| Clone Name | rbags11k12 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY104391.1| Zea mays PCO073745 mRNA sequence Length = 1301 Score = 192 bits (97), Expect = 1e-45 Identities = 202/237 (85%) Strand = Plus / Minus Query: 400 cctgttgtgctggatctattttttccatgatggtttgaagtaggactgtccgtgtgtact 459 |||||||||||||||||||||| |||| ||||||||||||| || | |||||||||| Sbjct: 768 cctgttgtgctggatctattttgtccagactggtttgaagtagtaccatgcgtgtgtact 709 Query: 460 ccgaaggaatgccattttgtatgctcatttttgccaccatttgctccagttgcttgtttt 519 | ||||||| || |||||||||||| | ||| | ||| || |||| || | |||||| | Sbjct: 708 cagaaggaaggctattttgtatgcttaatttcacaacctttcgctcaagctccttgttct 649 Query: 520 cagaaagccaagcttttgctgttagaaggtccatctgttgctttgccaacactttgtcaa 579 | |||||| ||||||||||| ||||| |||||||||||||||||||| ||||| |||| Sbjct: 648 ccataagccatgcttttgctgtgagaagatccatctgttgctttgccaatactttatcaa 589 Query: 580 gaggtatatcctttatttgttggaccttcaattcaatcgatatcttactcatgtcag 636 |||||||||||||||| |||||||| ||||||||||| ||||| | ||||||||||| Sbjct: 588 gaggtatatcctttatatgttggactttcaattcaatagatatttcactcatgtcag 532 Score = 167 bits (84), Expect = 6e-38 Identities = 140/159 (88%) Strand = Plus / Minus Query: 80 cccgccgcagcacagctccgagcagcactcgaagcagccgaggaaggagagggcagcgca 139 |||||||||||||||||| ||||||||||||||||| || ||| | | || ||| ||||| Sbjct: 1097 cccgccgcagcacagctctgagcagcactcgaagcatcccaggcacgcgatggcggcgca 1038 Query: 140 catctgcaccatgacgatggcgcactggtcgttcatnttgctgcagcagttgatgaagca 199 |||| |||||||||||||||||||||||||||| |||||||| ||||||||||| Sbjct: 1037 ggcctgcgccatgacgatggcgcactggtcgttcatcttgctgcacgccttgatgaagca 978 Query: 200 catgcagcagcagcagtccgccacgcggccgcagcagcc 238 ||||||||||||||||||||||| ||||| ||||||||| Sbjct: 977 catgcagcagcagcagtccgccatgcggctgcagcagcc 939
>dbj|AK062571.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-C06, full insert sequence Length = 1289 Score = 180 bits (91), Expect = 4e-42 Identities = 190/223 (85%) Strand = Plus / Minus Query: 414 tctattttttccatgatggtttgaagtaggactgtccgtgtgtactccgaaggaatgcca 473 ||||||||||||| || | |||||||||||| || |||||||||||||||||||||| Sbjct: 748 tctattttttccacgaagttttgaagtaggatagtgcgtgtgtactccgaaggaatgctg 689 Query: 474 ttttgtatgctcatttttgccaccatttgctccagttgcttgttttcagaaagccaagct 533 |||||||| || | |||| ||||| | ||| ||||| ||||||||| ||| ||| ||| Sbjct: 688 ttttgtatacttaattttaccaccttcatctctagttgattgttttcataaaaccatgct 629 Query: 534 tttgctgttagaaggtccatctgttgctttgccaacactttgtcaagaggtatatccttt 593 |||||||| ||||| |||||||| |||||||| |||||||||||||||| ||||||||| Sbjct: 628 tttgctgtgagaagatccatctgctgctttgctaacactttgtcaagagaaatatccttt 569 Query: 594 atttgttggaccttcaattcaatcgatatcttactcatgtcag 636 | ||||||||| |||||||||||||||| | |||||||||| Sbjct: 568 acatgttggaccctcaattcaatcgatatttcgctcatgtcag 526 Score = 157 bits (79), Expect = 6e-35 Identities = 140/160 (87%), Gaps = 3/160 (1%) Strand = Plus / Minus Query: 80 cccgccgcagcacagctccgagcagcactcgaagcagccgaggaaggagagggcagcgca 139 ||||||||||||||| ||||||||||||||||| ||||| | ||||| || |||| Sbjct: 1076 cccgccgcagcacaga---gagcagcactcgaagcatgcgaggcacgagagcgcgccgca 1020 Query: 140 catctgcaccatgacgatggcgcactggtcgttcatnttgctgcagcagttgatgaagca 199 || |||||||||||||||||||||| |||||||||| ||||||||| |||||||||||| Sbjct: 1019 cagctgcaccatgacgatggcgcaccggtcgttcatcttgctgcaggtgttgatgaagca 960 Query: 200 catgcagcagcagcagtccgccacgcggccgcagcagccg 239 |||||||||||||||||||| | ||||| |||||||||| Sbjct: 959 catgcagcagcagcagtccgtgaggcggctgcagcagccg 920
>gb|AC134886.5| Oryza sativa chromosome 3 BAC OSJNBa0002D18 genomic sequence, complete sequence Length = 145714 Score = 157 bits (79), Expect = 6e-35 Identities = 140/160 (87%), Gaps = 3/160 (1%) Strand = Plus / Minus Query: 80 cccgccgcagcacagctccgagcagcactcgaagcagccgaggaaggagagggcagcgca 139 ||||||||||||||| ||||||||||||||||| ||||| | ||||| || |||| Sbjct: 73635 cccgccgcagcacaga---gagcagcactcgaagcatgcgaggcacgagagcgcgccgca 73579 Query: 140 catctgcaccatgacgatggcgcactggtcgttcatnttgctgcagcagttgatgaagca 199 || |||||||||||||||||||||| |||||||||| ||||||||| |||||||||||| Sbjct: 73578 cagctgcaccatgacgatggcgcaccggtcgttcatcttgctgcaggtgttgatgaagca 73519 Query: 200 catgcagcagcagcagtccgccacgcggccgcagcagccg 239 |||||||||||||||||||| | ||||| |||||||||| Sbjct: 73518 catgcagcagcagcagtccgtgaggcggctgcagcagccg 73479 Score = 71.9 bits (36), Expect = 3e-09 Identities = 60/68 (88%) Strand = Plus / Minus Query: 414 tctattttttccatgatggtttgaagtaggactgtccgtgtgtactccgaaggaatgcca 473 ||||||||||||| || | |||||||||||| || |||||||||||||||||||||| Sbjct: 72585 tctattttttccacgaagttttgaagtaggatagtgcgtgtgtactccgaaggaatgctg 72526 Query: 474 ttttgtat 481 |||||||| Sbjct: 72525 ttttgtat 72518 Score = 69.9 bits (35), Expect = 1e-08 Identities = 59/67 (88%) Strand = Plus / Minus Query: 570 actttgtcaagaggtatatcctttatttgttggaccttcaattcaatcgatatcttactc 629 ||||||||||||| |||||||||| ||||||||| |||||||||||||||| | ||| Sbjct: 70928 actttgtcaagagaaatatcctttacatgttggaccctcaattcaatcgatatttcgctc 70869 Query: 630 atgtcag 636 ||||||| Sbjct: 70868 atgtcag 70862 Score = 65.9 bits (33), Expect = 2e-07 Identities = 57/65 (87%) Strand = Plus / Minus Query: 507 agttgcttgttttcagaaagccaagcttttgctgttagaaggtccatctgttgctttgcc 566 ||||| ||||||||| ||| ||| ||||||||||| ||||| |||||||| |||||||| Sbjct: 71885 agttgattgttttcataaaaccatgcttttgctgtgagaagatccatctgctgctttgct 71826 Query: 567 aacac 571 ||||| Sbjct: 71825 aacac 71821
