ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags11k15
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_472371.1| Oryza sativa (japonica cultivar-group), predic... 212 1e-51
2dbj|AK069118.1| Oryza sativa (japonica cultivar-group) cDNA clon... 212 1e-51
3dbj|AK061185.1| Oryza sativa (japonica cultivar-group) cDNA clon... 212 1e-51
4emb|X77569.1|ZMCNXRNA Z.mays CNX mRNA 127 5e-26
5gb|AY112482.1| Zea mays CL2224_1 mRNA sequence 109 1e-20
6emb|AL606610.3|OSJN00045 Oryza sativa genomic DNA, chromosome 4,... 90 1e-14
7dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 90 1e-14
8ref|NM_120816.2| Arabidopsis thaliana calcium ion binding AT5G07... 44 0.57
9gb|AC160118.2| Mus musculus BAC clone RP23-440L7 from chromosome... 44 0.57
10gb|AC114674.10| Mus musculus chromosome 9, clone RP24-209N21, co... 44 0.57
11gb|AC140235.3| Mus musculus BAC clone RP24-272D15 from chromosom... 44 0.57
12gb|AC121995.2| Mus musculus BAC clone RP24-310M4 from 7, complet... 44 0.57
13gb|BT010385.1| Arabidopsis thaliana At5g07340 mRNA, complete cds 44 0.57
14ref|XM_500761.1| Yarrowia lipolytica CLIB122, YALI0B11462g predi... 44 0.57
15emb|AL162615.13| Human DNA sequence from clone RP5-1041C10 on ch... 44 0.57
16dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.57
17dbj|AP004564.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.57
18dbj|AP004764.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.57
19gb|BT001999.1| Arabidopsis thaliana calnexin homolog (At5g07340)... 44 0.57
20emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB1... 44 0.57
21gb|AC159411.1| Trypanosoma brucei chromosome 3 clone RPCI93-1J15... 42 2.3
22gb|CP000066.1| Trypanosoma brucei chromosome 3, complete sequence 42 2.3
23gb|AC110197.9| Mus musculus chromosome 1, clone RP24-405O20, com... 42 2.3
24gb|AC102931.10| Mus musculus chromosome 7, clone RP24-221B5, com... 42 2.3
25gb|AC154746.2| Mus musculus BAC clone RP24-396N7 from chromosome... 42 2.3
26ref|XM_818675.1| Trypanosoma brucei TREU927 clone RPCI93-1J15 AT... 42 2.3
27gb|AC009785.8| Homo sapiens chromosome 7 clone RP11-198E23, comp... 42 2.3
28gb|AC037473.7|AC037473 Homo sapiens chromosome 18, clone CTD-213... 42 2.3
29gb|AY007706.1| Trypanosoma brucei brucei ATPase beta subunit mRN... 42 2.3
30gb|AC102797.5| Homo sapiens chromosome 18, clone RP11-157P23, co... 42 2.3
31gb|AC113087.11| Mus musculus chromosome 14, clone RP23-293A2, co... 42 2.3
32gb|AC117681.20| Mus musculus chromosome 1, clone RP23-436A22, co... 42 2.3
33emb|AL163912.1|ATT2I1 Arabidopsis thaliana DNA chromosome 5, BAC... 42 2.3
34gb|AC134598.3| Mus musculus BAC clone RP23-175C23 from 8, comple... 42 2.3
35gb|U08315.1|ATU08315 Arabidopsis thaliana Columbia calnexin homo... 42 2.3
36gb|AC165274.2| Mus musculus BAC clone RP24-97D3 from chromosome ... 40 8.9
37ref|XM_480553.1| Oryza sativa (japonica cultivar-group), mRNA 40 8.9
38gb|AC110509.21| Mus musculus chromosome 8, clone RP24-423G4, com... 40 8.9
39gb|AC136987.11| Mus musculus chromosome 16, clone RP24-129J16, c... 40 8.9
40gb|BT025368.1| Bos taurus heat shock 90kDa protein 1, beta (HSPC... 40 8.9
41gb|AC132278.3| Mus musculus BAC clone RP24-346C20 from chromosom... 40 8.9
42gb|AC124532.4| Mus musculus BAC clone RP23-312P22 from chromosom... 40 8.9
43ref|NM_133791.3| Mus musculus WW, C2 and coiled-coil domain cont... 40 8.9
44gb|BT012462.1| Drosophila melanogaster RE46485 full insert cDNA 40 8.9
45ref|XR_002746.1| PREDICTED: Mus musculus hypothetical LOC622901 ... 40 8.9
46gb|AF465639.1| Mus musculus strain C57BL/6 heat shock protein 84... 40 8.9
47ref|XM_749569.1| Aspergillus fumigatus Af293 hypothetical protei... 40 8.9
48ref|XM_761094.1| Theileria parva strain Muguga chromosome 1 DNA ... 40 8.9
49gb|AC101788.5| Mus musculus chromosome 15, clone RP24-148C8, com... 40 8.9
50emb|AL034428.4|HS705D16 Human DNA sequence from clone RP4-705D16... 40 8.9
51gb|BC088985.1| Mus musculus heat shock protein 90kDa alpha (cyto... 40 8.9
52gb|BC049951.1| Mus musculus heat shock protein 90kDa alpha (cyto... 40 8.9
53gb|BC044888.1| Mus musculus heat shock protein 90kDa alpha (cyto... 40 8.9
54emb|AL360089.13| Human DNA sequence from clone RP11-284P20 on ch... 40 8.9
55ref|NM_008302.2| Mus musculus heat shock protein 90kDa alpha (cy... 40 8.9
56gb|AC109542.6| Rattus norvegicus 1 BAC CH230-270O15 (Children's ... 40 8.9
57emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome 40 8.9
58emb|AL645527.20| Mouse DNA sequence from clone RP23-26L6 on chro... 40 8.9
59emb|AL645965.8| Mouse DNA sequence from clone RP23-65I14 on chro... 40 8.9
60gb|AC163677.2| Mus musculus BAC clone RP24-86D16 from chromosome... 40 8.9
61gb|BC067050.1| Mus musculus WW, C2 and coiled-coil domain contai... 40 8.9
62gb|BC054434.1| Mus musculus WW, C2 and coiled-coil domain contai... 40 8.9
63ref|NM_164827.1| Drosophila melanogaster CG17834-RC, transcript ... 40 8.9
64ref|NM_135398.2| Drosophila melanogaster CG17834-RA, transcript ... 40 8.9
65dbj|AK135366.1| Mus musculus 12 days embryo female mullerian duc... 40 8.9
66dbj|AK146205.1| Mus musculus TIB-55 BB88 cDNA, RIKEN full-length... 40 8.9
67dbj|AK147648.1| Mus musculus 14 days pregnant adult female place... 40 8.9
68gb|S46109.1| HSP90=heat shock protein [mice, heart, mRNA Partial... 40 8.9
69dbj|AK032989.1| Mus musculus 12 days embryo male wolffian duct i... 40 8.9
70dbj|AK084097.1| Mus musculus 12 days embryo spinal ganglion cDNA... 40 8.9
71gb|AC092234.1|AC092234 Drosophila melanogaster, chromosome 2L, r... 40 8.9
72dbj|AK079375.1| Mus musculus 16 days neonate cerebellum cDNA, RI... 40 8.9
73dbj|AK086956.1| Mus musculus 0 day neonate lung cDNA, RIKEN full... 40 8.9
74dbj|AK030768.1| Mus musculus 8 days embryo whole body cDNA, RIKE... 40 8.9
75gb|AC008330.3|AC008330 Drosophila melanogaster, chromosome 2L, r... 40 8.9
76gb|AC121609.3| Mus musculus BAC clone RP23-320N4 from chromosome... 40 8.9
77gb|AC139715.1| Homo sapiens BAC clone RP11-399D2 from 4, complet... 40 8.9
78gb|AC009006.6|AC009006 Homo sapiens chromosome 19 clone LLNLR-30... 40 8.9
79gb|U66566.1|RRU66566 Rattus norvegicus receptor type protein tyr... 40 8.9
80dbj|AK192311.1| Mus musculus cDNA, clone:Y1G0108H23, strand:plus... 40 8.9
81gb|AC010620.4|AC010620 Homo sapiens chromosome 19 clone CTD-3233... 40 8.9
82gb|AC008990.5|AC008990 Homo sapiens chromosome 19 clone LLNLF-24... 40 8.9
83dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome 40 8.9
84dbj|AP005416.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.9
85dbj|AP004589.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.9
86dbj|AB072369.1| Bos taurus hsp90beta mRNA for 90-kDa heat shock ... 40 8.9
87emb|CT009542.22| Pig DNA sequence from clone CH242-272H8 on chro... 40 8.9
88gb|AC090290.5| Mus musculus chromosome 15, clone RP23-393P12, co... 40 8.9
89gb|AC155272.3| Mus musculus BAC clone RP23-79N13 from chromosome... 40 8.9
90gb|AE003621.3| Drosophila melanogaster chromosome 2L, section 30... 40 8.9
91emb|CT030195.12| Mouse DNA sequence from clone RP23-191J8 on chr... 40 8.9
92gb|AE015451.1| Pseudomonas putida KT2440 complete genome 40 8.9
93emb|AL928958.15| Mouse DNA sequence from clone RP23-344N23 on ch... 40 8.9
94dbj|AP005205.3| Homo sapiens genomic DNA, chromosome 18 clone:RP... 40 8.9
95gb|AC160979.2| Mus musculus BAC clone RP23-437B11 from chromosom... 40 8.9
96emb|AL671238.13| Mouse DNA sequence from clone RP23-67D6 on chro... 40 8.9
97emb|AL772278.7| Mouse DNA sequence from clone RP23-416G5 on chro... 40 8.9
98emb|AL805969.13| Mouse DNA sequence from clone RP23-40L1 on chro... 40 8.9
99emb|AL671916.5| Mouse DNA sequence from clone RP23-294O1 on chro... 40 8.9
100emb|AJ249493.1|DME249493 Drosophila melanogaster mRNA for hypoth... 40 8.9
101gb|M36829.1|MUSHSP84B Mouse heat-shock protein hsp84 mRNA 40 8.9
102gb|M18186.1|MUSHSP84A Mouse 84 kD heat shock protein mRNA, compl... 40 8.9
103gb|L08129.1|VVCPTVB Volvox carteri GTP-binding protein (yptV3) g... 40 8.9
104dbj|AB045323.1| Mus musculus brain cDNA, clone MNCb-4173 40 8.9 
>ref|XM_472371.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1614

