ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags11n09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1emb|AJ308488.1|HVU308488 Hordeum vulgare mRNA for allene oxide c... 946 0.0
2ref|XM_468844.1| Oryza sativa (japonica cultivar-group), mRNA 533 e-148
3emb|AJ493664.1|OSA493664 Oryza sativa mRNA for allene oxide cycl... 533 e-148
4dbj|AK071443.1| Oryza sativa (japonica cultivar-group) cDNA clon... 533 e-148
5dbj|AK060025.1| Oryza sativa (japonica cultivar-group) cDNA clon... 525 e-146
6gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 519 e-144
7gb|AC106887.3| Oryza sativa chromosome 3 BAC OSJNBa0054H04 genom... 519 e-144
8dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 519 e-144
9gb|AY488136.1| Zea mays allene oxide cyclase (aoc) mRNA, complet... 396 e-107
10gb|AY103942.1| Zea mays PCO144933 mRNA sequence 396 e-107
11gb|BT016725.1| Zea mays clone Contig558 mRNA sequence 381 e-102
12gb|AY154776.1| Physcomitrella patens allene oxide cyclase (aoc) ... 94 6e-16
13emb|AJ508993.1|PPA508993 Physcomitrella patens mRNA for allene o... 94 6e-16
14gb|DQ314585.1| Ipomoea nil chloroplast allene oxide cyclase prec... 68 3e-08
15gb|AF311437.2|AH010657S2 Comamonas testosteroni plasmid pTSA inc... 44 0.46
16gb|AY687339.1| Humulus lupulus allene oxide cyclase C4 mRNA, com... 44 0.46
17gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 42 1.8
18gb|AY687338.1| Humulus lupulus allene oxide cyclase C1 mRNA, com... 40 7.2
19emb|CR457459.9| Zebrafish DNA sequence from clone DKEY-25P11 in ... 40 7.2
20gb|AY135641.1| Solanum tuberosum allene oxide cyclase mRNA, comp... 40 7.2
21gb|AC127308.3| Mus musculus BAC clone RP23-293B20 from 8, comple... 40 7.2
22emb|AL161901.18| Human DNA sequence from clone RP11-521H3 on chr... 40 7.2
23gb|AE005907.1| Caulobacter crescentus CB15 section 233 of 359 of... 40 7.2
24dbj|AB037929.2| Bruguiera sexangula mang-1 mRNA for mangrin, com... 40 7.2
25gb|AY644677.1| Humulus lupulus plastid allene oxide cyclase mRNA... 40 7.2

>emb|AJ308488.1|HVU308488 Hordeum vulgare mRNA for allene oxide cyclase (aoc gene)
          Length = 920

 Score =  946 bits (477), Expect = 0.0
 Identities = 505/509 (99%), Gaps = 4/509 (0%)
 Strand = Plus / Minus

                                                                       
Query: 26  ttgcaacacacggagattcattcaacttgcacgactgcacgagcagttggtgtacataac 85
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 868 ttgcaacacacggagattcattcaacttgcacgactgcacgagcagttggtgtacataac 809

                                                                       
Query: 86  atagctaggtagagtagatcacaggtacagctagtcagtgaagttgttgaggcatgcgtg 145
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 808 atagctaggtagagtagatcacaggtacagctagtcagtgaagttgttgaggcatgcgtg 749

                                                                       
Query: 146 tggctcggtggccttggcggcgggcgttggctcgacggtgggggaaggcgggacgggcgt 205
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 748 tggctcggtggccttggcggcgggcgttggctcgacggtgggggaaggcgggacgggcgt 689

                                                                       
Query: 206 gcagagcagctcctttggcaggtccgggatgcccttgaggtagaaagtgtagaagatctt 265
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 gcagagcagctcctttggcaggtccgggatgcccttgaggtagaaagtgtagaagatctt 629

                                                                       
Query: 266 gaaggggaagacgatctggttgagcttgacctgcccgtagacgccctcgaagacgccgga 325
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 gaaggggaagacgatctggttgagcttgacctgcccgtagacgccctcgaagacgccgga 569

                                                                       
Query: 326 gcctcctgtgacggcgaggtaggactcctcgtaggtgaggtagggcccctgcaggctgat 385
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 gcctcctgtgacggcgaggtaggactcctcgtaggtgaggtagggcccctgcaggctgat 509

                                                                       
Query: 386 gtggcccgtagtcgcccgaagtacatgctgtagatggccctcgtagcggtcgccgttgcg 445
           |||| ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 508 gtgg-ccgtagtcg-ccgaagtacatgctgtagatgg-cctcgtagcggtcgccgttgcg 452

                                                                       
Query: 446 ctccggcacgtgctggatcaggatgcagatccccgccgtgatcccgatccgcttgtccag 505
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 ctccggcacgtgctggatcaggatgcagatccccgccgtgatcccgatccgcttgtccag 392

                                        
Query: 506 gcttcccgttgtacaccttgttggtgaag 534
           || ||||||||||||||||||||||||||
Sbjct: 391 gc-tcccgttgtacaccttgttggtgaag 364



