ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags12b10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY104575.1| Zea mays PCO138774 mRNA sequence 391 e-105
2ref|NM_187347.2| Oryza sativa (japonica cultivar-group), mRNA 389 e-105
3dbj|AK070990.1| Oryza sativa (japonica cultivar-group) cDNA clon... 389 e-105
4dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 325 9e-86
5dbj|AP003956.5| Oryza sativa (japonica cultivar-group) genomic D... 325 9e-86
6dbj|AP003864.4| Oryza sativa (japonica cultivar-group) genomic D... 325 9e-86
7gb|AC124966.33| Medicago truncatula clone mth2-8i15, complete se... 76 1e-10
8ref|NM_187349.1| Oryza sativa (japonica cultivar-group), mRNA 72 2e-09
9dbj|D10660.1|IPBF1ATP Sweet potato mitochondrial F1-ATPase delta... 64 5e-07
10gb|BT014114.1| Lycopersicon esculentum clone 133218F, mRNA sequence 60 9e-06
11gb|BT018156.1| Zea mays clone EL01N0556B05.c mRNA sequence 52 0.002
12gb|L13320.1|PEAATPASE Pisum sativum F1-ATPase delta-prime subuni... 44 0.51
13ref|XM_520988.1| PREDICTED: Pan troglodytes similar to radixin (... 42 2.0
14ref|XM_522176.1| PREDICTED: Pan troglodytes similar to radixin (... 42 2.0
15ref|NM_204751.1| Gallus gallus radixin (RDX), mRNA 42 2.0
16ref|NM_002906.3| Homo sapiens radixin (RDX), mRNA 42 2.0
17emb|AJ249838.1|GGA249838 Gallus gallus mRNA for radixin (rdx gene) 42 2.0
18ref|NM_174259.2| Bos taurus calpain 1, (mu/I) large subunit (CAP... 42 2.0
19ref|XM_857605.1| PREDICTED: Canis familiaris similar to radixin,... 42 2.0
20ref|XM_536581.2| PREDICTED: Canis familiaris similar to radixin,... 42 2.0
21emb|AL590286.12| Human DNA sequence from clone RP11-157L10 on ch... 42 2.0
22emb|AL137182.9| Human DNA sequence from clone RP1-257A15 on chro... 42 2.0
23gb|BC047109.1| Homo sapiens radixin, mRNA (cDNA clone MGC:48283 ... 42 2.0
24emb|AL137751.1|HSM802383 Homo sapiens mRNA; cDNA DKFZp434I0812 (... 42 2.0
25gb|AC092318.2| Homo sapiens chromosome 5 clone RPCI-1_86A12, com... 42 2.0
26gb|M86444.1|PIGMOESB Sus scrofa moesin B mRNA, complete cds 42 2.0
27ref|NM_001009576.1| Sus scrofa moesin B (RDX), mRNA 42 2.0
28gb|AC006210.4| Homo sapiens X BAC GS1-309P15 (Genome Systems Hum... 42 2.0
29emb|BX648536.1|HSM808684 Homo sapiens mRNA; cDNA DKFZp779D2226 (... 42 2.0
30gb|AF221129.1|AF221129 Bos taurus micromolar calcium-dependent n... 42 2.0
31gb|AC004021.1|AC004021 Human PAC clone RP1-186K10 from 5q31, com... 42 2.0
32emb|CT573324.3| CH251-10E6, complete sequence 42 2.0
33dbj|AP000901.5| Homo sapiens genomic DNA, chromosome 11 clone:RP... 42 2.0
34gb|L02320.1|HUMRADIXIN Human radixin mRNA, complete cds 42 2.0
35dbj|AB021794.1| Pyrus pyrifolia PPFRU36 mRNA for F1-ATPase, part... 42 2.0
36gb|AC004633.1| Homo sapiens chromosome 5, P1 clone 41e13 (LBNL H... 40 7.9
37gb|AE006312.1| Lactococcus lactis subsp. lactis IL1403 section 7... 40 7.9
38emb|CR377226.19| Zebrafish DNA sequence from clone DKEY-120I4 in... 40 7.9
39emb|CR711892.2|CNS0GC8W Tetraodon nigroviridis full-length cDNA 40 7.9
40emb|CR717757.2|CNS0GGRN Tetraodon nigroviridis full-length cDNA 40 7.9
41emb|CR704896.2|CNS0G6UK Tetraodon nigroviridis full-length cDNA 40 7.9
42emb|CR678047.2|CNS0FM52 Tetraodon nigroviridis full-length cDNA 40 7.9
43emb|CR677999.2|CNS0FM3R Tetraodon nigroviridis full-length cDNA 40 7.9
44emb|CR671359.2|CNS0FGZP Tetraodon nigroviridis full-length cDNA 40 7.9
45emb|CR670662.2|CNS0FGGC Tetraodon nigroviridis full-length cDNA 40 7.9
46emb|CR665129.2|CNS0FC6N Tetraodon nigroviridis full-length cDNA 40 7.9
47emb|CR661561.2|CNS0F9FJ Tetraodon nigroviridis full-length cDNA 40 7.9
48emb|CR658320.2|CNS0F6XI Tetraodon nigroviridis full-length cDNA 40 7.9
49emb|CR655014.2|CNS0F4DO Tetraodon nigroviridis full-length cDNA 40 7.9
50emb|CR639459.2|CNS0ESDL Tetraodon nigroviridis full-length cDNA 40 7.9
51emb|CR638072.2|CNS0ERB2 Tetraodon nigroviridis full-length cDNA 40 7.9
52emb|CR632495.2|CNS0EN05 Tetraodon nigroviridis full-length cDNA 40 7.9
53emb|CR631144.2|CNS0ELYL Tetraodon nigroviridis full-length cDNA 40 7.9
54emb|CR632369.2|CNS0EMWN Tetraodon nigroviridis full-length cDNA 40 7.9
55emb|CR632349.2|CNS0EMW3 Tetraodon nigroviridis full-length cDNA 40 7.9
56emb|CR632195.2|CNS0EMRT Tetraodon nigroviridis full-length cDNA 40 7.9
57emb|CR631831.2|CNS0EMHP Tetraodon nigroviridis full-length cDNA 40 7.9
58emb|BX248419.4| Human DNA sequence from clone DASS-254G14 on chr... 40 7.9
59emb|AL844220.3| Human DNA sequence from clone DAQB-44E15 on chro... 40 7.9
60emb|AL662832.5| Human DNA sequence from clone XXbac-141O14 on ch... 40 7.9
61emb|AL662782.3| Human DNA sequence from clone XXbac-252N6 on chr... 40 7.9
62emb|AL080284.20|HSJ177I10 Human DNA sequence from clone RP1-177I... 40 7.9
63emb|AL023287.1|SPBC23E6 S.pombe chromosome II cosmid c23E6 40 7.9
64emb|AJ536587.1|MGL536587 Marthasterias glacialis partial mRNA fo... 40 7.9
65emb|CR388382.5| Human DNA sequence from clone DADB-23P23 on chro... 40 7.9
66emb|AL672026.11| Mouse DNA sequence from clone RP23-403O11 on ch... 40 7.9
67gb|AC073565.5| Mus musculus strain C57BL/6J chromosome 12 clone ... 40 7.9
68gb|AC010433.9| Homo sapiens chromosome 5 clone CTD-2202L20, comp... 40 7.9
69ref|NM_001022530.1| Schizosaccharomyces pombe 972h- hypothetical... 40 7.9
70dbj|AK032420.1| Mus musculus adult male olfactory brain cDNA, RI... 40 7.9
71dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
72dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
73emb|BX927189.6| Human DNA sequence from clone DAMA-83L10 on chro... 40 7.9
74gb|AC079181.3|AC079181 Mus musculus strain C57BL/6J chromosome 1... 40 7.9
75gb|AF289200.1|AF289200 Mus musculus junctin gene, partial cds 40 7.9
76dbj|AP003288.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
77gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 7.9
78gb|AC008506.7|AC008506 Homo sapiens chromosome 5 clone CTC-447O6... 40 7.9
79dbj|BA000025.2| Homo sapiens genomic DNA, chromosome 6p21.3, HLA... 40 7.9
80dbj|AP005633.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
81dbj|AP005392.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
82dbj|BA000041.2| Pan troglodytes DNA, major histocompatibility co... 40 7.9
83tpe|BN000872.1| TPA: TPA_exp: Mus musculus immunoglobulin heavy ... 40 7.9
84gb|AF042275.1|AF042275 Oryza sativa anther-specific protein gene... 40 7.9
85emb|AL162511.5|CNS01RHV Human chromosome 14 DNA sequence BAC R-2... 40 7.9
86emb|AL359233.5|CNS05TEK Human chromosome 14 DNA sequence BAC C-2... 40 7.9
87gb|AC004191.1|AC004191 Homo sapiens clone UWGC:y18c296 from 6p21... 40 7.9
88emb|AL773548.10| Mouse DNA sequence from clone RP23-70D2 on chro... 40 7.9
89emb|AL392023.3|CNS06C8J Human chromosome 14 DNA sequence BAC C-2... 40 7.9
90dbj|AB023053.1| Homo sapiens genomic DNA, chromosome 6p21.3, HLA... 40 7.9 
>gb|AY104575.1| Zea mays PCO138774 mRNA sequence
          Length = 1041

