ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags12a10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY104314.1| Zea mays PCO075251 mRNA sequence 335 1e-88
2ref|XM_482544.1| Oryza sativa (japonica cultivar-group), mRNA 224 3e-55
3dbj|AK066308.1| Oryza sativa (japonica cultivar-group) cDNA clon... 224 3e-55
4ref|NM_102363.1| Arabidopsis thaliana unknown protein AT1G25520 ... 98 4e-17
5gb|BT004436.1| Arabidopsis thaliana clone U20278 putative transm... 98 4e-17
6gb|AY088057.1| Arabidopsis thaliana clone 40780 mRNA, complete s... 98 4e-17
7gb|BT002846.1| Arabidopsis thaliana clone RAFL15-01-N15 (R20278)... 98 4e-17
8dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 78 4e-11
9dbj|AP004666.4| Oryza sativa (japonica cultivar-group) genomic D... 78 4e-11
10ref|NM_105537.3| Arabidopsis thaliana unknown protein AT1G68650 ... 68 4e-08
11gb|BT024926.1| Arabidopsis thaliana At1g68650 mRNA, complete cds 68 4e-08
12emb|BX817813.1|CNS0AAIH Arabidopsis thaliana Full-length cDNA Co... 68 4e-08
13dbj|AK118742.1| Arabidopsis thaliana At1g68650 mRNA for putative... 68 4e-08
14emb|AL121952.18|HSDJ472M2 Human DNA sequence from clone RP3-472M... 44 0.52
15gb|AC021198.2|F14D7 Sequence of BAC F14D7 from Arabidopsis thali... 44 0.52
16gb|AC009343.9| Drosophila melanogaster clone BACR08L17, complete... 42 2.1
17ref|NM_114586.2| Arabidopsis thaliana 1-aminocyclopropane-1-carb... 42 2.1
18gb|AC114982.2| Homo sapiens chromosome 5 clone RP11-95I19, compl... 42 2.1
19emb|AL133292.3|ATF13I12 Arabidopsis thaliana DNA chromosome 3, B... 42 2.1
20gb|AF192304.6| Homo sapiens chromosome 8 clone CTC-458A3 map 8q2... 42 2.1
21gb|AC016605.6| Homo sapiens chromosome 5 clone CTD-2154D21, comp... 42 2.1
22gb|AC008917.6|AC008917 Homo sapiens chromosome 5 clone CTD-2273I... 42 2.1
23emb|BX826009.1|CNS0A66X Arabidopsis thaliana Full-length cDNA Co... 42 2.1
24gb|AC097649.3| Homo sapiens BAC clone RP11-92D1 from 4, complete... 42 2.1
25gb|AC016637.7| Homo sapiens chromosome 5 clone RP11-34J15, compl... 42 2.1
26gb|AE003828.4| Drosophila melanogaster chromosome 2R, section 22... 42 2.1
27dbj|AP000901.5| Homo sapiens genomic DNA, chromosome 11 clone:RP... 42 2.1
28dbj|AP002788.3| Homo sapiens genomic DNA, chromosome 11q, clone:... 42 2.1
29gb|AC140791.4| Gallus gallus BAC clone TAM33-20G4 from chromosom... 42 2.1
30gb|AC111097.10| Mus musculus chromosome 3, clone RP23-174G7, com... 40 8.1
31gb|AF525764.1| Aegilops tauschii subsp. strangulata SBE I pseudo... 40 8.1
32gb|AC159228.2| Mus musculus BAC clone RP24-338I14 from chromosom... 40 8.1
33gb|U39855.1| Caenorhabditis elegans cosmid F18G5, complete sequence 40 8.1
34gb|AC005528.43| Mus musculus strain 129S6/SvEvTac clone rp21-493... 40 8.1
35gb|AC073873.7| Homo sapiens BAC clone RP11-575M4 from 7, complet... 40 8.1
36gb|AC126030.3| Mus musculus BAC clone RP23-452N11 from chromosom... 40 8.1
37gb|AC122304.4| Mus musculus BAC clone RP23-283G11 from 18, compl... 40 8.1
38gb|AC144343.8| Medicago truncatula clone mth2-12c21, complete se... 40 8.1
39emb|BX927062.11| Zebrafish DNA sequence from clone CH211-227N20 ... 40 8.1
40emb|AL031291.3|HS796F18 Human DNA sequence from clone RP4-796F18... 40 8.1
41emb|AL645845.14| Mouse DNA sequence from clone RP23-338J18 on ch... 40 8.1
42gb|AC147271.3| Pan troglodytes BAC clone RP43-121F15 from chromo... 40 8.1
43gb|AF359522.1|AF359522 Vitis vinifera inward rectifying potassiu... 40 8.1
44gb|AC156641.2| Mus musculus BAC clone RP23-204J8 from chromosome... 40 8.1
45gb|AE010300.1| Leptospira interrogans serovar lai str. 56601 chr... 40 8.1
46gb|AF250370.1|AF250369S2 Mus musculus phosphofructokinase-1 C is... 40 8.1
47gb|AC139109.1| Homo sapiens chromosome 5 clone RP11-887F16, comp... 40 8.1
48gb|AC136612.2| Homo sapiens chromosome 16 clone RP11-319D11, com... 40 8.1
49gb|AC133939.4| Mus musculus BAC clone RP23-402F1 from chromosome... 40 8.1
50emb|BX005065.10| Zebrafish DNA sequence from clone CH211-163B2 i... 40 8.1
51gb|AC112944.7| Mus musculus chromosome 5, clone RP23-411F8, comp... 40 8.1
52gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, c... 40 8.1
53gb|AC155928.2| Mus musculus BAC clone RP24-70N20 from 9, complet... 40 8.1
54tpe|BN000728.1| TPA: TPA_exp: Canis familiaris col6a3 gene for c... 40 8.1
55gb|AC027354.3| Homo sapiens chromosome 16 clone RP11-179H7, comp... 40 8.1
56gb|AE016823.1| Leptospira interrogans serovar Copenhageni str. F... 40 8.1
57emb|BX284693.6| Zebrafish DNA sequence from clone DKEY-179M13 in... 40 8.1
58emb|AJ920047.1| Canis familiaris melanophilin gene locus, breed ... 40 8.1
59gb|AC147562.5| Mus musculus BAC clone RP23-239A13 from 3, comple... 40 8.1
60gb|AC173481.1| Mus musculus BAC clone RP23-411A24 from chromosom... 40 8.1
61gb|AC158363.2| Mus musculus BAC clone RP23-214J3 from chromosome... 40 8.1 
>gb|AY104314.1| Zea mays PCO075251 mRNA sequence
          Length = 1241

