>SPT6H_BRARE (Q8UVK2) Transcription elongation factor SPT6 (Protein pandora)|
          Length = 1726

 Score = 28.5 bits (62), Expect(2) = 1.4
 Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
 Frame = +2

Query: 404  PLVAGTWACTCNWNNQK-NTPLHPSS*SQTSAARHQRTATTP 526
            PL+  +++ T     Q   TP +PSS  Q+S   HQ +++TP
Sbjct: 1610 PLMTPSYSYTTPGQQQAMTTPQYPSSTPQSSHGHHQHSSSTP 1651



 Score = 22.3 bits (46), Expect(2) = 1.4
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +1

Query: 598  HCSATPCYSEDTVAQGQPKLAHNT 669
            H S+TP  S   V   QPK + +T
Sbjct: 1646 HSSSTPSSSSSRVRTPQPKASSHT 1669

>META_THEMA (Q9WZY3) Homoserine O-succinyltransferase (EC 2.3.1.46) (Homoserine|
           O-transsuccinylase) (HTS)
          Length = 304

 Score = 31.2 bits (69), Expect = 3.0
 Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
 Frame = -2

Query: 437 YMY-MPKYQLPRGMSSVLSNKHVIPKLPGTFVLIEIH--LFLCPLHQHGAI*KENIEKLP 267
           Y Y +PKY+LP+ +S V   KH + K     VL   H   F  P  ++  + KE+I+K+P
Sbjct: 151 YFYGIPKYELPQKLSGVY--KHRVAK---DSVLFRGHDDFFWAPHSRYTEVKKEDIDKVP 205

Query: 266 NL 261
            L
Sbjct: 206 EL 207


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 93,647,003
Number of Sequences: 219361
Number of extensions: 1894811
Number of successful extensions: 3993
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3859
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3992
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6655306086
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)