ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags11k01 |
|---|---|
| Clone Library Name | barley_pub |
>PSD6_ORYSA (Q8W425) 26S proteasome non-ATPase regulatory subunit 6 (26S| proteasome regulatory particle non-ATPase subunit 7) (OsRPN7) Length = 389 Score = 142 bits (357), Expect(2) = 3e-59 Identities = 73/82 (89%), Positives = 75/82 (91%) Frame = -2 Query: 472 FWSHTRSVTMEAMASAFGVTVDFIDQELSRFIAAGKLHCKIDKVAGVLETNRPDERNAFY 293 F +SVTMEAMASAFGVTVDFID ELSRFIAAGKLHCKIDKVA VLETNRPD RNAFY Sbjct: 307 FLESYKSVTMEAMASAFGVTVDFIDLELSRFIAAGKLHCKIDKVACVLETNRPDARNAFY 366 Query: 292 QSTIKQGDFLLNRIQKLSRVID 227 Q+TIKQGDFLLNRIQKLSRVID Sbjct: 367 QATIKQGDFLLNRIQKLSRVID 388 Score = 106 bits (265), Expect(2) = 3e-59 Identities = 50/54 (92%), Positives = 50/54 (92%) Frame = -1 Query: 617 FLTPLYNCQYKSFFVAFSGLMEQIKLDRYLQPHFRYYMREVRTVVYSQFLESYK 456 FL LYNCQYKSFF AFSGL EQIKLDRYLQPHFRYYMREVRTVVYSQFLESYK Sbjct: 259 FLNSLYNCQYKSFFAAFSGLTEQIKLDRYLQPHFRYYMREVRTVVYSQFLESYK 312
>PSD6_ARATH (Q93Y35) Probable 26S proteasome non-ATPase regulatory subunit 6| Length = 387 Score = 140 bits (352), Expect(2) = 3e-54 Identities = 70/82 (85%), Positives = 75/82 (91%) Frame = -2 Query: 472 FWSHTRSVTMEAMASAFGVTVDFIDQELSRFIAAGKLHCKIDKVAGVLETNRPDERNAFY 293 F +SVT+EAMA AFGV+VDFIDQELSRFIAAGKLHCKIDKVAGVLETNRPD +NA Y Sbjct: 305 FLESYKSVTVEAMAKAFGVSVDFIDQELSRFIAAGKLHCKIDKVAGVLETNRPDAKNALY 364 Query: 292 QSTIKQGDFLLNRIQKLSRVID 227 Q+TIKQGDFLLNRIQKLSRVID Sbjct: 365 QATIKQGDFLLNRIQKLSRVID 386 Score = 92.0 bits (227), Expect(2) = 3e-54 Identities = 42/54 (77%), Positives = 46/54 (85%) Frame = -1 Query: 617 FLTPLYNCQYKSFFVAFSGLMEQIKLDRYLQPHFRYYMREVRTVVYSQFLESYK 456 FL LY CQYK+FF AF+G+ QIK DRYL PHFR+YMREVRTVVYSQFLESYK Sbjct: 257 FLNSLYECQYKAFFSAFAGMAVQIKYDRYLYPHFRFYMREVRTVVYSQFLESYK 310
>PSD6_DROME (Q9V3G7) 26S proteasome non-ATPase regulatory subunit 6 (26S| proteasome regulatory subunit S10) (Rpn7 protein) Length = 389 Score = 116 bits (290), Expect(2) = 1e-40 Identities = 54/77 (70%), Positives = 69/77 (89%) Frame = -2 Query: 457 RSVTMEAMASAFGVTVDFIDQELSRFIAAGKLHCKIDKVAGVLETNRPDERNAFYQSTIK 278 RS+T++ MA +FGVTV++IDQEL+RFIAAG+LH K+D+V G++ETNRPD +N YQ+TIK Sbjct: 312 RSLTLQYMAESFGVTVEYIDQELARFIAAGRLHAKVDRVGGIVETNRPDNKNWQYQATIK 371 Query: 277 QGDFLLNRIQKLSRVID 227 QGD LLNRIQKLSRVI+ Sbjct: 372 QGDLLLNRIQKLSRVIN 388 Score = 70.1 bits (170), Expect(2) = 1e-40 Identities = 28/56 (50%), Positives = 44/56 (78%) Frame = -1 Query: 623 QSFLTPLYNCQYKSFFVAFSGLMEQIKLDRYLQPHFRYYMREVRTVVYSQFLESYK 456 + FL LYNCQY++F+V +G+ +Q++LD + PH+RYY+RE+R + Y+Q LESY+ Sbjct: 257 KQFLFSLYNCQYENFYVHLAGVEKQLRLDYLIHPHYRYYVREMRILGYTQLLESYR 312