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 157 bits (79), Expect = 6e-35 Identities = 140/160 (87%), Gaps = 3/160 (1%) Strand = Plus / Plus Query: 80 cccgccgcagcacagctccgagcagcactcgaagcagccgaggaaggagagggcagcgca 139 ||||||||||||||| ||||||||||||||||| ||||| | ||||| || |||| Sbjct: 16510698 cccgccgcagcacaga---gagcagcactcgaagcatgcgaggcacgagagcgcgccgca 16510754 Query: 140 catctgcaccatgacgatggcgcactggtcgttcatnttgctgcagcagttgatgaagca 199 || |||||||||||||||||||||| |||||||||| ||||||||| |||||||||||| Sbjct: 16510755 cagctgcaccatgacgatggcgcaccggtcgttcatcttgctgcaggtgttgatgaagca 16510814 Query: 200 catgcagcagcagcagtccgccacgcggccgcagcagccg 239 |||||||||||||||||||| | ||||| |||||||||| Sbjct: 16510815 catgcagcagcagcagtccgtgaggcggctgcagcagccg 16510854 Score = 71.9 bits (36), Expect = 3e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 414 tctattttttccatgatggtttgaagtaggactgtccgtgtgtactccgaaggaatgcca 473 ||||||||||||| || | |||||||||||| || |||||||||||||||||||||| Sbjct: 16511748 tctattttttccacgaagttttgaagtaggatagtgcgtgtgtactccgaaggaatgctg 16511807 Query: 474 ttttgtat 481 |||||||| Sbjct: 16511808 ttttgtat 16511815 Score = 69.9 bits (35), Expect = 1e-08 Identities = 59/67 (88%) Strand = Plus / Plus Query: 570 actttgtcaagaggtatatcctttatttgttggaccttcaattcaatcgatatcttactc 629 ||||||||||||| |||||||||| ||||||||| |||||||||||||||| | ||| Sbjct: 16513405 actttgtcaagagaaatatcctttacatgttggaccctcaattcaatcgatatttcgctc 16513464 Query: 630 atgtcag 636 ||||||| Sbjct: 16513465 atgtcag 16513471 Score = 65.9 bits (33), Expect = 2e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 507 agttgcttgttttcagaaagccaagcttttgctgttagaaggtccatctgttgctttgcc 566 ||||| ||||||||| ||| ||| ||||||||||| ||||| |||||||| |||||||| Sbjct: 16512448 agttgattgttttcataaaaccatgcttttgctgtgagaagatccatctgctgctttgct 16512507 Query: 567 aacac 571 ||||| Sbjct: 16512508 aacac 16512512
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 157 bits (79), Expect = 6e-35 Identities = 140/160 (87%), Gaps = 3/160 (1%) Strand = Plus / Plus Query: 80 cccgccgcagcacagctccgagcagcactcgaagcagccgaggaaggagagggcagcgca 139 ||||||||||||||| ||||||||||||||||| ||||| | ||||| || |||| Sbjct: 16504331 cccgccgcagcacaga---gagcagcactcgaagcatgcgaggcacgagagcgcgccgca 16504387 Query: 140 catctgcaccatgacgatggcgcactggtcgttcatnttgctgcagcagttgatgaagca 199 || |||||||||||||||||||||| |||||||||| ||||||||| |||||||||||| Sbjct: 16504388 cagctgcaccatgacgatggcgcaccggtcgttcatcttgctgcaggtgttgatgaagca 16504447 Query: 200 catgcagcagcagcagtccgccacgcggccgcagcagccg 239 |||||||||||||||||||| | ||||| |||||||||| Sbjct: 16504448 catgcagcagcagcagtccgtgaggcggctgcagcagccg 16504487 Score = 71.9 bits (36), Expect = 3e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 414 tctattttttccatgatggtttgaagtaggactgtccgtgtgtactccgaaggaatgcca 473 ||||||||||||| || | |||||||||||| || |||||||||||||||||||||| Sbjct: 16505381 tctattttttccacgaagttttgaagtaggatagtgcgtgtgtactccgaaggaatgctg 16505440 Query: 474 ttttgtat 481 |||||||| Sbjct: 16505441 ttttgtat 16505448 Score = 69.9 bits (35), Expect = 1e-08 Identities = 59/67 (88%) Strand = Plus / Plus Query: 570 actttgtcaagaggtatatcctttatttgttggaccttcaattcaatcgatatcttactc 629 ||||||||||||| |||||||||| ||||||||| |||||||||||||||| | ||| Sbjct: 16507038 actttgtcaagagaaatatcctttacatgttggaccctcaattcaatcgatatttcgctc 16507097 Query: 630 atgtcag 636 ||||||| Sbjct: 16507098 atgtcag 16507104 Score = 65.9 bits (33), Expect = 2e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 507 agttgcttgttttcagaaagccaagcttttgctgttagaaggtccatctgttgctttgcc 566 ||||| ||||||||| ||| ||| ||||||||||| ||||| |||||||| |||||||| Sbjct: 16506081 agttgattgttttcataaaaccatgcttttgctgtgagaagatccatctgctgctttgct 16506140 Query: 567 aacac 571 ||||| Sbjct: 16506141 aacac 16506145
