 gattgttatattacacaggtcacaca 233
>gb|AY670572.1| Pinus taeda isolate 10 glycine hydroxymethyltransferase gene, partial cds Length = 536 Score = 44.1 bits (22), Expect = 0.54 Identities = 70/86 (81%) Strand = Plus / Minus Query: 483 accaatgcggacaccacccggggacaatgcactgctgtcaccgaagacagcattcttgtt 542 |||||| || |||||||| ||||||| ||||| |||||||| | || ||||||||||| Sbjct: 318 accaatacgaacaccaccaggggacagagcactactgtcaccataaactgcattcttgtt 259 Query: 543 caatgtaatgctacaaaggtcacaca 568 | ||| || |||| |||||||||| Sbjct: 258 gattgttatattacacaggtcacaca 233
>gb|AY670571.1| Pinus taeda isolate 30 glycine hydroxymethyltransferase gene, partial cds Length = 552 Score = 44.1 bits (22), Expect = 0.54 Identities = 70/86 (81%) Strand = Plus / Minus Query: 483 accaatgcggacaccacccggggacaatgcactgctgtcaccgaagacagcattcttgtt 542 |||||| || |||||||| ||||||| ||||| |||||||| | || ||||||||||| Sbjct: 318 accaatacgaacaccaccaggggacagagcactactgtcaccataaactgcattcttgtt 259 Query: 543 caatgtaatgctacaaaggtcacaca 568 | ||| || |||| |||||||||| Sbjct: 258 gattgttatattacacaggtcacaca 233
>gb|AY670570.1| Pinus taeda isolate 13 glycine hydroxymethyltransferase gene, partial cds Length = 536 Score = 44.1 bits (22), Expect = 0.54 Identities = 70/86 (81%) Strand = Plus / Minus Query: 483 accaatgcggacaccacccggggacaatgcactgctgtcaccgaagacagcattcttgtt 542 |||||| || |||||||| ||||||| ||||| |||||||| | || ||||||||||| Sbjct: 318 accaatacgaacaccaccaggggacagagcactactgtcaccataaactgcattcttgtt 259 Query: 543 caatgtaatgctacaaaggtcacaca 568 | ||| || |||| |||||||||| Sbjct: 258 gattgttatattacacaggtcacaca 233
>gb|AY670569.1| Pinus taeda isolate 25 glycine hydroxymethyltransferase gene, partial cds Length = 536 Score = 44.1 bits (22), Expect = 0.54 Identities = 70/86 (81%) Strand = Plus / Minus Query: 483 accaatgcggacaccacccggggacaatgcactgctgtcaccgaagacagcattcttgtt 542 |||||| || |||||||| ||||||| ||||| |||||||| | || ||||||||||| Sbjct: 318 accaatacgaacaccaccaggggacagagcactactgtcaccataaactgcattcttgtt 259 Query: 543 caatgtaatgctacaaaggtcacaca 568 | ||| || |||| |||||||||| Sbjct: 258 gattgttatattacacaggtcacaca 233
>gb|AY670568.1| Pinus taeda isolate 7 glycine hydroxymethyltransferase gene, partial cds Length = 552 Score = 44.1 bits (22), Expect = 0.54 Identities = 70/86 (81%) Strand = Plus / Minus Query: 483 accaatgcggacaccacccggggacaatgcactgctgtcaccgaagacagcattcttgtt 542 |||||| || |||||||| ||||||| ||||| |||||||| | || ||||||||||| Sbjct: 318 accaatacgaacaccaccaggggacagagcactactgtcaccataaactgcattcttgtt 259 Query: 543 caatgtaatgctacaaaggtcacaca 568 | ||| || |||| |||||||||| Sbjct: 258 gattgttatattacacaggtcacaca 233
>gb|AY670567.1| Pinus taeda isolate 11 glycine hydroxymethyltransferase gene, partial cds Length = 536 Score = 44.1 bits (22), Expect = 0.54 Identities = 70/86 (81%) Strand = Plus / Minus Query: 483 accaatgcggacaccacccggggacaatgcactgctgtcaccgaagacagcattcttgtt 542 |||||| || |||||||| ||||||| ||||| |||||||| | || ||||||||||| Sbjct: 318 accaatacgaacaccaccaggggacagagcactactgtcaccataaactgcattcttgtt 259 Query: 543 caatgtaatgctacaaaggtcacaca 568 | ||| || |||| |||||||||| Sbjct: 258 gattgttatattacacaggtcacaca 233