>PSD6_MOUSE (Q99JI4) 26S proteasome non-ATPase regulatory subunit 6 (26S| proteasome regulatory subunit S10) (p42A) Length = 389 Score = 115 bits (289), Expect(2) = 2e-36 Identities = 57/77 (74%), Positives = 66/77 (85%) Frame = -2 Query: 457 RSVTMEAMASAFGVTVDFIDQELSRFIAAGKLHCKIDKVAGVLETNRPDERNAFYQSTIK 278 RS+T+ MA AFGV VDFIDQELSRFIAAG+LHCKIDKV ++ETNRPD +N YQ TIK Sbjct: 312 RSLTLGYMAEAFGVGVDFIDQELSRFIAAGRLHCKIDKVNEIVETNRPDSKNWQYQETIK 371 Query: 277 QGDFLLNRIQKLSRVID 227 +GD LLNR+QKLSRVI+ Sbjct: 372 KGDLLLNRVQKLSRVIN 388 Score = 56.6 bits (135), Expect(2) = 2e-36 Identities = 24/56 (42%), Positives = 37/56 (66%) Frame = -1 Query: 623 QSFLTPLYNCQYKSFFVAFSGLMEQIKLDRYLQPHFRYYMREVRTVVYSQFLESYK 456 + +L LY C+Y FF + + + +++K D PH+RYY+RE+R YSQ LESY+ Sbjct: 257 RQYLFSLYECRYSVFFQSLAIVEQEMKKDWLFAPHYRYYVREMRIHAYSQLLESYR 312
>PSD6_HUMAN (Q15008) 26S proteasome non-ATPase regulatory subunit 6 (26S| proteasome regulatory subunit S10) (p42A) (Proteasome regulatory particle subunit p44S10) (Phosphonoformate immuno-associated protein 4) (Breast cancer-associated protein SGA-113M) Length = 389 Score = 114 bits (285), Expect(2) = 4e-36 Identities = 56/77 (72%), Positives = 66/77 (85%) Frame = -2 Query: 457 RSVTMEAMASAFGVTVDFIDQELSRFIAAGKLHCKIDKVAGVLETNRPDERNAFYQSTIK 278 RS+T+ MA AFGV V+FIDQELSRFIAAG+LHCKIDKV ++ETNRPD +N YQ TIK Sbjct: 312 RSLTLGYMAEAFGVGVEFIDQELSRFIAAGRLHCKIDKVNEIVETNRPDSKNWQYQETIK 371 Query: 277 QGDFLLNRIQKLSRVID 227 +GD LLNR+QKLSRVI+ Sbjct: 372 KGDLLLNRVQKLSRVIN 388 Score = 57.0 bits (136), Expect(2) = 4e-36 Identities = 24/56 (42%), Positives = 37/56 (66%) Frame = -1 Query: 623 QSFLTPLYNCQYKSFFVAFSGLMEQIKLDRYLQPHFRYYMREVRTVVYSQFLESYK 456 + +L LY C+Y FF + + + +++K D PH+RYY+RE+R YSQ LESY+ Sbjct: 257 RQYLFSLYECRYSVFFQSLAVVEQEMKKDWLFAPHYRYYVREMRIHAYSQLLESYR 312