>ref|XM_479151.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1362 Score = 101 bits (51), Expect = 3e-18 Identities = 125/150 (83%) Strand = Plus / Minus Query: 90 cacagctccgagcagcactcgaagcagccgaggaaggagagggcagcgcacatctgcacc 149 |||||||| | |||||||||| ||||||||||| ||| || || ||||| | |||| | Sbjct: 1041 cacagctcggcgcagcactcgtagcagccgaggcaggcgaacgccgcgcagacctgcgtc 982 Query: 150 atgacgatggcgcactggtcgttcatnttgctgcagcagttgatgaagcacatgcagcag 209 || ||||||||||||||||||||||| ||| ||||| |||||| |||||||||||||| Sbjct: 981 atcacgatggcgcactggtcgttcatcttgttgcaggccttgatgcagcacatgcagcag 922 Query: 210 cagcagtccgccacgcggccgcagcagccg 239 |||||| || | ||||| |||||||||| Sbjct: 921 aggcagtcggcgaggcggctgcagcagccg 892 Score = 89.7 bits (45), Expect = 1e-14 Identities = 165/205 (80%) Strand = Plus / Minus Query: 432 gtttgaagtaggactgtccgtgtgtactccgaaggaatgccattttgtatgctcattttt 491 |||||||||||||| | | |||||||| |||||||||| |||||| ||||| | ||| Sbjct: 696 gtttgaagtaggaccatgctcgtgtactctgaaggaatgctattttgaatgcttagtttc 637 Query: 492 gccaccatttgctccagttgcttgttttcagaaagccaagcttttgctgttagaaggtcc 551 ||||| || |||||||||||||| ||||||||| || || ||||| |||||| | Sbjct: 636 accacctttctctccagttgcttgtcagaagaaagccatgccttcgctgtgagaaggcca 577 Query: 552 atctgttgctttgccaacactttgtcaagaggtatatcctttatttgttggaccttcaat 611 ||||| || ||||| ||||||||||| |||||||||||||| || || ||||| | | Sbjct: 576 atctgctgtgccgccaaaactttgtcaaggggtatatcctttatatgctgcaccttaagt 517 Query: 612 tcaatcgatatcttactcatgtcag 636 |||||||| |||| |||||||||| Sbjct: 516 tcaatcgagatctctctcatgtcag 492
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 101 bits (51), Expect = 3e-18 Identities = 125/150 (83%) Strand = Plus / Minus Query: 90 cacagctccgagcagcactcgaagcagccgaggaaggagagggcagcgcacatctgcacc 149 |||||||| | |||||||||| ||||||||||| ||| || || ||||| | |||| | Sbjct: 25251774 cacagctcggcgcagcactcgtagcagccgaggcaggcgaacgccgcgcagacctgcgtc 25251715 Query: 150 atgacgatggcgcactggtcgttcatnttgctgcagcagttgatgaagcacatgcagcag 209 || ||||||||||||||||||||||| ||| ||||| |||||| |||||||||||||| Sbjct: 25251714 atcacgatggcgcactggtcgttcatcttgttgcaggccttgatgcagcacatgcagcag 25251655 Query: 210 cagcagtccgccacgcggccgcagcagccg 239 |||||| || | ||||| |||||||||| Sbjct: 25251654 aggcagtcggcgaggcggctgcagcagccg 25251625 Score = 61.9 bits (31), Expect = 3e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 570 actttgtcaagaggtatatcctttatttgttggaccttcaattcaatcgatatcttactc 629 ||||||||||| |||||||||||||| || || ||||| | ||||||||| |||| ||| Sbjct: 25250004 actttgtcaaggggtatatcctttatatgctgcaccttaagttcaatcgagatctctctc 25249945 Query: 630 atgtcag 636 ||||||| Sbjct: 25249944 atgtcag 25249938 Score = 42.1 bits (21), Expect = 2.3 Identities = 45/53 (84%) Strand = Plus / Minus Query: 432 gtttgaagtaggactgtccgtgtgtactccgaaggaatgccattttgtatgct 484 |||||||||||||| | | |||||||| |||||||||| |||||| ||||| Sbjct: 25251303 gtttgaagtaggaccatgctcgtgtactctgaaggaatgctattttgaatgct 25251251
>dbj|AP005198.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0616D06 Length = 153800 Score = 101 bits (51), Expect = 3e-18 Identities = 125/150 (83%) Strand = Plus / Minus Query: 90 cacagctccgagcagcactcgaagcagccgaggaaggagagggcagcgcacatctgcacc 149 |||||||| | |||||||||| ||||||||||| ||| || || ||||| | |||| | Sbjct: 68445 cacagctcggcgcagcactcgtagcagccgaggcaggcgaacgccgcgcagacctgcgtc 68386 Query: 150 atgacgatggcgcactggtcgttcatnttgctgcagcagttgatgaagcacatgcagcag 209 || ||||||||||||||||||||||| ||| ||||| |||||| |||||||||||||| Sbjct: 68385 atcacgatggcgcactggtcgttcatcttgttgcaggccttgatgcagcacatgcagcag 68326 Query: 210 cagcagtccgccacgcggccgcagcagccg 239 |||||| || | ||||| |||||||||| Sbjct: 68325 aggcagtcggcgaggcggctgcagcagccg 68296 Score = 61.9 bits (31), Expect = 3e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 570 actttgtcaagaggtatatcctttatttgttggaccttcaattcaatcgatatcttactc 629 ||||||||||| |||||||||||||| || || ||||| | ||||||||| |||| ||| Sbjct: 66675 actttgtcaaggggtatatcctttatatgctgcaccttaagttcaatcgagatctctctc 66616 Query: 630 atgtcag 636 ||||||| Sbjct: 66615 atgtcag 66609 Score = 42.1 bits (21), Expect = 2.3 Identities = 45/53 (84%) Strand = Plus / Minus Query: 432 gtttgaagtaggactgtccgtgtgtactccgaaggaatgccattttgtatgct 484 |||||||||||||| | | |||||||| |||||||||| |||||| ||||| Sbjct: 67974 gtttgaagtaggaccatgctcgtgtactctgaaggaatgctattttgaatgct 67922
>dbj|AK111336.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-181-F03, full insert sequence Length = 1362 Score = 101 bits (51), Expect = 3e-18 Identities = 125/150 (83%) Strand = Plus / Minus Query: 90 cacagctccgagcagcactcgaagcagccgaggaaggagagggcagcgcacatctgcacc 149 |||||||| | |||||||||| ||||||||||| ||| || || ||||| | |||| | Sbjct: 1041 cacagctcggcgcagcactcgtagcagccgaggcaggcgaacgccgcgcagacctgcgtc 982 Query: 150 atgacgatggcgcactggtcgttcatnttgctgcagcagttgatgaagcacatgcagcag 209 || ||||||||||||||||||||||| ||| ||||| |||||| |||||||||||||| Sbjct: 981 atcacgatggcgcactggtcgttcatcttgttgcaggccttgatgcagcacatgcagcag 922 Query: 210 cagcagtccgccacgcggccgcagcagccg 239 |||||| || | ||||| |||||||||| Sbjct: 921 aggcagtcggcgaggcggctgcagcagccg 892 Score = 89.7 bits (45), Expect = 1e-14 Identities = 165/205 (80%) Strand = Plus / Minus Query: 432 gtttgaagtaggactgtccgtgtgtactccgaaggaatgccattttgtatgctcattttt 491 |||||||||||||| | | |||||||| |||||||||| |||||| ||||| | ||| Sbjct: 696 gtttgaagtaggaccatgctcgtgtactctgaaggaatgctattttgaatgcttagtttc 637 Query: 492 gccaccatttgctccagttgcttgttttcagaaagccaagcttttgctgttagaaggtcc 551 ||||| || |||||||||||||| ||||||||| || || ||||| |||||| | Sbjct: 636 accacctttctctccagttgcttgtcagaagaaagccatgccttcgctgtgagaaggcca 577 Query: 552 atctgttgctttgccaacactttgtcaagaggtatatcctttatttgttggaccttcaat 611 ||||| || ||||| ||||||||||| |||||||||||||| || || ||||| | | Sbjct: 576 atctgctgtgccgccaaaactttgtcaaggggtatatcctttatatgctgcaccttaagt 517 Query: 612 tcaatcgatatcttactcatgtcag 636 |||||||| |||| |||||||||| Sbjct: 516 tcaatcgagatctctctcatgtcag 492