>gb|AY670566.1| Pinus taeda isolate 24 glycine hydroxymethyltransferase gene, partial cds Length = 552 Score = 44.1 bits (22), Expect = 0.54 Identities = 70/86 (81%) Strand = Plus / Minus Query: 483 accaatgcggacaccacccggggacaatgcactgctgtcaccgaagacagcattcttgtt 542 |||||| || |||||||| ||||||| ||||| |||||||| | || ||||||||||| Sbjct: 318 accaatacgaacaccaccaggggacagagcactactgtcaccataaactgcattcttgtt 259 Query: 543 caatgtaatgctacaaaggtcacaca 568 | ||| || |||| |||||||||| Sbjct: 258 gattgttatattacacaggtcacaca 233
>gb|AY670565.1| Pinus taeda isolate 12 glycine hydroxymethyltransferase gene, partial cds Length = 536 Score = 44.1 bits (22), Expect = 0.54 Identities = 70/86 (81%) Strand = Plus / Minus Query: 483 accaatgcggacaccacccggggacaatgcactgctgtcaccgaagacagcattcttgtt 542 |||||| || |||||||| ||||||| ||||| |||||||| | || ||||||||||| Sbjct: 318 accaatacgaacaccaccaggggacagagcactactgtcaccataaactgcattcttgtt 259 Query: 543 caatgtaatgctacaaaggtcacaca 568 | ||| || |||| |||||||||| Sbjct: 258 gattgttatattacacaggtcacaca 233
>gb|AY670564.1| Pinus taeda isolate 20 glycine hydroxymethyltransferase gene, partial cds Length = 552 Score = 44.1 bits (22), Expect = 0.54 Identities = 70/86 (81%) Strand = Plus / Minus Query: 483 accaatgcggacaccacccggggacaatgcactgctgtcaccgaagacagcattcttgtt 542 |||||| || |||||||| ||||||| ||||| |||||||| | || ||||||||||| Sbjct: 318 accaatacgaacaccaccaggggacagagcactactgtcaccataaactgcattcttgtt 259 Query: 543 caatgtaatgctacaaaggtcacaca 568 | ||| || |||| |||||||||| Sbjct: 258 gattgttatattacacaggtcacaca 233
>gb|AY670563.1| Pinus taeda isolate 15 glycine hydroxymethyltransferase gene, partial cds Length = 552 Score = 44.1 bits (22), Expect = 0.54 Identities = 70/86 (81%) Strand = Plus / Minus Query: 483 accaatgcggacaccacccggggacaatgcactgctgtcaccgaagacagcattcttgtt 542 |||||| || |||||||| ||||||| ||||| |||||||| | || ||||||||||| Sbjct: 318 accaatacgaacaccaccaggggacagagcactactgtcaccataaactgcattcttgtt 259 Query: 543 caatgtaatgctacaaaggtcacaca 568 | ||| || |||| |||||||||| Sbjct: 258 gattgttatattacacaggtcacaca 233
>gb|AY670562.1| Pinus taeda isolate 5 glycine hydroxymethyltransferase gene, partial cds Length = 552 Score = 44.1 bits (22), Expect = 0.54 Identities = 70/86 (81%) Strand = Plus / Minus Query: 483 accaatgcggacaccacccggggacaatgcactgctgtcaccgaagacagcattcttgtt 542 |||||| || |||||||| ||||||| ||||| |||||||| | || ||||||||||| Sbjct: 318 accaatacgaacaccaccaggggacagagcactactgtcaccataaactgcattcttgtt 259 Query: 543 caatgtaatgctacaaaggtcacaca 568 | ||| || |||| |||||||||| Sbjct: 258 gattgttatattacacaggtcacaca 233
>gb|AY670561.1| Pinus taeda isolate 31 glycine hydroxymethyltransferase gene, partial cds Length = 552 Score = 44.1 bits (22), Expect = 0.54 Identities = 70/86 (81%) Strand = Plus / Minus Query: 483 accaatgcggacaccacccggggacaatgcactgctgtcaccgaagacagcattcttgtt 542 |||||| || |||||||| ||||||| ||||| |||||||| | || ||||||||||| Sbjct: 318 accaatacgaacaccaccaggggacagagcactactgtcaccataaactgcattcttgtt 259 Query: 543 caatgtaatgctacaaaggtcacaca 568 | ||| || |||| |||||||||| Sbjct: 258 gattgttatattacacaggtcacaca 233
>gb|AY670560.1| Pinus taeda isolate 21 glycine hydroxymethyltransferase gene, partial cds Length = 552 Score = 44.1 bits (22), Expect = 0.54 Identities = 70/86 (81%) Strand = Plus / Minus Query: 483 accaatgcggacaccacccggggacaatgcactgctgtcaccgaagacagcattcttgtt 542 |||||| || |||||||| ||||||| ||||| |||||||| | || ||||||||||| Sbjct: 318 accaatacgaacaccaccaggggacagagcactactgtcaccataaactgcattcttgtt 259 Query: 543 caatgtaatgctacaaaggtcacaca 568 | ||| || |||| |||||||||| Sbjct: 258 gattgttatattacacaggtcacaca 233