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>ref|XM_468844.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1265

 Score =  533 bits (269), Expect = e-148
 Identities = 387/421 (91%), Gaps = 4/421 (0%)
 Strand = Plus / Minus

                                                                       
Query: 114 agctagtcagtgaagttgttgaggcatgcgtgtggctcggtggccttggcggcgggcgtt 173
           |||||||  ||||||||||||||||| ||||| |||||||||||||||||||| ||||||
Sbjct: 836 agctagttggtgaagttgttgaggcaggcgtggggctcggtggccttggcggctggcgtt 777

                                                                       
Query: 174 ggctcgacggtgggggaaggcgggacgggcgtgcagagcagctcctttggcaggtccggg 233
           ||||||||||| ||||| |||||||||||||||||||||||||||   |||||||| |||
Sbjct: 776 ggctcgacggtcggggacggcgggacgggcgtgcagagcagctcccgcggcaggtcgggg 717

                                                                       
Query: 234 atgcccttgaggtagaaagtgtagaagatcttgaaggggaagacgatctggttgagcttg 293
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 716 atgcccttgaggtagaaggtgtagaagatcttgaaggggaagacgatctggttgagcttg 657

                                                                       
Query: 294 acctgcccgtagacgccctcgaagacgccggagcctcctgtgacggcgaggtaggactcc 353
           ||||| |||||| |||| ||||||||||||||||| || |||||||||||||||||||||
Sbjct: 656 acctggccgtaggcgccttcgaagacgccggagccgccggtgacggcgaggtaggactcc 597

                                                                       
Query: 354 tcgtaggtgaggtagggcccctgcaggctgatgtggcccgtagtcgcccgaagtacatgc 413
           |||||||| ||||| || ||||||| |  ||||||| ||||||||| |||||||| | ||
Sbjct: 596 tcgtaggtcaggtacgggccctgcacggagatgtgg-ccgtagtcg-ccgaagtagaagc 539

                                                                       
Query: 414 tgtagatggccctcgtagcggtcgccgttgcgctccggcacgtgctggatcaggatgcag 473
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 tgtagatgg-cctcgtagcggtcgccgttgcgctccggcacgtgctggatcaggatgcag 480

                                                                       
Query: 474 atccccgccgtgatcccgatccgcttgtccaggcttcccgttgtacaccttgttggtgaa 533
           |||||||||| |||||| | |||||||||||||||| ||| |||||| ||||||||||||
Sbjct: 479 atccccgccgagatccccagccgcttgtccaggctt-ccgctgtacagcttgttggtgaa 421

            
Query: 534 g 534
           |
Sbjct: 420 g 420



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>emb|AJ493664.1|OSA493664 Oryza sativa mRNA for allene oxide cyclase (aoc gene)
          Length = 1171

 Score =  533 bits (269), Expect = e-148
 Identities = 387/421 (91%), Gaps = 4/421 (0%)
 Strand = Plus / Minus

                                                                       
Query: 114 agctagtcagtgaagttgttgaggcatgcgtgtggctcggtggccttggcggcgggcgtt 173
           |||||||  ||||||||||||||||| ||||| |||||||||||||||||||| ||||||
Sbjct: 811 agctagttggtgaagttgttgaggcaggcgtggggctcggtggccttggcggctggcgtt 752

                                                                       
Query: 174 ggctcgacggtgggggaaggcgggacgggcgtgcagagcagctcctttggcaggtccggg 233
           ||||||||||| ||||| |||||||||||||||||||||||||||   |||||||| |||
Sbjct: 751 ggctcgacggtcggggacggcgggacgggcgtgcagagcagctcccgcggcaggtcgggg 692

                                                                       
Query: 234 atgcccttgaggtagaaagtgtagaagatcttgaaggggaagacgatctggttgagcttg 293
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 atgcccttgaggtagaaggtgtagaagatcttgaaggggaagacgatctggttgagcttg 632

                                                                       
Query: 294 acctgcccgtagacgccctcgaagacgccggagcctcctgtgacggcgaggtaggactcc 353
           ||||| |||||| |||| ||||||||||||||||| || |||||||||||||||||||||
Sbjct: 631 acctggccgtaggcgccttcgaagacgccggagccgccggtgacggcgaggtaggactcc 572

                                                                       
Query: 354 tcgtaggtgaggtagggcccctgcaggctgatgtggcccgtagtcgcccgaagtacatgc 413
           |||||||| ||||| || ||||||| |  ||||||| ||||||||| |||||||| | ||
Sbjct: 571 tcgtaggtcaggtacgggccctgcacggagatgtgg-ccgtagtcg-ccgaagtagaagc 514

                                                                       
Query: 414 tgtagatggccctcgtagcggtcgccgttgcgctccggcacgtgctggatcaggatgcag 473
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 tgtagatgg-cctcgtagcggtcgccgttgcgctccggcacgtgctggatcaggatgcag 455

