ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags12b24 |
|---|---|
| Clone Library Name | barley_pub |
>TIP1_MOUSE (Q9CR47) TGF-beta-inducible nuclear protein 1 (L-name-related| protein 42) (LNR42) Length = 260 Score = 191 bits (486), Expect(2) = 1e-52 Identities = 90/110 (81%), Positives = 98/110 (89%) Frame = -1 Query: 540 TKATFVGPGFTRKPPKYERFIRPTGLRFTKAHVTHPELKCTFNLDIISVKKNPNGPMYTS 361 TK FVG GFTRKPPKYERFIRP GLRF KAHVTHPELK TF L I+ VKKNP+ P+YT+ Sbjct: 151 TKVCFVGDGFTRKPPKYERFIRPMGLRFKKAHVTHPELKATFCLPILGVKKNPSSPLYTT 210 Query: 360 LGVMTRGTIIEVNVSELGLVTPAGKVVWGKYAQVTNNPENDGCINAVLLV 211 LGV+T+GT+IEVNVSELGLVT GKV+WGKYAQVTNNPENDGCINAVLLV Sbjct: 211 LGVITKGTVIEVNVSELGLVTQGGKVIWGKYAQVTNNPENDGCINAVLLV 260 Score = 35.0 bits (79), Expect(2) = 1e-52 Identities = 15/22 (68%), Positives = 17/22 (77%) Frame = -2 Query: 599 EMFKVLRTGKRKTKQWKRMELK 534 E+ KV+RTGKRK K WKRM K Sbjct: 131 EVLKVIRTGKRKKKAWKRMVTK 152
>TIP1_HUMAN (O95478) TGF-beta-inducible nuclear protein 1 (Hairy cell leukemia| protein 1) Length = 260 Score = 191 bits (486), Expect(2) = 1e-52 Identities = 90/110 (81%), Positives = 98/110 (89%) Frame = -1 Query: 540 TKATFVGPGFTRKPPKYERFIRPTGLRFTKAHVTHPELKCTFNLDIISVKKNPNGPMYTS 361 TK FVG GFTRKPPKYERFIRP GLRF KAHVTHPELK TF L I+ VKKNP+ P+YT+ Sbjct: 151 TKVCFVGDGFTRKPPKYERFIRPMGLRFKKAHVTHPELKATFCLPILGVKKNPSSPLYTT 210 Query: 360 LGVMTRGTIIEVNVSELGLVTPAGKVVWGKYAQVTNNPENDGCINAVLLV 211 LGV+T+GT+IEVNVSELGLVT GKV+WGKYAQVTNNPENDGCINAVLLV Sbjct: 211 LGVITKGTVIEVNVSELGLVTQGGKVIWGKYAQVTNNPENDGCINAVLLV 260 Score = 35.0 bits (79), Expect(2) = 1e-52 Identities = 15/22 (68%), Positives = 17/22 (77%) Frame = -2 Query: 599 EMFKVLRTGKRKTKQWKRMELK 534 E+ KV+RTGKRK K WKRM K Sbjct: 131 EVLKVIRTGKRKKKAWKRMVTK 152
>TIP1_BOVIN (Q3SX11) TGF-beta-inducible nuclear protein 1| Length = 260 Score = 191 bits (486), Expect(2) = 1e-52 Identities = 90/110 (81%), Positives = 98/110 (89%) Frame = -1 Query: 540 TKATFVGPGFTRKPPKYERFIRPTGLRFTKAHVTHPELKCTFNLDIISVKKNPNGPMYTS 361 TK FVG GFTRKPPKYERFIRP GLRF KAHVTHPELK TF L I+ VKKNP+ P+YT+ Sbjct: 151 TKVCFVGDGFTRKPPKYERFIRPMGLRFKKAHVTHPELKATFCLPILGVKKNPSSPLYTT 210 Query: 360 LGVMTRGTIIEVNVSELGLVTPAGKVVWGKYAQVTNNPENDGCINAVLLV 211 LGV+T+GT+IEVNVSELGLVT GKV+WGKYAQVTNNPENDGCINAVLLV Sbjct: 211 LGVITKGTVIEVNVSELGLVTQGGKVIWGKYAQVTNNPENDGCINAVLLV 260 Score = 35.0 bits (79), Expect(2) = 1e-52 Identities = 15/22 (68%), Positives = 17/22 (77%) Frame = -2 Query: 599 EMFKVLRTGKRKTKQWKRMELK 534 E+ KV+RTGKRK K WKRM K Sbjct: 131 EVLKVIRTGKRKKKAWKRMVTK 152