>emb|AL391989.9| Human DNA sequence from clone RP11-388E20 on chromosome 13 Contains a ribosomal protein L31 (RPL31) pseudogene, complete sequence Length = 167496 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Plus Query: 371 ctcctctggtttctttggtttctgttttc 399 ||||||||||||||||| ||||||||||| Sbjct: 100521 ctcctctggtttctttgctttctgttttc 100549
>dbj|AB055861.1| Procambarus clarkii I-con mRNA for I-connectin, complete cds Length = 53424 Score = 48.1 bits (24), Expect = 0.038 Identities = 24/24 (100%) Strand = Plus / Minus Query: 368 aggctcctctggtttctttggttt 391 |||||||||||||||||||||||| Sbjct: 46576 aggctcctctggtttctttggttt 46553
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 218 cgccacgcggccgcagcagccgc 240 ||||||||||||||||||||||| Sbjct: 4463145 cgccacgcggccgcagcagccgc 4463123
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 218 cgccacgcggccgcagcagccgc 240 ||||||||||||||||||||||| Sbjct: 4463126 cgccacgcggccgcagcagccgc 4463104
>emb|AL954157.3|CNS08CCV Oryza sativa chromosome 12, . BAC OSJNBa0042N11 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 168699 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 218 cgccacgcggccgcagcagccgc 240 ||||||||||||||||||||||| Sbjct: 41351 cgccacgcggccgcagcagccgc 41373
>gb|AC010573.4| Drosophila melanogaster 3L BAC RP98-2M13 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 181927 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 224 gcggccgcagcagccgcccacc 245 |||||||||||||||||||||| Sbjct: 52682 gcggccgcagcagccgcccacc 52661
>ref|NM_140438.2| Drosophila melanogaster Sox21b CG32139-RA (Sox21b), mRNA Length = 2670 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 224 gcggccgcagcagccgcccacc 245 |||||||||||||||||||||| Sbjct: 893 gcggccgcagcagccgcccacc 914
>gb|AY058313.1| Drosophila melanogaster GH07353 full length cDNA Length = 2669 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 224 gcggccgcagcagccgcccacc 245 |||||||||||||||||||||| Sbjct: 893 gcggccgcagcagccgcccacc 914
>gb|AE003535.3| Drosophila melanogaster chromosome 3L, section 50 of 83 of the complete sequence Length = 278708 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 224 gcggccgcagcagccgcccacc 245 |||||||||||||||||||||| Sbjct: 35279 gcggccgcagcagccgcccacc 35258
>ref|XM_417492.1| PREDICTED: Gallus gallus similar to chromosome 20 open reading frame 86 (LOC419320), mRNA Length = 804 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 134 agcgcacatctgcaccatgac 154 ||||||||||||||||||||| Sbjct: 547 agcgcacatctgcaccatgac 527
>ref|XM_532514.2| PREDICTED: Canis familiaris similar to dpy-19-like 1, like (LOC475282), mRNA Length = 2330 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 34 acaacacaccacgcctcttct 54 ||||||||||||||||||||| Sbjct: 2045 acaacacaccacgcctcttct 2025
>gb|AY424657.1| Mirounga leonina sex determining region Y protein (SRY) gene, complete cds Length = 1234 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 428 gatggtttgaagtaggactgtccgt 452 |||||||||| |||||||||||||| Sbjct: 524 gatggtttgaggtaggactgtccgt 500
>gb|AY424656.1| Mirounga angustirostris sex determining region Y protein (SRY) gene, complete cds Length = 1235 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 428 gatggtttgaagtaggactgtccgt 452 |||||||||| |||||||||||||| Sbjct: 525 gatggtttgaggtaggactgtccgt 501
>emb|AL445645.10| Human DNA sequence from clone RP11-295G24 on chromosome 9 Contains the TSC1 gene for tuberous sclerosis 1, the C9orf9 gene for chromosome 9 open reading frame 9 protein, the 5' end of gene FLJ32704, two novel gene, the 5' end of a novel gene and three CpG islands, complete sequence Length = 199113 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 483 ctcatttttgccaccatttgc 503 ||||||||||||||||||||| Sbjct: 35688 ctcatttttgccaccatttgc 35708
>dbj|AP008934.1| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 DNA, complete genome Length = 2516575 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 182 gcagcagttgatgaagcacat 202 ||||||||||||||||||||| Sbjct: 1693573 gcagcagttgatgaagcacat 1693553