 Score =  212 bits (107), Expect = 1e-51
 Identities = 230/271 (84%)
 Strand = Plus / Minus

                                                                        
Query: 384  cgggcttcacaggtgccactggcttcttgccaccaaacaaggttctgaagagtacagtca 443
            ||||||||||||| ||| ||||||||||||| || |||| | | |||||||| |||||||
Sbjct: 1480 cgggcttcacaggagccgctggcttcttgccgccgaacaggatcctgaagagcacagtca 1421

                                                                        
Query: 444  caatgacgacaacgacggaggccagaatcgaaattgtaatgttcggctgcgtctctccct 503
            ||| ||||||||||| |||| |||||||   ||| || ||||| |||||| |||||||||
Sbjct: 1420 caaagacgacaacgatggagaccagaattccaatggtgatgttgggctgcttctctccct 1361

                                                                        
Query: 504  tctcaatcacttcaatgatcttggtcttgtatggttccaagaacgggatgtctgcgacct 563
            ||||||| || ||||||||||| |||||||| ||||||||||| || ||||| ||||  |
Sbjct: 1360 tctcaattacatcaatgatcttagtcttgtagggttccaagaatggaatgtcagcgagtt 1301

                                                                        
Query: 564  tgtacaaaatgtcgaagatcttcttctggaactcagaaaggccctctgatgcacctgctg 623
            |||||| || ||| |||||||||||||||||||||||||| || ||   |||  | ||||
Sbjct: 1300 tgtacagaacgtcaaagatcttcttctggaactcagaaagaccatcacctgctgccgctg 1241

                                           
Query: 624  cagcctcctcagccttctgcttttccttctc 654
            | |||||||||||||||| ||| ||||||||
Sbjct: 1240 ctgcctcctcagccttctccttctccttctc 1210
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>dbj|AK069118.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023008D14, full
            insert sequence
          Length = 2059

 Score =  212 bits (107), Expect = 1e-51
 Identities = 230/271 (84%)
 Strand = Plus / Minus

                                                                        
Query: 384  cgggcttcacaggtgccactggcttcttgccaccaaacaaggttctgaagagtacagtca 443
            ||||||||||||| ||| ||||||||||||| || |||| | | |||||||| |||||||
Sbjct: 1586 cgggcttcacaggagccgctggcttcttgccgccgaacaggatcctgaagagcacagtca 1527

                                                                        
Query: 444  caatgacgacaacgacggaggccagaatcgaaattgtaatgttcggctgcgtctctccct 503
            ||| ||||||||||| |||| |||||||   ||| || ||||| |||||| |||||||||
Sbjct: 1526 caaagacgacaacgatggagaccagaattccaatggtgatgttgggctgcttctctccct 1467

                                                                        
Query: 504  tctcaatcacttcaatgatcttggtcttgtatggttccaagaacgggatgtctgcgacct 563
            ||||||| || ||||||||||| |||||||| ||||||||||| || ||||| ||||  |
Sbjct: 1466 tctcaattacatcaatgatcttagtcttgtagggttccaagaatggaatgtcagcgagtt 1407

                                                                        
Query: 564  tgtacaaaatgtcgaagatcttcttctggaactcagaaaggccctctgatgcacctgctg 623
            |||||| || ||| |||||||||||||||||||||||||| || ||   |||  | ||||
Sbjct: 1406 tgtacagaacgtcaaagatcttcttctggaactcagaaagaccatcacctgctgccgctg 1347