>PSD6_CAEEL (Q20585) 26S proteasome non-ATPase regulatory subunit 6 (26S| proteasome regulatory subunit rpn-7) Length = 410 Score = 87.0 bits (214), Expect(2) = 6e-28 Identities = 43/82 (52%), Positives = 58/82 (70%) Frame = -2 Query: 472 FWSHTRSVTMEAMASAFGVTVDFIDQELSRFIAAGKLHCKIDKVAGVLETNRPDERNAFY 293 F + ++V ++ MA FGV+ FID+EL R IA G+L C+ID V GV+E N D +N Y Sbjct: 328 FLTPYKTVRIDMMAKDFGVSRAFIDRELHRLIATGQLQCRIDAVNGVIEVNHRDSKNHLY 387 Query: 292 QSTIKQGDFLLNRIQKLSRVID 227 ++ IK GD LLNRIQKL+RVI+ Sbjct: 388 KAVIKDGDILLNRIQKLARVIN 409 Score = 57.0 bits (136), Expect(2) = 6e-28 Identities = 26/57 (45%), Positives = 33/57 (57%), Gaps = 1/57 (1%) Frame = -1 Query: 623 QSFLTPLYNCQYKSFFVAFSGL-MEQIKLDRYLQPHFRYYMREVRTVVYSQFLESYK 456 + +L Y+C Y FF+ + L E+ K DRYL PHF YY R +R Y QFL YK Sbjct: 277 REYLESYYDCHYDRFFIQLAALESERFKFDRYLSPHFNYYSRGMRHRAYEQFLTPYK 333
>RPN7_SCHPO (Q10335) Probable 26S proteasome regulatory subunit rpn7| Length = 409 Score = 89.0 bits (219), Expect(2) = 1e-26 Identities = 39/76 (51%), Positives = 60/76 (78%) Frame = -2 Query: 457 RSVTMEAMASAFGVTVDFIDQELSRFIAAGKLHCKIDKVAGVLETNRPDERNAFYQSTIK 278 R++++++MA++FGV+VD+ID++L+ FI KL+C ID+V GV+ TNRPDE+N YQ +K Sbjct: 327 RALSIDSMAASFGVSVDYIDRDLASFIPDNKLNCVIDRVNGVVFTNRPDEKNRQYQEVVK 386 Query: 277 QGDFLLNRIQKLSRVI 230 QGD LLN++QK + Sbjct: 387 QGDVLLNKLQKYQATV 402 Score = 50.8 bits (120), Expect(2) = 1e-26 Identities = 22/57 (38%), Positives = 36/57 (63%), Gaps = 1/57 (1%) Frame = -1 Query: 623 QSFLTPLYNCQYKSFFVAFSGL-MEQIKLDRYLQPHFRYYMREVRTVVYSQFLESYK 456 ++ + LY C Y FF + + + +K D++L H+RYY+RE+R Y+Q LESY+ Sbjct: 271 EACINSLYLCDYSGFFRTLADVEVNHLKCDQFLVAHYRYYVREMRRRAYAQLLESYR 327
>RPN7_YEAST (Q06103) 26S proteasome regulatory subunit RPN7| Length = 429 Score = 82.0 bits (201), Expect(2) = 2e-20 Identities = 36/76 (47%), Positives = 57/76 (75%) Frame = -2 Query: 457 RSVTMEAMASAFGVTVDFIDQELSRFIAAGKLHCKIDKVAGVLETNRPDERNAFYQSTIK 278 +++++++MASAFGV+V F+D +L +FI +L+C ID+V G++ETNRPD +NA Y +K Sbjct: 346 KTLSLKSMASAFGVSVAFLDNDLGKFIPNKQLNCVIDRVNGIVETNRPDNKNAQYHLLVK 405 Query: 277 QGDFLLNRIQKLSRVI 230 QGD LL ++QK + Sbjct: 406 QGDGLLTKLQKYGAAV 421 Score = 37.0 bits (84), Expect(2) = 2e-20 Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 1/56 (1%) Frame = -1 Query: 620 SFLTPLYNCQYKSFFVAFSGLMEQIKLD-RYLQPHFRYYMREVRTVVYSQFLESYK 456 S LY Y S+F + + +YL H +++RE+R VY+Q LESYK Sbjct: 291 SLTISLYASDYASYFPYLLETYANVLIPCKYLNRHADFFVREMRRKVYAQLLESYK 346