>gb|AY670559.1| Pinus taeda isolate 18 glycine hydroxymethyltransferase gene, partial cds Length = 552 Score = 44.1 bits (22), Expect = 0.54 Identities = 70/86 (81%) Strand = Plus / Minus Query: 483 accaatgcggacaccacccggggacaatgcactgctgtcaccgaagacagcattcttgtt 542 |||||| || |||||||| ||||||| ||||| |||||||| | || ||||||||||| Sbjct: 318 accaatacgaacaccaccaggggacagagcactactgtcaccataaactgcattcttgtt 259 Query: 543 caatgtaatgctacaaaggtcacaca 568 | ||| || |||| |||||||||| Sbjct: 258 gattgttatattacacaggtcacaca 233
>gb|AY670557.1| Pinus taeda isolate 22 glycine hydroxymethyltransferase gene, partial cds Length = 552 Score = 44.1 bits (22), Expect = 0.54 Identities = 70/86 (81%) Strand = Plus / Minus Query: 483 accaatgcggacaccacccggggacaatgcactgctgtcaccgaagacagcattcttgtt 542 |||||| || |||||||| ||||||| ||||| |||||||| | || ||||||||||| Sbjct: 318 accaatacgaacaccaccaggggacagagcactactgtcaccataaactgcattcttgtt 259 Query: 543 caatgtaatgctacaaaggtcacaca 568 | ||| || |||| |||||||||| Sbjct: 258 gattgttatattacacaggtcacaca 233
>gb|AY670556.1| Pinus taeda isolate 14 glycine hydroxymethyltransferase gene, partial cds Length = 552 Score = 44.1 bits (22), Expect = 0.54 Identities = 70/86 (81%) Strand = Plus / Minus Query: 483 accaatgcggacaccacccggggacaatgcactgctgtcaccgaagacagcattcttgtt 542 |||||| || |||||||| ||||||| ||||| |||||||| | || ||||||||||| Sbjct: 318 accaatacgaacaccaccaggggacagagcactactgtcaccataaactgcattcttgtt 259 Query: 543 caatgtaatgctacaaaggtcacaca 568 | ||| || |||| |||||||||| Sbjct: 258 gattgttatattacacaggtcacaca 233
>gb|AY670555.1| Pinus taeda isolate 23 glycine hydroxymethyltransferase gene, partial cds Length = 536 Score = 44.1 bits (22), Expect = 0.54 Identities = 70/86 (81%) Strand = Plus / Minus Query: 483 accaatgcggacaccacccggggacaatgcactgctgtcaccgaagacagcattcttgtt 542 |||||| || |||||||| ||||||| ||||| |||||||| | || ||||||||||| Sbjct: 318 accaatacgaacaccaccaggggacagagcactactgtcaccataaactgcattcttgtt 259 Query: 543 caatgtaatgctacaaaggtcacaca 568 | ||| || |||| |||||||||| Sbjct: 258 gattgttatattacacaggtcacaca 233
>gb|AY670554.1| Pinus taeda isolate 9 glycine hydroxymethyltransferase gene, partial cds Length = 552 Score = 44.1 bits (22), Expect = 0.54 Identities = 70/86 (81%) Strand = Plus / Minus Query: 483 accaatgcggacaccacccggggacaatgcactgctgtcaccgaagacagcattcttgtt 542 |||||| || |||||||| ||||||| ||||| |||||||| | || ||||||||||| Sbjct: 318 accaatacgaacaccaccaggggacagagcactactgtcaccataaactgcattcttgtt 259 Query: 543 caatgtaatgctacaaaggtcacaca 568 | ||| || |||| |||||||||| Sbjct: 258 gattgttatattacacaggtcacaca 233
>gb|AY670553.1| Pinus taeda isolate 26 glycine hydroxymethyltransferase gene, partial cds Length = 536 Score = 44.1 bits (22), Expect = 0.54 Identities = 70/86 (81%) Strand = Plus / Minus Query: 483 accaatgcggacaccacccggggacaatgcactgctgtcaccgaagacagcattcttgtt 542 |||||| || |||||||| ||||||| ||||| |||||||| | || ||||||||||| Sbjct: 318 accaatacgaacaccaccaggggacagagcactactgtcaccataaactgcattcttgtt 259 Query: 543 caatgtaatgctacaaaggtcacaca 568 | ||| || |||| |||||||||| Sbjct: 258 gattgttatattacacaggtcacaca 233