 Score =  391 bits (197), Expect = e-105
 Identities = 344/394 (87%)
 Strand = Plus / Minus

                                                                       
Query: 191 aaccagtcaatgcagcattgagcgcactgtgaacatccactccgatctgagcttccgcct 250
           |||| |||||||||||||||||||||||||||||||| || ||||||||||| || ||||
Sbjct: 719 aaccggtcaatgcagcattgagcgcactgtgaacatcgacaccgatctgagcctcagcct 660

                                                                       
Query: 251 tctttaggtcagtcgaggctgatccaagcttggcagtgaattcagcaagacctttctgga 310
           |||  |||||||| ||||| || ||||||||||||||||||||||| ||||| ||||| |
Sbjct: 659 tctccaggtcagtagaggccgaaccaagcttggcagtgaattcagcgagacccttctgaa 600

                                                                       
Query: 311 ccaagctttggtcaatctgatcaagggggacagcctcaacagccacaacatcagtaatgg 370
           | ||   | |||| |||||||| |  |||||||||||||||||||||| ||||| |||||
Sbjct: 599 caaaagctgggtcgatctgatccacagggacagcctcaacagccacaatatcagcaatgg 540

                                                                       
Query: 371 agtttgcatggatgaatgcaaagccactgctcacaaagtactttgtaacatcatttccct 430
           |||||||||||| ||| ||||| |||||||||||||||||||| || ||||| || ||||
Sbjct: 539 agtttgcatggacgaaagcaaatccactgctcacaaagtacttggtcacatcgttcccct 480

                                                                       
Query: 431 cgtgtacagacataacaccaggcttgagctctgcaattgtggaaacatggcctggcaaaa 490
           | ||||| || | |||||||||||||||||||||||| |||| |||||||||||||||||
Sbjct: 479 catgtactgagagaacaccaggcttgagctctgcaatcgtggcaacatggcctggcaaaa 420

                                                                       
Query: 491 tacccatcaggccagttgtagccggtaccattaccatatcaacctccttattgntgatct 550
             |||||| | ||||||||||| ||||| |||||||| || |||||||| |||  |||||
Sbjct: 419 cgcccatctgaccagttgtagctggtacaattaccatgtccacctccttgttggcgatct 360

                                             
Query: 551 cngacttgtagnggaggacgaagttgacggtgag 584
           | ||||||||| ||||||||||||||||||||||
Sbjct: 359 cggacttgtaggggaggacgaagttgacggtgag 326
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>ref|NM_187347.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 935

 Score =  389 bits (196), Expect = e-105
 Identities = 346/397 (87%)
 Strand = Plus / Minus

                                                                       
Query: 188 atcaaccagtcaatgcagcattgagcgcactgtgaacatccactccgatctgagcttccg 247
           ||||||||| ||| || ||||||||||||||||||||||||||||| ||||||||||| |
Sbjct: 705 atcaaccagccaaagcggcattgagcgcactgtgaacatccactccaatctgagcttcgg 646

                                                                       
Query: 248 ccttctttaggtcagtcgaggctgatccaagcttggcagtgaattcagcaagacctttct 307
           ||||||  || ||||| ||||| ||||||||||||||  ||||||| || ||||| | ||
Sbjct: 645 ccttctccagttcagttgaggccgatccaagcttggcgttgaattccgcgagaccctgct 586

                                                                       
Query: 308 ggaccaagctttggtcaatctgatcaagggggacagcctcaacagccacaacatcagtaa 367
           |||||  |  | |||| ||||| || ||||||||||||||||||||||| | |||||  |
Sbjct: 585 ggaccgcggctgggtcgatctggtccagggggacagcctcaacagccacgatatcagcga 526

                                                                       
Query: 368 tggagtttgcatggatgaatgcaaagccactgctcacaaagtactttgtaacatcatttc 427
           |||||||||||||||  ||||||||||||||||||||||||||||| || | ||| ||||
Sbjct: 525 tggagtttgcatggacaaatgcaaagccactgctcacaaagtacttggtgatatcgtttc 466

                                                                       
Query: 428 cctcgtgtacagacataacaccaggcttgagctctgcaattgtggaaacatggcctggca 487
           |||||||||| || | ||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 465 cctcgtgtaccgagagaacaccaggcttgagctctgcgattgtggaaacgtggcctggca 406

                                                                       
Query: 488 aaatacccatcaggccagttgtagccggtaccattaccatatcaacctccttattgntga 547
           ||| ||||||| | |||||||| || ||||| |||||||| ||||||||||| |||  ||
Sbjct: 405 aaacacccatctgaccagttgttgctggtacaattaccatgtcaacctccttgttggcga 346

                                                
Query: 548 tctcngacttgtagnggaggacgaagttgacggtgag 584
           |||| ||||||||| ||||||||||||||||||||||
Sbjct: 345 tctcggacttgtaggggaggacgaagttgacggtgag 309



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 77/86 (89%), Gaps = 4/86 (4%)
 Strand = Plus / Minus