>CSN1_XENLA (Q6NRT5) COP9 signalosome complex subunit 1 (Signalosome subunit 1)| Length = 487 Score = 40.4 bits (93), Expect(2) = 2e-06 Identities = 19/67 (28%), Positives = 38/67 (56%) Frame = -2 Query: 472 FWSHTRSVTMEAMASAFGVTVDFIDQELSRFIAAGKLHCKIDKVAGVLETNRPDERNAFY 293 ++S S M MA+AF TV ++ EL++ I G ++ +ID + +L D+R+ + Sbjct: 373 YFSPYVSADMYKMATAFNTTVSALEDELTQLILEGLINARIDSHSKILYARDVDQRSTTF 432 Query: 292 QSTIKQG 272 + +++ G Sbjct: 433 EKSLQMG 439 Score = 30.8 bits (68), Expect(2) = 2e-06 Identities = 14/52 (26%), Positives = 21/52 (40%) Frame = -1 Query: 602 YNCQYKSFFVAFSGLMEQIKLDRYLQPHFRYYMREVRTVVYSQFLESYKKCD 447 Y +Y S + + + LD YL PH R ++R Q+ Y D Sbjct: 330 YESKYASCLKMLDEIKDNLLLDMYLAPHVRTLYTQIRNRALIQYFSPYVSAD 381
>CSN1_MOUSE (Q99LD4) COP9 signalosome complex subunit 1 (Signalosome subunit 1)| (SGN1) (JAB1-containing signalosome subunit 1) (G protein pathway suppressor 1) (GPS1 protein) Length = 471 Score = 39.3 bits (90), Expect(2) = 4e-06 Identities = 19/67 (28%), Positives = 37/67 (55%) Frame = -2 Query: 472 FWSHTRSVTMEAMASAFGVTVDFIDQELSRFIAAGKLHCKIDKVAGVLETNRPDERNAFY 293 ++S S M MA+AF TV ++ EL++ I G ++ +ID + +L D+R+ + Sbjct: 357 YFSPYVSADMHKMAAAFNTTVAALEDELTQLILEGLINARIDSHSKILYARDVDQRSTTF 416 Query: 292 QSTIKQG 272 + ++ G Sbjct: 417 EKSLLMG 423 Score = 30.8 bits (68), Expect(2) = 4e-06 Identities = 14/52 (26%), Positives = 21/52 (40%) Frame = -1 Query: 602 YNCQYKSFFVAFSGLMEQIKLDRYLQPHFRYYMREVRTVVYSQFLESYKKCD 447 Y +Y S + + + LD YL PH R ++R Q+ Y D Sbjct: 314 YESKYASCLKMLDEMKDNLLLDMYLAPHVRTLYTQIRNRALIQYFSPYVSAD 365
>CSN1_RAT (P97834) COP9 signalosome complex subunit 1 (Signalosome subunit 1)| (SGN1) (JAB1-containing signalosome subunit 1) (G protein pathway suppressor 1) (MFH protein) Length = 471 Score = 38.9 bits (89), Expect(2) = 5e-06 Identities = 19/67 (28%), Positives = 37/67 (55%) Frame = -2 Query: 472 FWSHTRSVTMEAMASAFGVTVDFIDQELSRFIAAGKLHCKIDKVAGVLETNRPDERNAFY 293 ++S S M MA+AF TV ++ EL++ I G ++ +ID + +L D+R+ + Sbjct: 357 YFSPYVSADMHKMAAAFNTTVAALEDELTQVILEGLINARIDSHSKILYARDVDQRSTTF 416 Query: 292 QSTIKQG 272 + ++ G Sbjct: 417 EKSLLMG 423 Score = 30.8 bits (68), Expect(2) = 5e-06 Identities = 14/52 (26%), Positives = 21/52 (40%) Frame = -1 Query: 602 YNCQYKSFFVAFSGLMEQIKLDRYLQPHFRYYMREVRTVVYSQFLESYKKCD 447 Y +Y S + + + LD YL PH R ++R Q+ Y D Sbjct: 314 YESKYASCLKMLDEMKDNLLLDMYLAPHVRTLYTQIRNRALIQYFSPYVSAD 365