                                           
Query: 624  cagcctcctcagccttctgcttttccttctc 654
            | |||||||||||||||| ||| ||||||||
Sbjct: 1346 ctgcctcctcagccttctccttctccttctc 1316
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>dbj|AK061185.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-209-E03, full
           insert sequence
          Length = 945

 Score =  212 bits (107), Expect = 1e-51
 Identities = 230/271 (84%)
 Strand = Plus / Minus

                                                                       
Query: 384 cgggcttcacaggtgccactggcttcttgccaccaaacaaggttctgaagagtacagtca 443
           ||||||||||||| ||| ||||||||||||| || |||| | | |||||||| |||||||
Sbjct: 472 cgggcttcacaggagccgctggcttcttgccgccgaacaggatcctgaagagcacagtca 413

                                                                       
Query: 444 caatgacgacaacgacggaggccagaatcgaaattgtaatgttcggctgcgtctctccct 503
           ||| ||||||||||| |||| |||||||   ||| || ||||| |||||| |||||||||
Sbjct: 412 caaagacgacaacgatggagaccagaattccaatggtgatgttgggctgcttctctccct 353

                                                                       
Query: 504 tctcaatcacttcaatgatcttggtcttgtatggttccaagaacgggatgtctgcgacct 563
           ||||||| || ||||||||||| |||||||| ||||||||||| || ||||| ||||  |
Sbjct: 352 tctcaattacatcaatgatcttagtcttgtagggttccaagaatggaatgtcagcgagtt 293

                                                                       
Query: 564 tgtacaaaatgtcgaagatcttcttctggaactcagaaaggccctctgatgcacctgctg 623
           |||||| || ||| |||||||||||||||||||||||||| || ||   |||  | ||||
Sbjct: 292 tgtacagaacgtcaaagatcttcttctggaactcagaaagaccatcacctgctgccgctg 233

                                          
Query: 624 cagcctcctcagccttctgcttttccttctc 654
           | |||||||||||||||| ||| ||||||||
Sbjct: 232 ctgcctcctcagccttctccttctccttctc 202
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>emb|X77569.1|ZMCNXRNA Z.mays CNX mRNA
          Length = 1559

 Score =  127 bits (64), Expect = 5e-26
 Identities = 147/174 (84%), Gaps = 3/174 (1%)
 Strand = Plus / Minus

                                                                        
Query: 482  atgttcggctgcgtctctcccttctcaatcacttcaatgatcttggtcttgtatggttcc 541
            ||||| |||||| ||||||||||||| || || ||||| |||||||||||||| ||| ||
Sbjct: 1059 atgttgggctgcttctctcccttctcgataacatcaataatcttggtcttgtagggtgcc 1000

                                                                        
Query: 542  aagaacgggatgtctgcgaccttgtacaaaatgtcgaagatcttcttctggaactcagaa 601
            |||||||| || || || | ||||||||  | ||| || |||||||||||||| ||||||
Sbjct: 999  aagaacggaatatcagcaatcttgtacaggacgtcaaaaatcttcttctggaagtcagaa 940

                                                                  
Query: 602  aggccctctgatgcacctgctgcagcctcctcagccttctgcttttccttctca 655
            || || ||   |||||| || ||||||||||||||||||| |||||||||||||
Sbjct: 939  agaccatc---tgcaccagcagcagcctcctcagccttctccttttccttctca 889



 Score = 48.1 bits (24), Expect = 0.037
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                        
Query: 296  tccttgtcgtcctctttctcctccttgtcgccgctgcttccagc 339
            ||||| || ||||||||||| |||||||| || |||||||||||
Sbjct: 1247 tccttttcatcctctttctcatccttgtcaccactgcttccagc 1204
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>gb|AY112482.1| Zea mays CL2224_1 mRNA sequence
          Length = 1661

 Score =  109 bits (55), Expect = 1e-20
 Identities = 154/187 (82%)
 Strand = Plus / Minus

                                                                        
Query: 363  tgggcttcttggtctcagcagcgggcttcacaggtgccactggcttcttgccaccaaaca 422
            |||||||||| | |||||| || || |||||||||||||| ||||||||||| |||||||
Sbjct: 1181 tgggcttcttcgcctcagctgcaggtttcacaggtgccaccggcttcttgcctccaaaca 1122

                                                                        
Query: 423  aggttctgaagagtacagtcacaatgacgacaacgacggaggccagaatcgaaattgtaa 482
             | |  ||||||| || || || |  ||||| || |||||| |||||||   ||| || |
Sbjct: 1121 ggatcttgaagagaacggtaacgaacacgacgacaacggagaccagaatgccaatagtga 1062

                                                                        
Query: 483  tgttcggctgcgtctctcccttctcaatcacttcaatgatcttggtcttgtatggttcca 542
            |||| |||||| ||||||||||||| || || |||||||||||||| ||||| ||| |||
Sbjct: 1061 tgttgggctgcttctctcccttctcgataacatcaatgatcttggttttgtagggtgcca 1002

                   
Query: 543  agaacgg 549
            |||||||
Sbjct: 1001 agaacgg 995



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                  
Query: 302  tcgtcctctttctcctccttgtcgccgctgcttccagc 339
            ||| |||||||||| ||||||||||| |||||||||||
Sbjct: 1239 tcgncctctttctcatccttgtcgccactgcttccagc 1202
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>emb|AL606610.3|OSJN00045 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0012E08,
             complete sequence
          Length = 106975

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 93/109 (85%)
 Strand = Plus / Plus

                                                                         
Query: 402   ctggcttcttgccaccaaacaaggttctgaagagtacagtcacaatgacgacaacgacgg 461
             ||||||||||||| || |||| | | |||||||| |||||||||| ||||||||||| ||
Sbjct: 77258 ctggcttcttgccgccgaacaggatcctgaagagcacagtcacaaagacgacaacgatgg 77317

                                                              
Query: 462   aggccagaatcgaaattgtaatgttcggctgcgtctctcccttctcaat 510
             || |||||||   ||| || ||||| |||||| ||||||||||||||||
Sbjct: 77318 agaccagaattccaatggtgatgttgggctgcttctctcccttctcaat 77366



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 66/76 (86%)
 Strand = Plus / Plus

                                                                         
Query: 516   caatgatcttggtcttgtatggttccaagaacgggatgtctgcgaccttgtacaaaatgt 575
             |||||||||| |||||||| ||||||||||| || ||||| ||||  ||||||| || ||
Sbjct: 77488 caatgatcttagtcttgtagggttccaagaatggaatgtcagcgagtttgtacagaacgt 77547

                             
Query: 576   cgaagatcttcttctg 591
             | ||||||||||||||
Sbjct: 77548 caaagatcttcttctg 77563



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                
Query: 620   gctgcagcctcctcagccttctgcttttccttctc 654
             ||||| |||||||||||||||| ||| ||||||||
Sbjct: 77703 gctgctgcctcctcagccttctccttctccttctc 77737
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 93/109 (85%)
 Strand = Plus / Plus