>gb|AY670552.1| Pinus taeda isolate 4 glycine hydroxymethyltransferase gene, partial cds Length = 536 Score = 44.1 bits (22), Expect = 0.54 Identities = 70/86 (81%) Strand = Plus / Minus Query: 483 accaatgcggacaccacccggggacaatgcactgctgtcaccgaagacagcattcttgtt 542 |||||| || |||||||| ||||||| ||||| |||||||| | || ||||||||||| Sbjct: 318 accaatacgaacaccaccaggggacagagcactactgtcaccataaactgcattcttgtt 259 Query: 543 caatgtaatgctacaaaggtcacaca 568 | ||| || |||| |||||||||| Sbjct: 258 gattgttatattacacaggtcacaca 233
>gb|AY670551.1| Pinus taeda isolate 6 glycine hydroxymethyltransferase gene, partial cds Length = 536 Score = 44.1 bits (22), Expect = 0.54 Identities = 70/86 (81%) Strand = Plus / Minus Query: 483 accaatgcggacaccacccggggacaatgcactgctgtcaccgaagacagcattcttgtt 542 |||||| || |||||||| ||||||| ||||| |||||||| | || ||||||||||| Sbjct: 318 accaatacgaacaccaccaggggacagagcactactgtcaccataaactgcattcttgtt 259 Query: 543 caatgtaatgctacaaaggtcacaca 568 | ||| || |||| |||||||||| Sbjct: 258 gattgttatattacacaggtcacaca 233
>gb|AY670550.1| Pinus taeda isolate 16 glycine hydroxymethyltransferase gene, partial cds Length = 552 Score = 44.1 bits (22), Expect = 0.54 Identities = 70/86 (81%) Strand = Plus / Minus Query: 483 accaatgcggacaccacccggggacaatgcactgctgtcaccgaagacagcattcttgtt 542 |||||| || |||||||| ||||||| ||||| |||||||| | || ||||||||||| Sbjct: 318 accaatacgaacaccaccaggggacagagcactactgtcaccataaactgcattcttgtt 259 Query: 543 caatgtaatgctacaaaggtcacaca 568 | ||| || |||| |||||||||| Sbjct: 258 gattgttatattacacaggtcacaca 233
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 423 gaactcggcgatctgctcgaag 444 |||||||||||||||||||||| Sbjct: 3440576 gaactcggcgatctgctcgaag 3440555
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome Length = 3052398 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 423 gaactcggcgatctgctcgaag 444 |||||||||||||||||||||| Sbjct: 2659689 gaactcggcgatctgctcgaag 2659668
>emb|Z97335.2|ATFCA0 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 0 Length = 200576 Score = 42.1 bits (21), Expect = 2.1 Identities = 45/53 (84%) Strand = Plus / Plus Query: 535 ttcttgttcaatgtaatgctacaaaggtcacacatcttttcgaccttgtttcc 587 |||||||||||||||||||| || || || || | ||| || ||||||||||| Sbjct: 6293 ttcttgttcaatgtaatgctgcacagatcgcagagcttctcaaccttgtttcc 6345
>emb|AL161537.2|ATCHRIV37 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 37 Length = 199667 Score = 42.1 bits (21), Expect = 2.1 Identities = 45/53 (84%) Strand = Plus / Plus Query: 535 ttcttgttcaatgtaatgctacaaaggtcacacatcttttcgaccttgtttcc 587 |||||||||||||||||||| || || || || | ||| || ||||||||||| Sbjct: 140508 ttcttgttcaatgtaatgctgcacagatcgcagagcttctcaaccttgtttcc 140560 Score = 40.1 bits (20), Expect = 8.4 Identities = 53/64 (82%) Strand = Plus / Plus Query: 331 tccttgttgttcaccaggcccttggagaagtccttgagcagcttcccgtgctccttctgg 390 |||||||||||||||| |||||| ||||||||| | || ||| |||| || || |||| Sbjct: 124342 tccttgttgttcaccaaacccttgttgaagtccttcatcaccttaccgtactgctcctgg 124401 Query: 391 atgt 394 |||| Sbjct: 124402 atgt 124405
>ref|NM_137344.2| Drosophila melanogaster CG30456-RA (CG30456), mRNA Length = 2386 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 422 ggaactcggcgatctgctcga 442 ||||||||||||||||||||| Sbjct: 1061 ggaactcggcgatctgctcga 1041
