| Clone Name | rbags11j13 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 190 bits (96), Expect = 4e-45 Identities = 168/192 (87%) Strand = Plus / Minus Query: 460 catggtgaagtcctcagaatcagaatagccatccatcatgctctcaagtctcacaaagat 519 |||||||||||| || || || |||||| |||||||||||||||| || || || |||| Sbjct: 6204422 catggtgaagtcttcggagtccgaatagtcatccatcatgctctccagcctgacgaagag 6204363 Query: 520 caggagcctgtcaagaagcatcttctcgaagtcatcatgcttcttgtgaatgtccttgta 579 || |||||||||||| ||||||||||||||||| |||| ||||||| ||||||||||| Sbjct: 6204362 caagagcctgtcaaggagcatcttctcgaagtcgtcatctctcttgtggatgtccttgta 6204303 Query: 580 cccgtacctcgtgacacagcggaacatgtgaaagttctttggcccaatcctcttcatgat 639 ||||||||||| |||||| ||||||||||| |||||||||||||| |||||||||| ||| Sbjct: 6204302 cccgtacctcgcgacacaacggaacatgtggaagttctttggcccgatcctcttcacgat 6204243 Query: 640 aaaccgttcttc 651 |||| |||||| Sbjct: 6204242 gaacctttcttc 6204231 Score = 143 bits (72), Expect = 8e-31 Identities = 177/212 (83%) Strand = Plus / Minus Query: 86 gttcatatatagtagatctggcctacgttgagaaggctttcatgaggaacattgaatatc 145 |||||||||||||| ||||||||||| |||||||| |||||||| ||||||||||||||| Sbjct: 6204829 gttcatatatagtatatctggcctacattgagaagactttcatggggaacattgaatatc 6204770 Query: 146 acgctgtgttctctacagaccttcctgaggaaggcatacaggtgatccacaacaatcctc 205 || |||| || || |||| |||||||||||| ||| ||| | || |||| ||| | || Sbjct: 6204769 acactgttctccctgcagatcttcctgaggaatgcaaacacataattcacagcaaccttc 6204710 Query: 206 ttgatgatccctgaatccctgcgggcacggacaatggtgttgccgaggatgtgcacgaca 265 ||||||||||||||||| ||| || | || | ||||| || ||||||||||||||| Sbjct: 6204709 ttgatgatccctgaatcagggcgcgcgtgaaccacagtgttccccaggatgtgcacgaca 6204650 Query: 266 cccgcgtccttgcagctgttgaggaactccag 297 || ||||||||||| | ||| ||||||||||| Sbjct: 6204649 ccagcgtccttgcaccggttcaggaactccag 6204618 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 287 aggaactccagttcgtcgccgaatgtttggctggaataccttgttaggctgtt 339 |||||||||||||| |||||||| || ||||| || |||||||| |||||||| Sbjct: 6204613 aggaactccagttcatcgccgaacgtctggctcgagtaccttgtcaggctgtt 6204561
>dbj|AP003875.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1119_C05 Length = 126112 Score = 190 bits (96), Expect = 4e-45 Identities = 168/192 (87%) Strand = Plus / Minus Query: 460 catggtgaagtcctcagaatcagaatagccatccatcatgctctcaagtctcacaaagat 519 |||||||||||| || || || |||||| |||||||||||||||| || || || |||| Sbjct: 67815 catggtgaagtcttcggagtccgaatagtcatccatcatgctctccagcctgacgaagag 67756 Query: 520 caggagcctgtcaagaagcatcttctcgaagtcatcatgcttcttgtgaatgtccttgta 579 || |||||||||||| ||||||||||||||||| |||| ||||||| ||||||||||| Sbjct: 67755 caagagcctgtcaaggagcatcttctcgaagtcgtcatctctcttgtggatgtccttgta 67696 Query: 580 cccgtacctcgtgacacagcggaacatgtgaaagttctttggcccaatcctcttcatgat 639 ||||||||||| |||||| ||||||||||| |||||||||||||| |||||||||| ||| Sbjct: 67695 cccgtacctcgcgacacaacggaacatgtggaagttctttggcccgatcctcttcacgat 67636 Query: 640 aaaccgttcttc 651 |||| |||||| Sbjct: 67635 gaacctttcttc 67624 Score = 143 bits (72), Expect = 8e-31 Identities = 177/212 (83%) Strand = Plus / Minus Query: 86 gttcatatatagtagatctggcctacgttgagaaggctttcatgaggaacattgaatatc 145 |||||||||||||| ||||||||||| |||||||| |||||||| ||||||||||||||| Sbjct: 68222 gttcatatatagtatatctggcctacattgagaagactttcatggggaacattgaatatc 68163 Query: 146 acgctgtgttctctacagaccttcctgaggaaggcatacaggtgatccacaacaatcctc 205 || |||| || || |||| |||||||||||| ||| ||| | || |||| ||| | || Sbjct: 68162 acactgttctccctgcagatcttcctgaggaatgcaaacacataattcacagcaaccttc 68103 Query: 206 ttgatgatccctgaatccctgcgggcacggacaatggtgttgccgaggatgtgcacgaca 265 ||||||||||||||||| ||| || | || | ||||| || ||||||||||||||| Sbjct: 68102 ttgatgatccctgaatcagggcgcgcgtgaaccacagtgttccccaggatgtgcacgaca 68043 Query: 266 cccgcgtccttgcagctgttgaggaactccag 297 || ||||||||||| | ||| ||||||||||| Sbjct: 68042 ccagcgtccttgcaccggttcaggaactccag 68011 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 287 aggaactccagttcgtcgccgaatgtttggctggaataccttgttaggctgtt 339 |||||||||||||| |||||||| || ||||| || |||||||| |||||||| Sbjct: 68006 aggaactccagttcatcgccgaacgtctggctcgagtaccttgtcaggctgtt 67954