>CSN1_DROME (Q9VVU5) COP9 signalosome complex subunit 1b (Signalosome subunit| 1b) (Dch1-2) Length = 525 Score = 36.2 bits (82), Expect(2) = 3e-04 Identities = 18/67 (26%), Positives = 34/67 (50%) Frame = -2 Query: 472 FWSHTRSVTMEAMASAFGVTVDFIDQELSRFIAAGKLHCKIDKVAGVLETNRPDERNAFY 293 ++S S M MA AF +V ++ E+ + I G++ +ID +L D+RN+ + Sbjct: 406 YFSPYMSADMHKMAMAFNSSVGDLENEVMQLILDGQIQARIDSHNKILFAKEADQRNSTF 465 Query: 292 QSTIKQG 272 + + G Sbjct: 466 ERALIMG 472 Score = 27.3 bits (59), Expect(2) = 3e-04 Identities = 11/52 (21%), Positives = 20/52 (38%) Frame = -1 Query: 602 YNCQYKSFFVAFSGLMEQIKLDRYLQPHFRYYMREVRTVVYSQFLESYKKCD 447 Y +Y S + + + +D Y+ PH ++R Q+ Y D Sbjct: 363 YESKYASCLTLLDEIRDNLLVDMYIAPHVTTLYTKIRNRALIQYFSPYMSAD 414
>CSN1_ARATH (P45432) COP9 signalosome complex subunit 1 (CSN complex subunit 1)| (Constitutive photomorphogenesis protein 11) (FUSCA protein 6) (FUSCA6) Length = 441 Score = 40.4 bits (93), Expect = 0.004 Identities = 19/62 (30%), Positives = 33/62 (53%) Frame = -2 Query: 454 SVTMEAMASAFGVTVDFIDQELSRFIAAGKLHCKIDKVAGVLETNRPDERNAFYQSTIKQ 275 SV + MA AF +V +++EL I ++ +ID +L D+RNA +Q ++ Sbjct: 352 SVDLSRMADAFKTSVSGLEKELEALITDNQIQARIDSHNKILYARHADQRNATFQKVLQM 411 Query: 274 GD 269 G+ Sbjct: 412 GN 413
>PSD12_MOUSE (Q9D8W5) 26S proteasome non-ATPase regulatory subunit 12 (26S| proteasome regulatory subunit p55) Length = 455 Score = 38.5 bits (88), Expect = 0.016 Identities = 19/74 (25%), Positives = 39/74 (52%) Frame = -2 Query: 451 VTMEAMASAFGVTVDFIDQELSRFIAAGKLHCKIDKVAGVLETNRPDERNAFYQSTIKQG 272 +TM+ MA ++VD + LS + + K+D++AGV+ RP + N ++ Sbjct: 372 ITMKRMAQLLDLSVDESEAFLSNLVVNKTIFAKVDRLAGVINFQRPKDPNNLLNDWSQKL 431 Query: 271 DFLLNRIQKLSRVI 230 + L++ + K + +I Sbjct: 432 NSLMSLVNKTTHLI 445
>PSD12_PONPY (Q5RBI3) 26S proteasome non-ATPase regulatory subunit 12 (26S| proteasome regulatory subunit p55) Length = 455 Score = 38.1 bits (87), Expect = 0.021 Identities = 18/74 (24%), Positives = 39/74 (52%) Frame = -2 Query: 451 VTMEAMASAFGVTVDFIDQELSRFIAAGKLHCKIDKVAGVLETNRPDERNAFYQSTIKQG 272 +TM+ MA ++VD + LS + + K+D++AG++ RP + N ++ Sbjct: 372 ITMKRMAQLLDLSVDESEAFLSNLVVNKTIFAKVDRLAGIINFQRPKDPNNLLNDWSQKL 431 Query: 271 DFLLNRIQKLSRVI 230 + L++ + K + +I Sbjct: 432 NSLMSLVNKTTHLI 445