                                                                       
Query: 474 atccccgccgtgatcccgatccgcttgtccaggcttcccgttgtacaccttgttggtgaa 533
           |||||||||| |||||| | |||||||||||||||| ||| |||||| ||||||||||||
Sbjct: 454 atccccgccgagatccccagccgcttgtccaggctt-ccgctgtacagcttgttggtgaa 396

            
Query: 534 g 534
           |
Sbjct: 395 g 395



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>dbj|AK071443.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023091K18, full
           insert sequence
          Length = 1207

 Score =  533 bits (269), Expect = e-148
 Identities = 387/421 (91%), Gaps = 4/421 (0%)
 Strand = Plus / Minus

                                                                       
Query: 114 agctagtcagtgaagttgttgaggcatgcgtgtggctcggtggccttggcggcgggcgtt 173
           |||||||  ||||||||||||||||| ||||| |||||||||||||||||||| ||||||
Sbjct: 852 agctagttggtgaagttgttgaggcaggcgtggggctcggtggccttggcggctggcgtt 793

                                                                       
Query: 174 ggctcgacggtgggggaaggcgggacgggcgtgcagagcagctcctttggcaggtccggg 233
           ||||||||||| ||||| |||||||||||||||||||||||||||   |||||||| |||
Sbjct: 792 ggctcgacggtcggggacggcgggacgggcgtgcagagcagctcccgcggcaggtcgggg 733

                                                                       
Query: 234 atgcccttgaggtagaaagtgtagaagatcttgaaggggaagacgatctggttgagcttg 293
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 atgcccttgaggtagaaggtgtagaagatcttgaaggggaagacgatctggttgagcttg 673

                                                                       
Query: 294 acctgcccgtagacgccctcgaagacgccggagcctcctgtgacggcgaggtaggactcc 353
           ||||| |||||| |||| ||||||||||||||||| || |||||||||||||||||||||
Sbjct: 672 acctggccgtaggcgccttcgaagacgccggagccgccggtgacggcgaggtaggactcc 613

                                                                       
Query: 354 tcgtaggtgaggtagggcccctgcaggctgatgtggcccgtagtcgcccgaagtacatgc 413
           |||||||| ||||| || ||||||| |  ||||||| ||||||||| |||||||| | ||
Sbjct: 612 tcgtaggtcaggtacgggccctgcacggagatgtgg-ccgtagtcg-ccgaagtagaagc 555

                                                                       
Query: 414 tgtagatggccctcgtagcggtcgccgttgcgctccggcacgtgctggatcaggatgcag 473
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 tgtagatgg-cctcgtagcggtcgccgttgcgctccggcacgtgctggatcaggatgcag 496

                                                                       
Query: 474 atccccgccgtgatcccgatccgcttgtccaggcttcccgttgtacaccttgttggtgaa 533
           |||||||||| |||||| | |||||||||||||||| ||| |||||| ||||||||||||
Sbjct: 495 atccccgccgagatccccagccgcttgtccaggctt-ccgctgtacagcttgttggtgaa 437

            
Query: 534 g 534
           |
Sbjct: 436 g 436



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>dbj|AK060025.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-B07, full
           insert sequence
          Length = 1059

 Score =  525 bits (265), Expect = e-146
 Identities = 386/421 (91%), Gaps = 4/421 (0%)
 Strand = Plus / Minus

                                                                       
Query: 114 agctagtcagtgaagttgttgaggcatgcgtgtggctcggtggccttggcggcgggcgtt 173
           |||||||  ||||||||||||||||| ||||| |||||||||||||||||||| ||||||
Sbjct: 741 agctagttggtgaagttgttgaggcaggcgtggggctcggtggccttggcggctggcgtt 682

                                                                       
Query: 174 ggctcgacggtgggggaaggcgggacgggcgtgcagagcagctcctttggcaggtccggg 233
           ||||||||||| ||||| |||||||||||||||||||||||||||   |||||||| |||
Sbjct: 681 ggctcgacggtcggggacggcgggacgggcgtgcagagcagctcccgcggcaggtcgggg 622

                                                                       
Query: 234 atgcccttgaggtagaaagtgtagaagatcttgaaggggaagacgatctggttgagcttg 293
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atgcccttgaggtagaaggtgtagaagatcttgaaggggaagacgatctggttgagcttg 562

                                                                       
Query: 294 acctgcccgtagacgccctcgaagacgccggagcctcctgtgacggcgaggtaggactcc 353
           ||||| |||||| |||| ||||||||||||||||| || || ||||||||||||||||||
Sbjct: 561 acctggccgtaggcgccttcgaagacgccggagccgccggtaacggcgaggtaggactcc 502

                                                                       
Query: 354 tcgtaggtgaggtagggcccctgcaggctgatgtggcccgtagtcgcccgaagtacatgc 413
           |||||||| ||||| || ||||||| |  ||||||| ||||||||| |||||||| | ||
Sbjct: 501 tcgtaggtcaggtacgggccctgcacggagatgtgg-ccgtagtcg-ccgaagtagaagc 444