                                                                       
Query: 63  ctttgagatggagtataatttatttaagtatcattccctccatcc--tcattcattgagt 120
           |||||||||||||||||||||||||||| ||||||||||||||||  |||| || |||||
Sbjct: 837 ctttgagatggagtataatttatttaag-atcattccctccatcccatcatcca-tgagt 780

                                     
Query: 121 ttgcaggcttcaactcacattntaaa 146
           |||||  ||||| |||||||| ||||
Sbjct: 779 ttgcaaacttcagctcacattctaaa 754
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>dbj|AK070990.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023078O13, full
           insert sequence
          Length = 935

 Score =  389 bits (196), Expect = e-105
 Identities = 346/397 (87%)
 Strand = Plus / Minus

                                                                       
Query: 188 atcaaccagtcaatgcagcattgagcgcactgtgaacatccactccgatctgagcttccg 247
           ||||||||| ||| || ||||||||||||||||||||||||||||| ||||||||||| |
Sbjct: 705 atcaaccagccaaagcggcattgagcgcactgtgaacatccactccaatctgagcttcgg 646

                                                                       
Query: 248 ccttctttaggtcagtcgaggctgatccaagcttggcagtgaattcagcaagacctttct 307
           ||||||  || ||||| ||||| ||||||||||||||  ||||||| || ||||| | ||
Sbjct: 645 ccttctccagttcagttgaggccgatccaagcttggcgttgaattccgcgagaccctgct 586

                                                                       
Query: 308 ggaccaagctttggtcaatctgatcaagggggacagcctcaacagccacaacatcagtaa 367
           |||||  |  | |||| ||||| || ||||||||||||||||||||||| | |||||  |
Sbjct: 585 ggaccgcggctgggtcgatctggtccagggggacagcctcaacagccacgatatcagcga 526

                                                                       
Query: 368 tggagtttgcatggatgaatgcaaagccactgctcacaaagtactttgtaacatcatttc 427
           |||||||||||||||  ||||||||||||||||||||||||||||| || | ||| ||||
Sbjct: 525 tggagtttgcatggacaaatgcaaagccactgctcacaaagtacttggtgatatcgtttc 466

                                                                       
Query: 428 cctcgtgtacagacataacaccaggcttgagctctgcaattgtggaaacatggcctggca 487
           |||||||||| || | ||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 465 cctcgtgtaccgagagaacaccaggcttgagctctgcgattgtggaaacgtggcctggca 406

                                                                       
Query: 488 aaatacccatcaggccagttgtagccggtaccattaccatatcaacctccttattgntga 547
           ||| ||||||| | |||||||| || ||||| |||||||| ||||||||||| |||  ||
Sbjct: 405 aaacacccatctgaccagttgttgctggtacaattaccatgtcaacctccttgttggcga 346

                                                
Query: 548 tctcngacttgtagnggaggacgaagttgacggtgag 584
           |||| ||||||||| ||||||||||||||||||||||
Sbjct: 345 tctcggacttgtaggggaggacgaagttgacggtgag 309



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 77/86 (89%), Gaps = 4/86 (4%)
 Strand = Plus / Minus

                                                                       
Query: 63  ctttgagatggagtataatttatttaagtatcattccctccatcc--tcattcattgagt 120
           |||||||||||||||||||||||||||| ||||||||||||||||  |||| || |||||
Sbjct: 837 ctttgagatggagtataatttatttaag-atcattccctccatcccatcatcca-tgagt 780

                                     
Query: 121 ttgcaggcttcaactcacattntaaa 146
           |||||  ||||| |||||||| ||||
Sbjct: 779 ttgcaaacttcagctcacattctaaa 754
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  325 bits (164), Expect = 9e-86
 Identities = 302/348 (86%)
 Strand = Plus / Plus

                                                                            
Query: 188      atcaaccagtcaatgcagcattgagcgcactgtgaacatccactccgatctgagcttccg 247
                ||||||||| ||| || ||||||||||||||||||||||||||||| ||||||||||| |
Sbjct: 18479198 atcaaccagccaaagcggcattgagcgcactgtgaacatccactccaatctgagcttcgg 18479257

                                                                            
Query: 248      ccttctttaggtcagtcgaggctgatccaagcttggcagtgaattcagcaagacctttct 307
                ||||||  || ||||| ||||| ||||||||||||||  ||||||| || ||||| | ||
Sbjct: 18479258 ccttctccagttcagttgaggccgatccaagcttggcgttgaattccgcgagaccctgct 18479317

                                                                            
Query: 308      ggaccaagctttggtcaatctgatcaagggggacagcctcaacagccacaacatcagtaa 367
                |||||  |  | |||| ||||| || ||||||||||||||||||||||| | |||||  |
Sbjct: 18479318 ggaccgcggctgggtcgatctggtccagggggacagcctcaacagccacgatatcagcga 18479377

                                                                            
Query: 368      tggagtttgcatggatgaatgcaaagccactgctcacaaagtactttgtaacatcatttc 427
                |||||||||||||||  ||||||||||||||||||||||||||||| || | ||| ||||
Sbjct: 18479378 tggagtttgcatggacaaatgcaaagccactgctcacaaagtacttggtgatatcgtttc 18479437

                                                                            
Query: 428      cctcgtgtacagacataacaccaggcttgagctctgcaattgtggaaacatggcctggca 487
                |||||||||| || | ||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 18479438 cctcgtgtaccgagagaacaccaggcttgagctctgcgattgtggaaacgtggcctggca 18479497

                                                                
Query: 488      aaatacccatcaggccagttgtagccggtaccattaccatatcaacct 535
                ||| ||||||| | |||||||| || ||||| |||||||| |||||||
Sbjct: 18479498 aaacacccatctgaccagttgttgctggtacaattaccatgtcaacct 18479545



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 77/86 (89%), Gaps = 4/86 (4%)
 Strand = Plus / Plus

                                                                            
Query: 63       ctttgagatggagtataatttatttaagtatcattccctccatcc--tcattcattgagt 120
                |||||||||||||||||||||||||||| ||||||||||||||||  |||| || |||||
Sbjct: 18479066 ctttgagatggagtataatttatttaag-atcattccctccatcccatcatcca-tgagt 18479123

                                          
Query: 121      ttgcaggcttcaactcacattntaaa 146
                |||||  ||||| |||||||| ||||
Sbjct: 18479124 ttgcaaacttcagctcacattctaaa 18479149



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 48/53 (90%)
 Strand = Plus / Plus

                                                                     
Query: 532      acctccttattgntgatctcngacttgtagnggaggacgaagttgacggtgag 584
                |||||||| |||  |||||| ||||||||| ||||||||||||||||||||||
Sbjct: 18487418 acctccttgttggcgatctcggacttgtaggggaggacgaagttgacggtgag 18487470



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 48/53 (90%)
 Strand = Plus / Plus

                                                                     
Query: 532      acctccttattgntgatctcngacttgtagnggaggacgaagttgacggtgag 584
                |||||||| |||  |||||| ||||||||| ||||||||||||||||||||||
Sbjct: 18481143 acctccttgttggcgatctcggacttgtaggggaggacgaagttgacggtgag 18481195
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>dbj|AP003956.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
            clone:OJ1457_D07
          Length = 103688