>TIP1_RAT (Q9QYU7) TGF-beta-inducible nuclear protein 1 (Protein CDK105)| Length = 260 Score = 190 bits (483), Expect(2) = 4e-52 Identities = 89/110 (80%), Positives = 98/110 (89%) Frame = -1 Query: 540 TKATFVGPGFTRKPPKYERFIRPTGLRFTKAHVTHPELKCTFNLDIISVKKNPNGPMYTS 361 TK FVG GFTRKPPKYE+FIRP GLRF KAHVTHPELK TF L I+ VKKNP+ P+YT+ Sbjct: 151 TKVCFVGDGFTRKPPKYEKFIRPMGLRFKKAHVTHPELKATFCLPILGVKKNPSSPLYTT 210 Query: 360 LGVMTRGTIIEVNVSELGLVTPAGKVVWGKYAQVTNNPENDGCINAVLLV 211 LGV+T+GT+IEVNVSELGLVT GKV+WGKYAQVTNNPENDGCINAVLLV Sbjct: 211 LGVITKGTVIEVNVSELGLVTQGGKVIWGKYAQVTNNPENDGCINAVLLV 260 Score = 34.3 bits (77), Expect(2) = 4e-52 Identities = 14/22 (63%), Positives = 17/22 (77%) Frame = -2 Query: 599 EMFKVLRTGKRKTKQWKRMELK 534 E+ KV+RTGKRK K W+RM K Sbjct: 131 ELLKVIRTGKRKKKAWRRMVTK 152
>YEV6_YEAST (P40078) Hypothetical 29.7 kDa protein in RSP5-LCP5 intergenic| region Length = 261 Score = 164 bits (416), Expect(2) = 1e-44 Identities = 80/110 (72%), Positives = 90/110 (81%) Frame = -1 Query: 540 TKATFVGPGFTRKPPKYERFIRPTGLRFTKAHVTHPELKCTFNLDIISVKKNPNGPMYTS 361 TK TFVG GFTR+P K ER IRP+ LR KA+VTHPEL T L I++VKKNP PMYT Sbjct: 152 TKHTFVGEGFTRRPVKMERIIRPSALRQKKANVTHPELGVTVFLPILAVKKNPQSPMYTQ 211 Query: 360 LGVMTRGTIIEVNVSELGLVTPAGKVVWGKYAQVTNNPENDGCINAVLLV 211 LGV+T+GTIIEVNVSELG+VT GKVVWGKYAQVTN P+ DGC+NAVLLV Sbjct: 212 LGVLTKGTIIEVNVSELGMVTAGGKVVWGKYAQVTNEPDRDGCVNAVLLV 261 Score = 35.0 bits (79), Expect(2) = 1e-44 Identities = 14/22 (63%), Positives = 18/22 (81%) Frame = -2 Query: 599 EMFKVLRTGKRKTKQWKRMELK 534 EMFKV++TGK ++K WKRM K Sbjct: 132 EMFKVIKTGKSRSKSWKRMITK 153
>RS8E_PICTO (Q6L0D3) 30S ribosomal protein S8e| Length = 125 Score = 48.1 bits (113), Expect = 2e-05 Identities = 36/109 (33%), Positives = 50/109 (45%), Gaps = 7/109 (6%) Frame = -1 Query: 519 PGFTRKPPKYERFIRPTG-------LRFTKAHVTHPELKCTFNLDIISVKKNPNGPMYTS 361 P TR + R IR G LR A+V +P+ K T + I +VK+N P Y Sbjct: 32 PTLTRLGDRELRKIRSYGGNSKFALLRCDYANVYNPKDKTTRKVKINTVKENSADPHYVQ 91 Query: 360 LGVMTRGTIIEVNVSELGLVTPAGKVVWGKYAQVTNNPENDGCINAVLL 214 +M RGT+I + + A++T+ P DG INAVLL Sbjct: 92 RNIMNRGTVISTELGD---------------ARITSRPGQDGVINAVLL 125
>RS8E_SULAC (Q4JAP5) 30S ribosomal protein S8e| Length = 128 Score = 42.0 bits (97), Expect = 0.001 Identities = 28/79 (35%), Positives = 42/79 (53%) Frame = -1 Query: 450 AHVTHPELKCTFNLDIISVKKNPNGPMYTSLGVMTRGTIIEVNVSELGLVTPAGKVVWGK 271 A+V P+ K + IISV ++P Y G++ +GT+I+ +ELG Sbjct: 63 ANVYDPQSKTAKKVKIISVLESPANREYARRGIIVKGTLIQ---TELG------------ 107 Query: 270 YAQVTNNPENDGCINAVLL 214 A+VT+ P DG INA+LL Sbjct: 108 KAKVTSRPGQDGIINALLL 126
