| Clone Name | rbags11l14 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC005737.1| Homo sapiens chromosome 16, BAC clone 97H22 (LANL), complete sequence Length = 174098 Score = 40.1 bits (20), Expect = 1.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 gcaacaacaaaaacactggg 41 |||||||||||||||||||| Sbjct: 90455 gcaacaacaaaaacactggg 90436
>emb|AL935280.12| Zebrafish DNA sequence from clone DKEY-261J4, complete sequence Length = 221563 Score = 40.1 bits (20), Expect = 1.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 14 gcacgtccgcaacaacaaaaacac 37 |||||||||||| ||||||||||| Sbjct: 200417 gcacgtccgcaaaaacaaaaacac 200440
>gb|AC155904.1| Loxodonta africana, clone Loxodonta africana-4339475P7, complete sequence Length = 38646 Score = 40.1 bits (20), Expect = 1.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 32 aaacactgggatttgaagcc 51 |||||||||||||||||||| Sbjct: 19645 aaacactgggatttgaagcc 19664
>gb|AC105080.8| Mus musculus chromosome 3, clone RP24-313N2, complete sequence Length = 195212 Score = 38.2 bits (19), Expect = 4.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 27 aacaaaaacactgggattt 45 ||||||||||||||||||| Sbjct: 84378 aacaaaaacactgggattt 84396
>gb|AC119897.8| Mus musculus chromosome 1, clone RP24-227F14, complete sequence Length = 195375 Score = 38.2 bits (19), Expect = 4.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 26 caacaaaaacactgggatttgaa 48 |||||||| |||||||||||||| Sbjct: 93867 caacaaaagcactgggatttgaa 93889
>emb|BX897727.17| Zebrafish DNA sequence from clone DKEY-90A13 in linkage group 23, complete sequence Length = 236277 Score = 38.2 bits (19), Expect = 4.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 27 aacaaaaacactgggattt 45 ||||||||||||||||||| Sbjct: 143577 aacaaaaacactgggattt 143559
>gb|AC084821.26| Mus musculus strain C57BL/6J clone rp23-395h6 map 1, complete sequence Length = 211776 Score = 38.2 bits (19), Expect = 4.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 28 acaaaaacactgggatttg 46 ||||||||||||||||||| Sbjct: 93169 acaaaaacactgggatttg 93151
>emb|AL035079.14|HS53C18 Human DNA sequence from clone RP1-53C18 on chromosome 11p12-13 Contains the CAT gene for Catalase, the first coding exon of the ortholog of rat Ankyrin repeat protein CCA3, a Recepin partial pseudogene, and a pseudogene similar to part of DNAJ proteins (HIRIP4, DNJ3, CPR3). Contains two CpG islands, complete sequence Length = 136284 Score = 38.2 bits (19), Expect = 4.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 23 caacaacaaaaacactggg 41 ||||||||||||||||||| Sbjct: 65435 caacaacaaaaacactggg 65417
>gb|AC117661.20| Mus musculus chromosome 6, clone RP23-343P1, complete sequence Length = 180209 Score = 38.2 bits (19), Expect = 4.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 22 gcaacaacaaaaacactgg 40 ||||||||||||||||||| Sbjct: 79051 gcaacaacaaaaacactgg 79069
>ref|XM_694157.1| PREDICTED: Danio rerio similar to adenylyl cyclase type VI (LOC570652), mRNA Length = 1946 Score = 38.2 bits (19), Expect = 4.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 27 aacaaaaacactgggattt 45 ||||||||||||||||||| Sbjct: 36 aacaaaaacactgggattt 18
>ref|XM_694076.1| PREDICTED: Danio rerio similar to glucose-6-phosphate dehydrogenase (LOC570579), mRNA Length = 2850 Score = 38.2 bits (19), Expect = 4.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 27 aacaaaaacactgggattt 45 ||||||||||||||||||| Sbjct: 36 aacaaaaacactgggattt 18
>gb|AC099515.2| Homo sapiens chromosome 5 clone RP11-455D3, complete sequence Length = 150339 Score = 38.2 bits (19), Expect = 4.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 23 caacaacaaaaacactggg 41 ||||||||||||||||||| Sbjct: 11062 caacaacaaaaacactggg 11080
>dbj|AK076295.1| Mus musculus 0 day neonate skin cDNA, RIKEN full-length enriched library, clone:4632427F01 product:a disintegrin-like and metalloprotease (reprolysin type) with thrombospondin type 1 motif, 4, full insert sequence Length = 3025 Score = 38.2 bits (19), Expect = 4.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 28 acaaaaacactgggatttg 46 ||||||||||||||||||| Sbjct: 245 acaaaaacactgggatttg 263
>gb|AC113417.2| Homo sapiens chromosome 5 clone RP11-569B5, complete sequence Length = 79230 Score = 38.2 bits (19), Expect = 4.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 23 caacaacaaaaacactggg 41 ||||||||||||||||||| Sbjct: 12985 caacaacaaaaacactggg 12967
>emb|AL807769.8| Zebrafish DNA sequence from clone CH211-197G8, complete sequence Length = 188344 Score = 38.2 bits (19), Expect = 4.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 27 aacaaaaacactgggattt 45 ||||||||||||||||||| Sbjct: 104854 aacaaaaacactgggattt 104836
>gb|AC174449.2| Mus musculus BAC clone RP23-338O19 from chromosome 6, complete sequence Length = 217169 Score = 38.2 bits (19), Expect = 4.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 22 gcaacaacaaaaacactgg 40 ||||||||||||||||||| Sbjct: 45918 gcaacaacaaaaacactgg 45936 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 905,133 Number of Sequences: 3902068 Number of extensions: 905133 Number of successful extensions: 83988 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 16 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 83959 Number of HSP's gapped (non-prelim): 29 length of query: 100 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 79 effective length of database: 17,151,101,840 effective search space: 1354937045360 effective search space used: 1354937045360 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)