 Score =  335 bits (169), Expect = 1e-88
 Identities = 352/413 (85%)
 Strand = Plus / Minus

                                                                       
Query: 185 ctggtcctgacaacaaggacattatgccgaacaacaggaacagcaccccgctcgacaatt 244
           ||||||| || | ||| ||||| || || |||| |||||| || || ||||| |||| ||
Sbjct: 821 ctggtccagagagcaatgacatgataccaaacagcaggaagagaactccgcttgacagtt 762

                                                                       
Query: 245 caaccatcttctcggatatctgagaggccaggctcttccctcccatcacggcagcggtag 304
           | |||||||||||||||||||| || || |||||||| || || |  || ||||| ||||
Sbjct: 761 cgaccatcttctcggatatctgggaagctaggctctttccaccaagaacagcagcagtag 702

                                                                       
Query: 305 tgcagagtgcttgagctatgactcccccaatgaccacaccaaatgggttctcatcagcag 364
           ||||||||||||| ||||||| ||| || | ||| |||||||||||||| ||||||||||
Sbjct: 701 tgcagagtgcttgcgctatgattccgcccaggacaacaccaaatgggttttcatcagcag 642

                                                                       
Query: 365 ccaagccaatcgtagcaatctggctcttgtcaccccactcgccaaagaaagtgatggaaa 424
           |||||||||| ||||||||||||||||||||||||||||| |||||||| || || ||||
Sbjct: 641 ccaagccaatagtagcaatctggctcttgtcaccccactcaccaaagaatgtaatagaaa 582

                                                                       
Query: 425 atgccttgataaaaattggtgagaagaactgcatgagaaatggcctttgctttttctttg 484
           ||||||| || ||||||||||||||||| |||||||||||||| ||||||| |||||| |
Sbjct: 581 atgcctttatgaaaattggtgagaagaattgcatgagaaatggtctttgctgtttcttcg 522

                                                                       
Query: 485 tatcctcagttgcctttgatttattttttgattcccctttgttgctcttaaagtccgcat 544
           |||| ||  ||||||| | |||| |||| ||||| ||||| || ||||||||| | ||||
Sbjct: 521 tatcatcgtttgccttagttttagttttagattcgcctttattactcttaaagacagcat 462

                                                                
Query: 545 ccagctttgcttccaattcagccaagtcttctgactctccttcttctttgaag 597
           |||||| |||||| | ||||||||| |||||||| ||||| ||||| ||||||
Sbjct: 461 ccagctctgcttcaacttcagccaattcttctgaatctccatcttccttgaag 409
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>ref|XM_482544.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1278

 Score =  224 bits (113), Expect = 3e-55
 Identities = 233/273 (85%)
 Strand = Plus / Minus

                                                                       
Query: 325 actcccccaatgaccacaccaaatgggttctcatcagcagccaagccaatcgtagcaatc 384
           |||||||| | ||| ||||| ||||| || |||||||||||||| ||||| |||||||| 
Sbjct: 647 actccccccaggacaacaccgaatggattttcatcagcagccaaaccaatagtagcaatt 588

                                                                       
Query: 385 tggctcttgtcaccccactcgccaaagaaagtgatggaaaatgccttgataaaaattggt 444
           || ||||| ||||||||||| |||||||| || |||||||||||||| ||||| ||||||
Sbjct: 587 tgactcttatcaccccactctccaaagaatgtaatggaaaatgcctttataaagattggt 528

                                                                       
Query: 445 gagaagaactgcatgagaaatggcctttgctttttctttgtatcctcagttgcctttgat 504
           |||||||||||||  | |||||| |||||||  |||||| |||| ||| ||||||| |||
Sbjct: 527 gagaagaactgcaaaacaaatggtctttgctgcttctttttatcatcatttgccttagat 468