>emb|AJ427981.1|OSA427981 Oryza sativa HAK12 gene for putative potasium transporter, exons 1-9 Length = 5418 Score = 190 bits (96), Expect = 4e-45 Identities = 168/192 (87%) Strand = Plus / Minus Query: 460 catggtgaagtcctcagaatcagaatagccatccatcatgctctcaagtctcacaaagat 519 |||||||||||| || || || |||||| |||||||||||||||| || || || |||| Sbjct: 4517 catggtgaagtcttcggagtccgaatagtcatccatcatgctctccagcctgacgaagag 4458 Query: 520 caggagcctgtcaagaagcatcttctcgaagtcatcatgcttcttgtgaatgtccttgta 579 || |||||||||||| ||||||||||||||||| |||| ||||||| ||||||||||| Sbjct: 4457 caagagcctgtcaaggagcatcttctcgaagtcgtcatctctcttgtggatgtccttgta 4398 Query: 580 cccgtacctcgtgacacagcggaacatgtgaaagttctttggcccaatcctcttcatgat 639 ||||||||||| |||||| ||||||||||| |||||||||||||| |||||||||| ||| Sbjct: 4397 cccgtacctcgcgacacaacggaacatgtggaagttctttggcccgatcctcttcacgat 4338 Query: 640 aaaccgttcttc 651 |||| |||||| Sbjct: 4337 gaacctttcttc 4326 Score = 135 bits (68), Expect = 2e-28 Identities = 176/212 (83%) Strand = Plus / Minus Query: 86 gttcatatatagtagatctggcctacgttgagaaggctttcatgaggaacattgaatatc 145 |||||||||||||| ||||||||||| |||||||| |||||||| ||||||||||||||| Sbjct: 4924 gttcatatatagtatatctggcctacattgagaagactttcatggggaacattgaatatc 4865 Query: 146 acgctgtgttctctacagaccttcctgaggaaggcatacaggtgatccacaacaatcctc 205 || |||| || || |||| |||||||||||| ||| ||| | || |||| ||| | || Sbjct: 4864 acactgttctccctgcagatcttcctgaggaatgcaaacacataattcacagcaaccttc 4805 Query: 206 ttgatgatccctgaatccctgcgggcacggacaatggtgttgccgaggatgtgcacgaca 265 ||||||||||||||||| ||| || | || | ||||| || | ||||||||||||| Sbjct: 4804 ttgatgatccctgaatcagggcgcgcgtgaaccacagtgttccccaagatgtgcacgaca 4745 Query: 266 cccgcgtccttgcagctgttgaggaactccag 297 || ||||||||||| | ||| ||||||||||| Sbjct: 4744 ccagcgtccttgcaccggttcaggaactccag 4713 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 289 gaactccagttcgtcgccgaatgtttggctggaataccttgttaggctgtt 339 |||||||||||| |||||||| || ||||| || |||||||| |||||||| Sbjct: 4706 gaactccagttcatcgccgaacgtctggctcgagtaccttgtcaggctgtt 4656
>dbj|AK069377.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023012J20, full insert sequence Length = 3200 Score = 190 bits (96), Expect = 4e-45 Identities = 168/192 (87%) Strand = Plus / Minus Query: 460 catggtgaagtcctcagaatcagaatagccatccatcatgctctcaagtctcacaaagat 519 |||||||||||| || || || |||||| |||||||||||||||| || || || |||| Sbjct: 2547 catggtgaagtcttcggagtccgaatagtcatccatcatgctctccagcctgacgaagag 2488 Query: 520 caggagcctgtcaagaagcatcttctcgaagtcatcatgcttcttgtgaatgtccttgta 579 || |||||||||||| ||||||||||||||||| |||| ||||||| ||||||||||| Sbjct: 2487 caagagcctgtcaaggagcatcttctcgaagtcgtcatctctcttgtggatgtccttgta 2428 Query: 580 cccgtacctcgtgacacagcggaacatgtgaaagttctttggcccaatcctcttcatgat 639 ||||||||||| |||||| ||||||||||| |||||||||||||| |||||||||| ||| Sbjct: 2427 cccgtacctcgcgacacaacggaacatgtggaagttctttggcccgatcctcttcacgat 2368 Query: 640 aaaccgttcttc 651 |||| |||||| Sbjct: 2367 gaacctttcttc 2356 Score = 143 bits (72), Expect = 8e-31 Identities = 177/212 (83%) Strand = Plus / Minus Query: 86 gttcatatatagtagatctggcctacgttgagaaggctttcatgaggaacattgaatatc 145 |||||||||||||| ||||||||||| |||||||| |||||||| ||||||||||||||| Sbjct: 2954 gttcatatatagtatatctggcctacattgagaagactttcatggggaacattgaatatc 2895 Query: 146 acgctgtgttctctacagaccttcctgaggaaggcatacaggtgatccacaacaatcctc 205 || |||| || || |||| |||||||||||| ||| ||| | || |||| ||| | || Sbjct: 2894 acactgttctccctgcagatcttcctgaggaatgcaaacacataattcacagcaaccttc 2835 Query: 206 ttgatgatccctgaatccctgcgggcacggacaatggtgttgccgaggatgtgcacgaca 265 ||||||||||||||||| ||| || | || | ||||| || ||||||||||||||| Sbjct: 2834 ttgatgatccctgaatcagggcgcgcgtgaaccacagtgttccccaggatgtgcacgaca 2775 Query: 266 cccgcgtccttgcagctgttgaggaactccag 297 || ||||||||||| | ||| ||||||||||| Sbjct: 2774 ccagcgtccttgcaccggttcaggaactccag 2743 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 287 aggaactccagttcgtcgccgaatgtttggctggaataccttgttaggctgtt 339 |||||||||||||| |||||||| || ||||| || |||||||| |||||||| Sbjct: 2738 aggaactccagttcatcgccgaacgtctggctcgagtaccttgtcaggctgtt 2686
>ref|XM_473875.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2217 Score = 109 bits (55), Expect = 1e-20 Identities = 139/167 (83%) Strand = Plus / Minus Query: 465 tgaagtcctcagaatcagaatagccatccatcatgctctcaagtctcacaaagatcagga 524 ||||||| |||||||| |||||||| |||||||||||||| |||| || ||| || || Sbjct: 1813 tgaagtcatcagaatcggaatagccctccatcatgctctcgagtcgcaggaaggacaaga 1754 Query: 525 gcctgtcaagaagcatcttctcgaagtcatcatgcttcttgtgaatgtccttgtacccgt 584 | | || | ||||||||||| ||||| |||| |||||||| | ||| |||||||||| Sbjct: 1753 ggcagttgaagagcatcttctcaaagtcctcatctttcttgtggaggtctttgtacccgt 1694 Query: 585 acctcgtgacacagcggaacatgtgaaagttctttggcccaatcctc 631 |||||| ||||||||||| ||||| |||||||||||||| |||||| Sbjct: 1693 acctcgcaacacagcggaaaatgtggaagttctttggcccgatcctc 1647 Score = 89.7 bits (45), Expect = 1e-14 Identities = 171/213 (80%) Strand = Plus / Minus Query: 88 tcatatatagtagatctggcctacgttgagaaggctttcatgaggaacattgaatatcac 147 ||||||||| || || ||||| || || || | ||| ||||| ||||||||||| ||||| Sbjct: 2217 tcatatataatatatttggccaacattaagcaagctctcatggggaacattgaagatcac 2158 Query: 148 gctgtgttctctacagaccttcctgaggaaggcatacaggtgatccacaacaatcctctt 207 |||| || || |||| |||||| | ||||||||||| || || || | ||| |||| Sbjct: 2157 actgttctccctgcagatcttcctcatgaaggcatacatgtaatttaccgcgatcttctt 2098 Query: 208 gatgatccctgaatccctgcgggcacggacaatggtgttgccgaggatgtgcacgacacc 267 ||||||||| |||||||| | || |||| |||||||| ||||||||||| |||||||| Sbjct: 2097 gatgatccccgaatccctcctcgcgaggacgatggtgttcccgaggatgtggacgacacc 2038 Query: 268 cgcgtccttgcagctgttgaggaactccagttc 300 || ||||| || | ||| |||||||||||||| Sbjct: 2037 ggcatccttacaccggttcaggaactccagttc 2005 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 tgtgatgagtagctcaggtc 399 |||||||||||||||||||| Sbjct: 1919 tgtgatgagtagctcaggtc 1900
>emb|AL731610.4|OSJN00255 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0070C17, complete sequence Length = 160484 Score = 109 bits (55), Expect = 1e-20 Identities = 139/167 (83%) Strand = Plus / Plus Query: 465 tgaagtcctcagaatcagaatagccatccatcatgctctcaagtctcacaaagatcagga 524 ||||||| |||||||| |||||||| |||||||||||||| |||| || ||| || || Sbjct: 144925 tgaagtcatcagaatcggaatagccctccatcatgctctcgagtcgcaggaaggacaaga 144984 Query: 525 gcctgtcaagaagcatcttctcgaagtcatcatgcttcttgtgaatgtccttgtacccgt 584 | | || | ||||||||||| ||||| |||| |||||||| | ||| |||||||||| Sbjct: 144985 ggcagttgaagagcatcttctcaaagtcctcatctttcttgtggaggtctttgtacccgt 145044 Query: 585 acctcgtgacacagcggaacatgtgaaagttctttggcccaatcctc 631 |||||| ||||||||||| ||||| |||||||||||||| |||||| Sbjct: 145045 acctcgcaacacagcggaaaatgtggaagttctttggcccgatcctc 145091 Score = 91.7 bits (46), Expect = 3e-15 Identities = 172/214 (80%) Strand = Plus / Plus Query: 87 ttcatatatagtagatctggcctacgttgagaaggctttcatgaggaacattgaatatca 146 |||||||||| || || ||||| || || || | ||| ||||| ||||||||||| |||| Sbjct: 144520 ttcatatataatatatttggccaacattaagcaagctctcatggggaacattgaagatca 144579 Query: 147 cgctgtgttctctacagaccttcctgaggaaggcatacaggtgatccacaacaatcctct 206 | |||| || || |||| |||||| | ||||||||||| || || || | ||| ||| Sbjct: 144580 cactgttctccctgcagatcttcctcatgaaggcatacatgtaatttaccgcgatcttct 144639 Query: 207 tgatgatccctgaatccctgcgggcacggacaatggtgttgccgaggatgtgcacgacac 266 |||||||||| |||||||| | || |||| |||||||| ||||||||||| ||||||| Sbjct: 144640 tgatgatccccgaatccctcctcgcgaggacgatggtgttcccgaggatgtggacgacac 144699 Query: 267 ccgcgtccttgcagctgttgaggaactccagttc 300 | || ||||| || | ||| |||||||||||||| Sbjct: 144700 cggcatccttacaccggttcaggaactccagttc 144733 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 tgtgatgagtagctcaggtc 399 |||||||||||||||||||| Sbjct: 144819 tgtgatgagtagctcaggtc 144838
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 109 bits (55), Expect = 1e-20 Identities = 139/167 (83%) Strand = Plus / Plus Query: 465 tgaagtcctcagaatcagaatagccatccatcatgctctcaagtctcacaaagatcagga 524 ||||||| |||||||| |||||||| |||||||||||||| |||| || ||| || || Sbjct: 31162844 tgaagtcatcagaatcggaatagccctccatcatgctctcgagtcgcaggaaggacaaga 31162903 Query: 525 gcctgtcaagaagcatcttctcgaagtcatcatgcttcttgtgaatgtccttgtacccgt 584 | | || | ||||||||||| ||||| |||| |||||||| | ||| |||||||||| Sbjct: 31162904 ggcagttgaagagcatcttctcaaagtcctcatctttcttgtggaggtctttgtacccgt 31162963 Query: 585 acctcgtgacacagcggaacatgtgaaagttctttggcccaatcctc 631 |||||| ||||||||||| ||||| |||||||||||||| |||||| Sbjct: 31162964 acctcgcaacacagcggaaaatgtggaagttctttggcccgatcctc 31163010 Score = 91.7 bits (46), Expect = 3e-15 Identities = 172/214 (80%) Strand = Plus / Plus Query: 87 ttcatatatagtagatctggcctacgttgagaaggctttcatgaggaacattgaatatca 146 |||||||||| || || ||||| || || || | ||| ||||| ||||||||||| |||| Sbjct: 31162439 ttcatatataatatatttggccaacattaagcaagctctcatggggaacattgaagatca 31162498 Query: 147 cgctgtgttctctacagaccttcctgaggaaggcatacaggtgatccacaacaatcctct 206 | |||| || || |||| |||||| | ||||||||||| || || || | ||| ||| Sbjct: 31162499 cactgttctccctgcagatcttcctcatgaaggcatacatgtaatttaccgcgatcttct 31162558 Query: 207 tgatgatccctgaatccctgcgggcacggacaatggtgttgccgaggatgtgcacgacac 266 |||||||||| |||||||| | || |||| |||||||| ||||||||||| ||||||| Sbjct: 31162559 tgatgatccccgaatccctcctcgcgaggacgatggtgttcccgaggatgtggacgacac 31162618 Query: 267 ccgcgtccttgcagctgttgaggaactccagttc 300 | || ||||| || | ||| |||||||||||||| Sbjct: 31162619 cggcatccttacaccggttcaggaactccagttc 31162652 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 tgtgatgagtagctcaggtc 399 |||||||||||||||||||| Sbjct: 31162738 tgtgatgagtagctcaggtc 31162757
