| Clone Name | rbags12a19 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | ASF1_YEAST (P32447) Anti-silencing protein 1 | 111 | 1e-24 | 2 | CIA1_SCHPO (O74515) Histone chaperone cia1 | 81 | 2e-15 | 3 | TBX19_MOUSE (Q99ME7) T-box transcription factor TBX19 (T-box pro... | 34 | 0.37 | 4 | TBX19_CANFA (Q5XNS0) T-box transcription factor TBX19 (T-box pro... | 33 | 0.48 | 5 | TBX19_HUMAN (O60806) T-box transcription factor TBX19 (T-box pro... | 32 | 1.1 | 6 | TBXT_CHICK (P79778) T-box-containing protein TBXT | 31 | 2.4 |
|---|
>ASF1_YEAST (P32447) Anti-silencing protein 1| Length = 279 Score = 111 bits (278), Expect = 1e-24 Identities = 50/81 (61%), Positives = 66/81 (81%) Frame = -3 Query: 562 RFVFQADPPDPLKIREEDIIGVTVLLLTCSYVGQEFMRVGYYVNNDYDDEQLREEPPAKL 383 +FVF ADPP I +++ VTV+LL+CSY G+EF+RVGYYVNN+YD+E+LRE PPAK+ Sbjct: 71 KFVFSADPPSAELIPASELVSVTVILLSCSYDGREFVRVGYYVNNEYDEEELRENPPAKV 130 Query: 382 LLDRVQRNILADKPRVTKFPI 320 +D + RNILA+KPRVT+F I Sbjct: 131 QVDHIVRNILAEKPRVTRFNI 151
>CIA1_SCHPO (O74515) Histone chaperone cia1| Length = 262 Score = 81.3 bits (199), Expect = 2e-15 Identities = 43/89 (48%), Positives = 63/89 (70%), Gaps = 6/89 (6%) Frame = -3 Query: 562 RFVFQADPPD-PLKIREEDIIGVTVLLLTCSYVGQEFMRVGYYVNNDYDDEQLREEPPA- 389 +FVF+ADPP+ L + D++GVTV+LL+C+Y EF+RVGYYVNN+ + L+E A Sbjct: 71 KFVFEADPPNIDLLPQLSDVLGVTVILLSCAYEDNEFVRVGYYVNNEMEGLNLQEMDDAE 130 Query: 388 ----KLLLDRVQRNILADKPRVTKFPINF 314 K+ + +V R+ILA+KPRVT+F I + Sbjct: 131 IKKVKVDISKVWRSILAEKPRVTRFNIQW 159
>TBX19_MOUSE (Q99ME7) T-box transcription factor TBX19 (T-box protein 19) (T-box| factor, pituitary) Length = 446 Score = 33.9 bits (76), Expect = 0.37 Identities = 17/54 (31%), Positives = 28/54 (51%) Frame = -3 Query: 502 GVTVLLLTCSYVGQEFMRVGYYVNNDYDDEQLREEPPAKLLLDRVQRNILADKP 341 G +++ CS+ +F+ V Y N + +++ P AK LD +RN L D P Sbjct: 174 GAHRMVMNCSFPETQFIAVTAYQNEEITALKIKYNPFAKAFLDAKERNHLKDVP 227
>TBX19_CANFA (Q5XNS0) T-box transcription factor TBX19 (T-box protein 19)| Length = 445 Score = 33.5 bits (75), Expect = 0.48 Identities = 17/54 (31%), Positives = 28/54 (51%) Frame = -3 Query: 502 GVTVLLLTCSYVGQEFMRVGYYVNNDYDDEQLREEPPAKLLLDRVQRNILADKP 341 G +++ CS+ +F+ V Y N + +++ P AK LD +RN L D P Sbjct: 176 GAHRMVMNCSFPETQFIAVTAYQNEEITALKIKYNPFAKAFLDAKERNHLKDIP 229
>TBX19_HUMAN (O60806) T-box transcription factor TBX19 (T-box protein 19) (T-box| factor, pituitary) Length = 448 Score = 32.3 bits (72), Expect = 1.1 Identities = 16/50 (32%), Positives = 26/50 (52%) Frame = -3 Query: 490 LLLTCSYVGQEFMRVGYYVNNDYDDEQLREEPPAKLLLDRVQRNILADKP 341 ++ CS+ +F+ V Y N + +++ P AK LD +RN L D P Sbjct: 180 MVTNCSFPETQFIAVTAYQNEEITALKIKYNPFAKAFLDAKERNHLRDVP 229
>TBXT_CHICK (P79778) T-box-containing protein TBXT| Length = 397 Score = 31.2 bits (69), Expect = 2.4 Identities = 15/50 (30%), Positives = 26/50 (52%) Frame = -3 Query: 490 LLLTCSYVGQEFMRVGYYVNNDYDDEQLREEPPAKLLLDRVQRNILADKP 341 +++ CS+ +F+ V Y N + +++ P AK LD +RN D P Sbjct: 178 MVMNCSFPETQFIAVTAYQNEEITALKIKYNPFAKAFLDAKERNHPKDAP 227 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 76,309,094 Number of Sequences: 219361 Number of extensions: 1379090 Number of successful extensions: 3471 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 3345 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3469 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5253413348 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)