>PF27_MOUSE (P52875) Transmembrane protein PFT27 (TPA-regulated locus protein)|
          Length = 323

 Score = 99.0 bits (245), Expect = 9e-21
 Identities = 43/92 (46%), Positives = 63/92 (68%)
 Frame = -2

Query: 458 MQFFSPIFIKAFSITFFGEWGDKSQIATIGLAADENPFGVVIGGVIAQALCTTAAVMGGK 279
           + F SPIF++A ++TF  EWGD+SQ+ TI LAA E+P+GV +GG +   LCT  AV+GG+
Sbjct: 229 LHFISPIFVQALTLTFLAEWGDRSQLTTIVLAAREDPYGVAVGGTVGHCLCTGLAVIGGR 288

Query: 278 SLASQISEKMVELSSGVLFLLFGIMSLLSGPE 183
            +A +IS + V +  G++FL F   +L   PE
Sbjct: 289 MIAQKISVRTVTIIGGIVFLAFAFSALFISPE 320

>YD68_SCHPO (Q10320) Hypothetical UPF0016 protein C17G8.08c in chromosome I|
          Length = 287

 Score = 95.1 bits (235), Expect = 1e-19
 Identities = 44/98 (44%), Positives = 63/98 (64%)
 Frame = -2

Query: 482 KKKQRPFLMQFFSPIFIKAFSITFFGEWGDKSQIATIGLAADENPFGVVIGGVIAQALCT 303
           K K R  +   FSP+FIKAF++TF  EWGD+SQIATI +AA +N +GV +G  +  A CT
Sbjct: 188 KSKGRNVMATLFSPLFIKAFALTFVSEWGDRSQIATIAMAASDNVYGVFMGANVGHACCT 247

Query: 302 TAAVMGGKSLASQISEKMVELSSGVLFLLFGIMSLLSG 189
             AV+ GK ++++I    V    G+LF+ FG++    G
Sbjct: 248 ALAVISGKYISTKIKVHKVMFIGGILFIAFGLVYFYQG 285



 Score = 40.8 bits (94), Expect = 0.003
 Identities = 30/103 (29%), Positives = 45/103 (43%)
 Frame = -2

Query: 491 EDTKKKQRPFLMQFFSPIFIKAFSITFFGEWGDKSQIATIGLAADENPFGVVIGGVIAQA 312
           E+     R FL        I + S+ F  E GDK+ I    LA + +   V  G   A  
Sbjct: 37  EEVHPTNRDFLRSL-----IFSISMIFGCEIGDKTFIVAALLAFENSRLTVFAGSYSALF 91

Query: 311 LCTTAAVMGGKSLASQISEKMVELSSGVLFLLFGIMSLLSGPE 183
           + T   V+ G +       K+ ++  GVLF++FGI  L+   E
Sbjct: 92  IMTLLGVLLGHAAPLLFPRKLTDILGGVLFVIFGIKMLMEAKE 134

>Y615_SYNY3 (P52876) Hypothetical UPF0016 protein sll0615|
          Length = 206

 Score = 87.8 bits (216), Expect = 2e-17
 Identities = 40/80 (50%), Positives = 56/80 (70%)
 Frame = -2

Query: 440 IFIKAFSITFFGEWGDKSQIATIGLAADENPFGVVIGGVIAQALCTTAAVMGGKSLASQI 261
           I +++F++TF  EWGD++QIATI LAA  N +GV  G ++   +C   AVMGGK +A +I
Sbjct: 121 IVVESFALTFVAEWGDRTQIATIALAASNNAWGVSAGAILGHTICAVIAVMGGKFVAGRI 180

Query: 260 SEKMVELSSGVLFLLFGIMS 201
           SEK V L  G+LF LF ++S
Sbjct: 181 SEKTVTLIGGLLFYLFAVVS 200

>YB37_YEAST (P38301) Hypothetical UPF0016 protein YBR187w|
          Length = 280

 Score = 79.0 bits (193), Expect = 1e-14
 Identities = 36/82 (43%), Positives = 58/82 (70%)
 Frame = -2