>emb|AJ427980.1|OSA427980 Oryza sativa HAK11 gene for putative potasium transporter, exons 1-9 Length = 4562 Score = 109 bits (55), Expect = 1e-20 Identities = 139/167 (83%) Strand = Plus / Minus Query: 465 tgaagtcctcagaatcagaatagccatccatcatgctctcaagtctcacaaagatcagga 524 ||||||| |||||||| |||||||| |||||||||||||| |||| || ||| || || Sbjct: 3669 tgaagtcatcagaatcggaatagccctccatcatgctctcgagtcgcaggaaggacaaga 3610 Query: 525 gcctgtcaagaagcatcttctcgaagtcatcatgcttcttgtgaatgtccttgtacccgt 584 | | || | ||||||||||| ||||| |||| |||||||| | ||| |||||||||| Sbjct: 3609 ggcagttgaagagcatcttctcaaagtcctcatctttcttgtggaggtctttgtacccgt 3550 Query: 585 acctcgtgacacagcggaacatgtgaaagttctttggcccaatcctc 631 |||||| ||||||||||| ||||| |||||||||||||| |||||| Sbjct: 3549 acctcgcaacacagcggaaaatgtggaagttctttggcccgatcctc 3503 Score = 91.7 bits (46), Expect = 3e-15 Identities = 172/214 (80%) Strand = Plus / Minus Query: 87 ttcatatatagtagatctggcctacgttgagaaggctttcatgaggaacattgaatatca 146 |||||||||| || || ||||| || || || | ||| ||||| ||||||||||| |||| Sbjct: 4074 ttcatatataatatatttggccaacattaagcaagctctcatggggaacattgaagatca 4015 Query: 147 cgctgtgttctctacagaccttcctgaggaaggcatacaggtgatccacaacaatcctct 206 | |||| || || |||| |||||| | ||||||||||| || || || | ||| ||| Sbjct: 4014 cactgttctccctgcagatcttcctcatgaaggcatacatgtaatttaccgcgatcttct 3955 Query: 207 tgatgatccctgaatccctgcgggcacggacaatggtgttgccgaggatgtgcacgacac 266 |||||||||| |||||||| | || |||| |||||||| ||||||||||| ||||||| Sbjct: 3954 tgatgatccccgaatccctcctcgcgaggacgatggtgttcccgaggatgtggacgacac 3895 Query: 267 ccgcgtccttgcagctgttgaggaactccagttc 300 | || ||||| || | ||| |||||||||||||| Sbjct: 3894 cggcatccttacaccggttcaggaactccagttc 3861 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 tgtgatgagtagctcaggtc 399 |||||||||||||||||||| Sbjct: 3775 tgtgatgagtagctcaggtc 3756
>dbj|AK072123.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013122K08, full insert sequence Length = 3453 Score = 109 bits (55), Expect = 1e-20 Identities = 139/167 (83%) Strand = Plus / Minus Query: 465 tgaagtcctcagaatcagaatagccatccatcatgctctcaagtctcacaaagatcagga 524 ||||||| |||||||| |||||||| |||||||||||||| |||| || ||| || || Sbjct: 2840 tgaagtcatcagaatcggaatagccctccatcatgctctcgagtcgcaggaaggacaaga 2781 Query: 525 gcctgtcaagaagcatcttctcgaagtcatcatgcttcttgtgaatgtccttgtacccgt 584 | | || | ||||||||||| ||||| |||| |||||||| | ||| |||||||||| Sbjct: 2780 ggcagttgaagagcatcttctcaaagtcctcatctttcttgtggaggtctttgtacccgt 2721 Query: 585 acctcgtgacacagcggaacatgtgaaagttctttggcccaatcctc 631 |||||| ||||||||||| ||||| |||||||||||||| |||||| Sbjct: 2720 acctcgcaacacagcggaaaatgtggaagttctttggcccgatcctc 2674 Score = 91.7 bits (46), Expect = 3e-15 Identities = 172/214 (80%) Strand = Plus / Minus Query: 87 ttcatatatagtagatctggcctacgttgagaaggctttcatgaggaacattgaatatca 146 |||||||||| || || ||||| || || || | ||| ||||| ||||||||||| |||| Sbjct: 3245 ttcatatataatatatttggccaacattaagcaagctctcatggggaacattgaagatca 3186 Query: 147 cgctgtgttctctacagaccttcctgaggaaggcatacaggtgatccacaacaatcctct 206 | |||| || || |||| |||||| | ||||||||||| || || || | ||| ||| Sbjct: 3185 cactgttctccctgcagatcttcctcatgaaggcatacatgtaatttaccgcgatcttct 3126 Query: 207 tgatgatccctgaatccctgcgggcacggacaatggtgttgccgaggatgtgcacgacac 266 |||||||||| |||||||| | || |||| |||||||| ||||||||||| ||||||| Sbjct: 3125 tgatgatccccgaatccctcctcgcgaggacgatggtgttcccgaggatgtggacgacac 3066 Query: 267 ccgcgtccttgcagctgttgaggaactccagttc 300 | || ||||| || | ||| |||||||||||||| Sbjct: 3065 cggcatccttacaccggttcaggaactccagttc 3032 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 tgtgatgagtagctcaggtc 399 |||||||||||||||||||| Sbjct: 2946 tgtgatgagtagctcaggtc 2927
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 91.7 bits (46), Expect = 3e-15 Identities = 85/98 (86%) Strand = Plus / Plus Query: 538 catcttctcgaagtcatcatgcttcttgtgaatgtccttgtacccgtacctcgtgacaca 597 ||||||||||||||| |||| ||||||||| ||||||||||||||||||| || || || Sbjct: 22067039 catcttctcgaagtcgtcatccttcttgtggatgtccttgtacccgtaccgcgccacgca 22067098 Query: 598 gcggaacatgtgaaagttctttggcccaatcctcttca 635 ||||||||||| |||||||| || || |||| ||||| Sbjct: 22067099 ccggaacatgtggaagttcttggggccgatccgcttca 22067136 Score = 46.1 bits (23), Expect = 0.15 Identities = 68/83 (81%) Strand = Plus / Plus Query: 197 acaatcctcttgatgatccctgaatccctgcgggcacggacaatggtgttgccgaggatg 256 |||||| |||||| || ||||||||||||||| || | || | ||||| ||||||||| Sbjct: 22066659 acaatcttcttgacgaaccctgaatccctgcgagctctgatcaccgtgttcccgaggatg 22066718 Query: 257 tgcacgacacccgcgtccttgca 279 ||||| || || |||||| |||| Sbjct: 22066719 tgcaccaccccggcgtccctgca 22066741