                                                                       
Query: 414 tgtagatggccctcgtagcggtcgccgttgcgctccggcacgtgctggatcaggatgcag 473
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 tgtagatgg-cctcgtagcggtcgccgttgcgctccggcacgtgctggatcaggatgcag 385

                                                                       
Query: 474 atccccgccgtgatcccgatccgcttgtccaggcttcccgttgtacaccttgttggtgaa 533
           |||||||||| |||||| | |||||||||||||||| ||| |||||| ||||||||||||
Sbjct: 384 atccccgccgagatccccagccgcttgtccaggctt-ccgctgtacagcttgttggtgaa 326

            
Query: 534 g 534
           |
Sbjct: 325 g 325



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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  519 bits (262), Expect = e-144
 Identities = 367/398 (92%), Gaps = 3/398 (0%)
 Strand = Plus / Plus

                                                                            
Query: 114      agctagtcagtgaagttgttgaggcatgcgtgtggctcggtggccttggcggcgggcgtt 173
                |||||||  ||||||||||||||||| ||||| |||||||||||||||||||| ||||||
Sbjct: 18298027 agctagttggtgaagttgttgaggcaggcgtggggctcggtggccttggcggctggcgtt 18298086

                                                                            
Query: 174      ggctcgacggtgggggaaggcgggacgggcgtgcagagcagctcctttggcaggtccggg 233
                ||||||||||| ||||| |||||||||||||||||||||||||||   |||||||| |||
Sbjct: 18298087 ggctcgacggtcggggacggcgggacgggcgtgcagagcagctcccgcggcaggtcgggg 18298146

                                                                            
Query: 234      atgcccttgaggtagaaagtgtagaagatcttgaaggggaagacgatctggttgagcttg 293
                ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18298147 atgcccttgaggtagaaggtgtagaagatcttgaaggggaagacgatctggttgagcttg 18298206

                                                                            
Query: 294      acctgcccgtagacgccctcgaagacgccggagcctcctgtgacggcgaggtaggactcc 353
                ||||| |||||| |||| ||||||||||||||||| || |||||||||||||||||||||
Sbjct: 18298207 acctggccgtaggcgccttcgaagacgccggagccgccggtgacggcgaggtaggactcc 18298266

                                                                            
Query: 354      tcgtaggtgaggtagggcccctgcaggctgatgtggcccgtagtcgcccgaagtacatgc 413
                |||||||| ||||| || ||||||| |  ||||||| ||||||||| |||||||| | ||
Sbjct: 18298267 tcgtaggtcaggtacgggccctgcacggagatgtgg-ccgtagtcg-ccgaagtagaagc 18298324

                                                                            
Query: 414      tgtagatggccctcgtagcggtcgccgttgcgctccggcacgtgctggatcaggatgcag 473
                ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18298325 tgtagatgg-cctcgtagcggtcgccgttgcgctccggcacgtgctggatcaggatgcag 18298383

                                                      
Query: 474      atccccgccgtgatcccgatccgcttgtccaggcttcc 511
                |||||||||| |||||| | ||||||||||||||||||
Sbjct: 18298384 atccccgccgagatccccagccgcttgtccaggcttcc 18298421



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>gb|AC106887.3| Oryza sativa chromosome 3 BAC OSJNBa0054H04 genomic sequence, complete
             sequence
          Length = 159579

 Score =  519 bits (262), Expect = e-144
 Identities = 367/398 (92%), Gaps = 3/398 (0%)
 Strand = Plus / Plus

                                                                         
Query: 114   agctagtcagtgaagttgttgaggcatgcgtgtggctcggtggccttggcggcgggcgtt 173
             |||||||  ||||||||||||||||| ||||| |||||||||||||||||||| ||||||
Sbjct: 64458 agctagttggtgaagttgttgaggcaggcgtggggctcggtggccttggcggctggcgtt 64517

                                                                         
Query: 174   ggctcgacggtgggggaaggcgggacgggcgtgcagagcagctcctttggcaggtccggg 233
             ||||||||||| ||||| |||||||||||||||||||||||||||   |||||||| |||
Sbjct: 64518 ggctcgacggtcggggacggcgggacgggcgtgcagagcagctcccgcggcaggtcgggg 64577

                                                                         
Query: 234   atgcccttgaggtagaaagtgtagaagatcttgaaggggaagacgatctggttgagcttg 293
             ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64578 atgcccttgaggtagaaggtgtagaagatcttgaaggggaagacgatctggttgagcttg 64637

                                                                         
Query: 294   acctgcccgtagacgccctcgaagacgccggagcctcctgtgacggcgaggtaggactcc 353
             ||||| |||||| |||| ||||||||||||||||| || |||||||||||||||||||||
Sbjct: 64638 acctggccgtaggcgccttcgaagacgccggagccgccggtgacggcgaggtaggactcc 64697

