>KIF2_MOUSE (P28740) Kinesin-like protein KIF2|
          Length = 716

 Score = 35.0 bits (79), Expect = 0.056
 Identities = 18/50 (36%), Positives = 28/50 (56%)
 Frame = -1

Query: 157 EEDLVSVHRKQVEETLDIIKEEMNLLIEADQPGNQLDDYVTRLSGILSQK 8
           EE +V  HR   +E++  I++E  LL   ++    +D Y T+L  IL QK
Sbjct: 631 EEQVVEDHRAVFQESIRWIEDEKALLEMTEEVDYDVDSYATQLEAILEQK 680

>KIF2_HUMAN (O00139) Kinesin-like protein KIF2 (Kinesin-2) (HK2)|
          Length = 679

 Score = 34.3 bits (77), Expect = 0.096
 Identities = 17/50 (34%), Positives = 28/50 (56%)
 Frame = -1

Query: 157 EEDLVSVHRKQVEETLDIIKEEMNLLIEADQPGNQLDDYVTRLSGILSQK 8
           EE +V  HR   +E++  +++E  LL   ++    +D Y T+L  IL QK
Sbjct: 594 EEQVVEDHRAVFQESIRWLEDEKALLEMTEEVDYDVDSYATQLEAILEQK 643

>IF2_EHRRW (Q5HB61) Translation initiation factor IF-2|
          Length = 856

 Score = 31.6 bits (70), Expect = 0.62
 Identities = 16/41 (39%), Positives = 28/41 (68%)
 Frame = -1

Query: 157 EEDLVSVHRKQVEETLDIIKEEMNLLIEADQPGNQLDDYVT 35
           EE+++SV + +VE+++D++    NLLIE+D     + D VT
Sbjct: 118 EEEVISV-KAEVEQSVDVVLPNDNLLIESDSSEKVIVDPVT 157

>VAMP1_HUMAN (P23763) Vesicle-associated membrane protein 1 (VAMP-1)|
           (Synaptobrevin-1)
          Length = 118

 Score = 31.6 bits (70), Expect = 0.62
 Identities = 16/39 (41%), Positives = 24/39 (61%)
 Frame = -1

Query: 127 QVEETLDIIKEEMNLLIEADQPGNQLDDYVTRLSGILSQ 11
           QVEE +DII+  ++ ++E DQ  ++LDD    L    SQ
Sbjct: 40  QVEEVVDIIRVNVDKVLERDQKLSELDDRADALQAGASQ 78

>SYB_TORCA (P13701) Synaptobrevin (Synaptic vesicle-associated integral|
           membrane protein) (VAMP-1)
          Length = 120

 Score = 31.6 bits (70), Expect = 0.62
 Identities = 16/39 (41%), Positives = 24/39 (61%)
 Frame = -1

Query: 127 QVEETLDIIKEEMNLLIEADQPGNQLDDYVTRLSGILSQ 11
           QVEE +DII+  ++ ++E DQ  ++LDD    L    SQ
Sbjct: 42  QVEEVVDIIRVNVDKVLERDQKLSELDDRADALQAGASQ 80

>IF2_EHRRG (Q5FGX3) Translation initiation factor IF-2|
          Length = 856

 Score = 30.8 bits (68), Expect = 1.1
 Identities = 16/41 (39%), Positives = 27/41 (65%)
 Frame = -1

Query: 157 EEDLVSVHRKQVEETLDIIKEEMNLLIEADQPGNQLDDYVT 35
           EE+++SV + +VE+ +D++    NLLIE+D     + D VT
Sbjct: 118 EEEVISV-KAEVEQPVDVVLPNDNLLIESDSSEKVIVDPVT 157

>VAMP1_MOUSE (Q62442) Vesicle-associated membrane protein 1 (VAMP-1)|
           (Synaptobrevin-1)
          Length = 118

 Score = 30.4 bits (67), Expect = 1.4
 Identities = 15/39 (38%), Positives = 24/39 (61%)
 Frame = -1