>gb|AC171011.2| Gallus gallus BAC clone CH261-112C5 from chromosome ul, complete sequence Length = 230767 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 380 tttctttggtttctgttttcc 400 ||||||||||||||||||||| Sbjct: 182352 tttctttggtttctgttttcc 182372
>emb|AL136296.3|CNS01DW0 Human chromosome 14 DNA sequence BAC R-588D7 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 192404 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 375 tctggtttctttggtttctgttttc 399 |||||||||||| |||||||||||| Sbjct: 96438 tctggtttcttttgtttctgttttc 96414
>gb|AC000392.1|AC000392 Genomic sequence from Human 9q34, complete sequence Length = 44266 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 483 ctcatttttgccaccatttgc 503 ||||||||||||||||||||| Sbjct: 33688 ctcatttttgccaccatttgc 33668
>ref|NM_112018.3| Arabidopsis thaliana unknown protein AT3G11850 transcript variant AT3G11850.1 mRNA, complete cds Length = 1976 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 ctgcagcagttgatgaagca 199 |||||||||||||||||||| Sbjct: 419 ctgcagcagttgatgaagca 400
>ref|NM_202560.1| Arabidopsis thaliana unknown protein AT3G11850 transcript variant AT3G11850.2 mRNA, complete cds Length = 2360 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 ctgcagcagttgatgaagca 199 |||||||||||||||||||| Sbjct: 803 ctgcagcagttgatgaagca 784
>gb|AC154483.2| Mus musculus BAC clone RP24-113B3 from chromosome 17, complete sequence Length = 182923 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 229 cgcagcagccgcccaccgcc 248 |||||||||||||||||||| Sbjct: 51696 cgcagcagccgcccaccgcc 51677
>gb|AE008427.1| Streptococcus pneumoniae R6 section 43 of 184 of the complete genome Length = 10940 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 417 attttttccatgatggtttg 436 |||||||||||||||||||| Sbjct: 4752 attttttccatgatggtttg 4733
>gb|CP000067.1| Trypanosoma brucei chromosome 4, complete sequence Length = 1590432 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 agcacatgcagcagcagcag 215 |||||||||||||||||||| Sbjct: 1345018 agcacatgcagcagcagcag 1344999
>gb|AC079815.9| Trypanosoma brucei chromosome 4 clone RPCI93-3M17, complete sequence Length = 144365 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 agcacatgcagcagcagcag 215 |||||||||||||||||||| Sbjct: 22905 agcacatgcagcagcagcag 22886
>gb|AC006776.1| Caenorhabditis elegans cosmid Y46H3C, complete sequence Length = 32263 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 375 tctggtttctttggtttctgtttt 398 |||||||||| ||||||||||||| Sbjct: 29185 tctggtttctgtggtttctgtttt 29208
>gb|BC013341.1| Mus musculus arginase 1, liver, mRNA (cDNA clone MGC:13983 IMAGE:4163626), complete cds Length = 1453 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 agcacatgcagcagcagcag 215 |||||||||||||||||||| Sbjct: 39 agcacatgcagcagcagcag 58
>ref|NM_007482.2| Mus musculus arginase 1, liver (Arg1), mRNA Length = 1453 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 agcacatgcagcagcagcag 215 |||||||||||||||||||| Sbjct: 39 agcacatgcagcagcagcag 58
>gb|AC159502.12| Mus musculus 10 BAC RP23-113B7 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 226276 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 agcacatgcagcagcagcag 215 |||||||||||||||||||| Sbjct: 196633 agcacatgcagcagcagcag 196614
>ref|XR_003217.1| PREDICTED: Mus musculus similar to nuclease sensitive element binding protein 1 (LOC624960), mRNA Length = 1203 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 229 cgcagcagccgcccaccgcc 248 |||||||||||||||||||| Sbjct: 20 cgcagcagccgcccaccgcc 39
>ref|XM_821350.1| Trypanosoma brucei TREU927 clone RPCI93-3M17 3,2-trans-enoyl-CoA isomerase (Tb927.4.4910) partial mRNA Length = 1203 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 agcacatgcagcagcagcag 215 |||||||||||||||||||| Sbjct: 296 agcacatgcagcagcagcag 315
>gb|AC016795.6|ATAC016795 Arabidopsis thaliana chromosome III BAC F26K24 genomic sequence, complete sequence Length = 100835 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 ctgcagcagttgatgaagca 199 |||||||||||||||||||| Sbjct: 41349 ctgcagcagttgatgaagca 41368
>gb|AC129213.4| Mus musculus BAC clone RP24-391M2 from chromosome 6, complete sequence Length = 154613 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 tttctttggtttctgttttc 399 |||||||||||||||||||| Sbjct: 21820 tttctttggtttctgttttc 21801
>gb|AC083946.5| Mus musculus strain C57BL6/J chromosome 6 clone RP23-132J21, complete sequence Length = 200910 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 tttctttggtttctgttttc 399 |||||||||||||||||||| Sbjct: 111385 tttctttggtttctgttttc 111366
>emb|CR712181.2|CNS0GCGX Tetraodon nigroviridis full-length cDNA Length = 483 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 agcacatgcagcagcagcag 215 |||||||||||||||||||| Sbjct: 44 agcacatgcagcagcagcag 25