                                                                       
Query: 505 ttattttttgattcccctttgttgctcttaaagtccgcatccagctttgcttccaattca 564
           ||| |||| |||||  |||||||||| ||||| |  ||||||||||  ||||||| ||||
Sbjct: 467 ttacttttcgattctgctttgttgcttttaaaattagcatccagctcagcttccacttca 408

                                            
Query: 565 gccaagtcttctgactctccttcttctttgaag 597
           ||||| |||||||| ||||| ||||||||||||
Sbjct: 407 gccaattcttctgaatctccatcttctttgaag 375



 Score =  113 bits (57), Expect = 7e-22
 Identities = 117/137 (85%)
 Strand = Plus / Minus

                                                                       
Query: 181 ccttctggtcctgacaacaaggacattatgccgaacaacaggaacagcaccccgctcgac 240
           |||||||||||||||||  | ||||| || || |||| |||||| ||||| || ||||||
Sbjct: 873 ccttctggtcctgacaagtatgacatgataccaaacagcaggaatagcactccactcgac 814

                                                                       
Query: 241 aattcaaccatcttctcggatatctgagaggccaggctcttccctcccatcacggcagcg 300
           ||| | ||||| ||||| ||||| |||||||||| ||| ||||| ||||| || ||||||
Sbjct: 813 aatccgaccattttctcagatatttgagaggccaagcttttcccacccataacagcagcg 754

                            
Query: 301 gtagtgcagagtgcttg 317
           |||||||||||||||||
Sbjct: 753 gtagtgcagagtgcttg 737
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>dbj|AK066308.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013061I19, full
           insert sequence
          Length = 1279

 Score =  224 bits (113), Expect = 3e-55
 Identities = 233/273 (85%)
 Strand = Plus / Minus

                                                                       
Query: 325 actcccccaatgaccacaccaaatgggttctcatcagcagccaagccaatcgtagcaatc 384
           |||||||| | ||| ||||| ||||| || |||||||||||||| ||||| |||||||| 
Sbjct: 647 actccccccaggacaacaccgaatggattttcatcagcagccaaaccaatagtagcaatt 588

                                                                       
Query: 385 tggctcttgtcaccccactcgccaaagaaagtgatggaaaatgccttgataaaaattggt 444
           || ||||| ||||||||||| |||||||| || |||||||||||||| ||||| ||||||
Sbjct: 587 tgactcttatcaccccactctccaaagaatgtaatggaaaatgcctttataaagattggt 528

                                                                       
Query: 445 gagaagaactgcatgagaaatggcctttgctttttctttgtatcctcagttgcctttgat 504
           |||||||||||||  | |||||| |||||||  |||||| |||| ||| ||||||| |||
Sbjct: 527 gagaagaactgcaaaacaaatggtctttgctgcttctttttatcatcatttgccttagat 468

                                                                       
Query: 505 ttattttttgattcccctttgttgctcttaaagtccgcatccagctttgcttccaattca 564
           ||| |||| |||||  |||||||||| ||||| |  ||||||||||  ||||||| ||||
Sbjct: 467 ttacttttcgattctgctttgttgcttttaaaattagcatccagctcagcttccacttca 408

                                            
Query: 565 gccaagtcttctgactctccttcttctttgaag 597
           ||||| |||||||| ||||| ||||||||||||
Sbjct: 407 gccaattcttctgaatctccatcttctttgaag 375



 Score =  113 bits (57), Expect = 7e-22
 Identities = 117/137 (85%)
 Strand = Plus / Minus

                                                                       
Query: 181 ccttctggtcctgacaacaaggacattatgccgaacaacaggaacagcaccccgctcgac 240
           |||||||||||||||||  | ||||| || || |||| |||||| ||||| || ||||||
Sbjct: 873 ccttctggtcctgacaagtatgacatgataccaaacagcaggaatagcactccactcgac 814

                                                                       
Query: 241 aattcaaccatcttctcggatatctgagaggccaggctcttccctcccatcacggcagcg 300
           ||| | ||||| ||||| ||||| |||||||||| ||| ||||| ||||| || ||||||
Sbjct: 813 aatccgaccattttctcagatatttgagaggccaagcttttcccacccataacagcagcg 754

                            
Query: 301 gtagtgcagagtgcttg 317
           |||||||||||||||||
Sbjct: 753 gtagtgcagagtgcttg 737
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>ref|NM_102363.1| Arabidopsis thaliana unknown protein AT1G25520 mRNA, complete cds
          Length = 1167

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 106/125 (84%)
 Strand = Plus / Minus

                                                                       
Query: 325 actcccccaatgaccacaccaaatgggttctcatcagcagccaagccaatcgtagcaatc 384
           ||||| |||| |||||| |||||||| || ||||| ||||| || ||||| ||||||| |
Sbjct: 729 actccaccaaggaccaccccaaatggattttcatctgcagctaaaccaattgtagcaagc 670

                                                                       
Query: 385 tggctcttgtcaccccactcgccaaagaaagtgatggaaaatgccttgataaaaattggt 444
           || |||||||||||||| || ||||||||| | || ||||| ||||||| ||||||||| 
Sbjct: 669 tgactcttgtcaccccattctccaaagaaattaatcgaaaaagccttgagaaaaattgga 610