                                                                            
Query: 402      ctggcttcttgccaccaaacaaggttctgaagagtacagtcacaatgacgacaacgacgg 461
                ||||||||||||| || |||| | | |||||||| |||||||||| ||||||||||| ||
Sbjct: 19922450 ctggcttcttgccgccgaacaggatcctgaagagcacagtcacaaagacgacaacgatgg 19922509

                                                                 
Query: 462      aggccagaatcgaaattgtaatgttcggctgcgtctctcccttctcaat 510
                || |||||||   ||| || ||||| |||||| ||||||||||||||||
Sbjct: 19922510 agaccagaattccaatggtgatgttgggctgcttctctcccttctcaat 19922558



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 66/76 (86%)
 Strand = Plus / Plus

                                                                            
Query: 516      caatgatcttggtcttgtatggttccaagaacgggatgtctgcgaccttgtacaaaatgt 575
                |||||||||| |||||||| ||||||||||| || ||||| ||||  ||||||| || ||
Sbjct: 19922680 caatgatcttagtcttgtagggttccaagaatggaatgtcagcgagtttgtacagaacgt 19922739

                                
Query: 576      cgaagatcttcttctg 591
                | ||||||||||||||
Sbjct: 19922740 caaagatcttcttctg 19922755



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                   
Query: 620      gctgcagcctcctcagccttctgcttttccttctc 654
                ||||| |||||||||||||||| ||| ||||||||
Sbjct: 19922895 gctgctgcctcctcagccttctccttctccttctc 19922929
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>ref|NM_120816.2| Arabidopsis thaliana calcium ion binding AT5G07340 mRNA, complete cds
          Length = 1877

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                      
Query: 551  atgtctgcgaccttgtacaaaatgtcgaagatcttcttctgg 592
            |||||||| ||||||||||| | |||||| | ||||||||||
Sbjct: 1418 atgtctgcaaccttgtacaagaggtcgaacaccttcttctgg 1377
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>gb|AC160118.2| Mus musculus BAC clone RP23-440L7 from chromosome 9, complete
            sequence
          Length = 198672

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 617  cctgctgcagcctcctcagcct 638
            ||||||||||||||||||||||
Sbjct: 4821 cctgctgcagcctcctcagcct 4842
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>gb|AC114674.10| Mus musculus chromosome 9, clone RP24-209N21, complete sequence
          Length = 203120

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 617    cctgctgcagcctcctcagcct 638
              ||||||||||||||||||||||
Sbjct: 149354 cctgctgcagcctcctcagcct 149375
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>gb|AC140235.3| Mus musculus BAC clone RP24-272D15 from chromosome 7, complete sequence
          Length = 185617

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 296   tccttgtcgtcctctttctcctcctt 321
             |||||||| |||||||||||||||||
Sbjct: 86906 tccttgtcttcctctttctcctcctt 86931
to top
>gb|AC121995.2| Mus musculus BAC clone RP24-310M4 from 7, complete sequence
          Length = 126991

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 296   tccttgtcgtcctctttctcctcctt 321
             |||||||| |||||||||||||||||
Sbjct: 16857 tccttgtcttcctctttctcctcctt 16832
to top
>gb|BT010385.1| Arabidopsis thaliana At5g07340 mRNA, complete cds
          Length = 1599

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                      
Query: 551  atgtctgcgaccttgtacaaaatgtcgaagatcttcttctgg 592
            |||||||| ||||||||||| | |||||| | ||||||||||
Sbjct: 1331 atgtctgcaaccttgtacaagaggtcgaacaccttcttctgg 1290
to top
>ref|XM_500761.1| Yarrowia lipolytica CLIB122, YALI0B11462g predicted mRNA
          Length = 4251

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 296  tccttgtcgtcctctttctcctccttgtcg 325
            |||||||||||||| || ||||||||||||
Sbjct: 3830 tccttgtcgtcctccttatcctccttgtcg 3801
to top
>emb|AL162615.13| Human DNA sequence from clone RP5-1041C10 on chromosome 20 Contains the
             5' end of the B4GALT5 gene for UDP-Gal:betaGlcNAc beta
             1,4-galactosyltransferase polypeptide 5, b, the SNRPFP1
             gene for small nuclear ribonucleoprotein polypeptide F
             pseudogene 1, a cytokine-like nuclear factor n-pac (N-PAC)
             pseudogene, the 5' end of the SLC9A8 gene for solute
             carrier family 9 (sodium/hydrogen exchanger) isoform 8 and
             two CpG islands, complete sequence
          Length = 140092

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 610   tgatgcacctgctgcagcctcc 631
             ||||||||||||||||||||||
Sbjct: 99804 tgatgcacctgctgcagcctcc 99825
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 285      ggcgtggcgcatccttgtcgtc 306
                ||||||||||||||||||||||
Sbjct: 21641514 ggcgtggcgcatccttgtcgtc 21641535



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 313     ctcctccttgtcgccgctgc 332
               ||||||||||||||||||||
Sbjct: 5750625 ctcctccttgtcgccgctgc 5750644
to top
>dbj|AP004564.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
            clone:P0479C12
          Length = 136799

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 285  ggcgtggcgcatccttgtcgtc 306
            ||||||||||||||||||||||
Sbjct: 9084 ggcgtggcgcatccttgtcgtc 9105
to top
>dbj|AP004764.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0708B04
          Length = 170523

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 285    ggcgtggcgcatccttgtcgtc 306
              ||||||||||||||||||||||
Sbjct: 101688 ggcgtggcgcatccttgtcgtc 101709
to top
>gb|BT001999.1| Arabidopsis thaliana calnexin homolog (At5g07340) mRNA, complete cds
          Length = 1879

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                      
Query: 551  atgtctgcgaccttgtacaaaatgtcgaagatcttcttctgg 592
            |||||||| ||||||||||| | |||||| | ||||||||||
Sbjct: 1420 atgtctgcaaccttgtacaagaggtcgaacaccttcttctgg 1379
to top
>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica
          Length = 3066374

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                             
Query: 296     tccttgtcgtcctctttctcctccttgtcg 325
               |||||||||||||| || ||||||||||||
Sbjct: 1545679 tccttgtcgtcctccttatcctccttgtcg 1545650
to top
>gb|AC159411.1| Trypanosoma brucei chromosome 3 clone RPCI93-1J15, complete sequence
          Length = 157158

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 623   gcagcctcctcagccttctgcttttccttctca 655
             ||||||||||||||| ||| |||| ||||||||
Sbjct: 75883 gcagcctcctcagccatcttctttgccttctca 75915
to top
>gb|CP000066.1| Trypanosoma brucei chromosome 3, complete sequence
          Length = 1653225

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                               
Query: 623    gcagcctcctcagccttctgcttttccttctca 655
              ||||||||||||||| ||| |||| ||||||||
Sbjct: 345993 gcagcctcctcagccatcttctttgccttctca 345961
to top
>gb|AC110197.9| Mus musculus chromosome 1, clone RP24-405O20, complete sequence
          Length = 144856