>gb|AC157319.2| Zea mays clone ZMMBBb-136E2, complete sequence Length = 138186 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 369 ggctcctctggtttctttggtttc 392 |||||||||||||| ||||||||| Sbjct: 131401 ggctcctctggtttgtttggtttc 131378
>emb|AL713859.9| Human DNA sequence from clone RP11-242B9 on chromosome 1 Contains part of a novel gene (FLJ10986), complete sequence Length = 105393 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 379 gtttctttggtttctgtttt 398 |||||||||||||||||||| Sbjct: 37642 gtttctttggtttctgtttt 37661
>emb|AL390878.6| Human DNA sequence from clone RP11-442F12 on chromosome 13 Contains part of the DIAPH3 gene for diaphanous homolog 3 (Drosophila) and a novel gene, complete sequence Length = 209794 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 377 tggtttctttggtttctgtt 396 |||||||||||||||||||| Sbjct: 117305 tggtttctttggtttctgtt 117286
>emb|AL358178.14| Human DNA sequence from clone RP11-812I20 on chromosome 6 Contains part of the gene for CD2-associated protein and a 40S ribosomal protein S12 (RPS12) pseudogene, complete sequence Length = 77432 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 377 tggtttctttggtttctgtt 396 |||||||||||||||||||| Sbjct: 33899 tggtttctttggtttctgtt 33880
>gb|AC098697.4| Rattus norvegicus strain Brown Norway clone RP31-387A21, complete sequence Length = 123000 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 375 tctggtttctttggtttctg 394 |||||||||||||||||||| Sbjct: 8908 tctggtttctttggtttctg 8927
>ref|XM_781860.1| PREDICTED: Strongylocentrotus purpuratus similar to methyl-CpG binding domain protein 5 (LOC581882), mRNA Length = 5256 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 agcacatgcagcagcagcag 215 |||||||||||||||||||| Sbjct: 641 agcacatgcagcagcagcag 660
>emb|BX049137.1|CNS09A2T Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC24DD10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 693 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 agcacatgcagcagcagcag 215 |||||||||||||||||||| Sbjct: 360 agcacatgcagcagcagcag 341
>emb|BX024349.1|CNS08QY9 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA37AE08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 875 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 agcacatgcagcagcagcag 215 |||||||||||||||||||| Sbjct: 292 agcacatgcagcagcagcag 273
>emb|BX024348.1|CNS08QY8 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA37AE08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 962 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 agcacatgcagcagcagcag 215 |||||||||||||||||||| Sbjct: 930 agcacatgcagcagcagcag 949
>emb|BX008180.1|CNS08EH4 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA13CB07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 980 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 agcacatgcagcagcagcag 215 |||||||||||||||||||| Sbjct: 917 agcacatgcagcagcagcag 936
>emb|BX006263.1|CNS08CZV Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA10CE12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 920 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 agcacatgcagcagcagcag 215 |||||||||||||||||||| Sbjct: 222 agcacatgcagcagcagcag 203
>emb|X79340.1|DMMSIDNA Drosophila melanogaster musashi gene Length = 3790 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 222 acgcggccgcagcagccgcc 241 |||||||||||||||||||| Sbjct: 1927 acgcggccgcagcagccgcc 1946
>emb|X79339.1|DMMUSASH D.melanogaster musashi mRNA Length = 3736 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 222 acgcggccgcagcagccgcc 241 |||||||||||||||||||| Sbjct: 376 acgcggccgcagcagccgcc 395
>gb|AY129338.1| Mycobacteriophage Omega, complete sequence Length = 110865 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 114 cagccgaggaaggagagggcagcg 137 ||||||||| |||||||||||||| Sbjct: 58897 cagccgaggcaggagagggcagcg 58920
>emb|AL939117.1|SCO939117 Streptomyces coelicolor A3(2) complete genome; segment 14/29 Length = 309050 Score = 40.1 bits (20), Expect = 9.2 Identities = 32/36 (88%) Strand = Plus / Minus Query: 204 cagcagcagcagtccgccacgcggccgcagcagccg 239 ||||||||||||| |||| ||| |||||||||||| Sbjct: 261555 cagcagcagcagtacgccccgcccccgcagcagccg 261520
>gb|AY128893.1| Arabidopsis thaliana unknown protein (At3g11850) mRNA, complete cds Length = 1687 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 ctgcagcagttgatgaagca 199 |||||||||||||||||||| Sbjct: 283 ctgcagcagttgatgaagca 264
>gb|AY119171.1| Drosophila melanogaster RH49436 full insert cDNA Length = 2822 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 222 acgcggccgcagcagccgcc 241 |||||||||||||||||||| Sbjct: 721 acgcggccgcagcagccgcc 740