                
Query: 445 gagaa 449
           |||||
Sbjct: 609 gagaa 605
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>gb|BT004436.1| Arabidopsis thaliana clone U20278 putative transmembrane protein
           (At1g25520) mRNA, complete cds
          Length = 724

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 106/125 (84%)
 Strand = Plus / Minus

                                                                       
Query: 325 actcccccaatgaccacaccaaatgggttctcatcagcagccaagccaatcgtagcaatc 384
           ||||| |||| |||||| |||||||| || ||||| ||||| || ||||| ||||||| |
Sbjct: 545 actccaccaaggaccaccccaaatggattttcatctgcagctaaaccaattgtagcaagc 486

                                                                       
Query: 385 tggctcttgtcaccccactcgccaaagaaagtgatggaaaatgccttgataaaaattggt 444
           || |||||||||||||| || ||||||||| | || ||||| ||||||| ||||||||| 
Sbjct: 485 tgactcttgtcaccccattctccaaagaaattaatcgaaaaagccttgagaaaaattgga 426

                
Query: 445 gagaa 449
           |||||
Sbjct: 425 gagaa 421
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>gb|AY088057.1| Arabidopsis thaliana clone 40780 mRNA, complete sequence
          Length = 1167

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 106/125 (84%)
 Strand = Plus / Minus

                                                                       
Query: 325 actcccccaatgaccacaccaaatgggttctcatcagcagccaagccaatcgtagcaatc 384
           ||||| |||| |||||| |||||||| || ||||| ||||| || ||||| ||||||| |
Sbjct: 729 actccaccaaggaccaccccaaatggattttcatctgcagctaaaccaattgtagcaagc 670

                                                                       
Query: 385 tggctcttgtcaccccactcgccaaagaaagtgatggaaaatgccttgataaaaattggt 444
           || |||||||||||||| || ||||||||| | || ||||| ||||||| ||||||||| 
Sbjct: 669 tgactcttgtcaccccattctccaaagaaattaatcgaaaaagccttgagaaaaattgga 610

                
Query: 445 gagaa 449
           |||||
Sbjct: 609 gagaa 605
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>gb|BT002846.1| Arabidopsis thaliana clone RAFL15-01-N15 (R20278) putative
           transmembrane protein (At1g25520) mRNA, complete cds
          Length = 1086

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 106/125 (84%)
 Strand = Plus / Minus

                                                                       
Query: 325 actcccccaatgaccacaccaaatgggttctcatcagcagccaagccaatcgtagcaatc 384
           ||||| |||| |||||| |||||||| || ||||| ||||| || ||||| ||||||| |
Sbjct: 725 actccaccaaggaccaccccaaatggattttcatctgcagctaaaccaattgtagcaagc 666

                                                                       
Query: 385 tggctcttgtcaccccactcgccaaagaaagtgatggaaaatgccttgataaaaattggt 444
           || |||||||||||||| || ||||||||| | || ||||| ||||||| ||||||||| 
Sbjct: 665 tgactcttgtcaccccattctccaaagaaattaatcgaaaaagccttgagaaaaattgga 606

                
Query: 445 gagaa 449
           |||||
Sbjct: 605 gagaa 601
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 63/71 (88%)
 Strand = Plus / Plus

                                                                            
Query: 247      accatcttctcggatatctgagaggccaggctcttccctcccatcacggcagcggtagtg 306
                ||||| ||||| ||||| |||||||||| ||| ||||| ||||| || ||||||||||||
Sbjct: 20993394 accattttctcagatatttgagaggccaagcttttcccacccataacagcagcggtagtg 20993453

                           
Query: 307      cagagtgcttg 317
                |||||||||||
Sbjct: 20993454 cagagtgcttg 20993464



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 54/62 (87%)
 Strand = Plus / Plus

                                                                            
Query: 325      actcccccaatgaccacaccaaatgggttctcatcagcagccaagccaatcgtagcaatc 384
                |||||||| | ||| ||||| ||||| || |||||||||||||| ||||| |||||||||
Sbjct: 20993554 actccccccaggacaacaccgaatggattttcatcagcagccaaaccaatagtagcaatc 20993613

                  
Query: 385      tg 386
                ||
Sbjct: 20993614 tg 20993615



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 61/72 (84%)
 Strand = Plus / Plus

                                                                            
Query: 428      ccttgataaaaattggtgagaagaactgcatgagaaatggcctttgctttttctttgtat 487
                |||| ||||| |||||||||||||||||||  | |||||| |||||||  |||||| |||
Sbjct: 20993847 cctttataaagattggtgagaagaactgcaaaacaaatggtctttgctgcttctttttat 20993906

                            
Query: 488      cctcagttgcct 499
                | ||| ||||||
Sbjct: 20993907 catcatttgcct 20993918



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                           
Query: 388      ctcttgtcaccccactcgccaaagaaagtgatggaaaatgcct 430
                ||||| ||||||||||| |||||||| || |||||||||||||
Sbjct: 20993690 ctcttatcaccccactctccaaagaatgtaatggaaaatgcct 20993732



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 53/63 (84%)
 Strand = Plus / Plus