>RS8E_METKA (Q8TV55) 30S ribosomal protein S8e| Length = 133 Score = 41.2 bits (95), Expect = 0.002 Identities = 32/86 (37%), Positives = 43/86 (50%), Gaps = 1/86 (1%) Frame = -1 Query: 468 GLRF-TKAHVTHPELKCTFNLDIISVKKNPNGPMYTSLGVMTRGTIIEVNVSELGLVTPA 292 GL+F T A+V PE + I V KNP Y GV+T+G II +E+GL Sbjct: 56 GLKFATHANVADPETGEVKCVRIEEVVKNPASQYYERHGVITKGAIIR---TEIGL---- 108 Query: 291 GKVVWGKYAQVTNNPENDGCINAVLL 214 A+VTN P + +NAVL+ Sbjct: 109 --------AKVTNRPGQEPVVNAVLI 126
>RS8E_METJA (P54055) 30S ribosomal protein S8e| Length = 129 Score = 40.8 bits (94), Expect = 0.003 Identities = 27/79 (34%), Positives = 41/79 (51%) Frame = -1 Query: 450 AHVTHPELKCTFNLDIISVKKNPNGPMYTSLGVMTRGTIIEVNVSELGLVTPAGKVVWGK 271 A+V PE + II+V++N Y V+T+G IIE +E+GL Sbjct: 64 ANVLDPETGTCKKVKIITVRENKANIHYVRRNVITKGAIIE---TEIGL----------- 109 Query: 270 YAQVTNNPENDGCINAVLL 214 A+VT+ P DG +NA+L+ Sbjct: 110 -AKVTSRPGQDGTVNAILI 127
>RS8E_SULTO (Q976K3) 30S ribosomal protein S8e| Length = 128 Score = 39.7 bits (91), Expect = 0.007 Identities = 26/81 (32%), Positives = 41/81 (50%) Frame = -1 Query: 456 TKAHVTHPELKCTFNLDIISVKKNPNGPMYTSLGVMTRGTIIEVNVSELGLVTPAGKVVW 277 T A++ P+ K + I+SV + P Y G++ +G+II+ T GK Sbjct: 61 TFANIYDPQEKVSKKAKILSVIETPANKEYARRGIIVKGSIIQ---------TELGK--- 108 Query: 276 GKYAQVTNNPENDGCINAVLL 214 A+VT+ P DG INA+L+ Sbjct: 109 ---AKVTSRPGQDGTINAILI 126
>RS8E_ARCFU (O28130) 30S ribosomal protein S8e| Length = 125 Score = 38.1 bits (87), Expect = 0.020 Identities = 24/79 (30%), Positives = 38/79 (48%) Frame = -1 Query: 450 AHVTHPELKCTFNLDIISVKKNPNGPMYTSLGVMTRGTIIEVNVSELGLVTPAGKVVWGK 271 A+V P+ ++I SV +NP Y V+T+G II ++ + Sbjct: 61 ANVYDPKQGKVVRVEIESVVENPAHVHYARRNVITKGAIIATSIGK-------------- 106 Query: 270 YAQVTNNPENDGCINAVLL 214 A+VTN P +G +NAVL+ Sbjct: 107 -ARVTNRPSQEGVVNAVLI 124
>RS8E_THEVO (Q97BA2) 30S ribosomal protein S8e| Length = 127 Score = 37.7 bits (86), Expect = 0.026 Identities = 23/64 (35%), Positives = 30/64 (46%) Frame = -1 Query: 405 IISVKKNPNGPMYTSLGVMTRGTIIEVNVSELGLVTPAGKVVWGKYAQVTNNPENDGCIN 226 II+VK+NP Y ++ +GTII + E A VT+ P DG IN Sbjct: 78 IITVKENPANSHYVQRNIINKGTIISTEIGE---------------AIVTSRPGQDGVIN 122 Query: 225 AVLL 214 A LL Sbjct: 123 AKLL 126
