Clone Information

BLAST Search Result

Clone Name	rbags12a03
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	dbj\|AK060515.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	167	5e-38
2	gb\|AF457951.1\| Zea mays clone ceb5.pk0078.g9, mRNA sequence	121	3e-24
3	gb\|BT016639.1\| Zea mays clone Contig472 mRNA sequence	115	2e-22
4	gb\|AY109499.1\| Zea mays CL2801_1 mRNA sequence	96	2e-16
5	dbj\|AP008212.1\| Oryza sativa (japonica cultivar-group) genomic D...	72	2e-09
6	dbj\|AP003510.3\| Oryza sativa (japonica cultivar-group) genomic D...	72	2e-09
7	dbj\|AK120916.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	72	2e-09
8	dbj\|AK071888.1\| Oryza sativa (japonica cultivar-group) cDNA clon...	72	2e-09
9	ref\|XM_472649.1\| Oryza sativa (japonica cultivar-group), predic...	70	9e-09
10	gb\|M60410.1\|BLYKASI Hordeum vulgare beta-ketoacyl-ACP synthase I...	68	4e-08
11	gb\|AF263992.1\|AF263992 Coriandrum sativum beta-ketoacyl-ACP synt...	66	1e-07
12	dbj\|AP008210.1\| Oryza sativa (japonica cultivar-group) genomic D...	64	6e-07
13	emb\|AL731593.2\|OSJN00235 Oryza sativa genomic DNA, chromosome 4,...	64	6e-07
14	gb\|M95172.1\|BLYBKASI Hordeum vulgare chloroplast beta-ketoacyl-A...	56	1e-04
15	gb\|AF026148.1\|AF026148 Perilla frutescens beta-ketoacyl-ACP synt...	50	0.008
16	gb\|AF243183.1\|AF243183 Glycine max beta-ketoacyl-ACP synthetase ...	46	0.13
17	gb\|AF243182.1\|AF243182 Glycine max beta-ketoacyl-ACP synthetase ...	46	0.13
18	gb\|L13242.1\|RCCBKACPSB Castor bean chloroplast beta-ketoacyl-ACP...	46	0.13
19	gb\|AC146651.10\| Medicago truncatula clone mth2-113d3, complete s...	42	2.1
20	gb\|AE014133.1\| Streptococcus mutans UA159, complete genome	42	2.1
21	gb\|AC136225.2\| Oryza sativa (japonica cultivar-group) chromosome...	40	8.2
22	gb\|AF078787.2\| Caenorhabditis elegans cosmid T17A3, complete seq...	40	8.2
23	emb\|CT025840.2\| Medicago truncatula chromosome 5 clone mth4-39c2...	40	8.2
24	emb\|CT025843.1\| Medicago truncatula chromosome 5 clone mth2-17e2...	40	8.2
25	gb\|AC129592.5\| Mus musculus BAC clone RP24-86A6 from chromosome ...	40	8.2
26	emb\|CR954197.2\| Medicago truncatula chromosome 5 clone mte1-80m7...	40	8.2
27	gb\|AC144459.8\| Medicago truncatula clone mth2-23o13, complete se...	40	8.2
28	gb\|AC135604.29\| Medicago truncatula clone mth2-32p10, complete s...	40	8.2
29	gb\|AC144591.10\| Medicago truncatula clone mth2-5f17, complete se...	40	8.2
30	gb\|AC152158.10\| Medicago truncatula clone mth2-139g10, complete ...	40	8.2
31	gb\|AC145372.7\| Medicago truncatula clone mth2-5f4, complete sequ...	40	8.2
32	gb\|AC146329.19\| Medicago truncatula clone mth2-5i21, complete se...	40	8.2
33	gb\|AC137081.30\| Medicago truncatula clone mth2-10j6, complete se...	40	8.2
34	gb\|AC146683.11\| Medicago truncatula clone mth2-179n10, complete ...	40	8.2
35	gb\|AC146721.7\| Medicago truncatula clone mth2-145n10, complete s...	40	8.2
36	gb\|AC148486.17\| Medicago truncatula clone mth2-56d23, complete s...	40	8.2
37	gb\|AC146793.7\| Medicago truncatula clone mth2-10p9, complete seq...	40	8.2
38	gb\|AC151743.27\| Medicago truncatula clone mth2-25e15, complete s...	40	8.2
39	gb\|AC127021.25\| Medicago truncatula clone mth2-5e5, complete seq...	40	8.2
40	gb\|AC137827.20\| Medicago truncatula clone mth2-20g23, complete s...	40	8.2
41	gb\|AC147006.18\| Medicago truncatula clone mth2-62m1, complete se...	40	8.2
42	gb\|AC146856.8\| Medicago truncatula clone mth2-16l23, complete se...	40	8.2
43	gb\|AC146589.31\| Medicago truncatula clone mth2-145o21, complete ...	40	8.2
44	gb\|AC130802.36\| Medicago truncatula clone mth2-28b21, complete s...	40	8.2
45	gb\|AC119416.15\| Medicago truncatula clone mth2-31m16, complete s...	40	8.2
46	gb\|AC149134.2\| Medicago truncatula, complete sequence	40	8.2
47	gb\|AF263097.1\|AF263097 Misgurnus fossilis cytochrome b gene, par...	40	8.2
48	dbj\|AP008213.1\| Oryza sativa (japonica cultivar-group) genomic D...	40	8.2
49	dbj\|AP008211.1\| Oryza sativa (japonica cultivar-group) genomic D...	40	8.2
50	dbj\|AP005103.5\| Oryza sativa (japonica cultivar-group) genomic D...	40	8.2
51	gb\|AC155891.2\| Medicago truncatula chromosome 2 BAC clone mth2-4...	40	8.2
52	emb\|CT573421.5\| M.truncatula DNA sequence from clone MTH2-27B10 ...	40	8.2
53	emb\|X14915.1\|RNAPH R.norvegicus gene for acyl-peptide hydrolase	40	8.2
54	emb\|CT573501.1\| Medicago truncatula chromosome 5 clone mth2-60o2...	40	8.2
55	gb\|AC140358.2\| Mus musculus BAC clone RP24-234L7 from 3, complet...	40	8.2
56	emb\|CR956368.6\| M.truncatula DNA sequence from clone MTH2-64D19 ...	40	8.2