                                                                            
Query: 181      ccttctggtcctgacaacaaggacattatgccgaacaacaggaacagcaccccgctcgac 240
                |||||||||||||||||  | ||||| || || |||| |||||| ||||| || ||||||
Sbjct: 20993240 ccttctggtcctgacaagtatgacatgataccaaacagcaggaatagcactccactcgac 20993299

                   
Query: 241      aat 243
                |||
Sbjct: 20993300 aat 20993302
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>dbj|AP004666.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0431A03
          Length = 149500

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 63/71 (88%)
 Strand = Plus / Plus

                                                                         
Query: 247   accatcttctcggatatctgagaggccaggctcttccctcccatcacggcagcggtagtg 306
             ||||| ||||| ||||| |||||||||| ||| ||||| ||||| || ||||||||||||
Sbjct: 59569 accattttctcagatatttgagaggccaagcttttcccacccataacagcagcggtagtg 59628

                        
Query: 307   cagagtgcttg 317
             |||||||||||
Sbjct: 59629 cagagtgcttg 59639



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 54/62 (87%)
 Strand = Plus / Plus

                                                                         
Query: 325   actcccccaatgaccacaccaaatgggttctcatcagcagccaagccaatcgtagcaatc 384
             |||||||| | ||| ||||| ||||| || |||||||||||||| ||||| |||||||||
Sbjct: 59729 actccccccaggacaacaccgaatggattttcatcagcagccaaaccaatagtagcaatc 59788

               
Query: 385   tg 386
             ||
Sbjct: 59789 tg 59790



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 61/72 (84%)
 Strand = Plus / Plus

                                                                         
Query: 428   ccttgataaaaattggtgagaagaactgcatgagaaatggcctttgctttttctttgtat 487
             |||| ||||| |||||||||||||||||||  | |||||| |||||||  |||||| |||
Sbjct: 60022 cctttataaagattggtgagaagaactgcaaaacaaatggtctttgctgcttctttttat 60081

                         
Query: 488   cctcagttgcct 499
             | ||| ||||||
Sbjct: 60082 catcatttgcct 60093



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                        
Query: 388   ctcttgtcaccccactcgccaaagaaagtgatggaaaatgcct 430
             ||||| ||||||||||| |||||||| || |||||||||||||
Sbjct: 59865 ctcttatcaccccactctccaaagaatgtaatggaaaatgcct 59907



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 53/63 (84%)
 Strand = Plus / Plus

                                                                         
Query: 181   ccttctggtcctgacaacaaggacattatgccgaacaacaggaacagcaccccgctcgac 240
             |||||||||||||||||  | ||||| || || |||| |||||| ||||| || ||||||
Sbjct: 59415 ccttctggtcctgacaagtatgacatgataccaaacagcaggaatagcactccactcgac 59474

                
Query: 241   aat 243
             |||
Sbjct: 59475 aat 59477
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>ref|NM_105537.3| Arabidopsis thaliana unknown protein AT1G68650 mRNA, complete cds
          Length = 955

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 82/98 (83%)
 Strand = Plus / Minus

                                                                       
Query: 355 tcatcagcagccaagccaatcgtagcaatctggctcttgtcaccccactcgccaaagaaa 414
           ||||| |||||||| ||||| || |||| ||| |||||||||||||| || |||||||| 
Sbjct: 586 tcatctgcagccaaaccaatggtcgcaagctgactcttgtcaccccattcaccaaagaag 527

                                                 
Query: 415 gtgatggaaaatgccttgataaaaattggtgagaagaa 452
            | || ||||| ||||||| |||||| || ||||||||
Sbjct: 526 ttaatcgaaaacgccttgagaaaaatgggagagaagaa 489
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>gb|BT024926.1| Arabidopsis thaliana At1g68650 mRNA, complete cds
          Length = 687

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 82/98 (83%)
 Strand = Plus / Minus

                                                                       
Query: 355 tcatcagcagccaagccaatcgtagcaatctggctcttgtcaccccactcgccaaagaaa 414
           ||||| |||||||| ||||| || |||| ||| |||||||||||||| || |||||||| 
Sbjct: 509 tcatctgcagccaaaccaatggtcgcaagctgactcttgtcaccccattcaccaaagaag 450

                                                 
Query: 415 gtgatggaaaatgccttgataaaaattggtgagaagaa 452
            | || ||||| ||||||| |||||| || ||||||||
Sbjct: 449 ttaatcgaaaacgccttgagaaaaatgggagagaagaa 412
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>emb|BX817813.1|CNS0AAIH Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL43ZA11 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 952

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 82/98 (83%)
 Strand = Plus / Minus

                                                                       
Query: 355 tcatcagcagccaagccaatcgtagcaatctggctcttgtcaccccactcgccaaagaaa 414
           ||||| |||||||| ||||| || |||| ||| |||||||||||||| || |||||||| 
Sbjct: 586 tcatctgcagccaaaccaatggtcgcaagctgactcttgtcaccccattcaccaaagaag 527

                                                 
Query: 415 gtgatggaaaatgccttgataaaaattggtgagaagaa 452
            | || ||||| ||||||| |||||| || ||||||||
Sbjct: 526 ttaatcgaaaacgccttgagaaaaatgggagagaagaa 489
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>dbj|AK118742.1| Arabidopsis thaliana At1g68650 mRNA for putative transmembrane
           protein, complete cds, clone: RAFL21-09-G03
          Length = 940