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 410    ttgccaccaaacaaggttctg 430
              |||||||||||||||||||||
Sbjct: 102541 ttgccaccaaacaaggttctg 102521
to top
>gb|AC102931.10| Mus musculus chromosome 7, clone RP24-221B5, complete sequence
          Length = 164298

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 296   tccttgtcgtcctctttctcctcct 320
             |||||||| ||||||||||||||||
Sbjct: 15558 tccttgtcctcctctttctcctcct 15582
to top
>gb|AC154746.2| Mus musculus BAC clone RP24-396N7 from chromosome 14, complete
            sequence
          Length = 184783

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 410  ttgccaccaaacaaggttctgaaga 434
            ||||||||| |||||||||||||||
Sbjct: 5041 ttgccaccatacaaggttctgaaga 5017
to top
>ref|XM_818675.1| Trypanosoma brucei TREU927 clone RPCI93-1J15 ATP synthase subunit
            beta precursor (Tb927.3.1380) partial mRNA
          Length = 1560

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 623  gcagcctcctcagccttctgcttttccttctca 655
            ||||||||||||||| ||| |||| ||||||||
Sbjct: 1511 gcagcctcctcagccatcttctttgccttctca 1479
to top
>gb|AC009785.8| Homo sapiens chromosome 7 clone RP11-198E23, complete sequence
          Length = 179145

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 296    tccttgtcgtcctctttctcctcct 320
              |||||||| ||||||||||||||||
Sbjct: 115679 tccttgtcttcctctttctcctcct 115703
to top
>gb|AC037473.7|AC037473 Homo sapiens chromosome 18, clone CTD-2130O13, complete sequence
          Length = 126976

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 609   ctgatgcacctgctgcagcct 629
             |||||||||||||||||||||
Sbjct: 88764 ctgatgcacctgctgcagcct 88784
to top
>gb|AY007706.1| Trypanosoma brucei brucei ATPase beta subunit mRNA, complete cds;
            nuclear gene for kinetoplast product
          Length = 1557

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 623  gcagcctcctcagccttctgcttttccttctca 655
            ||||||||||||||| ||| |||| ||||||||
Sbjct: 1508 gcagcctcctcagccatcttctttgccttctca 1476
to top
>gb|AC102797.5| Homo sapiens chromosome 18, clone RP11-157P23, complete sequence
          Length = 179632

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 609    ctgatgcacctgctgcagcct 629
              |||||||||||||||||||||
Sbjct: 163169 ctgatgcacctgctgcagcct 163149
to top
>gb|AC113087.11| Mus musculus chromosome 14, clone RP23-293A2, complete sequence
          Length = 166952

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 410    ttgccaccaaacaaggttctgaaga 434
              ||||||||| |||||||||||||||
Sbjct: 156641 ttgccaccatacaaggttctgaaga 156617
to top
>gb|AC117681.20| Mus musculus chromosome 1, clone RP23-436A22, complete sequence
          Length = 198868

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 410   ttgccaccaaacaaggttctg 430
             |||||||||||||||||||||
Sbjct: 13011 ttgccaccaaacaaggttctg 12991
to top
>emb|AL163912.1|ATT2I1 Arabidopsis thaliana DNA chromosome 5, BAC clone T2I1 (ESSA project)
          Length = 116763

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                      
Query: 551   atgtctgcgaccttgtacaaaatgtcgaagatcttcttctg 591
             |||||||| ||||||||||| | |||||| | |||||||||
Sbjct: 34196 atgtctgcaaccttgtacaagaggtcgaacaccttcttctg 34156
to top
>gb|AC134598.3| Mus musculus BAC clone RP23-175C23 from 8, complete sequence
          Length = 205622

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 296   tccttgtcgtcctctttctcctcct 320
             ||||| |||||||||||||||||||
Sbjct: 57356 tccttatcgtcctctttctcctcct 57380
to top
>gb|U08315.1|ATU08315 Arabidopsis thaliana Columbia calnexin homolog gene, complete cds
          Length = 3144

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 551  atgtctgcgaccttgtacaaaatgtcgaagatcttcttctg 591
            |||||||| ||||||||||| | |||||| | |||||||||
Sbjct: 2081 atgtctgcaaccttgtacaagaggtcgaacaccttcttctg 2041
to top
>gb|AC165274.2| Mus musculus BAC clone RP24-97D3 from chromosome 16, complete sequence
          Length = 175488

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 417    caaacaaggttctgaagagtacag 440
              ||||||||||||||||||| ||||
Sbjct: 162242 caaacaaggttctgaagagcacag 162219
to top
>ref|XM_480553.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 348

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 313 ctcctccttgtcgccgctgc 332
           ||||||||||||||||||||
Sbjct: 60  ctcctccttgtcgccgctgc 79
to top
>gb|AC110509.21| Mus musculus chromosome 8, clone RP24-423G4, complete sequence
          Length = 190160

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 304   gtcctctttctcctccttgtcgcc 327
             ||||||| ||||||||||||||||
Sbjct: 38879 gtcctctctctcctccttgtcgcc 38902
to top
>gb|AC136987.11| Mus musculus chromosome 16, clone RP24-129J16, complete sequence
          Length = 155372

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 417    caaacaaggttctgaagagtacag 440
              ||||||||||||||||||| ||||
Sbjct: 132115 caaacaaggttctgaagagcacag 132138
to top
>gb|BT025368.1| Bos taurus heat shock 90kDa protein 1, beta (HSPCB), mRNA, complete
            cds
          Length = 2526

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 345  catcaggaacaacagcactgggct 368
            ||||||||||| ||||||||||||
Sbjct: 2206 catcaggaacagcagcactgggct 2183
to top
>gb|AC132278.3| Mus musculus BAC clone RP24-346C20 from chromosome 8, complete sequence
          Length = 154524

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 305   tcctctttctcctccttgtc 324
             ||||||||||||||||||||
Sbjct: 72898 tcctctttctcctccttgtc 72917
to top
>gb|AC124532.4| Mus musculus BAC clone RP23-312P22 from chromosome 15, complete
             sequence
          Length = 218337

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 616   acctgctgcagcctcctcag 635
             ||||||||||||||||||||
Sbjct: 61653 acctgctgcagcctcctcag 61634
to top
>ref|NM_133791.3| Mus musculus WW, C2 and coiled-coil domain containing 2 (Wwc2), mRNA
          Length = 5045

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 304  gtcctctttctcctccttgtcgcc 327
            ||||||| ||||||||||||||||
Sbjct: 2002 gtcctctctctcctccttgtcgcc 2025
to top
>gb|BT012462.1| Drosophila melanogaster RE46485 full insert cDNA
          Length = 1858

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 297  ccttgtcgtcctctttctcctcct 320
            ||||||||||||| ||||||||||
Sbjct: 1016 ccttgtcgtcctccttctcctcct 993
to top
>ref|XR_002746.1| PREDICTED: Mus musculus hypothetical LOC622901 (LOC622901), mRNA
          Length = 2147