 Score =  325 bits (164), Expect = 9e-86
 Identities = 302/348 (86%)
 Strand = Plus / Plus

                                                                        
Query: 188  atcaaccagtcaatgcagcattgagcgcactgtgaacatccactccgatctgagcttccg 247
            ||||||||| ||| || ||||||||||||||||||||||||||||| ||||||||||| |
Sbjct: 7954 atcaaccagccaaagcggcattgagcgcactgtgaacatccactccaatctgagcttcgg 8013

                                                                        
Query: 248  ccttctttaggtcagtcgaggctgatccaagcttggcagtgaattcagcaagacctttct 307
            ||||||  || ||||| ||||| ||||||||||||||  ||||||| || ||||| | ||
Sbjct: 8014 ccttctccagttcagttgaggccgatccaagcttggcgttgaattccgcgagaccctgct 8073

                                                                        
Query: 308  ggaccaagctttggtcaatctgatcaagggggacagcctcaacagccacaacatcagtaa 367
            |||||  |  | |||| ||||| || ||||||||||||||||||||||| | |||||  |
Sbjct: 8074 ggaccgcggctgggtcgatctggtccagggggacagcctcaacagccacgatatcagcga 8133

                                                                        
Query: 368  tggagtttgcatggatgaatgcaaagccactgctcacaaagtactttgtaacatcatttc 427
            |||||||||||||||  ||||||||||||||||||||||||||||| || | ||| ||||
Sbjct: 8134 tggagtttgcatggacaaatgcaaagccactgctcacaaagtacttggtgatatcgtttc 8193

                                                                        
Query: 428  cctcgtgtacagacataacaccaggcttgagctctgcaattgtggaaacatggcctggca 487
            |||||||||| || | ||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 8194 cctcgtgtaccgagagaacaccaggcttgagctctgcgattgtggaaacgtggcctggca 8253

                                                            
Query: 488  aaatacccatcaggccagttgtagccggtaccattaccatatcaacct 535
            ||| ||||||| | |||||||| || ||||| |||||||| |||||||
Sbjct: 8254 aaacacccatctgaccagttgttgctggtacaattaccatgtcaacct 8301



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 77/86 (89%), Gaps = 4/86 (4%)
 Strand = Plus / Plus

                                                                        
Query: 63   ctttgagatggagtataatttatttaagtatcattccctccatcc--tcattcattgagt 120
            |||||||||||||||||||||||||||| ||||||||||||||||  |||| || |||||
Sbjct: 7822 ctttgagatggagtataatttatttaag-atcattccctccatcccatcatcca-tgagt 7879

                                      
Query: 121  ttgcaggcttcaactcacattntaaa 146
            |||||  ||||| |||||||| ||||
Sbjct: 7880 ttgcaaacttcagctcacattctaaa 7905



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 48/53 (90%)
 Strand = Plus / Plus

                                                                  
Query: 532   acctccttattgntgatctcngacttgtagnggaggacgaagttgacggtgag 584
             |||||||| |||  |||||| ||||||||| ||||||||||||||||||||||
Sbjct: 16174 acctccttgttggcgatctcggacttgtaggggaggacgaagttgacggtgag 16226



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 48/53 (90%)
 Strand = Plus / Plus

                                                                 
Query: 532  acctccttattgntgatctcngacttgtagnggaggacgaagttgacggtgag 584
            |||||||| |||  |||||| ||||||||| ||||||||||||||||||||||
Sbjct: 9899 acctccttgttggcgatctcggacttgtaggggaggacgaagttgacggtgag 9951
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>dbj|AP003864.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1058_B11
          Length = 102824

 Score =  325 bits (164), Expect = 9e-86
 Identities = 302/348 (86%)
 Strand = Plus / Plus

                                                                         
Query: 188   atcaaccagtcaatgcagcattgagcgcactgtgaacatccactccgatctgagcttccg 247
             ||||||||| ||| || ||||||||||||||||||||||||||||| ||||||||||| |
Sbjct: 71046 atcaaccagccaaagcggcattgagcgcactgtgaacatccactccaatctgagcttcgg 71105

                                                                         
Query: 248   ccttctttaggtcagtcgaggctgatccaagcttggcagtgaattcagcaagacctttct 307
             ||||||  || ||||| ||||| ||||||||||||||  ||||||| || ||||| | ||
Sbjct: 71106 ccttctccagttcagttgaggccgatccaagcttggcgttgaattccgcgagaccctgct 71165

                                                                         
Query: 308   ggaccaagctttggtcaatctgatcaagggggacagcctcaacagccacaacatcagtaa 367
             |||||  |  | |||| ||||| || ||||||||||||||||||||||| | |||||  |
Sbjct: 71166 ggaccgcggctgggtcgatctggtccagggggacagcctcaacagccacgatatcagcga 71225

                                                                         
Query: 368   tggagtttgcatggatgaatgcaaagccactgctcacaaagtactttgtaacatcatttc 427
             |||||||||||||||  ||||||||||||||||||||||||||||| || | ||| ||||
Sbjct: 71226 tggagtttgcatggacaaatgcaaagccactgctcacaaagtacttggtgatatcgtttc 71285

                                                                         
Query: 428   cctcgtgtacagacataacaccaggcttgagctctgcaattgtggaaacatggcctggca 487
             |||||||||| || | ||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 71286 cctcgtgtaccgagagaacaccaggcttgagctctgcgattgtggaaacgtggcctggca 71345

                                                             
Query: 488   aaatacccatcaggccagttgtagccggtaccattaccatatcaacct 535
             ||| ||||||| | |||||||| || ||||| |||||||| |||||||
Sbjct: 71346 aaacacccatctgaccagttgttgctggtacaattaccatgtcaacct 71393



 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 77/86 (89%), Gaps = 4/86 (4%)
 Strand = Plus / Plus

                                                                         
Query: 63    ctttgagatggagtataatttatttaagtatcattccctccatcc--tcattcattgagt 120
             |||||||||||||||||||||||||||| ||||||||||||||||  |||| || |||||
Sbjct: 70914 ctttgagatggagtataatttatttaag-atcattccctccatcccatcatcca-tgagt 70971

                                       
Query: 121   ttgcaggcttcaactcacattntaaa 146
             |||||  ||||| |||||||| ||||
Sbjct: 70972 ttgcaaacttcagctcacattctaaa 70997



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 48/53 (90%)
 Strand = Plus / Plus

                                                                  
Query: 532   acctccttattgntgatctcngacttgtagnggaggacgaagttgacggtgag 584
             |||||||| |||  |||||| ||||||||| ||||||||||||||||||||||
Sbjct: 79266 acctccttgttggcgatctcggacttgtaggggaggacgaagttgacggtgag 79318



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 48/53 (90%)
 Strand = Plus / Plus

                                                                  
Query: 532   acctccttattgntgatctcngacttgtagnggaggacgaagttgacggtgag 584
             |||||||| |||  |||||| ||||||||| ||||||||||||||||||||||
Sbjct: 72991 acctccttgttggcgatctcggacttgtaggggaggacgaagttgacggtgag 73043
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>gb|AC124966.33| Medicago truncatula clone mth2-8i15, complete sequence
          Length = 121141