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 82/98 (83%)
 Strand = Plus / Minus

                                                                       
Query: 355 tcatcagcagccaagccaatcgtagcaatctggctcttgtcaccccactcgccaaagaaa 414
           ||||| |||||||| ||||| || |||| ||| |||||||||||||| || |||||||| 
Sbjct: 571 tcatctgcagccaaaccaatggtcgcaagctgactcttgtcaccccattcaccaaagaag 512

                                                 
Query: 415 gtgatggaaaatgccttgataaaaattggtgagaagaa 452
            | || ||||| ||||||| |||||| || ||||||||
Sbjct: 511 ttaatcgaaaacgccttgagaaaaatgggagagaagaa 474
to top
>emb|AL121952.18|HSDJ472M2 Human DNA sequence from clone RP3-472M2 on chromosome 6q25.1-26
             Contains the 3' end of the gene for KIAA1116 and a
             ribosomal protein L17 (60S ribosomal protein L17)
             (RPL17)(rpL17) pseudogene, complete sequence
          Length = 107506

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 425   atgccttgataaaaattggtga 446
             ||||||||||||||||||||||
Sbjct: 35391 atgccttgataaaaattggtga 35412
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>gb|AC021198.2|F14D7 Sequence of BAC F14D7 from Arabidopsis thaliana chromosome 1,
            complete sequence
          Length = 81513

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 27   ttgttgactaaactaatgaatc 48
            ||||||||||||||||||||||
Sbjct: 9335 ttgttgactaaactaatgaatc 9356
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>gb|AC009343.9| Drosophila melanogaster clone BACR08L17, complete sequence
          Length = 182492

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 504    tttattttttgattccccttt 524
              |||||||||||||||||||||
Sbjct: 127837 tttattttttgattccccttt 127817
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>ref|NM_114586.2| Arabidopsis thaliana 1-aminocyclopropane-1-carboxylate oxidase/ iron
            ion binding / isopenicillin-N synthase AT3G47190 mRNA,
            complete cds
          Length = 1152

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 470  tttgctttttctttgtatcct 490
            |||||||||||||||||||||
Sbjct: 1060 tttgctttttctttgtatcct 1080
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>gb|AC114982.2| Homo sapiens chromosome 5 clone RP11-95I19, complete sequence
          Length = 175079

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 27     ttgttgactaaactaatgaat 47
              |||||||||||||||||||||
Sbjct: 120481 ttgttgactaaactaatgaat 120461
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>emb|AL133292.3|ATF13I12 Arabidopsis thaliana DNA chromosome 3, BAC clone F13I12
          Length = 140680

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 470   tttgctttttctttgtatcct 490
             |||||||||||||||||||||
Sbjct: 91899 tttgctttttctttgtatcct 91879
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>gb|AF192304.6| Homo sapiens chromosome 8 clone CTC-458A3 map 8q24.3, complete sequence
          Length = 177028

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 463   aatggcctttgctttttcttt 483
             |||||||||||||||||||||
Sbjct: 52572 aatggcctttgctttttcttt 52592
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>gb|AC016605.6| Homo sapiens chromosome 5 clone CTD-2154D21, complete sequence
          Length = 120871

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 27    ttgttgactaaactaatgaat 47
             |||||||||||||||||||||
Sbjct: 24973 ttgttgactaaactaatgaat 24993
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>gb|AC008917.6|AC008917 Homo sapiens chromosome 5 clone CTD-2273I21, complete sequence
          Length = 123050

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 27    ttgttgactaaactaatgaat 47
             |||||||||||||||||||||
Sbjct: 98081 ttgttgactaaactaatgaat 98061
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>emb|BX826009.1|CNS0A66X Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTSIL79ZD02 of Silique of strain col-0 of Arabidopsis
            thaliana (thale cress)
          Length = 1152

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 470  tttgctttttctttgtatcct 490
            |||||||||||||||||||||
Sbjct: 1060 tttgctttttctttgtatcct 1080
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>gb|AC097649.3| Homo sapiens BAC clone RP11-92D1 from 4, complete sequence
          Length = 103242

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 267   agaggccaggctcttccctcc 287
             |||||||||||||||||||||
Sbjct: 30935 agaggccaggctcttccctcc 30915
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>gb|AC016637.7| Homo sapiens chromosome 5 clone RP11-34J15, complete sequence
          Length = 173317

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 27     ttgttgactaaactaatgaat 47
              |||||||||||||||||||||
Sbjct: 163163 ttgttgactaaactaatgaat 163183
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>gb|AE003828.4| Drosophila melanogaster chromosome 2R, section 22 of 73 of the complete
              sequence
          Length = 257907

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 504    tttattttttgattccccttt 524
              |||||||||||||||||||||
Sbjct: 119751 tttattttttgattccccttt 119731
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>dbj|AP000901.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-686G14, complete
              sequence
          Length = 205903

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 32     gactaaactaatgaatcgcca 52
              |||||||||||||||||||||
Sbjct: 199326 gactaaactaatgaatcgcca 199306
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>dbj|AP002788.3| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-347E10, complete
             sequence
          Length = 174311

