| Clone Name | rbags11j06 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF129479.1| Hordeum vulgare subsp. vulgare cultivar Albacete HAK2 (HAK2) mRNA, complete cds Length = 2840 Score = 1195 bits (603), Expect = 0.0 Identities = 619/623 (99%), Gaps = 1/623 (0%) Strand = Plus / Minus Query: 1 aatgaagttactgacaagtcacaggcaaagaatgttggaacttagtagctgtagattgta 60 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 2837 aatgaagttactgacaag-cacaggcaaagaatgttggaacttagtagctgtagattgta 2779 Query: 61 ctagtaatgatgtttaactatcatgaactgaaagtctaaaacgtggtgtatttacatgtt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2778 ctagtaatgatgtttaactatcatgaactgaaagtctaaaacgtggtgtatttacatgtt 2719 Query: 121 cgccgaagccccggaaatcagaacggtggcagcttagcctgttcggccggccaccgaaca 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2718 cgccgaagccccggaaatcagaacggtggcagcttagcctgttcggccggccaccgaaca 2659 Query: 181 tctttacatcgcctgaaagctcggcgacactaacaggcatccaaaagaactgacgaaaaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2658 tctttacatcgcctgaaagctcggcgacactaacaggcatccaaaagaactgacgaaaaa 2599 Query: 241 ttacactaaacgtagtagatcatgccgacctcgatgaggctgatgtggggtatgtgcagc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2598 ttacactaaacgtagtagatcatgccgacctcgatgaggctgatgtggggtatgtgcagc 2539 Query: 301 gtcaccgatgggcccctgcagttcttgcgaaggaacgagtaggcgtagtcgatggcgaac 360 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2538 gtcaccgacgggcccctgcagttcttgcgaaggaacgagtaggcgtagtcgatggcgaac 2479 Query: 361 gacttcaagaagttggagttcttcctcgccttcacgtaggagtggccaatgatgtacgcc 420 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 2478 gacttcaagaagttggagttcttcctcgccttcacgtaggagtggccgatgatgtacgcc 2419 Query: 421 acgccggcctccttcgcctccaagaggtccgacagctcgtcacgcacctgcgggttgacc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2418 acgccggcctccttcgcctccaagaggtccgacagctcgtcacgcacctgcgggttgacc 2359 Query: 481 tgctcctcctcggcgatctggaaacggacccttcggcggctcaggctgcccgactcctgc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2358 tgctcctcctcggcgatctggaaacggacccttcggcggctcaggctgcccgactcctgc 2299 Query: 541 tcgtagatggactgcaggctctggagggtctccgacttgctgctcctggtcagggaggtg 600 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 2298 tcgtagatggactgcaggctctggagggtccccgacttgctgctcctggtcagggaggtg 2239 Query: 601 ccttcgttggagtctctcatgac 623 ||||||||||||||||||||||| Sbjct: 2238 ccttcgttggagtctctcatgac 2216
