>NUOM_BUCBP (Q89AT5) NADH-quinone oxidoreductase chain M (EC 1.6.99.5) (NADH|
           dehydrogenase I, chain M) (NDH-1, chain M)
          Length = 508

 Score = 33.1 bits (74), Expect = 0.46
 Identities = 18/62 (29%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
 Frame = -2

Query: 426 FSEVYGGVTMNNTLCLGVFLALIYFRELTWDFS----SEVLVILLACVIMGLFTSFRTSF 259
           +S++ G V + +TL L V+   IY   LT+D+     + + ++L +C+++G F +F    
Sbjct: 180 YSQISGLVLLLSTLVL-VYTHYIYDHILTFDYDVLKHTSMNIVLESCIMLGFFLAFAIKI 238

Query: 258 PL 253
           P+
Sbjct: 239 PI 240

>MRD1_NEUCR (Q7SG09) Multiple RNA-binding domain-containing protein 1|
          Length = 827

 Score = 32.0 bits (71), Expect = 1.0
 Identities = 19/62 (30%), Positives = 26/62 (41%)
 Frame = +1

Query: 295 DTGEQDDEHLRREVPRQLPEVDERQEHAQTQRVVHGHATVYL*ESEGASPLLLPAGEE*W 474
           + GE DDE+        +P     Q H   Q +V          SE A P+ L A ++ W
Sbjct: 179 EDGESDDEY------EDIPSRTHNQSHTADQEMVDAPLAASAEPSESAPPVSLDATDDDW 232

Query: 475 LR 480
           LR
Sbjct: 233 LR 234

>ELTD1_MOUSE (Q923X1) EGF, latrophilin seven transmembrane domain-containing|
           protein 1 precursor
          Length = 739

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 2/83 (2%)
 Frame = -2

Query: 426 FSEVYGG-VTMNNTLCLGVFLALIYFRELTWDFSSEVLVILLAC-VIMGLFTSFRTSFPL 253
           FSE+     T++  LC  +FLA     EL +     +    L C +I GL   F  +   
Sbjct: 501 FSEIQSTRTTIHKNLCCSLFLA-----ELVFLIGININTNKLVCSIIAGLLHYFFLAAFA 555

Query: 252 WTCLVAYLLYPLTLAIVYVLDFV 184
           W C+    LY + + ++Y   F+
Sbjct: 556 WMCIEGIHLYLIVVGVIYNKGFL 578

>MDN1_HUMAN (Q9NU22) Midasin (MIDAS-containing protein)|
          Length = 5596

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 24/68 (35%), Positives = 29/68 (42%), Gaps = 4/68 (5%)
 Frame = +1

Query: 253  EREAGPEACEEAHDDTGEQDDEHLRRE---VPRQLPEVDERQEHAQT-QRVVHGHATVYL 420
            ++EA  E  E    D G Q  E   RE      Q+PE  ER+EHA   Q  V        
Sbjct: 4987 DKEADEEGGENGPADQGFQPQEEEEREDSDTEEQVPEALERKEHASCGQTGVENMQNTQA 5046

Query: 421  *ESEGASP 444
             E  GA+P
Sbjct: 5047 MELAGAAP 5054

>IF2_AQUAE (O67825) Translation initiation factor IF-2|
          Length = 805

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 18/48 (37%), Positives = 23/48 (47%)
 Frame = +1

Query: 250 PEREAGPEACEEAHDDTGEQDDEHLRREVPRQLPEVDERQEHAQTQRV 393
           P    G E   EA D+    DDE   RE+  +  E  ER+E  QT R+
Sbjct: 543 PVEVLGFEELPEAGDELIVVDDERTAREIAEKRKEKKEREEKLQTIRL 590

>ELTD1_RAT (Q9ESC1) EGF, latrophilin and seven transmembrane domain-containing|
           protein 1 precursor (EGF-TM7-latrophilin-related
           protein) (ETL protein)
          Length = 738

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
 Frame = -2

Query: 426 FSEVYGG-VTMNNTLCLGVFLALIYFRELTWDFSSEVLVILLACVIMGLFTSFRTSFPLW 250
           FSE+     T++  LC  +FLA + F  +  + ++  LV     +I GL   F  +   W
Sbjct: 500 FSEIQSTRTTIHKNLCCSLFLAQLVFL-VGININTNKLV---CSIIAGLLHYFFLAAFAW 555