>dbj|AK060515.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-020-A01, full
            insert sequence
          Length = 1852

 Score =  167 bits (84), Expect = 5e-38
 Identities = 200/236 (84%), Gaps = 2/236 (0%)
 Strand = Plus / Minus

                                                                        
Query: 364  aaggcttgaatggggcgaatacaaccaccgagttgtgtcctccaaatccaaaggaattcg 423
            ||||||| ||||| || ||||| || || || |||||||| |||||||||||||||||||
Sbjct: 1482 aaggcttaaatggtgcaaatactacaactgaattgtgtccaccaaatccaaaggaattcg 1423

                                                                        
Query: 424  agataccaacattgatttcatgttcggcctttacgttgggtaccgtgtcaaattcaaccg 483
            ||||||||||||| | ||||||||     ||||| || |||||||||||||||||||| |
Sbjct: 1422 agataccaacattcacttcatgttgcttttttacattaggtaccgtgtcaaattcaacag 1363

                                                                        
Query: 484  caggctcccggtcaaactggtttatgctcggatgcaccaatccagtgttttatcgcttta 543
            | |||||| ||| ||||||||||||||| ||||| ||| ||||||||  |||| ||||||
Sbjct: 1362 ctggctccgggttaaactggtttatgcttggatggacccatccagtg-gttatagcttta 1304

                                                                    
Query: 544  atagtagcaatggctttccaaaccacctgctgcacctaggcaatgacctatcatgg 599
            | ||| |||||||| |||||| ||||| || ||||| |||||||| || |||||||
Sbjct: 1303 acagttgcaatggc-ttccaagccaccagccgcaccaaggcaatgtccaatcatgg 1249

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>gb|AF457951.1| Zea mays clone ceb5.pk0078.g9, mRNA sequence
          Length = 527

 Score =  121 bits (61), Expect = 3e-24
 Identities = 170/204 (83%), Gaps = 2/204 (0%)
 Strand = Plus / Minus

                                                                       
Query: 396 ttgtgtcctccaaatccaaaggaattcgagataccaacattgatttcatgttcggccttt 455
           ||||| |||||||||||||| ||||| ||||| ||||| || | |||||| |     |||
Sbjct: 479 ttgtgacctccaaatccaaaagaatttgagatgccaacgttcacttcatgctgctntttt 420

                                                                       
Query: 456 acgttgggtaccgtgtcaaattcaaccgcaggctcccggtcaaactggtttatgctcgga 515
           || || ||||| ||||| |||||||||||   |||  ||| ||| ||||||||||| |||
Sbjct: 419 acattaggtactgtgtcgaattcaaccgcttcctctgggttaaattggtttatgcttgga 360