>PSD12_HUMAN (O00232) 26S proteasome non-ATPase regulatory subunit 12 (26S| proteasome regulatory subunit p55) Length = 455 Score = 38.1 bits (87), Expect = 0.021 Identities = 18/74 (24%), Positives = 39/74 (52%) Frame = -2 Query: 451 VTMEAMASAFGVTVDFIDQELSRFIAAGKLHCKIDKVAGVLETNRPDERNAFYQSTIKQG 272 +TM+ MA ++VD + LS + + K+D++AG++ RP + N ++ Sbjct: 372 ITMKRMAQLLDLSVDESEAFLSNLVVNKTIFAKVDRLAGIINFQRPKDPNNLLNDWSQKL 431 Query: 271 DFLLNRIQKLSRVI 230 + L++ + K + +I Sbjct: 432 NSLMSLVNKTTHLI 445
>FBX11_MOUSE (Q7TPD1) F-box only protein 11 (Fragment)| Length = 521 Score = 32.0 bits (71), Expect = 1.5 Identities = 18/68 (26%), Positives = 30/68 (44%) Frame = +2 Query: 326 LQNTSDLVNLAVKLASCNKTRKFLVYEINSHTKCRSHSFHRHTSCMTPKTVSRRQCALPS 505 + N D + AV C +Y+I+S+T H F+R +C T + + Sbjct: 413 IMNNQDAIEKAVSRGQC-------LYKISSYTSYPMHDFYRCHTCNTTDRNAICVNCIKK 465 Query: 506 CSSGNEVE 529 C G++VE Sbjct: 466 CHQGHDVE 473
>FBX11_RAT (Q7TSL3) F-box only protein 11| Length = 843 Score = 32.0 bits (71), Expect = 1.5 Identities = 18/68 (26%), Positives = 30/68 (44%) Frame = +2 Query: 326 LQNTSDLVNLAVKLASCNKTRKFLVYEINSHTKCRSHSFHRHTSCMTPKTVSRRQCALPS 505 + N D + AV C +Y+I+S+T H F+R +C T + + Sbjct: 735 IMNNQDAIEKAVSRGQC-------LYKISSYTSYPMHDFYRCHTCNTTDRNAICVNCIKK 787 Query: 506 CSSGNEVE 529 C G++VE Sbjct: 788 CHQGHDVE 795
>FBX11_HUMAN (Q86XK2) F-box only protein 11 (Vitiligo-associated protein VIT-1)| Length = 843 Score = 32.0 bits (71), Expect = 1.5 Identities = 18/68 (26%), Positives = 30/68 (44%) Frame = +2 Query: 326 LQNTSDLVNLAVKLASCNKTRKFLVYEINSHTKCRSHSFHRHTSCMTPKTVSRRQCALPS 505 + N D + AV C +Y+I+S+T H F+R +C T + + Sbjct: 735 IMNNQDAIEKAVSRGQC-------LYKISSYTSYPMHDFYRCHTCNTTDRNAICVNCIKK 787 Query: 506 CSSGNEVE 529 C G++VE Sbjct: 788 CHQGHDVE 795
>WFDC1_CHICK (Q8JG33) WAP four-disulfide core domain protein 1 precursor (ps20| protein) Length = 222 Score = 31.2 bits (69), Expect = 2.6 Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 3/73 (4%) Frame = +2 Query: 320 VCLQNTSDLVNLAVKLASCNKTRKFLVYEINSHTKCRSHSFH--RHTSCMTP-KTVSRRQ 490 V L ++ NL + T K+ YE H SHS H ++ C P +T+ R Sbjct: 24 VLLADSGCARNLWKRALHLKMTEKYDDYEYPLH----SHSAHYQKNDRCPPPPQTLPDRA 79 Query: 491 CALPSCSSGNEVE 529 C +PSC S +E E Sbjct: 80 CEVPSCRSDSECE 92