Query: 249 TCLVAYLLYPLTLAIVYVLDFV 184
            C+    LY + + ++Y   F+
Sbjct: 556 MCIEGIYLYLIVVGLIYNKGFL 577

>S19A2_HUMAN (O60779) Thiamine transporter 1 (ThTr-1) (ThTr1) (Thiamine carrier|
           1) (TC1) (Solute carrier family 19 member 2)
          Length = 497

 Score = 30.0 bits (66), Expect = 3.9
 Identities = 18/79 (22%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
 Frame = -2

Query: 426 FSEVY-GGVTMNNTLCLGVFLALIYFRELTWDFSSEVLVILLACVIMGLFTSFRTSFPLW 250
           ++ +Y GGV   +TL   V +  + + +++W    E+ + L + +I        T   +W
Sbjct: 328 YAAIYNGGVEAVSTLLGAVAVFAVGYIKISWSTWGEMTLSLFSLLIAAAVYIMDTVGNIW 387

Query: 249 TCLVAYLLYPLTLAIVYVL 193
            C  +Y+++     I+Y+L
Sbjct: 388 VCYASYVVF----RIIYML 402

>FGD1_HUMAN (P98174) FYVE, RhoGEF and PH domain-containing protein 1|
           (Faciogenital dysplasia 1 protein) (Zinc finger FYVE
           domain-containing protein 3) (Rho/Rac guanine nucleotide
           exchange factor FGD1) (Rho/Rac GEF)
          Length = 961

 Score = 30.0 bits (66), Expect = 3.9
 Identities = 15/50 (30%), Positives = 23/50 (46%)
 Frame = +1

Query: 250 PEREAGPEACEEAHDDTGEQDDEHLRREVPRQLPEVDERQEHAQTQRVVH 399
           P R    E   +  ++  E+++E   RE+P  L E  E  E    Q+V H
Sbjct: 327 PHRPGSQEVDSDLEEEDDEEEEEEKDREIPVPLMERQESVELTVQQKVFH 376

>ELTD1_HUMAN (Q9HBW9) EGF, latrophilin and seven transmembrane domain-containing|
           protein 1 precursor (EGF-TM7-latrophilin-related
           protein) (ETL protein)
          Length = 690

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 21/83 (25%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
 Frame = -2

Query: 426 FSEVYGG-VTMNNTLCLGVFLA-LIYFRELTWDFSSEVLVILLACVIMGLFTSFRTSFPL 253
           FSE+     T++  LC  +FLA L++   +  + +      L   +I GL   F  +   
Sbjct: 452 FSEIQSTRTTIHKNLCCSLFLAELVFLVGINTNTNK-----LFCSIIAGLLHYFFLAAFA 506

Query: 252 WTCLVAYLLYPLTLAIVYVLDFV 184
           W C+    LY + + ++Y   F+
Sbjct: 507 WMCIEGIHLYLIVVGVIYNKGFL 529

>GCY31_CAEEL (Q86C56) Soluble guanylate cyclase gcy-31 (EC 4.6.1.2)|
          Length = 702

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 15/54 (27%), Positives = 24/54 (44%)
 Frame = +1

Query: 184 DEVEDVNDXXXXXXXXXXHQTGPEREAGPEACEEAHDDTGEQDDEHLRREVPRQ 345
           +E+E + D           + GP R   P  CE   DD+  +DD+     +PR+
Sbjct: 596 EEIE-IKDDQTIQTFFVVSRHGPHRVPSPRNCESRQDDSQTEDDDDDELLLPRK 648

>VME1_CVTKE (P26021) E1 glycoprotein (Matrix glycoprotein) (Membrane|
           glycoprotein)
          Length = 230

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 14/58 (24%), Positives = 33/58 (56%), Gaps = 5/58 (8%)
 Frame = -2

Query: 339 WDFSSEVLVILLACVIMGLFTSFRTSFPLWTCLVAYLLYPLTLAI-----VYVLDFVF 181
           W+FS  ++++ +  ++   +TS   S  +   ++ +L++PLT+ +     VY L+ V+
Sbjct: 25  WNFSLGIILLFITIILQFGYTSRSMSVYVIKMIILWLMWPLTIILTIFNCVYALNNVY 82