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 134/166 (80%)
 Strand = Plus / Minus

                                                                         
Query: 370   gagtttgcatggatgaatgcaaagccactgctcacaaagtactttgtaacatcatttccc 429
             ||||||||||||| ||| || ||||||||||| ||||| ||||| ||   |||||| || 
Sbjct: 89926 gagtttgcatggacgaaagcgaagccactgcttacaaaatacttggtcgaatcattccct 89867

                                                                         
Query: 430   tcgtgtacagacataacaccaggcttgagctctgcaattgtggaaacatggcctggcaaa 489
             || ||||||  ||| || ||||| || | |||||||||||| |||||||| ||||| |  
Sbjct: 89866 tcttgtacaatcatgaccccaggtttcaactctgcaattgttgaaacatgtcctgggagg 89807

                                                           
Query: 490   atacccatcaggccagttgtagccggtaccattaccatatcaacct 535
             ||||||||| |||| ||||| || || |  ||||||| ||||||||
Sbjct: 89806 atacccatctggcctgttgtggctgggattattaccagatcaacct 89761
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>ref|NM_187349.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 327

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 48/53 (90%)
 Strand = Plus / Minus

                                                                
Query: 532 acctccttattgntgatctcngacttgtagnggaggacgaagttgacggtgag 584
           |||||||| |||  |||||| ||||||||| ||||||||||||||||||||||
Sbjct: 281 acctccttgttggcgatctcggacttgtaggggaggacgaagttgacggtgag 229
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>dbj|D10660.1|IPBF1ATP Sweet potato mitochondrial F1-ATPase delta subunit mRNA, complete
           cds
          Length = 936

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 83/100 (83%)
 Strand = Plus / Minus

                                                                       
Query: 373 tttgcatggatgaatgcaaagccactgctcacaaagtactttgtaacatcatttccctcg 432
           |||||||||||||| || ||||| |  ||||||||||| || |  |||||||| || |||
Sbjct: 507 tttgcatggatgaaagcgaagccgccactcacaaagtatttggacacatcattaccttcg 448

                                                   
Query: 433 tgtacagacataacaccaggcttgagctctgcaattgtgg 472
           || || ||||| ||||||||||| ||||| ||||| ||||
Sbjct: 447 tgaaccgacatgacaccaggcttcagctcagcaatcgtgg 408
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>gb|BT014114.1| Lycopersicon esculentum clone 133218F, mRNA sequence
          Length = 937

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 72/86 (83%)
 Strand = Plus / Minus

                                                                       
Query: 385 aatgcaaagccactgctcacaaagtactttgtaacatcatttccctcgtgtacagacata 444
           |||||||| ||||  ||||||||||||||  | |||||||| |||||||| || || | |
Sbjct: 506 aatgcaaatccaccactcacaaagtacttgttcacatcattgccctcgtgaactgataaa 447

                                     
Query: 445 acaccaggcttgagctctgcaattgt 470
           | ||||||||| ||||| ||||||||
Sbjct: 446 ataccaggcttcagctcagcaattgt 421
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>gb|BT018156.1| Zea mays clone EL01N0556B05.c mRNA sequence
          Length = 429

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 80/98 (81%)
 Strand = Plus / Minus

                                                                       
Query: 198 caatgcagcattgagcgcactgtgaacatccactccgatctgagcttccgccttctttag 257
           ||||||||||||| | |||||| ||||||| |||||||| || || || |||||||  ||
Sbjct: 116 caatgcagcattgggggcactgggaacatcgactccgatttgggcctcagccttctccag 57

                                                 
Query: 258 gtcagtcgaggctgatccaagcttggcagtgaattcag 295
           |||| |  ||||  | |||||||||| || ||||||||
Sbjct: 56  gtcattaaaggccaaaccaagcttgggagggaattcag 19
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>gb|L13320.1|PEAATPASE Pisum sativum F1-ATPase delta-prime subunit gene, complete cds
          Length = 3009

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 61/74 (82%)
 Strand = Plus / Minus

                                                                        
Query: 340  acagcctcaacagccacaacatcagtaatggagtttgcatggatgaatgcaaagccactg 399
            |||||||| ||||| | || ||||| ||  |||||||| |||||||||   |||||||||
Sbjct: 2666 acagcctctacagcaataatatcagcaacagagtttgcgtggatgaatcggaagccactg 2607

                          
Query: 400  ctcacaaagtactt 413
            || ||||| |||||
Sbjct: 2606 cttacaaaatactt 2593
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>ref|XM_520988.1| PREDICTED: Pan troglodytes similar to radixin (LOC465550), mRNA
          Length = 649

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 279 cttggcagtgaattcagcaag 299
           |||||||||||||||||||||
Sbjct: 286 cttggcagtgaattcagcaag 266
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>ref|XM_522176.1| PREDICTED: Pan troglodytes similar to radixin (LOC466776), mRNA
          Length = 1788

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 279  cttggcagtgaattcagcaag 299
            |||||||||||||||||||||
Sbjct: 1317 cttggcagtgaattcagcaag 1297
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>ref|NM_204751.1| Gallus gallus radixin (RDX), mRNA
          Length = 2179

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 279  cttggcagtgaattcagcaag 299
            |||||||||||||||||||||
Sbjct: 1517 cttggcagtgaattcagcaag 1497
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>ref|NM_002906.3| Homo sapiens radixin (RDX), mRNA
          Length = 4498

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 279  cttggcagtgaattcagcaag 299
            |||||||||||||||||||||
Sbjct: 1591 cttggcagtgaattcagcaag 1571
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>emb|AJ249838.1|GGA249838 Gallus gallus mRNA for radixin (rdx gene)
          Length = 2179

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 279  cttggcagtgaattcagcaag 299
            |||||||||||||||||||||
Sbjct: 1517 cttggcagtgaattcagcaag 1497
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>ref|NM_174259.2| Bos taurus calpain 1, (mu/I) large subunit (CAPN1), mRNA
          Length = 2948

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 113  cattgagtttgcaggcttcaa 133
            |||||||||||||||||||||
Sbjct: 2012 cattgagtttgcaggcttcaa 2032
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>ref|XM_857605.1| PREDICTED: Canis familiaris similar to radixin, transcript variant 6
            (LOC479446), mRNA
          Length = 2006

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 279  cttggcagtgaattcagcaag 299
            |||||||||||||||||||||
Sbjct: 1421 cttggcagtgaattcagcaag 1401
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>ref|XM_536581.2| PREDICTED: Canis familiaris similar to radixin, transcript variant 1
            (LOC479446), mRNA
          Length = 2065

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 279  cttggcagtgaattcagcaag 299
            |||||||||||||||||||||
Sbjct: 1364 cttggcagtgaattcagcaag 1344
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>emb|AL590286.12| Human DNA sequence from clone RP11-157L10 on chromosome 6 Contains a
             ribosomal protein L34 (RPL34) pseudogene, complete
             sequence
          Length = 65756