>dbj|AK091776.1| Homo sapiens cDNA FLJ34457 fis, clone HLUNG2002707 Length = 2189 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 466 gaatgccattttgtatgctcattt 489 ||||||||||||||||| |||||| Sbjct: 28 gaatgccattttgtatggtcattt 5
>gb|AY099765.1| Arabidopsis thaliana unknown protein (At3g11850) mRNA, complete cds Length = 1922 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 ctgcagcagttgatgaagca 199 |||||||||||||||||||| Sbjct: 418 ctgcagcagttgatgaagca 399
>ref|NM_170229.2| Drosophila melanogaster musashi CG5099-RB, transcript variant B (msi), mRNA Length = 4091 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 222 acgcggccgcagcagccgcc 241 |||||||||||||||||||| Sbjct: 721 acgcggccgcagcagccgcc 740
>ref|NM_165844.1| Drosophila melanogaster toutatis CG10897-RB, transcript variant B (tou), mRNA Length = 2926 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 agcacatgcagcagcagcag 215 |||||||||||||||||||| Sbjct: 862 agcacatgcagcagcagcag 881
>ref|NM_165843.1| Drosophila melanogaster toutatis CG10897-RD, transcript variant D (tou), mRNA Length = 2840 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 agcacatgcagcagcagcag 215 |||||||||||||||||||| Sbjct: 862 agcacatgcagcagcagcag 881
>ref|NM_165842.1| Drosophila melanogaster toutatis CG10897-RC, transcript variant C (tou), mRNA Length = 3067 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 agcacatgcagcagcagcag 215 |||||||||||||||||||| Sbjct: 1089 agcacatgcagcagcagcag 1108
>ref|NM_143353.1| Drosophila melanogaster CG12425-RA (CG12425), mRNA Length = 924 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 gcggccgcagcagccgccca 243 |||||||||||||||||||| Sbjct: 637 gcggccgcagcagccgccca 656
>ref|NM_079838.2| Drosophila melanogaster musashi CG5099-RA, transcript variant A (msi), mRNA Length = 3946 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 222 acgcggccgcagcagccgcc 241 |||||||||||||||||||| Sbjct: 576 acgcggccgcagcagccgcc 595
>ref|NM_078977.2| Drosophila melanogaster toutatis CG10897-RA, transcript variant A (tou), mRNA Length = 10497 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 agcacatgcagcagcagcag 215 |||||||||||||||||||| Sbjct: 8519 agcacatgcagcagcagcag 8538
>dbj|AK135257.1| Mus musculus 12 days embryo male wolffian duct includes surrounding region cDNA, RIKEN full-length enriched library, clone:6720448E24 product:unclassifiable, full insert sequence Length = 2121 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 agcacatgcagcagcagcag 215 |||||||||||||||||||| Sbjct: 1913 agcacatgcagcagcagcag 1894
>gb|BC114311.1| Danio rerio cDNA clone IMAGE:7995366, partial cds Length = 1457 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 tgctgcagcagttgatgaag 197 |||||||||||||||||||| Sbjct: 282 tgctgcagcagttgatgaag 263
>dbj|AK149471.1| Mus musculus adult male liver tumor cDNA, RIKEN full-length enriched library, clone:C730019N20 product:arginase 1, liver, full insert sequence Length = 1457 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 agcacatgcagcagcagcag 215 |||||||||||||||||||| Sbjct: 45 agcacatgcagcagcagcag 64
>gb|AY060335.1| Drosophila melanogaster GH22615 full length cDNA Length = 2311 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 agcacatgcagcagcagcag 215 |||||||||||||||||||| Sbjct: 862 agcacatgcagcagcagcag 881
>emb|AL844155.6| Mouse DNA sequence from clone RP23-163L4 on chromosome 2, complete sequence Length = 193188 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 tttctttggtttctgttttc 399 |||||||||||||||||||| Sbjct: 105997 tttctttggtttctgttttc 106016
>gb|AY052047.1| Drosophila melanogaster LP06732 full length cDNA Length = 3087 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 agcacatgcagcagcagcag 215 |||||||||||||||||||| Sbjct: 1089 agcacatgcagcagcagcag 1108
>gb|AY051802.1| Drosophila melanogaster LD31631 full length cDNA Length = 2679 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 222 acgcggccgcagcagccgcc 241 |||||||||||||||||||| Sbjct: 576 acgcggccgcagcagccgcc 595
>gb|AF314193.1| Drosophila melanogaster Toutatis (tou) gene, complete cds Length = 39574 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 agcacatgcagcagcagcag 215 |||||||||||||||||||| Sbjct: 36407 agcacatgcagcagcagcag 36426
>gb|AY074884.1|AY074883S2 Mus musculus arginase I gene, proximal promoter region, exon 1 and partial cds Length = 245 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 agcacatgcagcagcagcag 215 |||||||||||||||||||| Sbjct: 148 agcacatgcagcagcagcag 167
>gb|AC007819.8|AC007819 Drosophila melanogaster, chromosome 3R, region 98C-98C, BAC clone BACR06K21, complete sequence Length = 189649 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 gcggccgcagcagccgccca 243 |||||||||||||||||||| Sbjct: 64033 gcggccgcagcagccgccca 64052