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 345  catcaggaacaacagcactgggct 368
            ||||||||||| ||||||||||||
Sbjct: 2091 catcaggaacagcagcactgggct 2068
to top
>gb|AF465639.1| Mus musculus strain C57BL/6 heat shock protein 84b (Hsp84b) mRNA,
            complete cds
          Length = 2525

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 345  catcaggaacaacagcactgggct 368
            ||||||||||| ||||||||||||
Sbjct: 2214 catcaggaacagcagcactgggct 2191
to top
>ref|XM_749569.1| Aspergillus fumigatus Af293 hypothetical protein (Afu3g09570)
           partial mRNA
          Length = 618

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 623 gcagcctcctcagccttctgcttttccttctc 654
           |||||||| || ||| ||||||||||||||||
Sbjct: 551 gcagcctcttccgccatctgcttttccttctc 520
to top
>ref|XM_761094.1| Theileria parva strain Muguga chromosome 1 DNA replication
           licensing factor MCM4 (TP01_0666) partial mRNA
          Length = 3051

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 502 cttctcaatcacttcaatga 521
           ||||||||||||||||||||
Sbjct: 898 cttctcaatcacttcaatga 917
to top
>gb|AC101788.5| Mus musculus chromosome 15, clone RP24-148C8, complete sequence
          Length = 190073

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 305   tcctctttctcctccttgtc 324
             ||||||||||||||||||||
Sbjct: 33379 tcctctttctcctccttgtc 33398
to top
>emb|AL034428.4|HS705D16 Human DNA sequence from clone RP4-705D16 on chromosome 20p11.22-12.2
             Contains the SNRPB2 gene for small nuclear
             ribonucleoprotein polypeptide B'', the OTOR gene for
             otoraplin, a novel gene and a CpG island, complete
             sequence
          Length = 121151

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 305   tcctctttctcctccttgtc 324
             ||||||||||||||||||||
Sbjct: 89245 tcctctttctcctccttgtc 89226
to top
>gb|BC088985.1| Mus musculus heat shock protein 90kDa alpha (cytosolic), class B
            member 1, mRNA (cDNA clone MGC:115780 IMAGE:6808699),
            complete cds
          Length = 2520

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 345  catcaggaacaacagcactgggct 368
            ||||||||||| ||||||||||||
Sbjct: 2208 catcaggaacagcagcactgggct 2185
to top
>gb|BC049951.1| Mus musculus heat shock protein 90kDa alpha (cytosolic), class B
            member 1, mRNA (cDNA clone IMAGE:4163314), partial cds
          Length = 1355

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 345  catcaggaacaacagcactgggct 368
            ||||||||||| ||||||||||||
Sbjct: 1036 catcaggaacagcagcactgggct 1013
to top
>gb|BC044888.1| Mus musculus heat shock protein 90kDa alpha (cytosolic), class B
            member 1, mRNA (cDNA clone IMAGE:3588159), partial cds
          Length = 1376

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 345  catcaggaacaacagcactgggct 368
            ||||||||||| ||||||||||||
Sbjct: 1082 catcaggaacagcagcactgggct 1059
to top
>emb|AL360089.13| Human DNA sequence from clone RP11-284P20 on chromosome 9 Contains the
             3' end of a novel gene, a pescadillo homolog 1, containing
             BRCT domain (zebrafish) (PES1) pseudogene, a novel gene
             and a ribosomal protein L3 (RPL3) pseudogene, complete
             sequence
          Length = 129263

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 299   ttgtcgtcctctttctcctc 318
             ||||||||||||||||||||
Sbjct: 53251 ttgtcgtcctctttctcctc 53232
to top
>ref|NM_008302.2| Mus musculus heat shock protein 90kDa alpha (cytosolic), class B
            member 1 (Hsp90ab1), mRNA
          Length = 2525

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 345  catcaggaacaacagcactgggct 368
            ||||||||||| ||||||||||||
Sbjct: 2214 catcaggaacagcagcactgggct 2191
to top
>gb|AC109542.6| Rattus norvegicus 1 BAC CH230-270O15 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 246913

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 302   tcgtcctctttctcctcctt 321
             ||||||||||||||||||||
Sbjct: 94967 tcgtcctctttctcctcctt 94948
to top
>emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome
          Length = 5205140

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 500   cccttctcaatcacttcaatgatc 523
             ||||||||||||||||| ||||||
Sbjct: 76978 cccttctcaatcacttccatgatc 77001
to top
>emb|AL645527.20| Mouse DNA sequence from clone RP23-26L6 on chromosome 11 Contains the
             Vamp2 gene for vesicle-associated membrane 2, the Per1
             gene for period homolog 1 (Drosophila), the Hes7 gene for
             hairy and enhancer of split 7 (Drosophila), the Aloxe3
             gene for arachidonate lipoxygenase 3, the Alox12b gene for
             arachidonate 12-lipoxygenase 12R type, the Alox15b gene
             for arachidonate 15-lipoxygenase second type, the Gucy2e
             gene for guanylate cyclase 2e, a novel gene, the gene for
             LYST-interacting protein LIP8 (Lip8-pending), the gene for
             the likely ortholog of H. sapiens trafficking protein
             particle complex 1 (TRAPPC1)), the Kcnab3 gene for
             potassium voltage-gated channel shaker-related subfamily
             beta member 3, a novel gene, the 3' end of the Chd3 gene
             for chromodomain helicase DNA binding protein 3 and six
             CpG islands, complete sequence
          Length = 261224

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 585   tcttctggaactcagaaagg 604
             ||||||||||||||||||||
Sbjct: 44405 tcttctggaactcagaaagg 44424
to top
>emb|AL645965.8| Mouse DNA sequence from clone RP23-65I14 on chromosome 11 Contains the
             5' end of the gene for a novel protein (330000P08Rik)
             (Luc7a), the gene for a novel protein (5530600A18Rik), the
             Abcc3 gene for ATP-binding cassette sub-family C
             (CFTR/MRP) member 3, the Cacna1g gene for calcium channel
             voltage-dependent T type alpha 1G subunit, the 3' end of
             the Tisp78 gene for transcript increased in spermiogenesis
             78 and one CpG island, complete sequence
          Length = 161978

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 85    ctgattcagaacagcacaca 104
             ||||||||||||||||||||
Sbjct: 85656 ctgattcagaacagcacaca 85675
to top
>gb|AC163677.2| Mus musculus BAC clone RP24-86D16 from chromosome 17, complete sequence
          Length = 222584

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 345   catcaggaacaacagcactgggct 368
             ||||||||||| ||||||||||||
Sbjct: 36428 catcaggaacagcagcactgggct 36405
to top
>gb|BC067050.1| Mus musculus WW, C2 and coiled-coil domain containing 2, mRNA (cDNA
            clone MGC:91333 IMAGE:30537299), complete cds
          Length = 5045

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 304  gtcctctttctcctccttgtcgcc 327
            ||||||| ||||||||||||||||
Sbjct: 2002 gtcctctctctcctccttgtcgcc 2025
to top
>gb|BC054434.1| Mus musculus WW, C2 and coiled-coil domain containing 2, mRNA (cDNA
           clone IMAGE:5371651), partial cds
          Length = 2372