>gb|AC099032.1| Drosophila melanogaster, chromosome 2R, region 53F-54A, BAC clone BACR32P08, complete sequence Length = 163072 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 422 ggaactcggcgatctgctcga 442 ||||||||||||||||||||| Sbjct: 113467 ggaactcggcgatctgctcga 113447
>gb|AY224188.1| Medicago truncatula adenosylhomocysteinase (AHC1) gene, complete cds Length = 99431 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 586 ccagtcaagccaagagggcggagatccca 614 |||||||| ||||||||||| |||||||| Sbjct: 62812 ccagtcaatccaagagggcgaagatccca 62784
>gb|AC007520.8|AC007520 Drosophila melanogaster, chromosome 2R, region 53D-54A, BAC clone BACR11M15, complete sequence Length = 170994 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 422 ggaactcggcgatctgctcga 442 ||||||||||||||||||||| Sbjct: 37634 ggaactcggcgatctgctcga 37614
>gb|AE003804.4| Drosophila melanogaster chromosome 2R, section 46 of 73 of the complete sequence Length = 260337 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 422 ggaactcggcgatctgctcga 442 ||||||||||||||||||||| Sbjct: 100759 ggaactcggcgatctgctcga 100739
>ref|XM_510545.1| PREDICTED: Pan troglodytes similar to transmembrane channel-like 3 (LOC453589), mRNA Length = 4479 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 395 tcaggcagatggtcactgcc 414 |||||||||||||||||||| Sbjct: 1951 tcaggcagatggtcactgcc 1932
>gb|AC167561.3| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940117D9, complete sequence Length = 143368 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 303 ctcgacctcgaccttgaggt 322 |||||||||||||||||||| Sbjct: 43746 ctcgacctcgaccttgaggt 43727
>gb|AY670558.1| Pinus taeda isolate 32 glycine hydroxymethyltransferase gene, partial cds Length = 536 Score = 40.1 bits (20), Expect = 8.4 Identities = 62/76 (81%) Strand = Plus / Minus Query: 493 acaccacccggggacaatgcactgctgtcaccgaagacagcattcttgttcaatgtaatg 552 |||||||| ||||||| ||||| |||||||| | || ||||||||||| | ||| || Sbjct: 308 acaccaccaggggacagagcactactgtcaccataaactgcattcttgttgattgttata 249 Query: 553 ctacaaaggtcacaca 568 |||| |||||||||| Sbjct: 248 ttacacaggtcacaca 233
>ref|XM_455485.1| Kluyveromyces lactis NRRL Y-1140, KLLA0F08921g predicted mRNA Length = 1410 Score = 40.1 bits (20), Expect = 8.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 469 gtcatagcaggagcaccaatgcggacaccacc 500 |||||||| |||||||| || ||||||||||| Sbjct: 1199 gtcatagctggagcaccgatacggacaccacc 1168
>gb|AY316747.1| Rhizobium sp. NGR234 megaplasmid 2 contig 1, complete sequence Length = 357655 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 320 ggttctcaatgtccttgttg 339 |||||||||||||||||||| Sbjct: 235786 ggttctcaatgtccttgttg 235805
>gb|AC132366.4| Mus musculus BAC clone RP23-461N12 from chromosome 7, complete sequence Length = 183964 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 tcctactccttgtacttcat 257 |||||||||||||||||||| Sbjct: 29775 tcctactccttgtacttcat 29756
>ref|XM_774258.1| Giardia lamblia ATCC 50803 hypothetical protein (GLP_165_11606_4440) partial mRNA Length = 7167 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 369 cagcttcccgtgctccttctggat 392 |||||||||||||| ||||||||| Sbjct: 1776 cagcttcccgtgctgcttctggat 1753