Query: 127 QVEETLDIIKEEMNLLIEADQPGNQLDDYVTRLSGILSQ 11
           QVEE +DI++  ++ ++E DQ  ++LDD    L    SQ
Sbjct: 40  QVEEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQ 78

>VAMP1_RAT (Q63666) Vesicle-associated membrane protein 1 (VAMP-1)|
           (Synaptobrevin-1)
          Length = 118

 Score = 30.0 bits (66), Expect = 1.8
 Identities = 13/28 (46%), Positives = 21/28 (75%)
 Frame = -1

Query: 127 QVEETLDIIKEEMNLLIEADQPGNQLDD 44
           QVEE +DII+  ++ ++E DQ  ++LDD
Sbjct: 40  QVEEVVDIIRVNVDKVLERDQKLSELDD 67

>MYO5A_CHICK (Q02440) Myosin-5A (Myosin Va) (Dilute myosin heavy chain,|
            non-muscle) (Myosin heavy chain p190) (Myosin-V)
          Length = 1829

 Score = 29.3 bits (64), Expect = 3.1
 Identities = 11/28 (39%), Positives = 20/28 (71%)
 Frame = -1

Query: 127  QVEETLDIIKEEMNLLIEADQPGNQLDD 44
            ++EE  D +K+EMNL++   +PG++  D
Sbjct: 1088 RLEERYDDLKDEMNLMVSIPKPGHKRTD 1115

>SYB_LOLPE (P47194) Synaptobrevin|
          Length = 125

 Score = 28.5 bits (62), Expect = 5.2
 Identities = 14/39 (35%), Positives = 23/39 (58%)
 Frame = -1

Query: 127 QVEETLDIIKEEMNLLIEADQPGNQLDDYVTRLSGILSQ 11
           QVEE +DI++  ++ ++E D   ++LDD    L    SQ
Sbjct: 47  QVEEVVDIMRVNVDKVLERDSKISELDDRADALQAGASQ 85

>MYO5A_HUMAN (Q9Y4I1) Myosin-5A (Myosin Va) (Dilute myosin heavy chain,|
            non-muscle) (Myosin heavy chain 12) (Myoxin)
          Length = 1855

 Score = 28.5 bits (62), Expect = 5.2
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = -1

Query: 127  QVEETLDIIKEEMNLLIEADQPGNQLDD 44
            ++EE  D +KEEM L++   +PG++  D
Sbjct: 1087 RLEERYDDLKEEMTLMVHVPKPGHKRTD 1114

>MYO5A_RAT (Q9QYF3) Myosin-5A (Myosin Va) (Dilute myosin heavy chain,|
            non-muscle)
          Length = 1828

 Score = 28.1 bits (61), Expect = 6.9
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = -1

Query: 127  QVEETLDIIKEEMNLLIEADQPGNQLDD 44
            ++EE  D +KEEM L++   +PG++  D
Sbjct: 1087 RLEERYDDLKEEMTLMLNVPKPGHKRTD 1114

>MYO5A_MOUSE (Q99104) Myosin-5A (Myosin Va) (Dilute myosin heavy chain,|
            non-muscle)
          Length = 1853

 Score = 28.1 bits (61), Expect = 6.9
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = -1

Query: 127  QVEETLDIIKEEMNLLIEADQPGNQLDD 44
            ++EE  D +KEEM L++   +PG++  D
Sbjct: 1087 RLEERYDDLKEEMTLMLNVPKPGHKRTD 1114

>TRME_CLOTE (Q899S2) tRNA modification GTPase trmE|
          Length = 459

 Score = 27.7 bits (60), Expect = 9.0
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = -1

Query: 157 EEDLVSVHRKQVEETLDIIKEEMNLLIEADQPG 59
           EEDL  +   QV+E ++ I EE+  L++  + G
Sbjct: 185 EEDLEEITSSQVQEKIEKIIEELERLLDTSEEG 217


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,507,726
Number of Sequences: 219361
Number of extensions: 231636
Number of successful extensions: 937
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 927
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 937
length of database: 80,573,946
effective HSP length: 29
effective length of database: 74,212,477
effective search space used: 1781099448
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)