>dbj|AB256661.1| Phragmites australis PhaHAK3 mRNA for potassium transporter, complete cds, strain: Enchi Length = 2251 Score = 462 bits (233), Expect = e-127 Identities = 324/353 (91%), Gaps = 6/353 (1%) Strand = Plus / Minus Query: 250 acgtagtagatcatgccgacctcgatgaggctgatgtggggtatgtgcagcgtcaccgat 309 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 2194 acgtagtagatcatgccgacctcgatgaggctgatgtgggggatgtgcagcgtcaccgac 2135 Query: 310 gggcccctgcagttcttgcgaaggaacgagtaggcgtagtcgatggcgaacgacttcaag 369 ||||| |||||||||||||| ||||||||||||||||||||||||||||||| ||| | | Sbjct: 2134 gggcctctgcagttcttgcggaggaacgagtaggcgtagtcgatggcgaacgtcttgagg 2075 Query: 370 aagttggagttcttcctcgccttcacgtaggagtggccaatgatgtacgccacgccggcc 429 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 2074 aagttggagttcttcctcgccttcacgtacgagtggccgatgatgtacgccacgccggcc 2015 Query: 430 tccttcgcctccaagaggtccgacagctcgtcacgcacctgcgggttgacctgctcctcc 489 ||||||||||||| |||||| ||||||||||| ||||||||||||| | || |||||||| Sbjct: 2014 tccttcgcctccaggaggtcggacagctcgtcccgcacctgcgggtcggcccgctcctcc 1955 Query: 490 tcggcgatctggaaacggaccct---tcggcggctcaggctg---cccgactcctgctcg 543 |||| ||||||||| || ||||| ||||||||||||| | ||||||||||||||| Sbjct: 1954 tcggagatctggaaccgcaccctccgccggcggctcaggccgccccccgactcctgctcg 1895 Query: 544 tagatggactgcaggctctggagggtctccgacttgctgctcctggtcaggga 596 |||||||||||||||||| |||| ||||||||||||||||||| ||||||||| Sbjct: 1894 tagatggactgcaggctccggagcgtctccgacttgctgctccgggtcaggga 1842
>dbj|AB256660.1| Phragmites australis PhaHAK3 mRNA for potassium transporter, complete cds, strain: Nanpi Length = 2423 Score = 462 bits (233), Expect = e-127 Identities = 324/353 (91%), Gaps = 6/353 (1%) Strand = Plus / Minus Query: 250 acgtagtagatcatgccgacctcgatgaggctgatgtggggtatgtgcagcgtcaccgat 309 ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 2366 acgtaatagatcatgccgacctcgatgaggctgatgtgggggatgtgcagcgtcaccgac 2307 Query: 310 gggcccctgcagttcttgcgaaggaacgagtaggcgtagtcgatggcgaacgacttcaag 369 |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| | | Sbjct: 2306 gggcccctgcagttcttgcggaggaacgagtaggcgtagtcgatggcgaacgtcttgagg 2247 Query: 370 aagttggagttcttcctcgccttcacgtaggagtggccaatgatgtacgccacgccggcc 429 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 2246 aagttggagttcttcctcgccttcacgtacgagtggccgatgatgtacgccacgccggcc 2187 Query: 430 tccttcgcctccaagaggtccgacagctcgtcacgcacctgcgggttgacctgctcctcc 489 ||||||||||||| |||||| ||||||||||| ||||||||||||| | || |||||||| Sbjct: 2186 tccttcgcctccaggaggtcggacagctcgtcccgcacctgcgggtcggcccgctcctcc 2127 Query: 490 tcggcgatctggaaacggaccct---tcggcggctcaggctg---cccgactcctgctcg 543 |||| ||||||||| || ||||| ||||||||||||| | ||||||||||||||| Sbjct: 2126 tcggagatctggaaccgcaccctccgccggcggctcaggccgccccccgactcctgctcg 2067 Query: 544 tagatggactgcaggctctggagggtctccgacttgctgctcctggtcaggga 596 |||||||||||||||||| |||| ||||||||||||||||||| ||||||||| Sbjct: 2066 tagatggactgcaggctccggagcgtctccgacttgctgctccgggtcaggga 2014