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 304 gtcctctttctcctccttgtcgcc 327
           ||||||| ||||||||||||||||
Sbjct: 283 gtcctctctctcctccttgtcgcc 306
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>ref|NM_164827.1| Drosophila melanogaster CG17834-RC, transcript variant C (CG17834),
            mRNA
          Length = 1865

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 297  ccttgtcgtcctctttctcctcct 320
            ||||||||||||| ||||||||||
Sbjct: 1016 ccttgtcgtcctccttctcctcct 993
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>ref|NM_135398.2| Drosophila melanogaster CG17834-RA, transcript variant A (CG17834),
            mRNA
          Length = 2055

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 297  ccttgtcgtcctctttctcctcct 320
            ||||||||||||| ||||||||||
Sbjct: 1206 ccttgtcgtcctccttctcctcct 1183
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>dbj|AK135366.1| Mus musculus 12 days embryo female mullerian duct includes
            surrounding region cDNA, RIKEN full-length enriched
            library, clone:6820406O06 product:heat shock protein 1,
            beta, full insert sequence
          Length = 2514

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 345  catcaggaacaacagcactgggct 368
            ||||||||||| ||||||||||||
Sbjct: 2222 catcaggaacagcagcactgggct 2199
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>dbj|AK146205.1| Mus musculus TIB-55 BB88 cDNA, RIKEN full-length enriched library,
            clone:I730034B14 product:heat shock protein 1, beta, full
            insert sequence
          Length = 2517

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 345  catcaggaacaacagcactgggct 368
            ||||||||||| ||||||||||||
Sbjct: 2225 catcaggaacagcagcactgggct 2202
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>dbj|AK147648.1| Mus musculus 14 days pregnant adult female placenta cDNA, RIKEN
            full-length enriched library, clone:M5C1098O04
            product:claudin 22, full insert sequence
          Length = 6548

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 304  gtcctctttctcctccttgtcgcc 327
            ||||||| ||||||||||||||||
Sbjct: 1996 gtcctctctctcctccttgtcgcc 2019
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>gb|S46109.1| HSP90=heat shock protein [mice, heart, mRNA Partial, 806 nt]
          Length = 806

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 345 catcaggaacaacagcactgggct 368
           ||||||||||| ||||||||||||
Sbjct: 529 catcaggaacagcagcactgggct 506
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>dbj|AK032989.1| Mus musculus 12 days embryo male wolffian duct includes surrounding
            region cDNA, RIKEN full-length enriched library,
            clone:6720486A01 product:Hypothetical WW/rsp5/WWP domain
            profile containing protein (Fragment), full insert
            sequence
          Length = 3225

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 304  gtcctctttctcctccttgtcgcc 327
            ||||||| ||||||||||||||||
Sbjct: 1068 gtcctctctctcctccttgtcgcc 1091
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>dbj|AK084097.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length
            enriched library, clone:D130091M03 product:heat shock
            protein, 84 kDa 1, full insert sequence
          Length = 2516

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 345  catcaggaacaacagcactgggct 368
            ||||||||||| ||||||||||||
Sbjct: 2222 catcaggaacagcagcactgggct 2199
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>gb|AC092234.1|AC092234 Drosophila melanogaster, chromosome 2L, region 29C-29D, BAC clone
              BACR02I15, complete sequence
          Length = 186490

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 297    ccttgtcgtcctctttctcctcct 320
              ||||||||||||| ||||||||||
Sbjct: 162784 ccttgtcgtcctccttctcctcct 162761
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>dbj|AK079375.1| Mus musculus 16 days neonate cerebellum cDNA, RIKEN full-length
            enriched library, clone:9630047L14 product:hypothetical
            WW/rsp5/WWP domain profile containing protein, full
            insert sequence
          Length = 3974

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 304  gtcctctttctcctccttgtcgcc 327
            ||||||| ||||||||||||||||
Sbjct: 1838 gtcctctctctcctccttgtcgcc 1861
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>dbj|AK086956.1| Mus musculus 0 day neonate lung cDNA, RIKEN full-length enriched
            library, clone:E030015N01 product:weakly similar to
            CG12600 PROTEIN [Drosophila melanogaster], full insert
            sequence
          Length = 2096

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 304  gtcctctttctcctccttgtcgcc 327
            ||||||| ||||||||||||||||
Sbjct: 1832 gtcctctctctcctccttgtcgcc 1855
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>dbj|AK030768.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length
            enriched library, clone:5730586E07 product:heat shock
            protein, 84 kDa 1, full insert sequence
          Length = 2512

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 345  catcaggaacaacagcactgggct 368
            ||||||||||| ||||||||||||
Sbjct: 2220 catcaggaacagcagcactgggct 2197
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>gb|AC008330.3|AC008330 Drosophila melanogaster, chromosome 2L, region 29D-29E, BAC clone
             BACR23B08, complete sequence
          Length = 161927

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 297   ccttgtcgtcctctttctcctcct 320
             ||||||||||||| ||||||||||
Sbjct: 75532 ccttgtcgtcctccttctcctcct 75509
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>gb|AC121609.3| Mus musculus BAC clone RP23-320N4 from chromosome 15, complete
            sequence
          Length = 195165

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 305  tcctctttctcctccttgtc 324
            ||||||||||||||||||||
Sbjct: 8999 tcctctttctcctccttgtc 8980
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>gb|AC139715.1| Homo sapiens BAC clone RP11-399D2 from 4, complete sequence
          Length = 174076

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 636   ccttctgcttttccttctca 655
             ||||||||||||||||||||
Sbjct: 45694 ccttctgcttttccttctca 45713
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>gb|AC009006.6|AC009006 Homo sapiens chromosome 19 clone LLNLR-301G11, complete sequence
          Length = 37262

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 612   atgcacctgctgcagcctcc 631
             ||||||||||||||||||||
Sbjct: 12702 atgcacctgctgcagcctcc 12683
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>gb|U66566.1|RRU66566 Rattus norvegicus receptor type protein tyrosine phosphatase psi
           (RPTPpsi) mRNA, partial cds
          Length = 1627

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 297 ccttgtcgtcctctttctcctcct 320
           ||||||||||||| ||||||||||
Sbjct: 463 ccttgtcgtcctcattctcctcct 486
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>dbj|AK192311.1| Mus musculus cDNA, clone:Y1G0108H23, strand:plus,
           reference:ENSEMBL:Mouse-Transcript-
           ENST:ENSMUST00000024739, based on BLAT search
          Length = 376

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 345 catcaggaacaacagcactgggct 368
           ||||||||||| ||||||||||||
Sbjct: 76  catcaggaacagcagcactgggct 53
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>gb|AC010620.4|AC010620 Homo sapiens chromosome 19 clone CTD-3233P19, complete sequence
          Length = 156835