>dbj|AP005396.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0635G10 Length = 146728 Score = 91.7 bits (46), Expect = 3e-15 Identities = 85/98 (86%) Strand = Plus / Plus Query: 538 catcttctcgaagtcatcatgcttcttgtgaatgtccttgtacccgtacctcgtgacaca 597 ||||||||||||||| |||| ||||||||| ||||||||||||||||||| || || || Sbjct: 109103 catcttctcgaagtcgtcatccttcttgtggatgtccttgtacccgtaccgcgccacgca 109162 Query: 598 gcggaacatgtgaaagttctttggcccaatcctcttca 635 ||||||||||| |||||||| || || |||| ||||| Sbjct: 109163 ccggaacatgtggaagttcttggggccgatccgcttca 109200 Score = 46.1 bits (23), Expect = 0.15 Identities = 68/83 (81%) Strand = Plus / Plus Query: 197 acaatcctcttgatgatccctgaatccctgcgggcacggacaatggtgttgccgaggatg 256 |||||| |||||| || ||||||||||||||| || | || | ||||| ||||||||| Sbjct: 108723 acaatcttcttgacgaaccctgaatccctgcgagctctgatcaccgtgttcccgaggatg 108782 Query: 257 tgcacgacacccgcgtccttgca 279 ||||| || || |||||| |||| Sbjct: 108783 tgcaccaccccggcgtccctgca 108805
>dbj|AK065464.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013020H24, full insert sequence Length = 2893 Score = 91.7 bits (46), Expect = 3e-15 Identities = 85/98 (86%) Strand = Plus / Minus Query: 538 catcttctcgaagtcatcatgcttcttgtgaatgtccttgtacccgtacctcgtgacaca 597 ||||||||||||||| |||| ||||||||| ||||||||||||||||||| || || || Sbjct: 2338 catcttctcgaagtcgtcatccttcttgtggatgtccttgtacccgtaccgcgccacgca 2279 Query: 598 gcggaacatgtgaaagttctttggcccaatcctcttca 635 ||||||||||| |||||||| || || |||| ||||| Sbjct: 2278 ccggaacatgtggaagttcttggggccgatccgcttca 2241 Score = 46.1 bits (23), Expect = 0.15 Identities = 68/83 (81%) Strand = Plus / Minus Query: 197 acaatcctcttgatgatccctgaatccctgcgggcacggacaatggtgttgccgaggatg 256 |||||| |||||| || ||||||||||||||| || | || | ||||| ||||||||| Sbjct: 2718 acaatcttcttgacgaaccctgaatccctgcgagctctgatcaccgtgttcccgaggatg 2659 Query: 257 tgcacgacacccgcgtccttgca 279 ||||| || || |||||| |||| Sbjct: 2658 tgcaccaccccggcgtccctgca 2636
>gb|AY108668.1| Zea mays PCO064352 mRNA sequence Length = 1690 Score = 65.9 bits (33), Expect = 2e-07 Identities = 129/161 (80%) Strand = Plus / Minus Query: 119 aggctttcatgaggaacattgaatatcacgctgtgttctctacagaccttcctgaggaag 178 ||||| ||||| ||||||||||| || |||||| || || |||| |||||| ||||| Sbjct: 1479 aggctctcatggggaacattgaagatggcgctgttctccctgcagatcttcctaaggaaa 1420 Query: 179 gcatacaggtgatccacaacaatcctcttgatgatccctgaatccctgcgggcacggaca 238 ||||||| || || | | ||||| ||||||||| ||||||||| |||||||| | || Sbjct: 1419 gcatacaagtaattgatagcaatcttcttgatgaaccctgaatctctgcgggccctgatg 1360 Query: 239 atggtgttgccgaggatgtgcacgacacccgcgtccttgca 279 | ||||| |||||||||||||| || || |||||| |||| Sbjct: 1359 actgtgttcccgaggatgtgcaccaccccggcgtccctgca 1319 Score = 63.9 bits (32), Expect = 6e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 536 agcatcttctcgaagtcatcatgcttcttgtgaatgtccttgta 579 ||||||| |||||||||||||| ||||||||| ||||||||||| Sbjct: 1047 agcatctgctcgaagtcatcatccttcttgtggatgtccttgta 1004
>ref|NM_102850.2| Arabidopsis thaliana KUP10; potassium ion transporter AT1G31120 (KUP10) mRNA, complete cds Length = 3135 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Minus Query: 542 ttctcgaagtcatcatgcttcttgtgaatgtccttgtacccgtacctcgtgacacagcgg 601 ||||| ||||| |||| |||||||| | ||| |||| |||||||||| || |||||| Sbjct: 2592 ttctcaaagtcgtcatctttcttgtgcaagtctctgtatccgtacctcgcaacgcagcgg 2533 Query: 602 aacatgtgaaagtt 615 |||||||||||||| Sbjct: 2532 aacatgtgaaagtt 2519
>gb|AC004793.2|F28K20 Arabidopsis thaliana chromosome 1 BAC F28K20 sequence, complete sequence Length = 76458 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Plus Query: 542 ttctcgaagtcatcatgcttcttgtgaatgtccttgtacccgtacctcgtgacacagcgg 601 ||||| ||||| |||| |||||||| | ||| |||| |||||||||| || |||||| Sbjct: 15983 ttctcaaagtcgtcatctttcttgtgcaagtctctgtatccgtacctcgcaacgcagcgg 16042 Query: 602 aacatgtgaaagtt 615 |||||||||||||| Sbjct: 16043 aacatgtgaaagtt 16056
>ref|NM_129058.3| Arabidopsis thaliana KUP11; potassium ion transporter AT2G35060 (KUP11) transcript variant AT2G35060.1 mRNA, complete cds Length = 2619 Score = 46.1 bits (23), Expect = 0.15 Identities = 68/83 (81%) Strand = Plus / Minus Query: 548 aagtcatcatgcttcttgtgaatgtccttgtacccgtacctcgtgacacagcggaacatg 607 |||||||||| |||||||| | ||| |||| |||||||| | ||| || ||||||||| Sbjct: 2058 aagtcatcatctttcttgtgcaagtctctgtatccgtaccttgcgacgcaacggaacatg 1999 Query: 608 tgaaagttctttggcccaatcct 630 || || || ||||| |||||||| Sbjct: 1998 tggaaattttttggaccaatcct 1976