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 2     attaccattacaaaaatccttgcag 26
             ||||||||||||||||| |||||||
Sbjct: 65442 attaccattacaaaaatacttgcag 65418
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>emb|AL137182.9| Human DNA sequence from clone RP1-257A15 on chromosome 6 Contains
            part of a novel gene, part of the gene for a novel
            protein (FLJ32724) and a CpG island, complete sequence
          Length = 120988

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 2    attaccattacaaaaatccttgcag 26
            ||||||||||||||||| |||||||
Sbjct: 1686 attaccattacaaaaatacttgcag 1662
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>gb|BC047109.1| Homo sapiens radixin, mRNA (cDNA clone MGC:48283 IMAGE:5284438),
            complete cds
          Length = 4412

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 279  cttggcagtgaattcagcaag 299
            |||||||||||||||||||||
Sbjct: 1491 cttggcagtgaattcagcaag 1471
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>emb|AL137751.1|HSM802383 Homo sapiens mRNA; cDNA DKFZp434I0812 (from clone DKFZp434I0812);
           partial cds
          Length = 3658

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 279 cttggcagtgaattcagcaag 299
           |||||||||||||||||||||
Sbjct: 748 cttggcagtgaattcagcaag 728
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>gb|AC092318.2| Homo sapiens chromosome 5 clone RPCI-1_86A12, complete sequence
          Length = 91803

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 69    gatggagtataatttatttaa 89
             |||||||||||||||||||||
Sbjct: 39942 gatggagtataatttatttaa 39922
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>gb|M86444.1|PIGMOESB Sus scrofa moesin B mRNA, complete cds
          Length = 2320

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 279  cttggcagtgaattcagcaag 299
            |||||||||||||||||||||
Sbjct: 1491 cttggcagtgaattcagcaag 1471
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>ref|NM_001009576.1| Sus scrofa moesin B (RDX), mRNA
          Length = 2320

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 279  cttggcagtgaattcagcaag 299
            |||||||||||||||||||||
Sbjct: 1491 cttggcagtgaattcagcaag 1471
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>gb|AC006210.4| Homo sapiens X BAC GS1-309P15 (Genome Systems Human BAC Library) complete
              sequence
          Length = 185638

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 279    cttggcagtgaattcagcaag 299
              |||||||||||||||||||||
Sbjct: 102685 cttggcagtgaattcagcaag 102665
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>emb|BX648536.1|HSM808684 Homo sapiens mRNA; cDNA DKFZp779D2226 (from clone DKFZp779D2226)
          Length = 3215

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 279 cttggcagtgaattcagcaag 299
           |||||||||||||||||||||
Sbjct: 307 cttggcagtgaattcagcaag 287
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>gb|AF221129.1|AF221129 Bos taurus micromolar calcium-dependent neutral protease large
            subunit (CAPN1) mRNA, complete cds
          Length = 2948

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 113  cattgagtttgcaggcttcaa 133
            |||||||||||||||||||||
Sbjct: 2012 cattgagtttgcaggcttcaa 2032
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>gb|AC004021.1|AC004021 Human PAC clone RP1-186K10 from 5q31, complete sequence
          Length = 171370

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 69     gatggagtataatttatttaa 89
              |||||||||||||||||||||
Sbjct: 156928 gatggagtataatttatttaa 156908
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>emb|CT573324.3| CH251-10E6, complete sequence
          Length = 169419

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 279   cttggcagtgaattcagcaag 299
             |||||||||||||||||||||
Sbjct: 98882 cttggcagtgaattcagcaag 98862
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>dbj|AP000901.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-686G14, complete
             sequence
          Length = 205903

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 279   cttggcagtgaattcagcaag 299
             |||||||||||||||||||||
Sbjct: 87936 cttggcagtgaattcagcaag 87956
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>gb|L02320.1|HUMRADIXIN Human radixin mRNA, complete cds
          Length = 2022

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 279  cttggcagtgaattcagcaag 299
            |||||||||||||||||||||
Sbjct: 1311 cttggcagtgaattcagcaag 1291
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>dbj|AB021794.1| Pyrus pyrifolia PPFRU36 mRNA for F1-ATPase, partial cds
          Length = 435

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 60/73 (82%)
 Strand = Plus / Minus

                                                                       
Query: 329 gatcaagggggacagcctcaacagccacaacatcagtaatggagtttgcatggatgaatg 388
           ||||||| ||||||||||| ||||| |  |  || | ||| ||||| || ||||||||||
Sbjct: 91  gatcaagagggacagcctctacagcaattatgtctgcaatagagttcgcgtggatgaatg 32

                        
Query: 389 caaagccactgct 401
           |||| ||||||||
Sbjct: 31  caaaaccactgct 19
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>gb|AC004633.1| Homo sapiens chromosome 5, P1 clone 41e13 (LBNL H151), complete
             sequence
          Length = 89484

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 77    ataatttatttaagtatcat 96
             ||||||||||||||||||||
Sbjct: 69241 ataatttatttaagtatcat 69222
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>gb|AE006312.1| Lactococcus lactis subsp. lactis IL1403 section 74 of 218 of the
            complete genome
          Length = 10348

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 193  ccagtcaatgcagcattgag 212
            ||||||||||||||||||||
Sbjct: 5936 ccagtcaatgcagcattgag 5955
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>emb|CR377226.19| Zebrafish DNA sequence from clone DKEY-120I4 in linkage group 8,
             complete sequence
          Length = 173122

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 318   ttggtcaatctgatcaaggg 337
             ||||||||||||||||||||
Sbjct: 26475 ttggtcaatctgatcaaggg 26456
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>emb|CR711892.2|CNS0GC8W Tetraodon nigroviridis full-length cDNA
          Length = 721

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 394 ccactgctcacaaagtactt 413
           ||||||||||||||||||||
Sbjct: 372 ccactgctcacaaagtactt 353
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>emb|CR717757.2|CNS0GGRN Tetraodon nigroviridis full-length cDNA
          Length = 681

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 394 ccactgctcacaaagtactt 413
           ||||||||||||||||||||
Sbjct: 363 ccactgctcacaaagtactt 344
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>emb|CR704896.2|CNS0G6UK Tetraodon nigroviridis full-length cDNA
          Length = 1001

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 394 ccactgctcacaaagtactt 413
           ||||||||||||||||||||
Sbjct: 355 ccactgctcacaaagtactt 336
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>emb|CR678047.2|CNS0FM52 Tetraodon nigroviridis full-length cDNA
          Length = 680

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 394 ccactgctcacaaagtactt 413
           ||||||||||||||||||||
Sbjct: 333 ccactgctcacaaagtactt 314
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>emb|CR677999.2|CNS0FM3R Tetraodon nigroviridis full-length cDNA
          Length = 689

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 394 ccactgctcacaaagtactt 413
           ||||||||||||||||||||
Sbjct: 343 ccactgctcacaaagtactt 324
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>emb|CR671359.2|CNS0FGZP Tetraodon nigroviridis full-length cDNA
          Length = 675

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 394 ccactgctcacaaagtactt 413
           ||||||||||||||||||||
Sbjct: 333 ccactgctcacaaagtactt 314
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>emb|CR670662.2|CNS0FGGC Tetraodon nigroviridis full-length cDNA
          Length = 706

