| Clone Name | rbags11m08 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | O10G6_HUMAN (Q8NH81) Olfactory receptor 10G6 (Olfactory receptor... | 32 | 1.3 | 2 | COL10_ARATH (Q9LUA9) Zinc finger protein CONSTANS-LIKE 10 | 31 | 3.8 | 3 | DOCK3_HUMAN (Q8IZD9) Dedicator of cytokinesis protein 3 (Modifie... | 30 | 4.9 | 4 | RECO_XANAC (Q8PMU8) DNA repair protein recO (Recombination prote... | 30 | 8.4 |
|---|
>O10G6_HUMAN (Q8NH81) Olfactory receptor 10G6 (Olfactory receptor OR11-280)| Length = 332 Score = 32.3 bits (72), Expect = 1.3 Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 9/79 (11%) Frame = +3 Query: 447 ISALSLMGHGYLMM-----IWRHRSASSYQCHISCRNRSFSLGILPDV----AIHSQFQS 599 I L++ G+G +++ I HR + CH+S + + S I+P + + S+ S Sbjct: 55 IYLLTVSGNGLIILTVLVDIRLHRPMCLFLCHLSFLDMTISCAIVPKMLAGFLLGSRIIS 114 Query: 600 FGXXXXXXXXYY*LGCLNC 656 FG ++ LGC C Sbjct: 115 FGGCVIQLFSFHFLGCTEC 133
>COL10_ARATH (Q9LUA9) Zinc finger protein CONSTANS-LIKE 10| Length = 373 Score = 30.8 bits (68), Expect = 3.8 Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 1/55 (1%) Frame = -2 Query: 191 VTLCIKCPWTGLDGRIS-TSRHQTWGTFRAWLIV*PTAGYKKLSVIYSLCYNLHV 30 V+LC C W+G DG+ S T+ H T + +A +LS I+S C +L++ Sbjct: 65 VSLCQNCDWSGHDGKNSTTTSHHKRQTINCYSGCPSSA---ELSSIWSFCMDLNI 116
>DOCK3_HUMAN (Q8IZD9) Dedicator of cytokinesis protein 3 (Modifier of cell| adhesion) (Presenilin-binding protein) (PBP protein) Length = 2030 Score = 30.4 bits (67), Expect = 4.9 Identities = 18/45 (40%), Positives = 22/45 (48%) Frame = +2 Query: 461 PDGAWLLDDDLAT*ICFILPVPYFLSEPELLPGYPARRCHSFTVP 595 P AW D+DL LPV Y LSE +L A+ C S + P Sbjct: 1918 PSQAWNADEDLEPPY---LPVHYSLSESAVLDSIKAQPCRSHSAP 1959
>RECO_XANAC (Q8PMU8) DNA repair protein recO (Recombination protein O)| Length = 240 Score = 29.6 bits (65), Expect = 8.4 Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 1/59 (1%) Frame = +1 Query: 268 RHAP-PQLW*AAKFIQA*RHIASKRGHTAPCTKMKQQ*ITGTCYNYQIKHESHAQKIEP 441 RH P P+L+ A + QA RH+AS + ++ + G + + ++H+S Q I+P Sbjct: 104 RHDPVPELY--ACYAQARRHLASDLPLAWGLRRFERDVLEGLGFAFDLQHDSEGQPIDP 160 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 101,770,139 Number of Sequences: 219361 Number of extensions: 2235817 Number of successful extensions: 4565 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 4421 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4563 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6370891296 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)