                                                                       
Query: 516 tgcaccaatccagtgttttatcgctttaatagtagcaatggctttccaaaccacctgctg 575
           |||||| |||||||  || |||||||| | |||||||||||||| |||||||||||||||
Sbjct: 359 tgcacccatccagtagtt-atcgctttgacagtagcaatggctt-ccaaaccacctgctg 302

                                   
Query: 576 cacctaggcaatgacctatcatgg 599
           |||| |||||||| ||||||||||
Sbjct: 301 caccaaggcaatgtcctatcatgg 278

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>gb|BT016639.1| Zea mays clone Contig472 mRNA sequence
          Length = 1841

 Score =  115 bits (58), Expect = 2e-22
 Identities = 192/234 (82%), Gaps = 2/234 (0%)
 Strand = Plus / Minus

                                                                        
Query: 366  ggcttgaatggggcgaatacaaccaccgagttgtgtcctccaaatccaaaggaattcgag 425
            ||||| ||||| || ||||| || || || ||||| |||||||||||||| ||||| |||
Sbjct: 1495 ggcttaaatggcgcaaatactacgacagaattgtgacctccaaatccaaaagaatttgag 1436

                                                                        
Query: 426  ataccaacattgatttcatgttcggcctttacgttgggtaccgtgtcaaattcaaccgca 485
            || ||||| || | |||||| |     ||||| || ||||| ||||| ||||||||||| 
Sbjct: 1435 atgccaacgttcacttcatgctgcttttttacattaggtactgtgtcgaattcaaccgct 1376

                                                                        
Query: 486  ggctcccggtcaaactggtttatgctcggatgcaccaatccagtgttttatcgctttaat 545
              |||  ||| ||| ||||||||||| ||||||||| |||||||  || |||||||| | 
Sbjct: 1375 tcctctgggttaaattggtttatgcttggatgcacccatccagtagtt-atcgctttgac 1317

                                                                  
Query: 546  agtagcaatggctttccaaaccacctgctgcacctaggcaatgacctatcatgg 599
            |||||||||||||| ||||||||||||||||||| ||||| || ||||||||||
Sbjct: 1316 agtagcaatggctt-ccaaaccacctgctgcaccaaggcagtgtcctatcatgg 1264

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>gb|AY109499.1| Zea mays CL2801_1 mRNA sequence
          Length = 1844

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 188/234 (80%), Gaps = 2/234 (0%)
 Strand = Plus / Plus

                                                                       
Query: 366 ggcttgaatggggcgaatacaaccaccgagttgtgtcctccaaatccaaaggaattcgag 425
           ||||| ||||| || ||||| || || || ||||| |||||||||||||| ||||| |||
Sbjct: 433 ggcttaaatggcgcaaatactacgacagaattgtgacctccaaatccaaaagaatttgag 492

                                                                       
Query: 426 ataccaacattgatttcatgttcggcctttacgttgggtaccgtgtcaaattcaaccgca 485
           || ||||| || | |||||| |        || || ||||| ||||| ||||||||||| 
Sbjct: 493 atgccaacgttcacttcatgctgcnnnnnnacattaggtactgtgtcgaattcaaccgct 552

                                                                       
Query: 486 ggctcccggtcaaactggtttatgctcggatgcaccaatccagtgttttatcgctttaat 545
             |||  ||| ||| |||||||| || ||||||||| |||||||  || |||||||| | 
Sbjct: 553 tcctctgggttaaattggtttatacttggatgcacccatccagtagtt-atcgctttgac 611

                                                                 
Query: 546 agtagcaatggctttccaaaccacctgctgcacctaggcaatgacctatcatgg 599
           |||||||||||||| ||||||||||||||||||| ||||| || ||||||||||
Sbjct: 612 agtagcaatggctt-ccaaaccacctgctgcaccaaggcagtgtcctatcatgg 664

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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 89/104 (85%), Gaps = 2/104 (1%)
 Strand = Plus / Plus

                                                                           
Query: 496     caaactggtttatgctcggatgcaccaatccagtgttttatcgctttaatagtagcaatg 555
               |||||||||||||||| ||||| ||| ||||||||  |||| ||||||| ||| ||||||
Sbjct: 4908820 caaactggtttatgcttggatggacccatccagtg-gttatagctttaacagttgcaatg 4908878