>RS8E_NANEQ (P61301) 30S ribosomal protein S8e| Length = 127 Score = 36.6 bits (83), Expect = 0.057 Identities = 30/109 (27%), Positives = 47/109 (43%), Gaps = 7/109 (6%) Frame = -1 Query: 519 PGFTRKPPKYERFIRPTG-------LRFTKAHVTHPELKCTFNLDIISVKKNPNGPMYTS 361 P FTR + + IR G R +V P T I+ NP+ + Sbjct: 33 PTFTRVGERKIKKIRVRGGNIKIRLKRDMYVNVYDPTQGKTVKAKIVRFLDNPSNRNFAR 92 Query: 360 LGVMTRGTIIEVNVSELGLVTPAGKVVWGKYAQVTNNPENDGCINAVLL 214 +G++T+G I+E +ELG V ++T+ P DG +N VL+ Sbjct: 93 MGILTKGAIVE---TELGKV------------KITSRPGQDGVLNGVLI 126
>RS8E_METMA (Q8PVC6) 30S ribosomal protein S8e| Length = 125 Score = 36.6 bits (83), Expect = 0.057 Identities = 26/84 (30%), Positives = 40/84 (47%) Frame = -1 Query: 465 LRFTKAHVTHPELKCTFNLDIISVKKNPNGPMYTSLGVMTRGTIIEVNVSELGLVTPAGK 286 L+ A++T+P+ T I +V N Y ++T+G++I TP G Sbjct: 56 LQSNVANITNPKDGKTVTATIETVIDNTANKHYVRRNILTKGSVIR---------TPVGT 106 Query: 285 VVWGKYAQVTNNPENDGCINAVLL 214 A+VT+ P DG INAVL+ Sbjct: 107 ------ARVTSRPGQDGVINAVLI 124
>RS8E_PYRHO (O58830) 30S ribosomal protein S8e| Length = 127 Score = 36.2 bits (82), Expect = 0.074 Identities = 20/64 (31%), Positives = 31/64 (48%) Frame = -1 Query: 405 IISVKKNPNGPMYTSLGVMTRGTIIEVNVSELGLVTPAGKVVWGKYAQVTNNPENDGCIN 226 II V +NP + ++T+G IIE + + A+VT+ P DG +N Sbjct: 77 IIRVLENPANRQFARRNIITKGAIIETEIGK---------------AKVTSRPGQDGVVN 121 Query: 225 AVLL 214 A+LL Sbjct: 122 AILL 125
>RS8E_PYRKO (Q5JGF3) 30S ribosomal protein S8e| Length = 130 Score = 36.2 bits (82), Expect = 0.074 Identities = 22/64 (34%), Positives = 32/64 (50%) Frame = -1 Query: 405 IISVKKNPNGPMYTSLGVMTRGTIIEVNVSELGLVTPAGKVVWGKYAQVTNNPENDGCIN 226 I++V +NP Y ++T+G IIE T GK + VT+ P DG +N Sbjct: 77 ILNVVENPANRQYARRNIITKGAIIE---------TEIGKAI------VTSRPGQDGVVN 121 Query: 225 AVLL 214 AVL+ Sbjct: 122 AVLI 125
>RS8E_PYRFU (Q8U1Y5) 30S ribosomal protein S8e| Length = 127 Score = 35.8 bits (81), Expect = 0.097 Identities = 20/64 (31%), Positives = 31/64 (48%) Frame = -1 Query: 405 IISVKKNPNGPMYTSLGVMTRGTIIEVNVSELGLVTPAGKVVWGKYAQVTNNPENDGCIN 226 II V +NP + ++T+G IIE + + A+VT+ P DG +N Sbjct: 77 IIRVIENPANRQFARRNIITKGAIIETEIGK---------------AKVTSRPGQDGVVN 121 Query: 225 AVLL 214 A+LL Sbjct: 122 AILL 125
>RS8E_PYRAB (Q9UZL4) 30S ribosomal protein S8e| Length = 127 Score = 35.8 bits (81), Expect = 0.097 Identities = 20/64 (31%), Positives = 31/64 (48%) Frame = -1 Query: 405 IISVKKNPNGPMYTSLGVMTRGTIIEVNVSELGLVTPAGKVVWGKYAQVTNNPENDGCIN 226 II V +NP + ++T+G IIE + + A+VT+ P DG +N Sbjct: 77 IIRVIENPANRQFARRNIITKGAIIETEIGK---------------AKVTSRPGQDGVVN 121 Query: 225 AVLL 214 A+LL Sbjct: 122 AILL 125