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 612    atgcacctgctgcagcctcc 631
              ||||||||||||||||||||
Sbjct: 109794 atgcacctgctgcagcctcc 109775
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>gb|AC008990.5|AC008990 Homo sapiens chromosome 19 clone LLNLF-24D8, complete sequence
          Length = 36025

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 612  atgcacctgctgcagcctcc 631
            ||||||||||||||||||||
Sbjct: 2176 atgcacctgctgcagcctcc 2195
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>dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome
          Length = 5277274

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 500   cccttctcaatcacttcaatgatc 523
             ||||||||||||||||| ||||||
Sbjct: 71445 cccttctcaatcacttccatgatc 71468
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>dbj|AP005416.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OSJNBb0094P23
          Length = 149341

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 313    ctcctccttgtcgccgctgc 332
              ||||||||||||||||||||
Sbjct: 105250 ctcctccttgtcgccgctgc 105269
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>dbj|AP004589.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
            clone:P0556A11
          Length = 138096

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 313  ctcctccttgtcgccgctgc 332
            ||||||||||||||||||||
Sbjct: 4770 ctcctccttgtcgccgctgc 4789
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>dbj|AB072369.1| Bos taurus hsp90beta mRNA for 90-kDa heat shock protein beta,
            complete cds
          Length = 2518

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 345  catcaggaacaacagcactgggct 368
            ||||||||||| ||||||||||||
Sbjct: 2201 catcaggaacagcagcactgggct 2178
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>emb|CT009542.22| Pig DNA sequence from clone CH242-272H8 on chromosome 7, complete
             sequence
          Length = 177899

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 345   catcaggaacaacagcactgggct 368
             ||||||||||| ||||||||||||
Sbjct: 58842 catcaggaacagcagcactgggct 58819
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>gb|AC090290.5| Mus musculus chromosome 15, clone RP23-393P12, complete sequence
          Length = 201650

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 616   acctgctgcagcctcctcag 635
             ||||||||||||||||||||
Sbjct: 67445 acctgctgcagcctcctcag 67464
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>gb|AC155272.3| Mus musculus BAC clone RP23-79N13 from chromosome 13, complete
            sequence
          Length = 213306

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 305  tcctctttctcctccttgtc 324
            ||||||||||||||||||||
Sbjct: 9267 tcctctttctcctccttgtc 9248
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>gb|AE003621.3| Drosophila melanogaster chromosome 2L, section 30 of 83 of the complete
              sequence
          Length = 308031

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 297    ccttgtcgtcctctttctcctcct 320
              ||||||||||||| ||||||||||
Sbjct: 178946 ccttgtcgtcctccttctcctcct 178923
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>emb|CT030195.12| Mouse DNA sequence from clone RP23-191J8 on chromosome 13, complete
              sequence
          Length = 219800

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 305    tcctctttctcctccttgtc 324
              ||||||||||||||||||||
Sbjct: 174350 tcctctttctcctccttgtc 174331
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>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 343     ggcatcaggaacaacagcac 362
               ||||||||||||||||||||
Sbjct: 4078033 ggcatcaggaacaacagcac 4078052
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>emb|AL928958.15| Mouse DNA sequence from clone RP23-344N23 on chromosome 2, complete
             sequence
          Length = 163351

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 294   catccttgtcgtcctctttctcctcctt 321
             ||||||| || |||||||||||||||||
Sbjct: 14206 catccttctcctcctctttctcctcctt 14179
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>dbj|AP005205.3| Homo sapiens genomic DNA, chromosome 18 clone:RP11-91I8, complete
             sequence
          Length = 134463

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 607   ctctgatgcacctgctgcag 626
             ||||||||||||||||||||
Sbjct: 14772 ctctgatgcacctgctgcag 14791
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>gb|AC160979.2| Mus musculus BAC clone RP23-437B11 from chromosome 15, complete
             sequence
          Length = 216014

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 616   acctgctgcagcctcctcag 635
             ||||||||||||||||||||
Sbjct: 23431 acctgctgcagcctcctcag 23450
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>emb|AL671238.13| Mouse DNA sequence from clone RP23-67D6 on chromosome 4, complete
             sequence
          Length = 216190

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 302   tcgtcctctttctcctcctt 321
             ||||||||||||||||||||
Sbjct: 82736 tcgtcctctttctcctcctt 82717
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>emb|AL772278.7| Mouse DNA sequence from clone RP23-416G5 on chromosome 4, complete
             sequence
          Length = 199565

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 345   catcaggaacaacagcactg 364
             ||||||||||||||||||||
Sbjct: 74457 catcaggaacaacagcactg 74438
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>emb|AL805969.13| Mouse DNA sequence from clone RP23-40L1 on chromosome 4, complete
              sequence
          Length = 252953

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 90     tcagaacagcacacaaacaaccga 113
              |||||||||| |||||||||||||
Sbjct: 215101 tcagaacagctcacaaacaaccga 215124
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>emb|AL671916.5| Mouse DNA sequence from clone RP23-294O1 on chromosome X, complete
             sequence
          Length = 205436

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 345   catcaggaacaacagcactgggct 368
             ||||||||||| ||||||||||||
Sbjct: 60108 catcaggaacagcagcactgggct 60085
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>emb|AJ249493.1|DME249493 Drosophila melanogaster mRNA for hypothetical protein (anon-29Da
           gene) alternatively spliced form
          Length = 1705

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 297 ccttgtcgtcctctttctcctcct 320
           ||||||||||||| ||||||||||
Sbjct: 857 ccttgtcgtcctccttctcctcct 834
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>gb|M36829.1|MUSHSP84B Mouse heat-shock protein hsp84 mRNA
          Length = 2499

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 345  catcaggaacaacagcactgggct 368
            ||||||||||| ||||||||||||
Sbjct: 2202 catcaggaacagcagcactgggct 2179
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>gb|M18186.1|MUSHSP84A Mouse 84 kD heat shock protein mRNA, complete cds
          Length = 2509

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 345  catcaggaacaacagcactgggct 368
            ||||||||||| ||||||||||||
Sbjct: 2213 catcaggaacagcagcactgggct 2190
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>gb|L08129.1|VVCPTVB Volvox carteri GTP-binding protein (yptV3) gene, complete CDS
          Length = 5819

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 278  gaccttcggcgtggcgcatc 297
            ||||||||||||||||||||
Sbjct: 2476 gaccttcggcgtggcgcatc 2495
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>dbj|AB045323.1| Mus musculus brain cDNA, clone MNCb-4173
          Length = 5075

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 304  gtcctctttctcctccttgtcgcc 327
            ||||||| ||||||||||||||||
Sbjct: 2024 gtcctctctctcctccttgtcgcc 2047


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,743,237
Number of Sequences: 3902068
Number of extensions: 5743237
Number of successful extensions: 122991
Number of sequences better than 10.0: 104
Number of HSP's better than 10.0 without gapping: 105
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 122510
Number of HSP's gapped (non-prelim): 479
length of query: 655
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 632
effective length of database: 17,143,297,704
effective search space: 10834564148928
effective search space used: 10834564148928
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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