Query: 449 FSPIFIKAFSITFFGEWGDKSQIATIGLAADENPFGVVIGGVIAQALCTTAAVMGGKSLA 270
           FSP++++ F + F GE GD+SQI+ I +A D + + V+ G VI  A+C+  AV+GGK LA
Sbjct: 189 FSPVWVQIFLMVFLGELGDRSQISIIAMATDSDYWYVIAGAVIGHAICSGLAVVGGKLLA 248

Query: 269 SQISEKMVELSSGVLFLLFGIM 204
           ++IS + + L+S +LF +F +M
Sbjct: 249 TRISIRTITLASSLLFFIFALM 270



 Score = 34.3 bits (77), Expect = 0.28
 Identities = 22/85 (25%), Positives = 39/85 (45%)
 Frame = -2

Query: 437 FIKAFSITFFGEWGDKSQIATIGLAADENPFGVVIGGVIAQALCTTAAVMGGKSLASQIS 258
           F+ + S+    E GDK+ +    +A       V      + A+ T  + + G S  + +S
Sbjct: 42  FLMSVSMIGLSEIGDKTFLIAALMAMRHKRVLVFSAAATSLAIMTILSGVVGHSAVAFLS 101

Query: 257 EKMVELSSGVLFLLFGIMSLLSGPE 183
           E+     +G+LFL+FG    + G E
Sbjct: 102 ERYTAFFAGILFLVFGYKLTMEGLE 126

>FLP_ZYGBI (P13784) Recombinase Flp protein|
          Length = 568

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 19/65 (29%), Positives = 30/65 (46%)
 Frame = +3

Query: 78  FRRHHPSNKVSLVTTPVGHAGWRVLPKFLEKLQLPFWS*QQGHYAEQQEQHPARQFNHLL 257
           FR+   S   ++   P  H G  ++  FL K +L  W+   G+++  Q Q   R+    L
Sbjct: 281 FRKFPASPIFAIKHGPKSHLGRHLMNSFLHKNELDSWANSLGNWSSSQNQ---RESGARL 337

Query: 258 GYLRG 272
           GY  G
Sbjct: 338 GYTHG 342

>AMT14_ARATH (Q9SVT8) Ammonium transporter 1, member 4 (AtAMT1;4)|
          Length = 504

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 5/86 (5%)
 Frame = -2

Query: 428 AFSITFFGEWGDKSQIATIGLAADENPFGVVIGGVIAQALCTTAAVMGGKSLASQISEKM 249
           A+ I F G + +K  IA I       PFG+++GG             GG+ LA+ + + +
Sbjct: 388 AWGIIFTGLFAEKRYIAEIFGGDPNRPFGLLMGG-------------GGRLLAAHVVQIL 434

Query: 248 -----VELSSGVLFLLFGIMSLLSGP 186
                V ++ G LF +   + LL  P
Sbjct: 435 VITGWVSVTMGTLFFILHKLKLLRIP 460

>LDLR_HUMAN (P01130) Low-density lipoprotein receptor precursor (LDL receptor)|
          Length = 860

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 14/23 (60%), Positives = 15/23 (65%)
 Frame = +1

Query: 136 LAGECCRSSWRNYNCPSGPDNKD 204
           L+GEC  SSWR   C  GPD KD
Sbjct: 205 LSGECIHSSWR---CDGGPDCKD 224

>PCP_HAEIN (P10325) Outer membrane lipoprotein pcp precursor (15 kDa|
           lipoprotein) (PAL cross-reacting lipoprotein)
          Length = 155

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 17/55 (30%), Positives = 26/55 (47%)
 Frame = -2

Query: 383 IATIGLAADENPFGVVIGGVIAQALCTTAAVMGGKSLASQISEKMVELSSGVLFL 219
           + T+G  A     G  IGG   QA+      +GG    S+I EKM +++   L +
Sbjct: 62  VGTLGGGALGGIAGSTIGGGRGQAIAAVVGAIGGAIAGSKIEEKMSQVNGAELVI 116

>HERC2_MOUSE (Q4U2R1) HECT domain and RCC1-like domain-containing protein 2|
          Length = 4836

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 20/74 (27%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
 Frame = +1