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 394 ccactgctcacaaagtactt 413
           ||||||||||||||||||||
Sbjct: 365 ccactgctcacaaagtactt 346
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>emb|CR665129.2|CNS0FC6N Tetraodon nigroviridis full-length cDNA
          Length = 696

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 394 ccactgctcacaaagtactt 413
           ||||||||||||||||||||
Sbjct: 347 ccactgctcacaaagtactt 328
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>emb|CR661561.2|CNS0F9FJ Tetraodon nigroviridis full-length cDNA
          Length = 671

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 394 ccactgctcacaaagtactt 413
           ||||||||||||||||||||
Sbjct: 347 ccactgctcacaaagtactt 328
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>emb|CR658320.2|CNS0F6XI Tetraodon nigroviridis full-length cDNA
          Length = 691

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 394 ccactgctcacaaagtactt 413
           ||||||||||||||||||||
Sbjct: 345 ccactgctcacaaagtactt 326
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>emb|CR655014.2|CNS0F4DO Tetraodon nigroviridis full-length cDNA
          Length = 711

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 394 ccactgctcacaaagtactt 413
           ||||||||||||||||||||
Sbjct: 364 ccactgctcacaaagtactt 345
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>emb|CR639459.2|CNS0ESDL Tetraodon nigroviridis full-length cDNA
          Length = 724

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 394 ccactgctcacaaagtactt 413
           ||||||||||||||||||||
Sbjct: 377 ccactgctcacaaagtactt 358
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>emb|CR638072.2|CNS0ERB2 Tetraodon nigroviridis full-length cDNA
          Length = 729

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 394 ccactgctcacaaagtactt 413
           ||||||||||||||||||||
Sbjct: 380 ccactgctcacaaagtactt 361
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>emb|CR632495.2|CNS0EN05 Tetraodon nigroviridis full-length cDNA
          Length = 712

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 394 ccactgctcacaaagtactt 413
           ||||||||||||||||||||
Sbjct: 363 ccactgctcacaaagtactt 344
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>emb|CR631144.2|CNS0ELYL Tetraodon nigroviridis full-length cDNA
          Length = 712

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 394 ccactgctcacaaagtactt 413
           ||||||||||||||||||||
Sbjct: 363 ccactgctcacaaagtactt 344
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>emb|CR632369.2|CNS0EMWN Tetraodon nigroviridis full-length cDNA
          Length = 712

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 394 ccactgctcacaaagtactt 413
           ||||||||||||||||||||
Sbjct: 363 ccactgctcacaaagtactt 344
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>emb|CR632349.2|CNS0EMW3 Tetraodon nigroviridis full-length cDNA
          Length = 710

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 394 ccactgctcacaaagtactt 413
           ||||||||||||||||||||
Sbjct: 363 ccactgctcacaaagtactt 344
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>emb|CR632195.2|CNS0EMRT Tetraodon nigroviridis full-length cDNA
          Length = 711

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 394 ccactgctcacaaagtactt 413
           ||||||||||||||||||||
Sbjct: 363 ccactgctcacaaagtactt 344
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>emb|CR631831.2|CNS0EMHP Tetraodon nigroviridis full-length cDNA
          Length = 702

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 394 ccactgctcacaaagtactt 413
           ||||||||||||||||||||
Sbjct: 352 ccactgctcacaaagtactt 333
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>emb|BX248419.4| Human DNA sequence from clone DASS-254G14 on chromosome 6, complete
             sequence
          Length = 122321

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 158   aaaagaacatcaaaatgtaa 177
             ||||||||||||||||||||
Sbjct: 81150 aaaagaacatcaaaatgtaa 81131
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>emb|AL844220.3| Human DNA sequence from clone DAQB-44E15 on chromosome 6 Contains the
             TRIM10 gene for tripartite motif-containing 10, the TRIM15
             gene for tripartite motif-containing 15, the TRIM26 gene
             for tripartite motif-containing 26, the PAIP1P1 pseudogene
             for poly(A) binding protein interacting protein 1
             pseudogene 1, the HCG17 gene for HLA complex group 17, the
             TRIM26P pseudogene for tripartite motif-containing 26, the
             HLA-L pseudogene for major histocompatibility complex,
             class I, L, the 3' end of the HCG18 gene for HLA complex
             group 18 and 3 CpG islands, complete sequence
          Length = 152298

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 158   aaaagaacatcaaaatgtaa 177
             ||||||||||||||||||||
Sbjct: 97570 aaaagaacatcaaaatgtaa 97551
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>emb|AL662832.5| Human DNA sequence from clone XXbac-141O14 on chromosome 6 contains the
             5' end of the TRIM26 gene for tripartite motif containing
             26, two putative novel transcript, a  tripartite motif
             containing 26 (TRIM26) pseudogene, a MHC class 1
             pseudogene, the TRIM39 gene for tripartite motif
             containing 39, the RPP21 gene for ribonuclease p subunit
             and four CpG islands, complete sequence
          Length = 161348

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 158   aaaagaacatcaaaatgtaa 177
             ||||||||||||||||||||
Sbjct: 57065 aaaagaacatcaaaatgtaa 57046
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>emb|AL662782.3| Human DNA sequence from clone XXbac-252N6 on chromosome 6 contains a
             putative novel transcript, a tripartite motif containing
             26 (TRIM26) pseudogene, a MHC class 1 pseudogene and two
             CpG islands, complete sequence
          Length = 62456

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 158   aaaagaacatcaaaatgtaa 177
             ||||||||||||||||||||
Sbjct: 40354 aaaagaacatcaaaatgtaa 40335
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>emb|AL080284.20|HSJ177I10 Human DNA sequence from clone RP1-177I10 on chromosome 6q16.1-16.3
              Contains a novel gene, complete sequence
          Length = 160750

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 162    gaacatcaaaatgtaagatg 181
              ||||||||||||||||||||
Sbjct: 130820 gaacatcaaaatgtaagatg 130801
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>emb|AL023287.1|SPBC23E6 S.pombe chromosome II cosmid c23E6
          Length = 34486

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 340   acagcctcaacagccacaacatca 363
             |||||||||||||| |||||||||
Sbjct: 27489 acagcctcaacagcaacaacatca 27512
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>emb|AJ536587.1|MGL536587 Marthasterias glacialis partial mRNA for extracellular
           signal-regulated protein kinase (erk gene)
          Length = 1247

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 366 aatggagtttgcatggatga 385
           ||||||||||||||||||||
Sbjct: 363 aatggagtttgcatggatga 344
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>emb|CR388382.5| Human DNA sequence from clone DADB-23P23 on chromosome 6, complete
             sequence
          Length = 109067

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 158   aaaagaacatcaaaatgtaa 177
             ||||||||||||||||||||
Sbjct: 85364 aaaagaacatcaaaatgtaa 85345
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>emb|AL672026.11| Mouse DNA sequence from clone RP23-403O11 on chromosome X, complete
              sequence
          Length = 200566

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 164    acatcaaaatgtaagatgtctgtc 187
              |||||||||||||| |||||||||
Sbjct: 109326 acatcaaaatgtaatatgtctgtc 109303