                                                           
Query: 556     gctttccaaaccacctgctgcacctaggcaatgacctatcatgg 599
               || |||||| ||||| || ||||| |||||||| || |||||||
Sbjct: 4908879 gc-ttccaagccaccagccgcaccaaggcaatgtccaatcatgg 4908921



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 59/67 (88%)
 Strand = Plus / Plus

                                                                           
Query: 364     aaggcttgaatggggcgaatacaaccaccgagttgtgtcctccaaatccaaaggaattcg 423
               ||||||| ||||| || ||||| || || || |||||||| |||||||||||||||||||
Sbjct: 4908498 aaggcttaaatggtgcaaatactacaactgaattgtgtccaccaaatccaaaggaattcg 4908557

                      
Query: 424     agatacc 430
               |||||||
Sbjct: 4908558 agatacc 4908564



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                      
Query: 453     tttacgttgggtaccgtgtcaaattcaaccgcaggctcc 491
               ||||| || |||||||||||||||||||| || ||||||
Sbjct: 4908669 tttacattaggtaccgtgtcaaattcaacagctggctcc 4908707

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>dbj|AP003510.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0528E04
          Length = 170701

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 89/104 (85%), Gaps = 2/104 (1%)
 Strand = Plus / Plus

                                                                         
Query: 496   caaactggtttatgctcggatgcaccaatccagtgttttatcgctttaatagtagcaatg 555
             |||||||||||||||| ||||| ||| ||||||||  |||| ||||||| ||| ||||||
Sbjct: 96303 caaactggtttatgcttggatggacccatccagtg-gttatagctttaacagttgcaatg 96361

                                                         
Query: 556   gctttccaaaccacctgctgcacctaggcaatgacctatcatgg 599
             || |||||| ||||| || ||||| |||||||| || |||||||
Sbjct: 96362 gc-ttccaagccaccagccgcaccaaggcaatgtccaatcatgg 96404



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 59/67 (88%)
 Strand = Plus / Plus

                                                                         
Query: 364   aaggcttgaatggggcgaatacaaccaccgagttgtgtcctccaaatccaaaggaattcg 423
             ||||||| ||||| || ||||| || || || |||||||| |||||||||||||||||||
Sbjct: 95981 aaggcttaaatggtgcaaatactacaactgaattgtgtccaccaaatccaaaggaattcg 96040

                    
Query: 424   agatacc 430
             |||||||
Sbjct: 96041 agatacc 96047



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                    
Query: 453   tttacgttgggtaccgtgtcaaattcaaccgcaggctcc 491
             ||||| || |||||||||||||||||||| || ||||||
Sbjct: 96152 tttacattaggtaccgtgtcaaattcaacagctggctcc 96190

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>dbj|AK120916.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023034I15, full
            insert sequence
          Length = 1909

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 66/76 (86%)
 Strand = Plus / Minus

                                                                        
Query: 361  atcaaggcttgaatggggcgaatacaaccaccgagttgtgtcctccaaatccaaaggaat 420
            |||| ||||||||||| || ||||| ||||| || ||||| |||||||||||||| ||||
Sbjct: 1628 atcatggcttgaatggcgcaaatactaccactgaattgtgacctccaaatccaaatgaat 1569

                            
Query: 421  tcgagataccaacatt 436
            | |||||| |||||||
Sbjct: 1568 tagagatagcaacatt 1553



 Score = 40.1 bits (20), Expect = 8.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 566  ccacctgctgcacctaggcaatgacctatcat 597
            ||||| || |||||||||||||| ||||||||
Sbjct: 1425 ccaccagcggcacctaggcaatggcctatcat 1394

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>dbj|AK071888.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013046E01, full
            insert sequence
          Length = 1749

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 66/76 (86%)
 Strand = Plus / Minus

                                                                        
Query: 361  atcaaggcttgaatggggcgaatacaaccaccgagttgtgtcctccaaatccaaaggaat 420
            |||| ||||||||||| || ||||| ||||| || ||||| |||||||||||||| ||||
Sbjct: 1517 atcatggcttgaatggcgcaaatactaccactgaattgtgacctccaaatccaaatgaat 1458

                            
Query: 421  tcgagataccaacatt 436
            | |||||| |||||||
Sbjct: 1457 tagagatagcaacatt 1442



 Score = 40.1 bits (20), Expect = 8.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 566  ccacctgctgcacctaggcaatgacctatcat 597
            ||||| || |||||||||||||| ||||||||
Sbjct: 1314 ccaccagcggcacctaggcaatggcctatcat 1283