>dbj|AB256659.1| Phragmites australis PhaHAK3 mRNA for potassium transporter, complete cds, strain: Utsunomiya Length = 2431 Score = 446 bits (225), Expect = e-122 Identities = 322/353 (91%), Gaps = 6/353 (1%) Strand = Plus / Minus Query: 250 acgtagtagatcatgccgacctcgatgaggctgatgtggggtatgtgcagcgtcaccgat 309 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 2372 acgtagtagatcatgccgacctcgatgaggctgatgtgggggatgtgcagcgtcaccgac 2313 Query: 310 gggcccctgcagttcttgcgaaggaacgagtaggcgtagtcgatggcgaacgacttcaag 369 |||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| | | Sbjct: 2312 gggcccctgcagttcttgcggaggaacgagtaggcgtagtcgatggcgaacgtcttgagg 2253 Query: 370 aagttggagttcttcctcgccttcacgtaggagtggccaatgatgtacgccacgccggcc 429 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 2252 aagttggagttcttcctcgccttcacgtacgagtggccgatgatgtacgccacgccggcc 2193 Query: 430 tccttcgcctccaagaggtccgacagctcgtcacgcacctgcgggttgacctgctcctcc 489 ||||||||||||| ||| || ||||||||||| ||||||||||||| | || |||||||| Sbjct: 2192 tccttcgcctccaggagatcggacagctcgtcccgcacctgcgggtcggcccgctcctcc 2133 Query: 490 tcggcgatctggaaacggaccct---tcggcggctcaggctg---cccgactcctgctcg 543 |||| ||||||||| | ||||| ||||||||||||| | ||||||||||||||| Sbjct: 2132 tcggagatctggaactgcaccctccgccggcggctcaggccgccccccgactcctgctcg 2073 Query: 544 tagatggactgcaggctctggagggtctccgacttgctgctcctggtcaggga 596 |||||||||||||||||| ||| ||||||||||||||||||| ||||||||| Sbjct: 2072 tagatggactgcaggctccagagcgtctccgacttgctgctccgggtcaggga 2020
>ref|XM_479449.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2346 Score = 325 bits (164), Expect = 1e-85 Identities = 307/354 (86%), Gaps = 3/354 (0%) Strand = Plus / Minus Query: 253 tagtagatcatgccgacctcgatgaggctgatgtggggtatgtgcagcgtcaccgatggg 312 ||||||||||||||||| |||| |||||| ||||||||||||||||||| ||||| || Sbjct: 2339 tagtagatcatgccgacttcgacgaggctaatgtggggtatgtgcagcgccaccgcggga 2280 Query: 313 cccctgcagttcttgcgaaggaacgagtaggcgtagtcgatggcgaacgacttcaagaag 372 ||||||||||||||||| ||||||||||| ||||||||||||||||||| ||| | |||| Sbjct: 2279 cccctgcagttcttgcggaggaacgagtaagcgtagtcgatggcgaacgtcttgaggaag 2220 Query: 373 ttggagttcttcctcgccttcacgtaggagtggccaatgatgtacgccacgccggcctcc 432 |||||||||||||| |||||||||||||||||||| |||||||| | ||||||||||||| Sbjct: 2219 ttggagttcttccttgccttcacgtaggagtggccgatgatgtaagtcacgccggcctcc 2160 Query: 433 ttcgcctccaagaggtccgacagctcgtcacgcacctgcgggttgacctgctcctcctcg 492 || || |||| ||| || | ||||||||| |||||||| |||| || | |||||||||| Sbjct: 2159 ttggcgtccaggagatcagccagctcgtcccgcacctgggggtcgatccgctcctcctcc 2100 Query: 493 gcgatctggaaacggaccct---tcggcggctcaggctgcccgactcctgctcgtagatg 549 || |||| |||||||| || || ||||| || || || |||||||||||||||||| Sbjct: 2099 gcaatctcaaaacggactctgcgacgccggctgagactaccggactcctgctcgtagatg 2040 Query: 550 gactgcaggctctggagggtctccgacttgctgctcctggtcagggaggtgcct 603 ||||| |||||| |||| ||||||||| |||||||||| |||||||| |||||| Sbjct: 2039 gactggaggctccggagcgtctccgacctgctgctccttgtcagggacgtgcct 1986