>RS8E_THEAC (Q9HJD0) 30S ribosomal protein S8e| Length = 127 Score = 35.4 bits (80), Expect = 0.13 Identities = 21/64 (32%), Positives = 29/64 (45%) Frame = -1 Query: 405 IISVKKNPNGPMYTSLGVMTRGTIIEVNVSELGLVTPAGKVVWGKYAQVTNNPENDGCIN 226 II+VK NP Y ++ +GT+I + + A VT+ P DG IN Sbjct: 78 IITVKANPANSHYVQRNIINKGTVIATEIGD---------------AVVTSRPGQDGVIN 122 Query: 225 AVLL 214 A LL Sbjct: 123 AKLL 126
>RS8E_HALMA (P49402) 30S ribosomal protein S8e (HS23)| Length = 123 Score = 34.7 bits (78), Expect = 0.22 Identities = 20/69 (28%), Positives = 33/69 (47%) Frame = -1 Query: 420 TFNLDIISVKKNPNGPMYTSLGVMTRGTIIEVNVSELGLVTPAGKVVWGKYAQVTNNPEN 241 T I +V +NP+ P Y ++T+G I+E + + A+VT+ P Sbjct: 69 TIEATIENVVENPSNPNYARRNIITKGAILETSEGQ---------------ARVTSRPGQ 113 Query: 240 DGCINAVLL 214 G +NAVL+ Sbjct: 114 HGQVNAVLV 122
>RS8E_METAC (Q8TS82) 30S ribosomal protein S8e| Length = 125 Score = 34.7 bits (78), Expect = 0.22 Identities = 23/84 (27%), Positives = 39/84 (46%) Frame = -1 Query: 465 LRFTKAHVTHPELKCTFNLDIISVKKNPNGPMYTSLGVMTRGTIIEVNVSELGLVTPAGK 286 L+ A+VT+P+ T I +V N Y ++T+G++I ++ Sbjct: 56 LQSNVANVTNPKDGKTVTAPIETVIDNTANKHYVRRNILTKGSVIRTSMGT--------- 106 Query: 285 VVWGKYAQVTNNPENDGCINAVLL 214 A+VT+ P DG +NAVL+ Sbjct: 107 ------ARVTSRPGQDGVVNAVLI 124
>RS8E_PYRAE (Q8ZTB8) 30S ribosomal protein S8e| Length = 131 Score = 33.9 bits (76), Expect = 0.37 Identities = 22/79 (27%), Positives = 36/79 (45%) Frame = -1 Query: 450 AHVTHPELKCTFNLDIISVKKNPNGPMYTSLGVMTRGTIIEVNVSELGLVTPAGKVVWGK 271 A+V P+ + + IIS+ P P + + +G++I+ V + Sbjct: 67 ANVYIPKERKSVKAKIISIISTPANPDFARRNFIVKGSVIQTEVGK-------------- 112 Query: 270 YAQVTNNPENDGCINAVLL 214 A VT+ P DG INAVL+ Sbjct: 113 -ALVTSRPGQDGVINAVLI 130
>RS8E_METMP (P61300) 30S ribosomal protein S8e| Length = 128 Score = 32.7 bits (73), Expect = 0.82 Identities = 23/64 (35%), Positives = 30/64 (46%) Frame = -1 Query: 405 IISVKKNPNGPMYTSLGVMTRGTIIEVNVSELGLVTPAGKVVWGKYAQVTNNPENDGCIN 226 + +V N Y VMT+G IIE T GK A+VT+ P DG +N Sbjct: 78 VTNVIDNKANKHYIRRNVMTKGAIIE---------TEMGK------AKVTSRPGQDGVVN 122 Query: 225 AVLL 214 A+LL Sbjct: 123 AILL 126
>PER_DROPS (P12348) Period circadian protein| Length = 1241 Score = 32.7 bits (73), Expect = 0.82 Identities = 27/79 (34%), Positives = 36/79 (45%), Gaps = 3/79 (3%) Frame = +2 Query: 101 GSIPKTSMNCNTDKIALVRPDTNSALIPSTRIVSKLHTSKTALIQPSFSG---LFVT*AY 271 G+ PK N+ + P+ A IP V HT+ TA+ Q SFS LF T Y Sbjct: 940 GNKPKQQPTLNSVGVGTGAPE---APIPP---VHPTHTTHTAIAQSSFSAQQSLFPTFYY 993 Query: 272 LPQTTFPAGVTRPSSLTFT 328 +P T A P +L+ T Sbjct: 994 IPATPLAASTPAPGALSPT 1012