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>ref|XM_472649.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1329

 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 62/71 (87%)
 Strand = Plus / Minus

                                                                        
Query: 366  ggcttgaatggggcgaatacaaccaccgagttgtgtcctccaaatccaaaggaattcgag 425
            ||||||||||| || ||||| ||||| || ||||| |||||||||||||| ||||| |||
Sbjct: 1325 ggcttgaatggcgcaaatactaccactgaattgtgacctccaaatccaaatgaattagag 1266

                       
Query: 426  ataccaacatt 436
            ||| |||||||
Sbjct: 1265 atagcaacatt 1255



 Score = 40.1 bits (20), Expect = 8.2
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 566  ccacctgctgcacctaggcaatgacctatcat 597
            ||||| || |||||||||||||| ||||||||
Sbjct: 1127 ccaccagcggcacctaggcaatggcctatcat 1096

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>gb|M60410.1|BLYKASI Hordeum vulgare beta-ketoacyl-ACP synthase I (Kas12) mRNA, complete
            cds
          Length = 1805

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 133/166 (80%)
 Strand = Plus / Minus

                                                                        
Query: 361  atcaaggcttgaatggggcgaatacaaccaccgagttgtgtcctccaaatccaaaggaat 420
            |||| ||||||||||| |||||||| ||||| || ||||| ||||||||||| || || |
Sbjct: 1554 atcacggcttgaatggcgcgaatactaccacggaattgtgccctccaaatccgaatgagt 1495

                                                                        
Query: 421  tcgagataccaacattgatttcatgttcggcctttacgttgggtaccgtgtcaaattcaa 480
            | || ||||||||||| | |||||| |    |||| |||| | ||| || ||||| ||||
Sbjct: 1494 tagaaataccaacattcacttcatgctgcttcttttcgttagctactgtatcaaaatcaa 1435

                                                          
Query: 481  ccgcaggctcccggtcaaactggtttatgctcggatgcaccaatcc 526
            |  |||||||| ||| ||| ||||| ||| | ||||||||| ||||
Sbjct: 1434 cttcaggctccgggttaaattggttaatggtaggatgcacccatcc 1389

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>gb|AF263992.1|AF263992 Coriandrum sativum beta-ketoacyl-ACP synthetase I gene, complete cds;
            nuclear gene for a plastid product
          Length = 1727

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 57/65 (87%)
 Strand = Plus / Minus

                                                                        
Query: 381  aatacaaccaccgagttgtgtcctccaaatccaaaggaattcgagataccaacattgatt 440
            ||||| ||||| ||||||||||| ||||||||||| ||||| ||||| |||||||| | |
Sbjct: 1480 aataccaccactgagttgtgtccaccaaatccaaatgaatttgagatgccaacattcact 1421

                 
Query: 441  tcatg 445
            |||||
Sbjct: 1420 tcatg 1416

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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 59/68 (86%)
 Strand = Plus / Plus

                                                                            
Query: 361      atcaaggcttgaatggggcgaatacaaccaccgagttgtgtcctccaaatccaaaggaat 420
                |||| ||||||||||| || ||||| ||||| || ||||| |||||||||||||| ||||
Sbjct: 22192868 atcatggcttgaatggcgcaaatactaccactgaattgtgacctccaaatccaaatgaat 22192927

                        
Query: 421      tcgagata 428
                | ||||||
Sbjct: 22192928 tagagata 22192935



 Score = 40.1 bits (20), Expect = 8.2
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                                
Query: 566      ccacctgctgcacctaggcaatgacctatcat 597
                ||||| || |||||||||||||| ||||||||
Sbjct: 22193551 ccaccagcggcacctaggcaatggcctatcat 22193582

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>emb|AL731593.2|OSJN00235 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0027P08,
             complete sequence
          Length = 118959

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 59/68 (86%)
 Strand = Plus / Plus

                                                                         
Query: 361   atcaaggcttgaatggggcgaatacaaccaccgagttgtgtcctccaaatccaaaggaat 420
             |||| ||||||||||| || ||||| ||||| || ||||| |||||||||||||| ||||
Sbjct: 62729 atcatggcttgaatggcgcaaatactaccactgaattgtgacctccaaatccaaatgaat 62788