                                                                         
Query: 354   tcgtaggtgaggtagggcccctgcaggctgatgtggcccgtagtcgcccgaagtacatgc 413
             |||||||| ||||| || ||||||| |  ||||||| ||||||||| |||||||| | ||
Sbjct: 64698 tcgtaggtcaggtacgggccctgcacggagatgtgg-ccgtagtcg-ccgaagtagaagc 64755

                                                                         
Query: 414   tgtagatggccctcgtagcggtcgccgttgcgctccggcacgtgctggatcaggatgcag 473
             ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64756 tgtagatgg-cctcgtagcggtcgccgttgcgctccggcacgtgctggatcaggatgcag 64814

                                                   
Query: 474   atccccgccgtgatcccgatccgcttgtccaggcttcc 511
             |||||||||| |||||| | ||||||||||||||||||
Sbjct: 64815 atccccgccgagatccccagccgcttgtccaggcttcc 64852



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  519 bits (262), Expect = e-144
 Identities = 367/398 (92%), Gaps = 3/398 (0%)
 Strand = Plus / Plus

                                                                            
Query: 114      agctagtcagtgaagttgttgaggcatgcgtgtggctcggtggccttggcggcgggcgtt 173
                |||||||  ||||||||||||||||| ||||| |||||||||||||||||||| ||||||
Sbjct: 18292027 agctagttggtgaagttgttgaggcaggcgtggggctcggtggccttggcggctggcgtt 18292086

                                                                            
Query: 174      ggctcgacggtgggggaaggcgggacgggcgtgcagagcagctcctttggcaggtccggg 233
                ||||||||||| ||||| |||||||||||||||||||||||||||   |||||||| |||
Sbjct: 18292087 ggctcgacggtcggggacggcgggacgggcgtgcagagcagctcccgcggcaggtcgggg 18292146

                                                                            
Query: 234      atgcccttgaggtagaaagtgtagaagatcttgaaggggaagacgatctggttgagcttg 293
                ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18292147 atgcccttgaggtagaaggtgtagaagatcttgaaggggaagacgatctggttgagcttg 18292206

                                                                            
Query: 294      acctgcccgtagacgccctcgaagacgccggagcctcctgtgacggcgaggtaggactcc 353
                ||||| |||||| |||| ||||||||||||||||| || |||||||||||||||||||||
Sbjct: 18292207 acctggccgtaggcgccttcgaagacgccggagccgccggtgacggcgaggtaggactcc 18292266

                                                                            
Query: 354      tcgtaggtgaggtagggcccctgcaggctgatgtggcccgtagtcgcccgaagtacatgc 413
                |||||||| ||||| || ||||||| |  ||||||| ||||||||| |||||||| | ||
Sbjct: 18292267 tcgtaggtcaggtacgggccctgcacggagatgtgg-ccgtagtcg-ccgaagtagaagc 18292324

                                                                            
Query: 414      tgtagatggccctcgtagcggtcgccgttgcgctccggcacgtgctggatcaggatgcag 473
                ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18292325 tgtagatgg-cctcgtagcggtcgccgttgcgctccggcacgtgctggatcaggatgcag 18292383

                                                      
Query: 474      atccccgccgtgatcccgatccgcttgtccaggcttcc 511
                |||||||||| |||||| | ||||||||||||||||||
Sbjct: 18292384 atccccgccgagatccccagccgcttgtccaggcttcc 18292421



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>gb|AY488136.1| Zea mays allene oxide cyclase (aoc) mRNA, complete cds
          Length = 717

 Score =  396 bits (200), Expect = e-107
 Identities = 360/408 (88%), Gaps = 4/408 (0%)
 Strand = Plus / Minus

                                                                       
Query: 127 agttgttgaggcatgcgtgtggctcggtggccttggcggcgggcgttggctcgacggtgg 186
           |||||| |||| ||||||| ||||||| |||| |||||||||| || |||||||||||||
Sbjct: 706 agttgtcgagggatgcgtgcggctcggcggccctggcggcgggggtgggctcgacggtgg 647

                                                                       
Query: 187 gggaaggcgggacgggcgtgcagagcagctcctttggcaggtccgggatgcccttgaggt 246
           | || ||||||||||||||||||||||| ||| | ||||||||||||||||||  |||||
Sbjct: 646 gcgacggcgggacgggcgtgcagagcaggtccctgggcaggtccgggatgccccggaggt 587

                                                                       
Query: 247 agaaagtgtagaagatcttgaaggggaagacgatctggttgagcttgacctgcccgtaga 306
           |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 586 agaaggtgtagaagatcttgaaggggaagacgatctggttgagcttgacctggccgtaga 527

                                                                       
Query: 307 cgccctcgaagacgccggagcctcctgtgacggcgaggtaggactcctcgtaggtgaggt 366
           |||||||||||||||||||||| || ||||| || ||||| |||||||||||||| ||||
Sbjct: 526 cgccctcgaagacgccggagccgccggtgaccgccaggtacgactcctcgtaggtcaggt 467