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 325 bits (164), Expect = 1e-85 Identities = 307/354 (86%), Gaps = 3/354 (0%) Strand = Plus / Plus Query: 253 tagtagatcatgccgacctcgatgaggctgatgtggggtatgtgcagcgtcaccgatggg 312 ||||||||||||||||| |||| |||||| ||||||||||||||||||| ||||| || Sbjct: 28258904 tagtagatcatgccgacttcgacgaggctaatgtggggtatgtgcagcgccaccgcggga 28258963 Query: 313 cccctgcagttcttgcgaaggaacgagtaggcgtagtcgatggcgaacgacttcaagaag 372 ||||||||||||||||| ||||||||||| ||||||||||||||||||| ||| | |||| Sbjct: 28258964 cccctgcagttcttgcggaggaacgagtaagcgtagtcgatggcgaacgtcttgaggaag 28259023 Query: 373 ttggagttcttcctcgccttcacgtaggagtggccaatgatgtacgccacgccggcctcc 432 |||||||||||||| |||||||||||||||||||| |||||||| | ||||||||||||| Sbjct: 28259024 ttggagttcttccttgccttcacgtaggagtggccgatgatgtaagtcacgccggcctcc 28259083 Query: 433 ttcgcctccaagaggtccgacagctcgtcacgcacctgcgggttgacctgctcctcctcg 492 || || |||| ||| || | ||||||||| |||||||| |||| || | |||||||||| Sbjct: 28259084 ttggcgtccaggagatcagccagctcgtcccgcacctgggggtcgatccgctcctcctcc 28259143 Query: 493 gcgatctggaaacggaccct---tcggcggctcaggctgcccgactcctgctcgtagatg 549 || |||| |||||||| || || ||||| || || || |||||||||||||||||| Sbjct: 28259144 gcaatctcaaaacggactctgcgacgccggctgagactaccggactcctgctcgtagatg 28259203 Query: 550 gactgcaggctctggagggtctccgacttgctgctcctggtcagggaggtgcct 603 ||||| |||||| |||| ||||||||| |||||||||| |||||||| |||||| Sbjct: 28259204 gactggaggctccggagcgtctccgacctgctgctccttgtcagggacgtgcct 28259257
>dbj|AP004570.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0625E02 Length = 153921 Score = 325 bits (164), Expect = 1e-85 Identities = 307/354 (86%), Gaps = 3/354 (0%) Strand = Plus / Plus Query: 253 tagtagatcatgccgacctcgatgaggctgatgtggggtatgtgcagcgtcaccgatggg 312 ||||||||||||||||| |||| |||||| ||||||||||||||||||| ||||| || Sbjct: 114449 tagtagatcatgccgacttcgacgaggctaatgtggggtatgtgcagcgccaccgcggga 114508 Query: 313 cccctgcagttcttgcgaaggaacgagtaggcgtagtcgatggcgaacgacttcaagaag 372 ||||||||||||||||| ||||||||||| ||||||||||||||||||| ||| | |||| Sbjct: 114509 cccctgcagttcttgcggaggaacgagtaagcgtagtcgatggcgaacgtcttgaggaag 114568 Query: 373 ttggagttcttcctcgccttcacgtaggagtggccaatgatgtacgccacgccggcctcc 432 |||||||||||||| |||||||||||||||||||| |||||||| | ||||||||||||| Sbjct: 114569 ttggagttcttccttgccttcacgtaggagtggccgatgatgtaagtcacgccggcctcc 114628 Query: 433 ttcgcctccaagaggtccgacagctcgtcacgcacctgcgggttgacctgctcctcctcg 492 || || |||| ||| || | ||||||||| |||||||| |||| || | |||||||||| Sbjct: 114629 ttggcgtccaggagatcagccagctcgtcccgcacctgggggtcgatccgctcctcctcc 114688 Query: 493 gcgatctggaaacggaccct---tcggcggctcaggctgcccgactcctgctcgtagatg 549 || |||| |||||||| || || ||||| || || || |||||||||||||||||| Sbjct: 114689 gcaatctcaaaacggactctgcgacgccggctgagactaccggactcctgctcgtagatg 114748 Query: 550 gactgcaggctctggagggtctccgacttgctgctcctggtcagggaggtgcct 603 ||||| |||||| |||| ||||||||| |||||||||| |||||||| |||||| Sbjct: 114749 gactggaggctccggagcgtctccgacctgctgctccttgtcagggacgtgcct 114802