                     
Query: 421   tcgagata 428
             | ||||||
Sbjct: 62789 tagagata 62796



 Score = 40.1 bits (20), Expect = 8.2
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 566   ccacctgctgcacctaggcaatgacctatcat 597
             ||||| || |||||||||||||| ||||||||
Sbjct: 63412 ccaccagcggcacctaggcaatggcctatcat 63443

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>gb|M95172.1|BLYBKASI Hordeum vulgare chloroplast beta-ketoacyl-ACP sythase I isozyme
            (Kas12) gene, exons 1 through 7 and complete cds
          Length = 6319

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Minus

                                                                
Query: 361  atcaaggcttgaatggggcgaatacaaccaccgagttgtgtcctccaaatcc 412
            |||| ||||||||||| |||||||| ||||| || ||||| |||||||||||
Sbjct: 5861 atcacggcttgaatggcgcgaatactaccacggaattgtgccctccaaatcc 5810

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>gb|AF026148.1|AF026148 Perilla frutescens beta-ketoacyl-ACP synthase I (KAS I) mRNA,
            complete cds
          Length = 1841

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                 
Query: 393  gagttgtgtcctccaaatccaaaggaattcgagataccaacattgatttcatg 445
            |||||||| || || |||||||||||||| |||||  ||||||||| ||||||
Sbjct: 1487 gagttgtggcccccgaatccaaaggaatttgagattgcaacattgacttcatg 1435

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>gb|AF243183.1|AF243183 Glycine max beta-ketoacyl-ACP synthetase I-2 mRNA, complete cds;
            nuclear gene for proplastid product
          Length = 1596

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                       
Query: 387  accaccgagttgtgtcctccaaatccaaaggaattcgagataccaacattgatttcatg 445
            ||||| ||||||||||| || |||||||| ||||| || ||  |||| |||||||||||
Sbjct: 1455 accacagagttgtgtccaccgaatccaaatgaatttgaaatggcaacgttgatttcatg 1397

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>gb|AF243182.1|AF243182 Glycine max beta-ketoacyl-ACP synthetase I mRNA, complete cds;
            nuclear gene for proplastid product
          Length = 1578

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                       
Query: 387  accaccgagttgtgtcctccaaatccaaaggaattcgagataccaacattgatttcatg 445
            ||||| ||||||||||| || |||||||| ||||| || ||  |||| |||||||||||
Sbjct: 1477 accacagagttgtgtccaccgaatccaaatgaatttgaaatggcaacgttgatttcatg 1419

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>gb|L13242.1|RCCBKACPSB Castor bean chloroplast beta-ketoacyl-ACP synthase (50 kDa synthase)
            mRNA, complete cds
          Length = 1835

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 387  accaccgagttgtgtcctccaaatccaaaggaatt 421
            ||||| ||||||||||| || ||||||||||||||
Sbjct: 1441 accacagagttgtgtccaccgaatccaaaggaatt 1407

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>gb|AC146651.10| Medicago truncatula clone mth2-113d3, complete sequence
          Length = 157296

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 393    gagttgtgtcctccaaatccaaaggaatt 421
              ||||||||||| ||||||||||| |||||
Sbjct: 132642 gagttgtgtccaccaaatccaaatgaatt 132670

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>gb|AE014133.1| Streptococcus mutans UA159, complete genome
          Length = 2030921

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                                
Query: 396     ttgtgtcctccaaatccaaaggaattcgagata 428
               |||||||| ||||||||||||| ||| ||||||
Sbjct: 1645336 ttgtgtccgccaaatccaaaggtatttgagata 1645368

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>gb|AC136225.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0022L07, complete sequence
          Length = 142134

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 111   ttctacatgataaattacac 130
             ||||||||||||||||||||
Sbjct: 70460 ttctacatgataaattacac 70441

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>gb|AF078787.2| Caenorhabditis elegans cosmid T17A3, complete sequence
          Length = 29002

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 117  atgataaattacacgaaaacaagt 140
            |||||||||||| |||||||||||
Sbjct: 5531 atgataaattactcgaaaacaagt 5508

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>emb|CT025840.2| Medicago truncatula chromosome 5 clone mth4-39c23, COMPLETE SEQUENCE
          Length = 243542

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 528   gtgttttatcgctttaatag 547
             ||||||||||||||||||||
Sbjct: 79377 gtgttttatcgctttaatag 79396

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>emb|CT025843.1| Medicago truncatula chromosome 5 clone mth2-17e22, COMPLETE SEQUENCE
          Length = 116514