>RS8E_SULSO (Q980W3) 30S ribosomal protein S8e| Length = 133 Score = 32.0 bits (71), Expect = 1.4 Identities = 25/81 (30%), Positives = 34/81 (41%) Frame = -1 Query: 456 TKAHVTHPELKCTFNLDIISVKKNPNGPMYTSLGVMTRGTIIEVNVSELGLVTPAGKVVW 277 T A+V P + I+ + + P G++ RG I +E GL Sbjct: 61 TTANVLDPATNTAKKVKILEILETPANKELARRGIIIRGAKIR---TEAGL--------- 108 Query: 276 GKYAQVTNNPENDGCINAVLL 214 A VT+ P DG INAVLL Sbjct: 109 ---AVVTSRPGQDGVINAVLL 126
>CATA_ASPFU (P78574) Catalase A (EC 1.11.1.6) (Fast catalase)| Length = 750 Score = 31.6 bits (70), Expect = 1.8 Identities = 14/31 (45%), Positives = 17/31 (54%) Frame = -1 Query: 579 YWQEENQAVEENGTKATFVGPGFTRKPPKYE 487 YW +AV GTK + VG GFT P + E Sbjct: 424 YWPNRFEAVPPTGTKGSGVGGGFTTYPQRVE 454
>PER_DROME (P07663) Period circadian protein (Clock-6 protein) (CLK-6)| Length = 1224 Score = 31.6 bits (70), Expect = 1.8 Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 2/43 (4%) Frame = +2 Query: 185 STRIVSKLHTSKTALIQPSFS--GLFVT*AYLPQTTFPAGVTR 307 S I +H++ TA+ Q SFS GLF T Y+P + P TR Sbjct: 942 SVGITPPVHSTHTAMAQSSFSSAGLFPTFYYIPASLTPTSPTR 984
>PER_DROYA (Q24767) Period circadian protein| Length = 1208 Score = 31.6 bits (70), Expect = 1.8 Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 2/43 (4%) Frame = +2 Query: 185 STRIVSKLHTSKTALIQPSFS--GLFVT*AYLPQTTFPAGVTR 307 S I +H++ TA+ Q SFS GLF T Y+P + P TR Sbjct: 923 SVGITPPVHSTHTAMAQSSFSSAGLFPTFYYIPASLTPTSPTR 965
>TOP2_ASFM2 (P34203) DNA topoisomerase 2 (EC 5.99.1.3) (DNA topoisomerase II)| Length = 1191 Score = 30.8 bits (68), Expect = 3.1 Identities = 15/59 (25%), Positives = 31/59 (52%), Gaps = 1/59 (1%) Frame = -1 Query: 393 KKNPNGPMYTSLGVMTRGTIIEVNVSEL-GLVTPAGKVVWGKYAQVTNNPENDGCINAV 220 K NP+GP + G+++ G +I ++ + T +G+ + + Q+TNN G + + Sbjct: 453 KSNPSGPSFDFCGMISLGGVIMNACKKVTNITTDSGETIMVRNEQLTNNKVLQGIVQVL 511
>TOP2_ASFB7 (Q00942) DNA topoisomerase 2 (EC 5.99.1.3) (DNA topoisomerase II)| Length = 1192 Score = 30.8 bits (68), Expect = 3.1 Identities = 15/59 (25%), Positives = 31/59 (52%), Gaps = 1/59 (1%) Frame = -1 Query: 393 KKNPNGPMYTSLGVMTRGTIIEVNVSEL-GLVTPAGKVVWGKYAQVTNNPENDGCINAV 220 K NP+GP + G+++ G +I ++ + T +G+ + + Q+TNN G + + Sbjct: 454 KSNPSGPSFDFCGMISLGGVIMNACKKVTNITTDSGETIMVRNEQLTNNKVLQGIVQVL 512
>PGPLA_DROME (Q95T64) Peptidoglycan-recognition protein-LA| Length = 368 Score = 30.0 bits (66), Expect = 5.3 Identities = 22/78 (28%), Positives = 34/78 (43%) Frame = +2 Query: 203 KLHTSKTALIQPSFSGLFVT*AYLPQTTFPAGVTRPSSLTFTSIIVPLVITPREVYIGPF 382 +LH +A S SGL LPQ F +PSS+ + +VI P Y GP Sbjct: 28 RLHNLTSAGSSTSSSGL-----PLPQNIFTNPAIQPSSVINLNHSTDVVIGPMTQYQGPV 82 Query: 383 GFFFTEIMSRLNVHFSSG 436 ++ + M + ++G Sbjct: 83 SIYYMDYMEAHAMQTAAG 100