>gb|DQ450540.1| Trypanosoma pestanai alpha tubulin and beta tubulin genes, partial cds Length = 1087 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 562 tcacacatcttttcgaccttgttt 585 |||| ||||||||||||||||||| Sbjct: 697 tcacgcatcttttcgaccttgttt 674
>ref|XM_545878.2| PREDICTED: Canis familiaris similar to transmembrane channel-like gene family 3 (LOC488760), mRNA Length = 3399 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 395 tcaggcagatggtcactgcc 414 |||||||||||||||||||| Sbjct: 955 tcaggcagatggtcactgcc 936
>ref|XM_671252.1| Plasmodium berghei strain ANKA hypothetical protein (PB000066.03.0) partial mRNA Length = 1461 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 attattggcaatactcgaca 33 |||||||||||||||||||| Sbjct: 572 attattggcaatactcgaca 553
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 gaggaactcggcgatctgct 439 |||||||||||||||||||| Sbjct: 3072599 gaggaactcggcgatctgct 3072618
>gb|AY236490.1| Homo sapiens transmembrane channel-like protein 3 (TMC3) mRNA, complete cds Length = 2442 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 395 tcaggcagatggtcactgcc 414 |||||||||||||||||||| Sbjct: 1033 tcaggcagatggtcactgcc 1014
>emb|AL137848.5| Human DNA sequence from clone RP11-77D6 on chromosome 9q31.1-32 Contains part of a novel gene, the OGN gene for osteoglycin (osteoinductive factor, mimecan), the OMD gene for osteomodulin, the ASPN gene for asporin (LRR class 1) and the 3' end of the ECM2 gene for extracellular matrix protein 2 (female organ and adipocyte specific), complete sequence Length = 152341 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 402 gatggtcactgcctggtggaggaa 425 |||||||||||||||| ||||||| Sbjct: 61928 gatggtcactgcctgggggaggaa 61951
>gb|AY263163.1| Homo sapiens TMC3 protein (TMC3) mRNA, complete cds Length = 4746 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 395 tcaggcagatggtcactgcc 414 |||||||||||||||||||| Sbjct: 994 tcaggcagatggtcactgcc 975
>emb|CR382126.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-1140 of Kluyveromyces lactis Length = 2602197 Score = 40.1 bits (20), Expect = 8.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 469 gtcatagcaggagcaccaatgcggacaccacc 500 |||||||| |||||||| || ||||||||||| Sbjct: 829212 gtcatagctggagcaccgatacggacaccacc 829243
>emb|AL035528.2|ATF18A5 Arabidopsis thaliana DNA chromosome 4, BAC clone F18A5 (ESSA project) Length = 118718 Score = 40.1 bits (20), Expect = 8.4 Identities = 53/64 (82%) Strand = Plus / Plus Query: 331 tccttgttgttcaccaggcccttggagaagtccttgagcagcttcccgtgctccttctgg 390 |||||||||||||||| |||||| ||||||||| | || ||| |||| || || |||| Sbjct: 103250 tccttgttgttcaccaaacccttgttgaagtccttcatcaccttaccgtactgctcctgg 103309 Query: 391 atgt 394 |||| Sbjct: 103310 atgt 103313
>emb|BX640632.1|HSM806678 Homo sapiens mRNA; cDNA DKFZp686L09244 (from clone DKFZp686L09244) Length = 11482 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 395 tcaggcagatggtcactgcc 414 |||||||||||||||||||| Sbjct: 1091 tcaggcagatggtcactgcc 1072
>gb|AC103858.2| Homo sapiens chromosome 15, clone RP11-761I4, complete sequence Length = 194996 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 395 tcaggcagatggtcactgcc 414 |||||||||||||||||||| Sbjct: 167491 tcaggcagatggtcactgcc 167510