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 32    gactaaactaatgaatcgcca 52
             |||||||||||||||||||||
Sbjct: 88870 gactaaactaatgaatcgcca 88850
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>gb|AC140791.4| Gallus gallus BAC clone TAM33-20G4 from chromosome ul, complete sequence
          Length = 219854

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 271    gccaggctcttccctcccatc 291
              |||||||||||||||||||||
Sbjct: 196346 gccaggctcttccctcccatc 196326
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>gb|AC111097.10| Mus musculus chromosome 3, clone RP23-174G7, complete sequence
          Length = 206043

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 125   agtaggccatgctggctggc 144
             ||||||||||||||||||||
Sbjct: 23561 agtaggccatgctggctggc 23580
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>gb|AF525764.1| Aegilops tauschii subsp. strangulata SBE I pseudogene, partial
             sequence; SBE I pseudogene, complete sequence; and starch
             branching enzyme I (SBE I) gene, complete cds
          Length = 25187

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 577   gactctccttcttctttgaa 596
             ||||||||||||||||||||
Sbjct: 18766 gactctccttcttctttgaa 18747
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>gb|AC159228.2| Mus musculus BAC clone RP24-338I14 from chromosome 13, complete
             sequence
          Length = 158726

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 16    gttacaatgtgttgttgact 35
             ||||||||||||||||||||
Sbjct: 23824 gttacaatgtgttgttgact 23843
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>gb|U39855.1| Caenorhabditis elegans cosmid F18G5, complete sequence
          Length = 31776

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 493  gttgcctttgatttattttttgat 516
            |||||||||||||| |||||||||
Sbjct: 5185 gttgcctttgattttttttttgat 5162
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>gb|AC005528.43| Mus musculus strain 129S6/SvEvTac clone rp21-493n6 map 11a2, complete
             sequence
          Length = 199326

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 383   tctggctcttgtcaccccac 402
             ||||||||||||||||||||
Sbjct: 42793 tctggctcttgtcaccccac 42812
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>gb|AC073873.7| Homo sapiens BAC clone RP11-575M4 from 7, complete sequence
          Length = 188992

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 499   tttgatttattttttgattc 518
             ||||||||||||||||||||
Sbjct: 93675 tttgatttattttttgattc 93656
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>gb|AC126030.3| Mus musculus BAC clone RP23-452N11 from chromosome 16, complete sequence
          Length = 187505

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 555    ttccaattcagccaagtctt 574
              ||||||||||||||||||||
Sbjct: 106349 ttccaattcagccaagtctt 106330
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>gb|AC122304.4| Mus musculus BAC clone RP23-283G11 from 18, complete sequence
          Length = 184090

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 474    ctttttctttgtatcctcag 493
              ||||||||||||||||||||
Sbjct: 125534 ctttttctttgtatcctcag 125553
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>gb|AC144343.8| Medicago truncatula clone mth2-12c21, complete sequence
          Length = 130740

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 472   tgctttttctttgtatcctcagtt 495
             |||||||||||||||| |||||||
Sbjct: 66906 tgctttttctttgtatgctcagtt 66883
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>emb|BX927062.11| Zebrafish DNA sequence from clone CH211-227N20 in linkage group 13,
             complete sequence
          Length = 154186

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 469   ctttgctttttctttgtatcctca 492
             ||||||||||||||| ||||||||
Sbjct: 32964 ctttgctttttctttctatcctca 32987
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>emb|AL031291.3|HS796F18 Human DNA sequence from clone RP4-796F18 on chromosome 1p36.11-36.33
             Contains the gene for transitional epithelia response
             protein (TERE1) and a ubiquitin-conjugating enzyme E2
             variant 2 (UBE2V2) pseudogene, complete sequence
          Length = 118968

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 327   tcccccaatgaccacaccaa 346
             ||||||||||||||||||||
Sbjct: 42739 tcccccaatgaccacaccaa 42758
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>emb|AL645845.14| Mouse DNA sequence from clone RP23-338J18 on chromosome 11 Contains the
             Ewsh gene for Ewing sarcoma homolog, a novel gene, gene
             Emu1 and two CpG islands, complete sequence
          Length = 109446

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 383   tctggctcttgtcaccccac 402
             ||||||||||||||||||||
Sbjct: 82121 tctggctcttgtcaccccac 82102
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>gb|AC147271.3| Pan troglodytes BAC clone RP43-121F15 from chromosome 7, complete
              sequence
          Length = 180569

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 499    tttgatttattttttgattc 518
              ||||||||||||||||||||
Sbjct: 179916 tttgatttattttttgattc 179897
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>gb|AF359522.1|AF359522 Vitis vinifera inward rectifying potassium channel (SIRK) gene,
           promoter region and complete cds
          Length = 7891

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 276 gctcttccctcccatcacgg 295
           ||||||||||||||||||||
Sbjct: 659 gctcttccctcccatcacgg 678
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>gb|AC156641.2| Mus musculus BAC clone RP23-204J8 from chromosome 9, complete sequence
          Length = 219981