                                                                       
Query: 367 agggcccctgcaggctgatgtggcccgtagtcgcccgaagtacatgctgtagatggccct 426
           | || |||||||    ||||||| ||||||||  |||||||| | ||||||||||| |||
Sbjct: 466 acgggccctgcaccgagatgtgg-ccgtagtc-tccgaagtagaagctgtagatgg-cct 410

                                                                       
Query: 427 cgtagcggtcgccgttgcgctccggcacgtgctggatcaggatgcagatccccgccgtga 486
           ||||||||||||||||||| || || ||||||||||| || | |||||| ||||| ||||
Sbjct: 409 cgtagcggtcgccgttgcggtcggggacgtgctggatgagcacgcagatgcccgcggtga 350

                                                           
Query: 487 tcccgatccgcttgtccaggcttcccgttgtacaccttgttggtgaag 534
             || | |||||||||||||| | ||||||||||||||||||||||||
Sbjct: 349 cgcccagccgcttgtccaggc-tgccgttgtacaccttgttggtgaag 303



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>gb|AY103942.1| Zea mays PCO144933 mRNA sequence
          Length = 1122

 Score =  396 bits (200), Expect = e-107
 Identities = 360/408 (88%), Gaps = 4/408 (0%)
 Strand = Plus / Minus

                                                                       
Query: 127 agttgttgaggcatgcgtgtggctcggtggccttggcggcgggcgttggctcgacggtgg 186
           |||||| |||| ||||||| ||||||| |||| |||||||||| || |||||||||||||
Sbjct: 787 agttgtcgagggatgcgtgcggctcggcggccctggcggcgggggtgggctcgacggtgg 728

                                                                       
Query: 187 gggaaggcgggacgggcgtgcagagcagctcctttggcaggtccgggatgcccttgaggt 246
           | || ||||||||||||||||||||||| ||| | ||||||||||||||||||  |||||
Sbjct: 727 gcgacggcgggacgggcgtgcagagcaggtccctgggcaggtccgggatgccccggaggt 668

                                                                       
Query: 247 agaaagtgtagaagatcttgaaggggaagacgatctggttgagcttgacctgcccgtaga 306
           |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 667 agaaggtgtagaagatcttgaaggggaagacgatctggttgagcttgacctggccgtaga 608

                                                                       
Query: 307 cgccctcgaagacgccggagcctcctgtgacggcgaggtaggactcctcgtaggtgaggt 366
           |||||||||||||||||||||| || ||||| || ||||| |||||||||||||| ||||
Sbjct: 607 cgccctcgaagacgccggagccgccggtgaccgccaggtacgactcctcgtaggtcaggt 548

                                                                       
Query: 367 agggcccctgcaggctgatgtggcccgtagtcgcccgaagtacatgctgtagatggccct 426
           | || |||||||    ||||||| ||||||||  |||||||| | ||||||||||| |||
Sbjct: 547 acgggccctgcaccgagatgtgg-ccgtagtc-tccgaagtagaagctgtagatgg-cct 491

                                                                       
Query: 427 cgtagcggtcgccgttgcgctccggcacgtgctggatcaggatgcagatccccgccgtga 486
           ||||||||||||||||||| || || ||||||||||| || | |||||| ||||| ||||
Sbjct: 490 cgtagcggtcgccgttgcggtcggggacgtgctggatgagcacgcagatgcccgcggtga 431

                                                           
Query: 487 tcccgatccgcttgtccaggcttcccgttgtacaccttgttggtgaag 534
             || | |||||||||||||| | ||||||||||||||||||||||||
Sbjct: 430 cgcccagccgcttgtccaggc-tgccgttgtacaccttgttggtgaag 384



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>gb|BT016725.1| Zea mays clone Contig558 mRNA sequence
          Length = 1071

 Score =  381 bits (192), Expect = e-102
 Identities = 358/408 (87%), Gaps = 4/408 (0%)
 Strand = Plus / Minus

                                                                       
Query: 127 agttgttgaggcatgcgtgtggctcggtggccttggcggcgggcgttggctcgacggtgg 186
           |||||| |||| | ||||| ||||||| |||| |||||||||| || |||||||||||||
Sbjct: 761 agttgtcgagggaggcgtgcggctcggcggccctggcggcgggggtgggctcgacggtgg 702

                                                                       
Query: 187 gggaaggcgggacgggcgtgcagagcagctcctttggcaggtccgggatgcccttgaggt 246
           | || ||||||||||||||||||||||| ||| |||||||||||||||| |||  |||||
Sbjct: 701 gcgacggcgggacgggcgtgcagagcaggtcccttggcaggtccgggattccccggaggt 642

                                                                       
Query: 247 agaaagtgtagaagatcttgaaggggaagacgatctggttgagcttgacctgcccgtaga 306
           |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct: 641 agaaggtgtagaagatcttgaaggggaagacgatctggttgagcttgacctggccgtata 582