>gb|AC109809.3| Homo sapiens chromosome 15, clone CTD-2240J17, complete sequence Length = 116491 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 395 tcaggcagatggtcactgcc 414 |||||||||||||||||||| Sbjct: 76587 tcaggcagatggtcactgcc 76568
>ref|XM_937643.1| PREDICTED: Homo sapiens transmembrane channel-like 3 (TMC3), mRNA Length = 3303 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 395 tcaggcagatggtcactgcc 414 |||||||||||||||||||| Sbjct: 955 tcaggcagatggtcactgcc 936
>ref|XM_930010.1| PREDICTED: Homo sapiens transmembrane channel-like 3 (TMC3), mRNA Length = 3303 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 395 tcaggcagatggtcactgcc 414 |||||||||||||||||||| Sbjct: 955 tcaggcagatggtcactgcc 936
>gb|DQ274179.2| Solanum tuberosum patatin-rich BAC 14K07, complete sequence Length = 154382 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 582 gtttccagtcaagccaagag 601 |||||||||||||||||||| Sbjct: 108147 gtttccagtcaagccaagag 108128
>dbj|BS000094.1| Pan troglodytes chromosome 22 clone:PTB-240N13, map 22, complete sequences Length = 155513 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 531 agcattcttgttcaatgtaa 550 |||||||||||||||||||| Sbjct: 59428 agcattcttgttcaatgtaa 59447
>dbj|AP001690.1| Homo sapiens genomic DNA, chromosome 21q, section 34/105 Length = 340000 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 531 agcattcttgttcaatgtaa 550 |||||||||||||||||||| Sbjct: 8352 agcattcttgttcaatgtaa 8371
>dbj|AP000469.3| Homo sapiens genomic DNA, chromosome 21q, clone:RP11-132H24, complete sequence Length = 136804 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 531 agcattcttgttcaatgtaa 550 |||||||||||||||||||| Sbjct: 30469 agcattcttgttcaatgtaa 30488
>dbj|AB009589.1| Homo sapiens gene for Osteomodulin, complete cds Length = 12414 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 402 gatggtcactgcctggtggaggaa 425 |||||||||||||||| ||||||| Sbjct: 7498 gatggtcactgcctgggggaggaa 7475
>gb|AC130532.3| Mus musculus BAC clone RP23-189G24 from 7, complete sequence Length = 207333 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 tcctactccttgtacttcat 257 |||||||||||||||||||| Sbjct: 200636 tcctactccttgtacttcat 200617
>gb|U00090.1| Rhizobium sp. NGR234 plasmid pNGR234a, complete sequence Length = 536165 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 198 aaggcttagaagcgagacaa 217 |||||||||||||||||||| Sbjct: 236545 aaggcttagaagcgagacaa 236526
>dbj|AP000461.1| Homo sapiens genomic DNA, chromosome 21q21.2, clone:f15D6, complete sequence Length = 22325 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 531 agcattcttgttcaatgtaa 550 |||||||||||||||||||| Sbjct: 19109 agcattcttgttcaatgtaa 19090 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,259,904 Number of Sequences: 3902068 Number of extensions: 5259904 Number of successful extensions: 99404 Number of sequences better than 10.0: 135 Number of HSP's better than 10.0 without gapping: 135 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 98884 Number of HSP's gapped (non-prelim): 520 length of query: 619 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 596 effective length of database: 17,143,297,704 effective search space: 10217405431584 effective search space used: 10217405431584 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