>ATS19_HUMAN (Q8TE59) ADAMTS-19 precursor (EC 3.4.24.-) (A disintegrin and| metalloproteinase with thrombospondin motifs 19) (ADAM-TS 19) (ADAM-TS19) Length = 1207 Score = 30.0 bits (66), Expect = 5.3 Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 4/71 (5%) Frame = +1 Query: 331 DNCSPRHNTKRSVHWTVWVFLHRNYVEVERTFQFRVSHMSLGETQTSRSDEPLILW---- 498 + S + T +H V +F +NY +++ + L E Q+S++ EPL +W Sbjct: 867 EKISAKGPTTAPLHLLVLLFQDQNY---GLHYEYTIPSDPLPENQSSKAPEPLFMWTHTS 923 Query: 499 WLPCKSRANKG 531 W C + G Sbjct: 924 WEDCDATCGGG 934
>WRK46_ARATH (Q9SKD9) Probable WRKY transcription factor 46 (WRKY DNA-binding| protein 46) Length = 295 Score = 29.6 bits (65), Expect = 6.9 Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 4/72 (5%) Frame = +1 Query: 163 YKQCTHPFNQNCIKASHEQDSIDTAIILRVICNLSVFAPNNFSSRGYETKF----TNIHL 330 Y +CTH F Q+C+ Q S DT L + L NN +S T F TN ++ Sbjct: 126 YYRCTHRFTQDCLAVKQVQKS-DTDPSLFEVKYLGNHTCNNITSPKTTTNFSVSLTNTNI 184 Query: 331 DNCSPRHNTKRS 366 + H T++S Sbjct: 185 FEGNRVHVTEQS 196
>TAB2_HUMAN (Q9NYJ8) Mitogen-activated protein kinase kinase kinase| 7-interacting protein 2 (TAK1-binding protein 2) Length = 693 Score = 29.6 bits (65), Expect = 6.9 Identities = 20/71 (28%), Positives = 28/71 (39%) Frame = -1 Query: 558 AVEENGTKATFVGPGFTRKPPKYERFIRPTGLRFTKAHVTHPELKCTFNLDIISVKKNPN 379 A N + +GP F P R I + VT P K TF + + +PN Sbjct: 417 AASRNMSGQVSMGPAFIHHHPPKSRAIGNNSATSPRVVVTQPNTKYTFKITV-----SPN 471 Query: 378 GPMYTSLGVMT 346 P S GV++ Sbjct: 472 KPPAVSPGVVS 482
>RS8E_HALSA (Q9HPE9) 30S ribosomal protein S8e| Length = 124 Score = 29.3 bits (64), Expect = 9.1 Identities = 21/61 (34%), Positives = 27/61 (44%) Frame = -1 Query: 405 IISVKKNPNGPMYTSLGVMTRGTIIEVNVSELGLVTPAGKVVWGKYAQVTNNPENDGCIN 226 I V N P Y ++T+G IIE T AG A+VT+ P DG +N Sbjct: 74 IEDVSANDANPNYARRNIITKGAIIE---------TDAGT------ARVTSRPGQDGQVN 118 Query: 225 A 223 A Sbjct: 119 A 119
>MDN1_HUMAN (Q9NU22) Midasin (MIDAS-containing protein)| Length = 5596 Score = 29.3 bits (64), Expect = 9.1 Identities = 32/135 (23%), Positives = 51/135 (37%), Gaps = 10/135 (7%) Frame = +1 Query: 202 KASHEQDSIDTAIILRVICNLSVFAPNNFSSRGYETKFTNIHLDNCSPRHNTKRSVHWTV 381 KA +++ A+ LR +L + + R E ++ LDN RH K + HW Sbjct: 3783 KAQDWEENASRALSLRK--HLDLISQMIIRWRKLELNCWSMSLDNTMKRHTEKSTKHWF- 3839 Query: 382 WVFLHRNYVEVERTFQFRVSHMSLGETQTSRSDEPLILWWLPCKSRANKGGFS------- 540 +Q HM +T+ D+ + L L +A G S Sbjct: 3840 ------------SIYQMLEKHMQ-EQTEEQEDDKQMTLMLLVSTLQAFIEGSSLGEFHVR 3886 Query: 541 ---SILFHCLVFLLP 576 ++FHC V L+P Sbjct: 3887 LQMLLVFHCHVLLMP 3901