>ref|NM_001036407.1| Arabidopsis thaliana KUP11; potassium ion transporter AT2G35060 (KUP11) transcript variant AT2G35060.2 mRNA, complete cds Length = 2642 Score = 46.1 bits (23), Expect = 0.15 Identities = 68/83 (81%) Strand = Plus / Minus Query: 548 aagtcatcatgcttcttgtgaatgtccttgtacccgtacctcgtgacacagcggaacatg 607 |||||||||| |||||||| | ||| |||| |||||||| | ||| || ||||||||| Sbjct: 2061 aagtcatcatctttcttgtgcaagtctctgtatccgtaccttgcgacgcaacggaacatg 2002 Query: 608 tgaaagttctttggcccaatcct 630 || || || ||||| |||||||| Sbjct: 2001 tggaaattttttggaccaatcct 1979
>gb|AY099600.1| Arabidopsis thaliana putative potassium transporter (At2g35060) mRNA, complete cds Length = 2614 Score = 46.1 bits (23), Expect = 0.15 Identities = 68/83 (81%) Strand = Plus / Minus Query: 548 aagtcatcatgcttcttgtgaatgtccttgtacccgtacctcgtgacacagcggaacatg 607 |||||||||| |||||||| | ||| |||| |||||||| | ||| || ||||||||| Sbjct: 2054 aagtcatcatctttcttgtgcaagtctctgtatccgtaccttgcgacgcaacggaacatg 1995 Query: 608 tgaaagttctttggcccaatcct 630 || || || ||||| |||||||| Sbjct: 1994 tggaaattttttggaccaatcct 1972
>gb|BT002147.1| Arabidopsis thaliana putative potassium transporter (At2g35060) mRNA, complete cds Length = 2469 Score = 46.1 bits (23), Expect = 0.15 Identities = 68/83 (81%) Strand = Plus / Minus Query: 548 aagtcatcatgcttcttgtgaatgtccttgtacccgtacctcgtgacacagcggaacatg 607 |||||||||| |||||||| | ||| |||| |||||||| | ||| || ||||||||| Sbjct: 1919 aagtcatcatctttcttgtgcaagtctctgtatccgtaccttgcgacgcaacggaacatg 1860 Query: 608 tgaaagttctttggcccaatcct 630 || || || ||||| |||||||| Sbjct: 1859 tggaaattttttggaccaatcct 1837
>gb|AC008277.4| Homo sapiens BAC clone RP11-311B14 from 2, complete sequence Length = 177089 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 17 gccctacacaagtacacagta 37 ||||||||||||||||||||| Sbjct: 138656 gccctacacaagtacacagta 138676
>emb|CR956377.9| Pig DNA sequence from clone PigE-220E19 on chromosome 7, complete sequence Length = 222390 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 466 gaagtcctcagaatcagaata 486 ||||||||||||||||||||| Sbjct: 51560 gaagtcctcagaatcagaata 51540
>emb|CR956388.7| Pig DNA sequence from clone PigI-736G5 on chromosome 7, complete sequence Length = 151383 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 466 gaagtcctcagaatcagaata 486 ||||||||||||||||||||| Sbjct: 81147 gaagtcctcagaatcagaata 81127
>emb|AL592044.4| Human DNA sequence from clone RP13-407F1 on chromosome 13, complete sequence Length = 236130 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 368 atggaggaatcatgtgatgag 388 ||||||||||||||||||||| Sbjct: 187563 atggaggaatcatgtgatgag 187543
>gb|AC035249.7|AC035249 Arabidopsis thaliana chromosome 1 BAC F8D11 genomic sequence, complete sequence Length = 109431 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 172 gaggaaggcatacaggtgatccaca 196 |||||||||||| |||||||||||| Sbjct: 21920 gaggaaggcatataggtgatccaca 21896
>gb|AC069557.5|AC069557 Genomic Sequence For Arabidopsis thaliana Clone T29A4 From Chromosome V, complete sequence Length = 121501 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 172 gaggaaggcatacaggtgatccaca 196 |||||||||||| |||||||||||| Sbjct: 68147 gaggaaggcatataggtgatccaca 68171
>dbj|AP002054.1| Arabidopsis thaliana genomic DNA, chromosome 3, BAC clone: T15D2 Length = 87219 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 172 gaggaaggcatacaggtgatccaca 196 |||||||||||| |||||||||||| Sbjct: 12407 gaggaaggcatataggtgatccaca 12383
>dbj|AB046438.1| Arabidopsis thaliana DNA, chromosome 5 centromere region, clone:T3E2 Length = 77204 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 172 gaggaaggcatacaggtgatccaca 196 |||||||||||| |||||||||||| Sbjct: 24264 gaggaaggcatataggtgatccaca 24240
>dbj|AB085948.1| Eleocharis vivipara pep1 mRNA for phosphoenolpyruvate carboxylase, complete cds Length = 3303 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 353 gacttggccagcacaatggag 373 ||||||||||||||||||||| Sbjct: 395 gacttggccagcacaatggag 375
>gb|AC165139.11| Mus musculus chromosome 5, clone RP23-424H17, complete sequence Length = 176075 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 460 catggtgaagtcctcagaatc 480 ||||||||||||||||||||| Sbjct: 69649 catggtgaagtcctcagaatc 69669
>ref|NM_111071.1| Arabidopsis thaliana KUP3; potassium ion transporter AT3G02050 (KUP3) mRNA, complete cds Length = 2656 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 566 tgaatgtccttgtacccgtacctc 589 |||||||||||||| ||||||||| Sbjct: 1931 tgaatgtccttgtaaccgtacctc 1908
>gb|BC082530.1| Xenopus laevis cDNA clone IMAGE:7007811 Length = 3198 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 620 ggcccaatcctcttcatgat 639 |||||||||||||||||||| Sbjct: 1696 ggcccaatcctcttcatgat 1715
