| Clone Name | rbags12c06 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | CALX_SOYBN (Q39817) Calnexin homolog precursor | 106 | 6e-23 | 2 | CALX2_ARATH (Q38798) Calnexin homolog 2 precursor | 94 | 2e-19 | 3 | CALX_PEA (O82709) Calnexin homolog precursor | 92 | 9e-19 | 4 | CALX1_ARATH (P29402) Calnexin homolog 1 precursor | 83 | 7e-16 | 5 | CALX_HELTU (Q39994) Calnexin homolog precursor | 79 | 8e-15 | 6 | SREC2_HUMAN (Q96GP6) Scavenger receptor class F member 2 precurs... | 32 | 1.9 | 7 | KRA56_HUMAN (Q6L8G9) Keratin-associated protein 5-6 (Keratin-ass... | 31 | 3.2 | 8 | ZNF77_HUMAN (Q15935) Zinc finger protein 77 (ZNFpT1) | 30 | 4.2 |
|---|
>CALX_SOYBN (Q39817) Calnexin homolog precursor| Length = 546 Score = 106 bits (264), Expect = 6e-23 Identities = 51/91 (56%), Positives = 61/91 (67%) Frame = -1 Query: 605 EKTWKPKFVVXXXXXXXXXXXXXESEDLSEFQKKIFSVLYKIADIPFLEPYKIKIIDLIE 426 E TWKPKF V S+ +S FQKK+F +LYKIADIPFL +K KI DLIE Sbjct: 407 ETTWKPKFTVEKDKLKAEEEAATGSDGISGFQKKVFDLLYKIADIPFLSEHKSKIFDLIE 466 Query: 425 KGEKQPNITISILASVAVILVTVLFRTIFGG 333 K EKQPN+TI IL +V V+ V++ FR IFGG Sbjct: 467 KAEKQPNLTIGILVAVVVVFVSIFFRLIFGG 497
>CALX2_ARATH (Q38798) Calnexin homolog 2 precursor| Length = 532 Score = 94.4 bits (233), Expect = 2e-19 Identities = 45/112 (40%), Positives = 64/112 (57%) Frame = -1 Query: 605 EKTWKPKFVVXXXXXXXXXXXXXESEDLSEFQKKIFSVLYKIADIPFLEPYKIKIIDLIE 426 + TWKPKF V E++ L +QKK+F +LYK+ADI FL YK KI++LIE Sbjct: 400 QSTWKPKFDVEKEKQKAEDEAAGEADGLKSYQKKVFDLLYKVADISFLSAYKSKIMELIE 459 Query: 425 KGEKQPNITISILASVAVILVTVLFRTIFGGXXXXXXXXXXXXXXXPSATEA 270 K E QPN+TI +L S+ ++ +++ F+ IFGG S +EA Sbjct: 460 KAETQPNLTIGVLISIVIVFLSLFFKLIFGGAKAKVEKKKPETAAETSTSEA 511
>CALX_PEA (O82709) Calnexin homolog precursor| Length = 551 Score = 92.4 bits (228), Expect = 9e-19 Identities = 48/97 (49%), Positives = 60/97 (61%), Gaps = 6/97 (6%) Frame = -1 Query: 605 EKTWKPKFVVXXXX------XXXXXXXXXESEDLSEFQKKIFSVLYKIADIPFLEPYKIK 444 E TWKPKF + ESE ++ QKK F +LYKIADI FL K K Sbjct: 406 ETTWKPKFNIEKEKQKHEEEAAAAAAARSESEGIAGIQKKAFDLLYKIADIAFLSGQKEK 465 Query: 443 IIDLIEKGEKQPNITISILASVAVILVTVLFRTIFGG 333 II++IEKGEKQPN+TI I+ SV ++ V++ FR IFGG Sbjct: 466 IIEIIEKGEKQPNLTIGIIVSVVIVFVSIFFRLIFGG 502
>CALX1_ARATH (P29402) Calnexin homolog 1 precursor| Length = 530 Score = 82.8 bits (203), Expect = 7e-16 Identities = 37/91 (40%), Positives = 55/91 (60%) Frame = -1 Query: 605 EKTWKPKFVVXXXXXXXXXXXXXESEDLSEFQKKIFSVLYKIADIPFLEPYKIKIIDLIE 426 + TWKPKF V ++ L +QK +F +L K+AD+ FL YK KI +LIE Sbjct: 398 QTTWKPKFDVEKEKQKAEEEAAGSADGLKSYQKVVFDLLNKVADLSFLSAYKSKITELIE 457 Query: 425 KGEKQPNITISILASVAVILVTVLFRTIFGG 333 K E+QPN+TI +L ++ V+ ++ + IFGG Sbjct: 458 KAEQQPNLTIGVLVAIVVVFFSLFLKLIFGG 488
>CALX_HELTU (Q39994) Calnexin homolog precursor| Length = 540 Score = 79.3 bits (194), Expect = 8e-15 Identities = 33/66 (50%), Positives = 50/66 (75%) Frame = -1 Query: 530 EDLSEFQKKIFSVLYKIADIPFLEPYKIKIIDLIEKGEKQPNITISILASVAVILVTVLF 351 + L QK +F VLYKIAD+PFL +K+K+++LIEK E QPNITI ++ S+ V++ ++L Sbjct: 426 DGLKGIQKAVFDVLYKIADLPFLGDHKVKVLELIEKAETQPNITIGVIVSIIVVIFSILL 485 Query: 350 RTIFGG 333 + +FGG Sbjct: 486 KLLFGG 491
>SREC2_HUMAN (Q96GP6) Scavenger receptor class F member 2 precursor (Scavenger| receptor expressed by endothelial cells 2 protein) (SREC-II) (SRECRP-1) Length = 866 Score = 31.6 bits (70), Expect = 1.9 Identities = 14/46 (30%), Positives = 20/46 (43%), Gaps = 4/46 (8%) Frame = -3 Query: 390 FGLSCCHPCYCALQNHFRWQEGSGTCEA----RCCGEEAQCHGSRC 265 +G C CYC+ + Q G+ C A R C + C+ S C Sbjct: 177 WGAQCASACYCSATSRCDPQTGACLCHAGWWGRSCNNQCACNSSPC 222
>KRA56_HUMAN (Q6L8G9) Keratin-associated protein 5-6 (Keratin-associated protein| 5.6) (Ultrahigh sulfur keratin-associated protein 5.6) Length = 129 Score = 30.8 bits (68), Expect = 3.2 Identities = 12/28 (42%), Positives = 15/28 (53%) Frame = -3 Query: 381 SCCHPCYCALQNHFRWQEGSGTCEARCC 298 SCC PCYC+ GS C++ CC Sbjct: 89 SCCKPCYCSSGC------GSSCCQSSCC 110
>ZNF77_HUMAN (Q15935) Zinc finger protein 77 (ZNFpT1)| Length = 545 Score = 30.4 bits (67), Expect = 4.2 Identities = 10/32 (31%), Positives = 17/32 (53%) Frame = -3 Query: 366 CYCALQNHFRWQEGSGTCEARCCGEEAQCHGS 271 CY + ++H R G C+ + CG+ C+ S Sbjct: 307 CYSSFRDHVRTHTGEKPCQCKHCGKAFTCYSS 338 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 61,009,624 Number of Sequences: 219361 Number of extensions: 985275 Number of successful extensions: 3060 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 2924 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3054 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5367617986 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)