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 528   gtgttttatcgctttaatag 547
             ||||||||||||||||||||
Sbjct: 46542 gtgttttatcgctttaatag 46523

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>gb|AC129592.5| Mus musculus BAC clone RP24-86A6 from chromosome 3, complete sequence
          Length = 186218

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 239   tgtaatgttgctggcagtca 258
             ||||||||||||||||||||
Sbjct: 12587 tgtaatgttgctggcagtca 12568

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>emb|CR954197.2| Medicago truncatula chromosome 5 clone mte1-80m7, COMPLETE SEQUENCE
          Length = 138067

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 528    gtgttttatcgctttaatag 547
              ||||||||||||||||||||
Sbjct: 128675 gtgttttatcgctttaatag 128694

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>gb|AC144459.8| Medicago truncatula clone mth2-23o13, complete sequence
          Length = 114098

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 528   gtgttttatcgctttaatag 547
             ||||||||||||||||||||
Sbjct: 21027 gtgttttatcgctttaatag 21046

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>gb|AC135604.29| Medicago truncatula clone mth2-32p10, complete sequence
          Length = 136735

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 528   gtgttttatcgctttaatag 547
             ||||||||||||||||||||
Sbjct: 68188 gtgttttatcgctttaatag 68169

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>gb|AC144591.10| Medicago truncatula clone mth2-5f17, complete sequence
          Length = 128352

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 528    gtgttttatcgctttaatag 547
              ||||||||||||||||||||
Sbjct: 114642 gtgttttatcgctttaatag 114623

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>gb|AC152158.10| Medicago truncatula clone mth2-139g10, complete sequence
          Length = 140874

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 528   gtgttttatcgctttaatag 547
             ||||||||||||||||||||
Sbjct: 90277 gtgttttatcgctttaatag 90258

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>gb|AC145372.7| Medicago truncatula clone mth2-5f4, complete sequence
          Length = 94647

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 528   gtgttttatcgctttaatag 547
             ||||||||||||||||||||
Sbjct: 89870 gtgttttatcgctttaatag 89851

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>gb|AC146329.19| Medicago truncatula clone mth2-5i21, complete sequence
          Length = 142834

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 528    gtgttttatcgctttaatag 547
              ||||||||||||||||||||
Sbjct: 132022 gtgttttatcgctttaatag 132041

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>gb|AC137081.30| Medicago truncatula clone mth2-10j6, complete sequence
          Length = 132253

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 528    gtgttttatcgctttaatag 547
              ||||||||||||||||||||
Sbjct: 117522 gtgttttatcgctttaatag 117541

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>gb|AC146683.11| Medicago truncatula clone mth2-179n10, complete sequence
          Length = 131133

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 528    gtgttttatcgctttaatag 547
              ||||||||||||||||||||
Sbjct: 100879 gtgttttatcgctttaatag 100898

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>gb|AC146721.7| Medicago truncatula clone mth2-145n10, complete sequence
          Length = 133097

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 528   gtgttttatcgctttaatag 547
             ||||||||||||||||||||
Sbjct: 30464 gtgttttatcgctttaatag 30483

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>gb|AC148486.17| Medicago truncatula clone mth2-56d23, complete sequence
          Length = 121459

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 528   gtgttttatcgctttaatag 547
             ||||||||||||||||||||
Sbjct: 25709 gtgttttatcgctttaatag 25690

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>gb|AC146793.7| Medicago truncatula clone mth2-10p9, complete sequence
          Length = 115521

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 528    gtgttttatcgctttaatag 547
              ||||||||||||||||||||
Sbjct: 108228 gtgttttatcgctttaatag 108247

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>gb|AC151743.27| Medicago truncatula clone mth2-25e15, complete sequence
          Length = 105045

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 528   gtgttttatcgctttaatag 547
             ||||||||||||||||||||
Sbjct: 91707 gtgttttatcgctttaatag 91726

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>gb|AC127021.25| Medicago truncatula clone mth2-5e5, complete sequence
          Length = 139116

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 528   gtgttttatcgctttaatag 547
             ||||||||||||||||||||
Sbjct: 18055 gtgttttatcgctttaatag 18074

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>gb|AC137827.20| Medicago truncatula clone mth2-20g23, complete sequence
          Length = 105959

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 528   gtgttttatcgctttaatag 547
             ||||||||||||||||||||
Sbjct: 55927 gtgttttatcgctttaatag 55908