>ARFE_ARATH (P93024) Auxin response factor 5 (Transcription factor MONOPTEROS)| (Auxin-responsive protein IAA24) Length = 902 Score = 29.3 bits (64), Expect = 9.1 Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 2/81 (2%) Frame = +1 Query: 187 NQNCIKASHEQDSIDTAIILRVICNLSVFAPNNF--SSRGYETKFTNIHLDNCSPRHNTK 360 N N A Q I +A + F+ +F +S G T +N+ D+CS R N+K Sbjct: 725 NNNTSFAQDVQSQITSASF----ADSQAFSRQDFPDNSGGTGTSSSNVDFDDCSLRQNSK 780 Query: 361 RSVHWTVWVFLHRNYVEVERT 423 S + R Y +V++T Sbjct: 781 GSSWQKIATPRVRTYTKVQKT 801
>TAB2_RAT (Q5U303) Mitogen-activated protein kinase kinase kinase| 7-interacting protein 2 Length = 693 Score = 29.3 bits (64), Expect = 9.1 Identities = 19/71 (26%), Positives = 28/71 (39%) Frame = -1 Query: 558 AVEENGTKATFVGPGFTRKPPKYERFIRPTGLRFTKAHVTHPELKCTFNLDIISVKKNPN 379 A N + +GP F P R + + VT P K TF + + +PN Sbjct: 417 AASRNMSGQVSMGPAFIHHHPPKSRVLGGNSAASPRVVVTQPNTKYTFKITV-----SPN 471 Query: 378 GPMYTSLGVMT 346 P S GV++ Sbjct: 472 KPPAVSPGVVS 482
>TAB2_MOUSE (Q99K90) Mitogen-activated protein kinase kinase kinase| 7-interacting protein 2 (TAK1-binding protein 2) (TAB2) Length = 693 Score = 29.3 bits (64), Expect = 9.1 Identities = 19/71 (26%), Positives = 28/71 (39%) Frame = -1 Query: 558 AVEENGTKATFVGPGFTRKPPKYERFIRPTGLRFTKAHVTHPELKCTFNLDIISVKKNPN 379 A N + +GP F P R + + VT P K TF + + +PN Sbjct: 417 AASRNMSGQVSMGPAFIHHHPPKSRVLGGNSATSPRVVVTQPNTKYTFKITV-----SPN 471 Query: 378 GPMYTSLGVMT 346 P S GV++ Sbjct: 472 KPPAVSPGVVS 482
>RS8E_AERPE (Q9YDY0) 30S ribosomal protein S8e| Length = 136 Score = 29.3 bits (64), Expect = 9.1 Identities = 21/79 (26%), Positives = 36/79 (45%) Frame = -1 Query: 450 AHVTHPELKCTFNLDIISVKKNPNGPMYTSLGVMTRGTIIEVNVSELGLVTPAGKVVWGK 271 A V++P+ I+ + + P Y G++ +G +I+ T G+ V Sbjct: 66 AVVSNPKTGEARKARILRIVETPAHREYARRGIIVKGAVID---------TTLGRAV--- 113 Query: 270 YAQVTNNPENDGCINAVLL 214 VT+ P +G +NAVLL Sbjct: 114 ---VTSRPGQEGVVNAVLL 129 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 88,821,672 Number of Sequences: 219361 Number of extensions: 1942484 Number of successful extensions: 4570 Number of sequences better than 10.0: 40 Number of HSP's better than 10.0 without gapping: 4439 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4554 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5253413348 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