                                                                       
Query: 307 cgccctcgaagacgccggagcctcctgtgacggcgaggtaggactcctcgtaggtgaggt 366
           |||||||||||||||||||||| || ||||| || ||||| |||||||||||||| ||||
Sbjct: 581 cgccctcgaagacgccggagccgccggtgaccgccaggtacgactcctcgtaggtcaggt 522

                                                                       
Query: 367 agggcccctgcaggctgatgtggcccgtagtcgcccgaagtacatgctgtagatggccct 426
           | || |||||||    ||||||| ||||||||  |||||||| | ||||||||||| |||
Sbjct: 521 acgggccctgcaccgagatgtgg-ccgtagtc-tccgaagtagaagctgtagatgg-cct 465

                                                                       
Query: 427 cgtagcggtcgccgttgcgctccggcacgtgctggatcaggatgcagatccccgccgtga 486
           ||||||||||||||||||| || || ||||||||||| || | |||||| ||||| ||||
Sbjct: 464 cgtagcggtcgccgttgcggtcggggacgtgctggatgagcacgcagatgcccgcggtga 405

                                                           
Query: 487 tcccgatccgcttgtccaggcttcccgttgtacaccttgttggtgaag 534
             || | |||||||||||||| | ||||||||||||||||||||||||
Sbjct: 404 cgcccagccgcttgtccaggc-tgccgttgtacaccttgttggtgaag 358



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>gb|AY154776.1| Physcomitrella patens allene oxide cyclase (aoc) mRNA, complete cds
          Length = 958

 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 132/159 (83%), Gaps = 1/159 (0%)
 Strand = Plus / Minus

                                                                       
Query: 243 aggtagaaagtgtagaagatcttgaaggggaagacgatctggttgagcttgacctgcccg 302
           |||||||| |||||||||| |||||||||||||| ||||||||  |||||  |||| |||
Sbjct: 598 aggtagaacgtgtagaagagcttgaaggggaagatgatctggtgcagcttcgcctgaccg 539

                                                                       
Query: 303 tagacgccctcgaagacgccggagcctcctgtgacggcgaggtaggactcctcgtaggtg 362
           |||  |||| ||||||  || |||||||| ||||  |||||||| || |||||||| |||
Sbjct: 538 tagcagcccgcgaagatccccgagcctcccgtgatcgcgaggtacgagtcctcgtatgtg 479

                                                  
Query: 363 aggtagggcccctgcaggctgatgtggcccgtagtcgcc 401
           | ||| |||||||| | |  ||||||| |||||||||||
Sbjct: 478 atgtatggcccctgaacggagatgtgg-ccgtagtcgcc 441



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>emb|AJ508993.1|PPA508993 Physcomitrella patens mRNA for allene oxide cyclase (aoc1 gene)
          Length = 779

 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 132/159 (83%), Gaps = 1/159 (0%)
 Strand = Plus / Minus

                                                                       
Query: 243 aggtagaaagtgtagaagatcttgaaggggaagacgatctggttgagcttgacctgcccg 302
           |||||||| |||||||||| |||||||||||||| ||||||||  |||||  |||| |||
Sbjct: 506 aggtagaacgtgtagaagagcttgaaggggaagatgatctggtgcagcttcgcctgaccg 447

                                                                       
Query: 303 tagacgccctcgaagacgccggagcctcctgtgacggcgaggtaggactcctcgtaggtg 362
           |||  |||| ||||||  || |||||||| ||||  |||||||| || |||||||| |||
Sbjct: 446 tagcagcccgcgaagatccccgagcctcccgtgatcgcgaggtacgagtcctcgtatgtg 387

                                                  
Query: 363 aggtagggcccctgcaggctgatgtggcccgtagtcgcc 401
           | ||| |||||||| | |  ||||||| |||||||||||
Sbjct: 386 atgtatggcccctgaacggagatgtgg-ccgtagtcgcc 349



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>gb|DQ314585.1| Ipomoea nil chloroplast allene oxide cyclase precursor (AOC) mRNA,
           complete cds; nuclear gene for chloroplast product
          Length = 856

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 175/218 (80%), Gaps = 3/218 (1%)
 Strand = Plus / Minus

                                                                       
Query: 222 ggcaggtccgggatgcccttgaggtagaaagtgtagaagatcttgaaggggaagacgatc 281
           ||||| || ||||| ||||| | ||||||||||||||| | |||||| ||||| | || |
Sbjct: 660 ggcagatcagggattcccttcaagtagaaagtgtagaacagcttgaacgggaaaatgagc 601

                                                                       
Query: 282 tggttgagcttgacctgcccgtagacgccctcgaagacgccggagcctcctgtgacggcg 341
           || | |||||||||||| ||| |||| || |||||||  || || || || ||||| || 
Sbjct: 600 tgctggagcttgacctgaccggagactccttcgaagatcccagatccgccggtgaccgcc 541