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>gb|AC147006.18| Medicago truncatula clone mth2-62m1, complete sequence
          Length = 126833

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 528   gtgttttatcgctttaatag 547
             ||||||||||||||||||||
Sbjct: 28917 gtgttttatcgctttaatag 28898

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>gb|AC146856.8| Medicago truncatula clone mth2-16l23, complete sequence
          Length = 145382

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 528   gtgttttatcgctttaatag 547
             ||||||||||||||||||||
Sbjct: 79759 gtgttttatcgctttaatag 79740

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>gb|AC146589.31| Medicago truncatula clone mth2-145o21, complete sequence
          Length = 125457

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 528   gtgttttatcgctttaatag 547
             ||||||||||||||||||||
Sbjct: 69936 gtgttttatcgctttaatag 69917

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>gb|AC130802.36| Medicago truncatula clone mth2-28b21, complete sequence
          Length = 123626

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 528   gtgttttatcgctttaatag 547
             ||||||||||||||||||||
Sbjct: 14397 gtgttttatcgctttaatag 14378

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>gb|AC119416.15| Medicago truncatula clone mth2-31m16, complete sequence
          Length = 120889

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 528   gtgttttatcgctttaatag 547
             ||||||||||||||||||||
Sbjct: 74241 gtgttttatcgctttaatag 74260

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>gb|AC149134.2| Medicago truncatula, complete sequence
          Length = 133336

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 528    gtgttttatcgctttaatag 547
              ||||||||||||||||||||
Sbjct: 132030 gtgttttatcgctttaatag 132011

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>gb|AF263097.1|AF263097 Misgurnus fossilis cytochrome b gene, partial cds; mitochondrial
           gene for mitochondrial product
          Length = 1140

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 136 caagtagaacaactgcaaat 155
           ||||||||||||||||||||
Sbjct: 712 caagtagaacaactgcaaat 693

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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 207      aaaatgcaatggatcttgga 226
                ||||||||||||||||||||
Sbjct: 19931928 aaaatgcaatggatcttgga 19931947

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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 111      ttctacatgataaattacac 130
                ||||||||||||||||||||
Sbjct: 14211127 ttctacatgataaattacac 14211108

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>dbj|AP005103.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0036M16
          Length = 158880

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 207   aaaatgcaatggatcttgga 226
             ||||||||||||||||||||
Sbjct: 96578 aaaatgcaatggatcttgga 96597

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>gb|AC155891.2| Medicago truncatula chromosome 2 BAC clone mth2-4g10, complete sequence
          Length = 148303

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 528    gtgttttatcgctttaatag 547
              ||||||||||||||||||||
Sbjct: 143139 gtgttttatcgctttaatag 143120

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>emb|CT573421.5| M.truncatula DNA sequence from clone MTH2-27B10 on chromosome 3,
             complete sequence
          Length = 123669

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 528   gtgttttatcgctttaatag 547
             ||||||||||||||||||||
Sbjct: 24045 gtgttttatcgctttaatag 24064

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>emb|X14915.1|RNAPH R.norvegicus gene for acyl-peptide hydrolase
          Length = 13206

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 55    acagctccttgccttccaat 74
             ||||||||||||||||||||
Sbjct: 11823 acagctccttgccttccaat 11842

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>emb|CT573501.1| Medicago truncatula chromosome 5 clone mth2-60o20, COMPLETE SEQUENCE
          Length = 114271

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 528  gtgttttatcgctttaatag 547
            ||||||||||||||||||||
Sbjct: 3327 gtgttttatcgctttaatag 3308

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>gb|AC140358.2| Mus musculus BAC clone RP24-234L7 from 3, complete sequence
          Length = 160295

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 239   tgtaatgttgctggcagtca 258
             ||||||||||||||||||||
Sbjct: 65275 tgtaatgttgctggcagtca 65256

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>emb|CR956368.6| M.truncatula DNA sequence from clone MTH2-64D19 on chromosome 3,
             complete sequence
          Length = 139040

 Score = 40.1 bits (20), Expect = 8.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 528   gtgttttatcgctttaatag 547
             ||||||||||||||||||||
Sbjct: 79560 gtgttttatcgctttaatag 79579


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,264,125
Number of Sequences: 3902068
Number of extensions: 4264125
Number of successful extensions: 128735
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 128546
Number of HSP's gapped (non-prelim): 179
length of query: 599
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 576
effective length of database: 17,143,297,704
effective search space: 9874539477504
effective search space used: 9874539477504
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result