>V70K_OYMV (P20130) 66 kDa protein| Length = 597 Score = 31.2 bits (69), Expect = 2.6 Identities = 27/110 (24%), Positives = 47/110 (42%) Frame = +2 Query: 272 PLLDGRLVESIPLIRPVCLQNTSDLVNLAVKLASCNKTRKFLVYEINSHTKCRSHSFHRH 451 PL D R + S+PL LQ+ SC+ RK L ++ H+F +H Sbjct: 152 PLSDTRPLHSVPLSSEAPLQS------------SCSP-RKLLHRPLSPPKPLHLHNFRQH 198 Query: 452 TSCMTPKTVSRRQCALPSCSSGNEVEDNGLT*SVPSSQRMQQKMTCTGNC 601 +S + ++ R+ P C+ + + + L PSS+ + + G C Sbjct: 199 SSLCSRRSPCRKLRPTPRCNQLAQAQQHPL----PSSKPLSLQAGILGPC 244
>CSN1_HUMAN (Q13098) COP9 signalosome complex subunit 1 (Signalosome subunit 1)| (SGN1) (JAB1-containing signalosome subunit 1) (G protein pathway suppressor 1) (GPS1 protein) (MFH protein) Length = 471 Score = 30.8 bits (68), Expect = 3.4 Identities = 14/52 (26%), Positives = 21/52 (40%) Frame = -1 Query: 602 YNCQYKSFFVAFSGLMEQIKLDRYLQPHFRYYMREVRTVVYSQFLESYKKCD 447 Y +Y S + + + LD YL PH R ++R Q+ Y D Sbjct: 314 YESKYASCLKMLDEMKDNLLLDMYLAPHVRTLYTQIRNRALIQYFSPYVSAD 365
>ADA12_HUMAN (O43184) ADAM 12 precursor (EC 3.4.24.-) (A disintegrin and| metalloproteinase domain 12) (Meltrin alpha) Length = 909 Score = 29.6 bits (65), Expect = 7.6 Identities = 18/48 (37%), Positives = 25/48 (52%) Frame = -3 Query: 150 PPRGYGQCLALLSVRGRSLV*ITMNSYPRRSG*RMFLPVMNLFIHSKP 7 PPRG+ C A L G+ L+ +SYP + R L N+ I S+P Sbjct: 757 PPRGFQPCQAHLGHLGKGLMRKPPDSYPPKDNPRRLLQCQNVDI-SRP 803
>AIM1_HUMAN (Q9Y4K1) Absent in melanoma 1 protein| Length = 1723 Score = 29.3 bits (64), Expect = 9.9 Identities = 13/25 (52%), Positives = 14/25 (56%), Gaps = 3/25 (12%) Frame = -3 Query: 213 CSCWSSDPA---KVVPGCWIYFS*P 148 CS WS P KVV GCWI + P Sbjct: 1046 CSSWSLSPVILIKVVRGCWILYEQP 1070
>PPA_ASPFI (Q12546) Acid phosphatase precursor (EC 3.1.3.2) (pH 6-optimum acid| phosphatase) (APase6) Length = 614 Score = 29.3 bits (64), Expect = 9.9 Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 4/40 (10%) Frame = -1 Query: 608 PLYNCQYKSFFV----AFSGLMEQIKLDRYLQPHFRYYMR 501 P+Y+ Y S+ + AF GL+ + +D YL H +Y R Sbjct: 466 PMYSSAYSSYQLHVREAFEGLLLKYGVDAYLSGHIHWYER 505 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 88,546,335 Number of Sequences: 219361 Number of extensions: 1806137 Number of successful extensions: 4641 Number of sequences better than 10.0: 25 Number of HSP's better than 10.0 without gapping: 4504 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4640 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5710231900 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