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 356   catcagcagccaagccaatc 375
             ||||||||||||||||||||
Sbjct: 86222 catcagcagccaagccaatc 86241
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>gb|AE010300.1| Leptospira interrogans serovar lai str. 56601 chromosome I, complete
              sequence
          Length = 4332241

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 408    aaagaaagtgatggaaaatg 427
              ||||||||||||||||||||
Sbjct: 431473 aaagaaagtgatggaaaatg 431492
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>gb|AF250370.1|AF250369S2 Mus musculus phosphofructokinase-1 C isozyme (Pfkc) gene, exon 2
          Length = 5919

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 16   gttacaatgtgttgttgact 35
            ||||||||||||||||||||
Sbjct: 1725 gttacaatgtgttgttgact 1744
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>gb|AC139109.1| Homo sapiens chromosome 5 clone RP11-887F16, complete sequence
          Length = 167832

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 473    gctttttctttgtatcctcagttg 496
              ||||||||| ||||||||||||||
Sbjct: 121157 gctttttctctgtatcctcagttg 121180
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>gb|AC136612.2| Homo sapiens chromosome 16 clone RP11-319D11, complete sequence
          Length = 221622

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 473   gctttttctttgtatcctcagttg 496
             ||||||||| ||||||||||||||
Sbjct: 94923 gctttttctctgtatcctcagttg 94900
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>gb|AC133939.4| Mus musculus BAC clone RP23-402F1 from chromosome 5, complete sequence
          Length = 193121

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 430    ttgataaaaattggtgagaa 449
              ||||||||||||||||||||
Sbjct: 161882 ttgataaaaattggtgagaa 161863
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>emb|BX005065.10| Zebrafish DNA sequence from clone CH211-163B2 in linkage group 8,
            complete sequence
          Length = 175016

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 489  ctcagttgcctttgatttattttttgat 516
            |||| |||||||| ||||||||||||||
Sbjct: 2373 ctcatttgccttttatttattttttgat 2346
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>gb|AC112944.7| Mus musculus chromosome 5, clone RP23-411F8, complete sequence
          Length = 209174

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 430    ttgataaaaattggtgagaa 449
              ||||||||||||||||||||
Sbjct: 109657 ttgataaaaattggtgagaa 109676
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>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence
          Length = 3131724

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 211     ccgaacaacaggaacagcac 230
               ||||||||||||||||||||
Sbjct: 2867741 ccgaacaacaggaacagcac 2867760
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>gb|AC155928.2| Mus musculus BAC clone RP24-70N20 from 9, complete sequence
          Length = 239304

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 468    cctttgctttttctttgtat 487
              ||||||||||||||||||||
Sbjct: 113646 cctttgctttttctttgtat 113665
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>tpe|BN000728.1| TPA: TPA_exp: Canis familiaris col6a3 gene for collagen, type VI, alpha 3
              and mlph gene for melanophilin
          Length = 212696

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 237    cgacaattcaaccatcttct 256
              ||||||||||||||||||||
Sbjct: 177011 cgacaattcaaccatcttct 176992
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>gb|AC027354.3| Homo sapiens chromosome 16 clone RP11-179H7, complete sequence
          Length = 182046

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 473    gctttttctttgtatcctcagttg 496
              ||||||||| ||||||||||||||
Sbjct: 121156 gctttttctctgtatcctcagttg 121179
to top
>gb|AE016823.1| Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130,
              chromosome I, complete sequence
          Length = 4277185

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 408    aaagaaagtgatggaaaatg 427
              ||||||||||||||||||||
Sbjct: 429260 aaagaaagtgatggaaaatg 429279
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>emb|BX284693.6| Zebrafish DNA sequence from clone DKEY-179M13 in linkage group 2,
             complete sequence
          Length = 84370

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 408   aaagaaagtgatggaaaatg 427
             ||||||||||||||||||||
Sbjct: 67004 aaagaaagtgatggaaaatg 66985
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>emb|AJ920047.1| Canis familiaris melanophilin gene locus, breed Doberman
          Length = 197532

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 237    cgacaattcaaccatcttct 256
              ||||||||||||||||||||
Sbjct: 175752 cgacaattcaaccatcttct 175733
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>gb|AC147562.5| Mus musculus BAC clone RP23-239A13 from 3, complete sequence
          Length = 167633

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 567   caagtcttctgactctcctt 586
             ||||||||||||||||||||
Sbjct: 46686 caagtcttctgactctcctt 46667
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>gb|AC173481.1| Mus musculus BAC clone RP23-411A24 from chromosome 13, complete
             sequence
          Length = 203948

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 16    gttacaatgtgttgttgact 35
             ||||||||||||||||||||
Sbjct: 92140 gttacaatgtgttgttgact 92121
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>gb|AC158363.2| Mus musculus BAC clone RP23-214J3 from chromosome 15, complete sequence
          Length = 228138

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 273    caggctcttccctcccatca 292
              ||||||||||||||||||||
Sbjct: 109045 caggctcttccctcccatca 109026


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,516,017
Number of Sequences: 3902068
Number of extensions: 6516017
Number of successful extensions: 140689
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 140416
Number of HSP's gapped (non-prelim): 273
length of query: 597
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 574
effective length of database: 17,143,297,704
effective search space: 9840252882096
effective search space used: 9840252882096
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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