>ref|XM_952341.1| Neurospora crassa OR74A hypothetical protein (NCU07209.1) partial mRNA Length = 987 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 346 tgttggcgacttggccagca 365 |||||||||||||||||||| Sbjct: 259 tgttggcgacttggccagca 240
>ref|XM_327494.1| Neurospora crassa OR74A hypothetical protein (NCU07209.1) partial mRNA Length = 987 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 346 tgttggcgacttggccagca 365 |||||||||||||||||||| Sbjct: 259 tgttggcgacttggccagca 240
>gb|AF534914.1| Pseudomonas putida OrcA (orcA) gene, partial cds; OrcB (orcB), OrcC (orcC), and OrcD (orcD) genes, complete cds; and OrcF (orcF) gene, partial cds Length = 4302 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 239 atggtgttgccgaggatgtgcacg 262 |||| ||||||||||||||||||| Sbjct: 2377 atggagttgccgaggatgtgcacg 2354
>gb|AC011664.10|ATAC011664 Arabidopsis thaliana chromosome III BAC F1C9 genomic sequence, complete sequence Length = 103960 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 566 tgaatgtccttgtacccgtacctc 589 |||||||||||||| ||||||||| Sbjct: 55758 tgaatgtccttgtaaccgtacctc 55781
>gb|U41528.2| Caenorhabditis elegans cosmid C15C7, complete sequence Length = 41627 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 625 aatcctcttcatgataaacc 644 |||||||||||||||||||| Sbjct: 21143 aatcctcttcatgataaacc 21124
>emb|AL163279.2|HS21C079 Homo sapiens chromosome 21 segment HS21C079 Length = 340000 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 gaaccaaaagaacagaagaa 74 |||||||||||||||||||| Sbjct: 73345 gaaccaaaagaacagaagaa 73364
>gb|AC112771.6| Homo sapiens 3 BAC RP11-144C9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 35638 Score = 40.1 bits (20), Expect = 9.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 485 tagccatccatcatgctctcaagtctca 512 ||||||||||||| ||||||||| |||| Sbjct: 1262 tagccatccatcaagctctcaagcctca 1235
>gb|AC092978.10| Homo sapiens 3 BAC RP11-340E6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 58001 Score = 40.1 bits (20), Expect = 9.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 485 tagccatccatcatgctctcaagtctca 512 ||||||||||||| ||||||||| |||| Sbjct: 57368 tagccatccatcaagctctcaagcctca 57341
>emb|BX294027.1|NCB8G12 Neurospora crassa DNA linkage group V BAC contig B8G12 Length = 154038 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 346 tgttggcgacttggccagca 365 |||||||||||||||||||| Sbjct: 40506 tgttggcgacttggccagca 40525
>emb|AL009194.1|DMC152A3 Drosophila melanogaster cosmid clone 152A3 Length = 24604 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 431 ttggtggatctctggacctt 450 |||||||||||||||||||| Sbjct: 6708 ttggtggatctctggacctt 6727
>emb|AJ720834.1| Gallus gallus mRNA for hypothetical protein, clone 27f19 Length = 2274 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 539 atcttctcgaagtcatcatgcttc 562 ||||||||||||||||||| |||| Sbjct: 459 atcttctcgaagtcatcatccttc 436
>gb|AC099787.2| Homo sapiens chromosome 1 clone RP4-538N4, complete sequence Length = 177329 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 360 ccagcacaatggaggaatca 379 |||||||||||||||||||| Sbjct: 143821 ccagcacaatggaggaatca 143802
>dbj|AK095157.1| Homo sapiens cDNA FLJ37838 fis, clone BRSSN2010830 Length = 2432 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 acaggtgatccacaacaatc 202 |||||||||||||||||||| Sbjct: 877 acaggtgatccacaacaatc 896
>gb|AC157524.2| Pan troglodytes BAC clone CH251-516K17 from chromosome unknown, complete sequence Length = 204622 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 gaaccaaaagaacagaagaa 74 |||||||||||||||||||| Sbjct: 203578 gaaccaaaagaacagaagaa 203559
>gb|AC104146.4| Drosophila melanogaster X BAC RP98-32O19 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 177724 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 431 ttggtggatctctggacctt 450 |||||||||||||||||||| Sbjct: 143482 ttggtggatctctggacctt 143501
>gb|AC104149.6| Drosophila melanogaster X BAC RP98-48O22 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 193714 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 431 ttggtggatctctggacctt 450 |||||||||||||||||||| Sbjct: 2420 ttggtggatctctggacctt 2439
>gb|AY062747.1| Arabidopsis thaliana putative potassium transporter (F1C9.17) mRNA, complete cds Length = 2779 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 566 tgaatgtccttgtacccgtacctc 589 |||||||||||||| ||||||||| Sbjct: 2013 tgaatgtccttgtaaccgtacctc 1990
