| Clone Name | rbags11j09 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | MCM6_ANOGA (Q7Q0Q1) DNA replication licensing factor Mcm6 | 29 | 3.4 | 2 | IF2B_PYRFU (Q8U3I5) Translation initiation factor 2 beta subunit... | 28 | 5.7 | 3 | AOFB_CAVPO (P58028) Amine oxidase [flavin-containing] B (EC 1.4.... | 27 | 9.8 |
|---|
>MCM6_ANOGA (Q7Q0Q1) DNA replication licensing factor Mcm6| Length = 814 Score = 28.9 bits (63), Expect = 3.4 Identities = 17/55 (30%), Positives = 27/55 (49%) Frame = -3 Query: 269 EHESLIEKSYQAEELVHGKTYWAIEQVEMAKESASLILSRLTDV*KVLQKLKHHD 105 E E L + EL++ W + QVE ES ++ R + KV+ +L +HD Sbjct: 728 ESEELDREGISKTELIN----WYLSQVEDQLESVEELMERKVLIEKVIDRLIYHD 778
>IF2B_PYRFU (Q8U3I5) Translation initiation factor 2 beta subunit (eIF-2-beta)| (aIF2-beta) Length = 140 Score = 28.1 bits (61), Expect = 5.7 Identities = 15/60 (25%), Positives = 29/60 (48%), Gaps = 2/60 (3%) Frame = -3 Query: 281 LDFDEHESLIEKSYQ--AEELVHGKTYWAIEQVEMAKESASLILSRLTDV*KVLQKLKHH 108 +D+ ++E L+EK+YQ E + H K+ + + + E I+ D+ L + H Sbjct: 3 IDYYDYEKLLEKAYQELPENVKHHKSRFEVPGALVTIEGNKTIIENFKDIADALNRDPQH 62
>AOFB_CAVPO (P58028) Amine oxidase [flavin-containing] B (EC 1.4.3.4)| (Monoamine oxidase type B) (MAO-B) Length = 519 Score = 27.3 bits (59), Expect = 9.8 Identities = 11/23 (47%), Positives = 17/23 (73%) Frame = +1 Query: 37 VNQSFESVTVTSIKHGIYEERYV 105 ++Q+ ESV V ++ H IYE +YV Sbjct: 237 IDQTGESVLVETLNHEIYEAKYV 259 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 36,543,897 Number of Sequences: 219361 Number of extensions: 586431 Number of successful extensions: 1276 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 1266 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1276 length of database: 80,573,946 effective HSP length: 85 effective length of database: 61,928,261 effective search space used: 1486278264 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)