                                                                       
Query: 342 aggtaggactcctcgtaggtgaggtagggcccctgcaggctgatgtggcccgtagtcgcc 401
           |  ||||  |||||||||||||||||  | ||||| | |  ||||||| ||||||||| |
Sbjct: 540 aaataggtgtcctcgtaggtgaggtattgtccctgaacggcgatgtgg-ccgtagtcg-c 483

                                                 
Query: 402 cgaagtacatgctgtagatggccctcgtagcggtcgcc 439
           ||||||| | ||||||||| | ||||||| ||||||||
Sbjct: 482 cgaagtagaagctgtagatcg-cctcgtaacggtcgcc 446



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>gb|AF311437.2|AH010657S2 Comamonas testosteroni plasmid pTSA incP1beta region, partial sequence
             and transposon Tntsa, complete sequence
          Length = 38756

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 277   cgatctggttgagcttgacctg 298
             ||||||||||||||||||||||
Sbjct: 26867 cgatctggttgagcttgacctg 26888



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>gb|AY687339.1| Humulus lupulus allene oxide cyclase C4 mRNA, complete cds
          Length = 1093

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 58/70 (82%)
 Strand = Plus / Minus

                                                                       
Query: 249 aaagtgtagaagatcttgaaggggaagacgatctggttgagcttgacctgcccgtagacg 308
           ||||||||||| | |||||| ||||||| || |||||  ||||| ||||| ||| |||| 
Sbjct: 718 aaagtgtagaaaagcttgaaagggaagatgagctggtgcagcttcacctggccggagacc 659

                     
Query: 309 ccctcgaaga 318
           || |||||||
Sbjct: 658 ccttcgaaga 649



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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 424    cctcgtagcggtcgccgttgcgctc 448
              |||||||||||||||||| ||||||
Sbjct: 910661 cctcgtagcggtcgccgtcgcgctc 910637



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>gb|AY687338.1| Humulus lupulus allene oxide cyclase C1 mRNA, complete cds
          Length = 1099

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 249 aaagtgtagaagatcttgaaggggaaga 276
           ||||||||||| | ||||||||||||||
Sbjct: 716 aaagtgtagaaaagcttgaaggggaaga 689



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>emb|CR457459.9| Zebrafish DNA sequence from clone DKEY-25P11 in linkage group 12,
             complete sequence
          Length = 206901

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 209   gagcagctcctttggcaggt 228
             ||||||||||||||||||||
Sbjct: 78596 gagcagctcctttggcaggt 78615



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>gb|AY135641.1| Solanum tuberosum allene oxide cyclase mRNA, complete cds; nuclear
           gene for chloroplast product
          Length = 741

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 47/56 (83%)
 Strand = Plus / Minus

                                                                   
Query: 221 tggcaggtccgggatgcccttgaggtagaaagtgtagaagatcttgaaggggaaga 276
           |||||| || ||||| ||||| | ||| ||||||||||| | |||||| |||||||
Sbjct: 642 tggcagatcggggatccccttcaagtaaaaagtgtagaatagcttgaaagggaaga 587



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>gb|AC127308.3| Mus musculus BAC clone RP23-293B20 from 8, complete sequence
          Length = 211878

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 361   tgaggtagggcccctgcagg 380
             ||||||||||||||||||||
Sbjct: 76528 tgaggtagggcccctgcagg 76547



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>emb|AL161901.18| Human DNA sequence from clone RP11-521H3 on chromosome 13 Contains a
              novel gene and a eukaryotic translation initiation factor
              4A, variant 1 (EIF4A1) pseudogene, complete sequence
          Length = 150054

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 234    atgcccttgaggtagaaagt 253
              ||||||||||||||||||||
Sbjct: 139797 atgcccttgaggtagaaagt 139778



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>gb|AE005907.1| Caulobacter crescentus CB15 section 233 of 359 of the complete genome
          Length = 8390

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 488  cccgatccgcttgtccaggc 507
            ||||||||||||||||||||
Sbjct: 4893 cccgatccgcttgtccaggc 4912



 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 488  cccgatccgcttgtccaggc 507
            ||||||||||||||||||||
Sbjct: 2317 cccgatccgcttgtccaggc 2336



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>dbj|AB037929.2| Bruguiera sexangula mang-1 mRNA for mangrin, complete cds
          Length = 1019

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 245 gtagaaagtgtagaagatcttgaa 268
           ||||||||||||||||| ||||||
Sbjct: 683 gtagaaagtgtagaagagcttgaa 660



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>gb|AY644677.1| Humulus lupulus plastid allene oxide cyclase mRNA, complete cds;
           nuclear gene for plastid product
          Length = 768

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 249 aaagtgtagaagatcttgaaggggaaga 276
           ||||||||||| | ||||||||||||||
Sbjct: 632 aaagtgtagaaaagcttgaaggggaaga 605


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,484,707
Number of Sequences: 3902068
Number of extensions: 3484707
Number of successful extensions: 63687
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 63518
Number of HSP's gapped (non-prelim): 139
length of query: 534
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 511
effective length of database: 17,143,297,704
effective search space: 8760225126744
effective search space used: 8760225126744
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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