>gb|AC007473.10|AC007473 Drosophila melanogaster, chromosome 2R, region 48A-48B, BAC clone BACR38D12, complete sequence Length = 171831 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 agcacatgcagcagcagcag 215 |||||||||||||||||||| Sbjct: 37597 agcacatgcagcagcagcag 37578
>gb|AC007946.6|AC007946 Drosophila melanogaster, chromosome 3R, region 96E-96F, BAC clone BACR03O03, complete sequence Length = 132168 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 222 acgcggccgcagcagccgcc 241 |||||||||||||||||||| Sbjct: 111478 acgcggccgcagcagccgcc 111497
>gb|AC010579.9|AC010579 Drosophila melanogaster, chromosome 3R, region 96F-96F, BAC clone BACR09D08, complete sequence Length = 167396 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 222 acgcggccgcagcagccgcc 241 |||||||||||||||||||| Sbjct: 26723 acgcggccgcagcagccgcc 26742
>gb|AC137484.2| Rattus Norvegicus Strain BN/SsNHsd/MCW BAC, CH230-349A03, complete sequence Length = 164897 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 371 ctcctctggtttctttggtt 390 |||||||||||||||||||| Sbjct: 30800 ctcctctggtttctttggtt 30781
>gb|AE005672.2| Streptococcus pneumoniae TIGR4, complete genome Length = 2160842 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 417 attttttccatgatggtttg 436 |||||||||||||||||||| Sbjct: 521716 attttttccatgatggtttg 521697
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 ctgcaccatgacgatggcgc 162 |||||||||||||||||||| Sbjct: 1668290 ctgcaccatgacgatggcgc 1668309
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 9.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 209 gcagcagtccgccacgcggccgcagcag 236 ||||||| | |||||||||||||||||| Sbjct: 2092793 gcagcaggcggccacgcggccgcagcag 2092820
>ref|XM_317381.2| Anopheles gambiae str. PEST ENSANGP00000011651 (ENSANGG00000009162), mRNA Length = 939 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 agcacatgcagcagcagcag 215 |||||||||||||||||||| Sbjct: 909 agcacatgcagcagcagcag 928
>gb|U51805.1|MMU51805 Mus musculus arginase mRNA, complete cds Length = 1221 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 agcacatgcagcagcagcag 215 |||||||||||||||||||| Sbjct: 101 agcacatgcagcagcagcag 120
>emb|AJ937740.1| Streptomyces ambofaciens ATCC 23877 left terminal inverted repeat Length = 273746 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 210 cagcagtccgccacgcggcc 229 |||||||||||||||||||| Sbjct: 255161 cagcagtccgccacgcggcc 255180
>gb|AE003764.3| Drosophila melanogaster chromosome 3R, section 102 of 118 of the complete sequence Length = 231455 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 gcggccgcagcagccgccca 243 |||||||||||||||||||| Sbjct: 49510 gcggccgcagcagccgccca 49529
>gb|AE003752.2| Drosophila melanogaster chromosome 3R, section 90 of 118 of the complete sequence Length = 188285 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 222 acgcggccgcagcagccgcc 241 |||||||||||||||||||| Sbjct: 121992 acgcggccgcagcagccgcc 122011
>gb|AE003825.3| Drosophila melanogaster chromosome 2R, section 25 of 73 of the complete sequence Length = 261690 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 agcacatgcagcagcagcag 215 |||||||||||||||||||| Sbjct: 115770 agcacatgcagcagcagcag 115751
>gb|AC129321.5| Mus musculus BAC clone RP24-160I20 from 8, complete sequence Length = 198439 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 agcacatgcagcagcagcag 215 |||||||||||||||||||| Sbjct: 105919 agcacatgcagcagcagcag 105938
>emb|AL773598.5| Zebrafish DNA sequence from clone CH211-207G4, complete sequence Length = 209875 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 gaagcagccgaggaaggaga 129 |||||||||||||||||||| Sbjct: 155779 gaagcagccgaggaaggaga 155798
>emb|CT009755.8| Mouse DNA sequence from clone RP23-50F19 on chromosome 17, complete sequence Length = 215207 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 229 cgcagcagccgcccaccgcc 248 |||||||||||||||||||| Sbjct: 7467 cgcagcagccgcccaccgcc 7486
>emb|AL731820.14| Mouse DNA sequence from clone RP23-135H19 on chromosome X, complete sequence Length = 168773 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 383 ctttggtttctgttttccct 402 |||||||||||||||||||| Sbjct: 122905 ctttggtttctgttttccct 122924 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,398,120 Number of Sequences: 3902068 Number of extensions: 6398120 Number of successful extensions: 149896 Number of sequences better than 10.0: 96 Number of HSP's better than 10.0 without gapping: 96 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 149291 Number of HSP's gapped (non-prelim): 595 length of query: 673 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 650 effective length of database: 17,143,297,704 effective search space: 11143143507600 effective search space used: 11143143507600 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)