>emb|CR478323.2| Mouse DNA sequence from clone WI1-1055K5 on chromosome X, complete sequence Length = 35468 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 507 gtctcacaaagatcaggagcctgt 530 |||||| ||||||||||||||||| Sbjct: 15754 gtctcataaagatcaggagcctgt 15777
>gb|AC110377.5| Mus musculus BAC clone RP23-460A13 from chromosome 12, complete sequence Length = 196540 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 32 acagtactgctcactctgaa 51 |||||||||||||||||||| Sbjct: 63642 acagtactgctcactctgaa 63661
>gb|AC016583.8| Homo sapiens chromosome 5 clone CTD-2591A1, complete sequence Length = 184769 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 acaggtgatccacaacaatc 202 |||||||||||||||||||| Sbjct: 61700 acaggtgatccacaacaatc 61719
>emb|BX822216.1|CNS0A4RD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB20ZA06 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2630 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 566 tgaatgtccttgtacccgtacctc 589 |||||||||||||| ||||||||| Sbjct: 1917 tgaatgtccttgtaaccgtacctc 1894
>gb|AC155175.3| Pan troglodytes BAC clone CH251-72L14 from chromosome unknown, complete sequence Length = 171893 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 gaaccaaaagaacagaagaa 74 |||||||||||||||||||| Sbjct: 130581 gaaccaaaagaacagaagaa 130600
>gb|AC113610.4| Homo sapiens BAC clone RP11-373H2 from 2, complete sequence Length = 96559 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 547 gaagtcatcatgcttcttgt 566 |||||||||||||||||||| Sbjct: 31699 gaagtcatcatgcttcttgt 31718
>gb|BT003375.1| Arabidopsis thaliana putative potassium transporter (At3g02050) mRNA, complete cds Length = 2534 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 566 tgaatgtccttgtacccgtacctc 589 |||||||||||||| ||||||||| Sbjct: 1814 tgaatgtccttgtaaccgtacctc 1791
>gb|AF129408.4| Homo sapiens chromosome 21 clone RP1-31K18 map q22.2, complete sequence Length = 141843 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 gaaccaaaagaacagaagaa 74 |||||||||||||||||||| Sbjct: 65231 gaaccaaaagaacagaagaa 65250
>dbj|BS000164.1| Pan troglodytes chromosome 22 clone:RP43-027I07, map 22, complete sequences Length = 152825 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 gaaccaaaagaacagaagaa 74 |||||||||||||||||||| Sbjct: 74439 gaaccaaaagaacagaagaa 74458
>gb|AF207621.2|AF207621 Arabidopsis thaliana potassium transporter KUP3p (KUP3) mRNA, complete cds Length = 2697 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 566 tgaatgtccttgtacccgtacctc 589 |||||||||||||| ||||||||| Sbjct: 1934 tgaatgtccttgtaaccgtacctc 1911
>emb|AL954224.1|PT270D20 Pan troglodytes chromosome 22 BAC PTB-270D20, complete sequence Length = 192642 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 gaaccaaaagaacagaagaa 74 |||||||||||||||||||| Sbjct: 164304 gaaccaaaagaacagaagaa 164323
>ref|NM_001005830.1| Gallus gallus mitogen-activated protein kinase kinase 1 (MAP2K1), mRNA Length = 2274 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 539 atcttctcgaagtcatcatgcttc 562 ||||||||||||||||||| |||| Sbjct: 459 atcttctcgaagtcatcatccttc 436
>gb|AE003423.2| Drosophila melanogaster chromosome X, section 7 of 74 of the complete sequence Length = 292830 Score = 40.1 bits (20), Expect = 9.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 431 ttggtggatctctggacctt 450 |||||||||||||||||||| Sbjct: 103161 ttggtggatctctggacctt 103180
>gb|AC117767.13| Mus musculus chromosome 1, clone RP24-507O16, complete sequence Length = 192892 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 105 ggcctacgttgagaaggctttcat 128 ||||||| |||||||||||||||| Sbjct: 163509 ggcctacattgagaaggctttcat 163532
>gb|AC131682.4| Mus musculus BAC clone RP23-355L3 from chromosome unknown, complete sequence Length = 196773 Score = 40.1 bits (20), Expect = 9.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 507 gtctcacaaagatcaggagcctgt 530 |||||| ||||||||||||||||| Sbjct: 172099 gtctcataaagatcaggagcctgt 172076 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,277,531 Number of Sequences: 3902068 Number of extensions: 5277531 Number of successful extensions: 91889 Number of sequences better than 10.0: 63 Number of HSP's better than 10.0 without gapping: 63 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 91670 Number of HSP's gapped (non-prelim): 205 length of query: 660 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 637 effective length of database: 17,143,297,704 effective search space: 10920280637448 effective search space used: 10920280637448 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)