>emb|AJ427976.1|OSA427976 Oryza sativa HAK7 gene for putative potasium transporter, exons 1-8 Length = 5189 Score = 325 bits (164), Expect = 1e-85 Identities = 307/354 (86%), Gaps = 3/354 (0%) Strand = Plus / Minus Query: 253 tagtagatcatgccgacctcgatgaggctgatgtggggtatgtgcagcgtcaccgatggg 312 ||||||||||||||||| |||| |||||| ||||||||||||||||||| ||||| || Sbjct: 4686 tagtagatcatgccgacttcgacgaggctaatgtggggtatgtgcagcgccaccgcggga 4627 Query: 313 cccctgcagttcttgcgaaggaacgagtaggcgtagtcgatggcgaacgacttcaagaag 372 ||||||||||||||||| ||||||||||| ||||||||||||||||||| ||| | |||| Sbjct: 4626 cccctgcagttcttgcggaggaacgagtaagcgtagtcgatggcgaacgtcttgaggaag 4567 Query: 373 ttggagttcttcctcgccttcacgtaggagtggccaatgatgtacgccacgccggcctcc 432 |||||||||||||| |||||||||||||||||||| |||||||| | ||||||||||||| Sbjct: 4566 ttggagttcttccttgccttcacgtaggagtggccgatgatgtaagtcacgccggcctcc 4507 Query: 433 ttcgcctccaagaggtccgacagctcgtcacgcacctgcgggttgacctgctcctcctcg 492 || || |||| ||| || | ||||||||| |||||||| |||| || | |||||||||| Sbjct: 4506 ttggcgtccaggagatcagccagctcgtcccgcacctgggggtcgatccgctcctcctcc 4447 Query: 493 gcgatctggaaacggaccct---tcggcggctcaggctgcccgactcctgctcgtagatg 549 || |||| |||||||| || || ||||| || || || |||||||||||||||||| Sbjct: 4446 gcaatctcaaaacggactctgcgacgccggctgagactaccggactcctgctcgtagatg 4387 Query: 550 gactgcaggctctggagggtctccgacttgctgctcctggtcagggaggtgcct 603 ||||| |||||| |||| ||||||||| |||||||||| |||||||| |||||| Sbjct: 4386 gactggaggctccggagcgtctccgacctgctgctccttgtcagggacgtgcct 4333
>emb|AJ427971.1|OSA427971 Oryza sativa mRNA for putative potasium transporter (HAK7 gene) Length = 2436 Score = 325 bits (164), Expect = 1e-85 Identities = 307/354 (86%), Gaps = 3/354 (0%) Strand = Plus / Minus Query: 253 tagtagatcatgccgacctcgatgaggctgatgtggggtatgtgcagcgtcaccgatggg 312 ||||||||||||||||| |||| |||||| ||||||||||||||||||| ||||| || Sbjct: 2429 tagtagatcatgccgacttcgacgaggctaatgtggggtatgtgcagcgccaccgcggga 2370 Query: 313 cccctgcagttcttgcgaaggaacgagtaggcgtagtcgatggcgaacgacttcaagaag 372 ||||||||||||||||| ||||||||||| ||||||||||||||||||| ||| | |||| Sbjct: 2369 cccctgcagttcttgcggaggaacgagtaagcgtagtcgatggcgaacgtcttgaggaag 2310 Query: 373 ttggagttcttcctcgccttcacgtaggagtggccaatgatgtacgccacgccggcctcc 432 |||||||||||||| |||||||||||||||||||| |||||||| | ||||||||||||| Sbjct: 2309 ttggagttcttccttgccttcacgtaggagtggccgatgatgtaagtcacgccggcctcc 2250 Query: 433 ttcgcctccaagaggtccgacagctcgtcacgcacctgcgggttgacctgctcctcctcg 492 || || |||| ||| || | ||||||||| |||||||| |||| || | |||||||||| Sbjct: 2249 ttggcgtccaggagatcagccagctcgtcccgcacctgggggtcgatccgctcctcctcc 2190 Query: 493 gcgatctggaaacggaccct---tcggcggctcaggctgcccgactcctgctcgtagatg 549 || |||| |||||||| || || ||||| || || || |||||||||||||||||| Sbjct: 2189 gcaatctcaaaacggactctgcgacgccggctgagactaccggactcctgctcgtagatg 2130 Query: 550 gactgcaggctctggagggtctccgacttgctgctcctggtcagggaggtgcct 603 ||||| |||||| |||| ||||||||| |||||||||| |||||||| |||||| Sbjct: 2129 gactggaggctccggagcgtctccgacctgctgctccttgtcagggacgtgcct 2076
>dbj|AK059797.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-E12, full insert sequence Length = 1057 Score = 325 bits (164), Expect = 1e-85 Identities = 307/354 (86%), Gaps = 3/354 (0%) Strand = Plus / Minus Query: 253 tagtagatcatgccgacctcgatgaggctgatgtggggtatgtgcagcgtcaccgatggg 312 ||||||||||||||||| |||| |||||| ||||||||||||||||||| ||||| || Sbjct: 807 tagtagatcatgccgacttcgacgaggctaatgtggggtatgtgcagcgccaccgcggga 748 Query: 313 cccctgcagttcttgcgaaggaacgagtaggcgtagtcgatggcgaacgacttcaagaag 372 ||||||||||||||||| ||||||||||| ||||||||||||||||||| ||| | |||| Sbjct: 747 cccctgcagttcttgcggaggaacgagtaagcgtagtcgatggcgaacgtcttgaggaag 688 Query: 373 ttggagttcttcctcgccttcacgtaggagtggccaatgatgtacgccacgccggcctcc 432 |||||||||||||| |||||||||||||||||||| |||||||| | ||||||||||||| Sbjct: 687 ttggagttcttccttgccttcacgtaggagtggccgatgatgtaagtcacgccggcctcc 628 Query: 433 ttcgcctccaagaggtccgacagctcgtcacgcacctgcgggttgacctgctcctcctcg 492 || || |||| ||| || | ||||||||| |||||||| |||| || | |||||||||| Sbjct: 627 ttggcgtccaggagatcagccagctcgtcccgcacctgggggtcgatccgctcctcctcc 568 Query: 493 gcgatctggaaacggaccct---tcggcggctcaggctgcccgactcctgctcgtagatg 549 || |||| |||||||| || || ||||| || || || |||||||||||||||||| Sbjct: 567 gcaatctcaaaacggactctgcgacgccggctgagactaccggactcctgctcgtagatg 508 Query: 550 gactgcaggctctggagggtctccgacttgctgctcctggtcagggaggtgcct 603 ||||| |||||| |||| ||||||||| |||||||||| |||||||| |||||| Sbjct: 507 gactggaggctccggagcgtctccgacctgctgctccttgtcagggacgtgcct 454
>gb|AY104525.1| Zea mays PCO106353 mRNA sequence Length = 1115 Score = 65.9 bits (33), Expect = 1e-07 Identities = 81/97 (83%) Strand = Plus / Minus Query: 246 ctaaacgtagtagatcatgccgacctcgatgaggctgatgtggggtatgtgcagcgtcac 305 |||||| |||||||||||||| || || || || || ||||| || ||||||||||| || Sbjct: 842 ctaaacatagtagatcatgcccacttctatcagactaatgtgtggaatgtgcagcgtaac 783 Query: 306 cgatgggcccctgcagttcttgcgaaggaacgagtag 342 ||||| || ||||||||||| || ||||| |||||| Sbjct: 782 tgatggacctctgcagttcttccggaggaaagagtag 746