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 164   acatcaaaatgtaagatgtctgtc 187
             |||||||||||||| |||||||||
Sbjct: 72192 acatcaaaatgtaatatgtctgtc 72215
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>gb|AC073565.5| Mus musculus strain C57BL/6J chromosome 12 clone RP23-70F21, complete
             sequence
          Length = 180673

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 291   ttcagcaagacctttctgga 310
             ||||||||||||||||||||
Sbjct: 15829 ttcagcaagacctttctgga 15810
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>gb|AC010433.9| Homo sapiens chromosome 5 clone CTD-2202L20, complete sequence
          Length = 258929

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 77    ataatttatttaagtatcat 96
             ||||||||||||||||||||
Sbjct: 37717 ataatttatttaagtatcat 37698
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>ref|NM_001022530.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPBC23E6.09),
           partial mRNA
          Length = 3309

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 340 acagcctcaacagccacaacatca 363
           |||||||||||||| |||||||||
Sbjct: 528 acagcctcaacagcaacaacatca 551
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>dbj|AK032420.1| Mus musculus adult male olfactory brain cDNA, RIKEN full-length
            enriched library, clone:6430541N23
            product:aspartate-beta-hydroxylase, full insert sequence
          Length = 2497

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 81   tttatttaagtatcattccc 100
            ||||||||||||||||||||
Sbjct: 2017 tttatttaagtatcattccc 2036
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 154      gatgaaaagaacatcaaaat 173
                ||||||||||||||||||||
Sbjct: 18401920 gatgaaaagaacatcaaaat 18401901
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 353      ccacaacatcagtaatggag 372
                ||||||||||||||||||||
Sbjct: 29804305 ccacaacatcagtaatggag 29804324
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>emb|BX927189.6| Human DNA sequence from clone DAMA-83L10 on chromosome 6, complete
             sequence
          Length = 124330

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 158   aaaagaacatcaaaatgtaa 177
             ||||||||||||||||||||
Sbjct: 52579 aaaagaacatcaaaatgtaa 52560
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>gb|AC079181.3|AC079181 Mus musculus strain C57BL/6J chromosome 12 clone RP23-197F8, complete
              sequence
          Length = 209058

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 291    ttcagcaagacctttctgga 310
              ||||||||||||||||||||
Sbjct: 197558 ttcagcaagacctttctgga 197539
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>gb|AF289200.1|AF289200 Mus musculus junctin gene, partial cds
          Length = 10571

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 81  tttatttaagtatcattccc 100
           ||||||||||||||||||||
Sbjct: 531 tttatttaagtatcattccc 550
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>dbj|AP003288.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0683B11
          Length = 155955

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 353   ccacaacatcagtaatggag 372
             ||||||||||||||||||||
Sbjct: 48400 ccacaacatcagtaatggag 48419
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 22      tgcaggtactcgaagttgaa 41
               ||||||||||||||||||||
Sbjct: 2458846 tgcaggtactcgaagttgaa 2458827
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>gb|AC008506.7|AC008506 Homo sapiens chromosome 5 clone CTC-447O6, complete sequence
          Length = 191557

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 64     tttgagatggagtataattt 83
              ||||||||||||||||||||
Sbjct: 169055 tttgagatggagtataattt 169074
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>dbj|BA000025.2| Homo sapiens genomic DNA, chromosome 6p21.3, HLA Class I region
          Length = 2229817

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 158     aaaagaacatcaaaatgtaa 177
               ||||||||||||||||||||
Sbjct: 1695625 aaaagaacatcaaaatgtaa 1695644
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>dbj|AP005633.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0463G11
          Length = 154188

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 154    gatgaaaagaacatcaaaat 173
              ||||||||||||||||||||
Sbjct: 116656 gatgaaaagaacatcaaaat 116637
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>dbj|AP005392.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0463D04
          Length = 145828

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 154   gatgaaaagaacatcaaaat 173
             ||||||||||||||||||||
Sbjct: 63794 gatgaaaagaacatcaaaat 63775
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>dbj|BA000041.2| Pan troglodytes DNA, major histocompatibility complex class I region
          Length = 1750601

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 158     aaaagaacatcaaaatgtaa 177
               ||||||||||||||||||||
Sbjct: 1238090 aaaagaacatcaaaatgtaa 1238109
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>tpe|BN000872.1| TPA: TPA_exp: Mus musculus immunoglobulin heavy chain variable region
               locus, strain C57BL/6
          Length = 2500000

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 291     ttcagcaagacctttctgga 310
               ||||||||||||||||||||
Sbjct: 1200456 ttcagcaagacctttctgga 1200437
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>gb|AF042275.1|AF042275 Oryza sativa anther-specific protein gene, complete cds
          Length = 2757

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 154 gatgaaaagaacatcaaaat 173
           ||||||||||||||||||||
Sbjct: 664 gatgaaaagaacatcaaaat 645
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>emb|AL162511.5|CNS01RHV Human chromosome 14 DNA sequence BAC R-259K15 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 165126

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 359   catcagtaatggagtttgca 378
             ||||||||||||||||||||
Sbjct: 88178 catcagtaatggagtttgca 88197
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>emb|AL359233.5|CNS05TEK Human chromosome 14 DNA sequence BAC C-2058B24 of library CalTech-D
            from chromosome 14 of Homo sapiens (Human), complete
            sequence
          Length = 167518

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 57   tctttgctttgagatggagt 76
            ||||||||||||||||||||
Sbjct: 1607 tctttgctttgagatggagt 1626
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>gb|AC004191.1|AC004191 Homo sapiens clone UWGC:y18c296 from 6p21, complete sequence
          Length = 45601

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 158   aaaagaacatcaaaatgtaa 177
             ||||||||||||||||||||
Sbjct: 21938 aaaagaacatcaaaatgtaa 21957
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>emb|AL773548.10| Mouse DNA sequence from clone RP23-70D2 on chromosome 4, complete
             sequence
          Length = 198991

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 81    tttatttaagtatcattccc 100
             ||||||||||||||||||||
Sbjct: 14545 tttatttaagtatcattccc 14526
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>emb|AL392023.3|CNS06C8J Human chromosome 14 DNA sequence BAC C-2142D14 of library CalTech-D from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 143190

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 57     tctttgctttgagatggagt 76
              ||||||||||||||||||||
Sbjct: 107630 tctttgctttgagatggagt 107649
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>dbj|AB023053.1| Homo sapiens genomic DNA, chromosome 6p21.3, HLA class I region,
            clone:53L9, complete sequence
          Length = 14868

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 158  aaaagaacatcaaaatgtaa 177
            ||||||||||||||||||||
Sbjct: 3910 aaaagaacatcaaaatgtaa 3929


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,479,803
Number of Sequences: 3902068
Number of extensions: 5479803
Number of successful extensions: 115901
Number of sequences better than 10.0: 90
Number of HSP's better than 10.0 without gapping: 90
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 115600
Number of HSP's gapped (non-prelim): 290
length of query: 584
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 561
effective length of database: 17,143,297,704
effective search space: 9617390011944
effective search space used: 9617390011944
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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