>SACB_STRSL (Q55242) Levansucrase precursor (EC 2.4.1.10)|
           (Beta-D-fructofuranosyl transferase) (Sucrose
           6-fructosyl transferase)
          Length = 969

 Score = 29.3 bits (64), Expect = 6.6
 Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 2/94 (2%)
 Frame = +2

Query: 161 ARAYDQPKTKSRT*TMARVRGYSRYATRQVQSGKLVRKLVKRPMM-TQASRMT-STSEEK 334
           A A   P+T + + T+A     S   +  V+S     ++  +P+  TQ S  T S  EEK
Sbjct: 63  ATATATPETSTASLTVASETATSVATSEAVESSVAHSEVATKPVTETQPSNTTPSVVEEK 122

Query: 335 SHVSSLK*MSAKNTPRHSVLFMVTPPYTSEKVRE 436
           +  + +   S   TP  +V  +  P +TSE   E
Sbjct: 123 ASSTVVTSSSDATTPSATVAAVSAPAHTSEAAVE 156

>SPT7_YEAST (P35177) Transcriptional activator SPT7|
          Length = 1332

 Score = 28.9 bits (63), Expect = 8.6
 Identities = 19/65 (29%), Positives = 28/65 (43%)
 Frame = +1

Query: 178 TEDEVEDVNDXXXXXXXXXXHQTGPEREAGPEACEEAHDDTGEQDDEHLRREVPRQLPEV 357
           TED  +D +            +T   +EAG E  EE  DD  E +DE +       L + 
Sbjct: 668 TEDSSKDADAAKKDTEDGLQDKTAENKEAG-ENNEEEEDDDDEDEDEDMVDSQSYLLEKD 726

Query: 358 DERQE 372
           D+R +
Sbjct: 727 DDRDD 731

>S19A3_MOUSE (Q99PL8) Thiamine transporter 2 (ThTr-2) (ThTr2) (Solute carrier|
           family 19 member 3)
          Length = 488

 Score = 28.9 bits (63), Expect = 8.6
 Identities = 12/43 (27%), Positives = 20/43 (46%)
 Frame = -2

Query: 354 FRELTWDFSSEVLVILLACVIMGLFTSFRTSFPLWTCLVAYLL 226
           + ++ WD   E+ + + + VI G       S  +W C   YLL
Sbjct: 330 YLKVNWDLLGELGLAVFSAVIAGSLFLMNYSRSIWVCYAGYLL 372

>LGT_CAUCR (Q9AAV1) Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)|
          Length = 302

 Score = 28.9 bits (63), Expect = 8.6
 Identities = 13/27 (48%), Positives = 15/27 (55%)
 Frame = -1

Query: 319 ARHPARLCHHGPLHKLPDQLPALDLSG 239
           A HP R+C  GPL + P QL    L G
Sbjct: 185 ANHPQRICPAGPLPRHPSQLYEAALEG 211

>HDA1B_XENLA (O42227) Probable histone deacetylase 1-B (HD1) (RPD3 homolog)|
          Length = 480

 Score = 28.9 bits (63), Expect = 8.6
 Identities = 14/47 (29%), Positives = 23/47 (48%)
 Frame = +1

Query: 178 TEDEVEDVNDXXXXXXXXXXHQTGPEREAGPEACEEAHDDTGEQDDE 318
           T + +E +            H  G + +A PE  +  HDD+GE+D+E
Sbjct: 355 TNEYLEKIKQRLFENLRMLPHAPGVQMQAIPE--DSVHDDSGEEDEE 399

>AMIE_BACST (Q9RQ17) Aliphatic amidase (EC 3.5.1.4) (Acylamide amidohydrolase)|
           (Wide spectrum amidase)
          Length = 348

 Score = 28.9 bits (63), Expect = 8.6
 Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 5/55 (9%)
 Frame = +1

Query: 247 GPEREAGPEACEEAH-----DDTGEQDDEHLRREVPRQLPEVDERQEHAQTQRVV 396
           GPE E   EAC +A+       TGEQ +EH  +     L  ++ + E  Q  R +
Sbjct: 81  GPETEIFAEACRKANTWGVFSLTGEQHEEHPHKNPYNTLVLINNKGEIVQKYRKI 135


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,087,266
Number of Sequences: 219361
Number of extensions: 1233330
Number of successful extensions: 4826
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 4512
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4810
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3812186532
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)