Query: 178  CPSGPDNKDIMPNNRNSTPL--DNSTIFSDI*EARLFPPI---TAAVVQSA*AMTPPMTT 342
            CPS   +      +  ++P+  ++ST+ +D+ E RL P +      +V S  A+TP   T
Sbjct: 3429 CPSFSSSAPASDVSAMASPMHMEDSTLAADL-EDRLSPNLWQEKREIVSSEDAVTPSAVT 3487

Query: 343  PNGFSSAAKPIVAI 384
            P+  S++++P + +
Sbjct: 3488 PSAPSASSRPFIPV 3501

>MUC2_HUMAN (Q02817) Mucin-2 precursor (Intestinal mucin 2)|
          Length = 5179

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
 Frame = +1

Query: 142  GECCRSSWRNYNCPSGPDNKDIM--PNNRNSTPLDNSTIFS 258
            GECC+   + +     PDN+ ++  P +  S P +N T FS
Sbjct: 4984 GECCKKCEQTHCIIKRPDNQHVILKPGDFKSDPKNNCTFFS 5024

>DAC_ACTSP (P39045) D-alanyl-D-alanine carboxypeptidase precursor (EC|
           3.4.16.4) (DD-peptidase) (DD-carboxypeptidase)
          Length = 538

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 20/71 (28%), Positives = 35/71 (49%)
 Frame = -2

Query: 380 ATIGLAADENPFGVVIGGVIAQALCTTAAVMGGKSLASQISEKMVELSSGVLFLLFGIMS 201
           A++ +A + +PF   +GG +A  +  TAA            E +VE  +G +  +  +  
Sbjct: 427 ASLPVAGESDPF---VGGTLANRMRGTAA------------EGVVEAKTGTMSGVSALSG 471

Query: 200 LLSGPEGQL*F 168
            + GPEG+L F
Sbjct: 472 YVPGPEGELAF 482

>PGM_NEIMB (P40391) Phosphoglucomutase (EC 5.4.2.2) (Glucose phosphomutase)|
           (PGM)
          Length = 460

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 17/51 (33%), Positives = 28/51 (54%)
 Frame = -2

Query: 335 IGGVIAQALCTTAAVMGGKSLASQISEKMVELSSGVLFLLFGIMSLLSGPE 183
           I G++ + L   AA + GK++A++ +EK      G+  +  G    LSGPE
Sbjct: 14  IRGIVGKTLTDEAAYLIGKAIAAKAAEK------GITRIALGRDGRLSGPE 58

>SOMA_ORENI (P13391) Somatotropin precursor (Growth hormone)|
          Length = 204

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 12/27 (44%), Positives = 20/27 (74%)
 Frame = -2

Query: 296 AVMGGKSLASQISEKMVELSSGVLFLL 216
           ++ GG SL +QIS ++ EL +G+L L+
Sbjct: 108 SLSGGSSLRNQISPRLSELKTGILLLI 134

>SOMA_OREMO (P34746) Somatotropin precursor (Growth hormone)|
          Length = 204

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 12/27 (44%), Positives = 20/27 (74%)
 Frame = -2

Query: 296 AVMGGKSLASQISEKMVELSSGVLFLL 216
           ++ GG SL +QIS ++ EL +G+L L+
Sbjct: 108 SLSGGSSLRNQISPRLSELKTGILLLI 134

>DOA_DROME (P49762) Serine/threonine-protein kinase Doa (EC 2.7.12.1) (Protein|
           darkener of apricot)
          Length = 832

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 20/57 (35%), Positives = 27/57 (47%)
 Frame = +3

Query: 213 EQQEQHPARQFNHLLGYLRGQALPSHHGSGSAECLSYDSPNDHTKWVLISSQANRSN 383
           +QQ+QHP  QF         Q   +  G G A  L YD PN +T+    S  ++ SN
Sbjct: 354 QQQQQHPHTQF---------QNASAGGGGGGAAGLQYD-PNTNTQLFYASPASSSSN 400


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 75,995,279
Number of Sequences: 219361
Number of extensions: 1507118
Number of successful extensions: 4740
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 4548
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4733
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5196311029
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)