>dbj|AP003281.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0560B06 Length = 161720 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 245 actaaacgtagtagatcatgccgacctcgatgaggctgatgtg 287 |||| |||||||||||||||||||| ||||| ||||||||||| Sbjct: 150545 actagacgtagtagatcatgccgacttcgataaggctgatgtg 150587 Score = 54.0 bits (27), Expect = 6e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 380 tcttcctcgccttcacgtaggagtggccaatgatgtacgccacgccggcctccttcgcct 439 ||||||||||||| | ||| |||||||| |||||||| || |||||||| | ||| |||| Sbjct: 150680 tcttcctcgccttgatgtacgagtggcccatgatgtaggcgacgccggcgtgcttggcct 150739 Query: 440 cca 442 ||| Sbjct: 150740 cca 150742
>gb|AC011806.1|AC011806 Genomic Sequence For Oryza sativa Clone 10P20, Lemont Strain, Complete Sequence, complete sequence Length = 105198 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 245 actaaacgtagtagatcatgccgacctcgatgaggctgatgtg 287 |||| |||||||||||||||||||| ||||| ||||||||||| Sbjct: 88155 actagacgtagtagatcatgccgacttcgataaggctgatgtg 88197 Score = 54.0 bits (27), Expect = 6e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 380 tcttcctcgccttcacgtaggagtggccaatgatgtacgccacgccggcctccttcgcct 439 ||||||||||||| | ||| |||||||| |||||||| || |||||||| | ||| |||| Sbjct: 88290 tcttcctcgccttgatgtacgagtggcccatgatgtaggcgacgccggcgtgcttggcct 88349 Query: 440 cca 442 ||| Sbjct: 88350 cca 88352
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 245 actaaacgtagtagatcatgccgacctcgatgaggctgatgtg 287 |||| |||||||||||||||||||| ||||| ||||||||||| Sbjct: 15134493 actagacgtagtagatcatgccgacttcgataaggctgatgtg 15134535 Score = 54.0 bits (27), Expect = 6e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 380 tcttcctcgccttcacgtaggagtggccaatgatgtacgccacgccggcctccttcgcct 439 ||||||||||||| | ||| |||||||| |||||||| || |||||||| | ||| |||| Sbjct: 15134628 tcttcctcgccttgatgtacgagtggcccatgatgtaggcgacgccggcgtgcttggcct 15134687 Query: 440 cca 442 ||| Sbjct: 15134688 cca 15134690 Score = 46.1 bits (23), Expect = 0.14 Identities = 44/51 (86%) Strand = Plus / Minus Query: 292 atgtgcagcgtcaccgatgggcccctgcagttcttgcgaaggaacgagtag 342 |||||||| || |||||||| || ||||||||||| || ||||| |||||| Sbjct: 41058572 atgtgcagtgtgaccgatggacctctgcagttcttccggaggaaagagtag 41058522 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 7 gttactgacaagtcacaggcaaag 30 ||||||||||||| |||||||||| Sbjct: 4827573 gttactgacaagtgacaggcaaag 4827596
>dbj|AP003236.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0043B10 Length = 167399 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 245 actaaacgtagtagatcatgccgacctcgatgaggctgatgtg 287 |||| |||||||||||||||||||| ||||| ||||||||||| Sbjct: 106459 actagacgtagtagatcatgccgacttcgataaggctgatgtg 106501 Score = 54.0 bits (27), Expect = 6e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 380 tcttcctcgccttcacgtaggagtggccaatgatgtacgccacgccggcctccttcgcct 439 ||||||||||||| | ||| |||||||| |||||||| || |||||||| | ||| |||| Sbjct: 106594 tcttcctcgccttgatgtacgagtggcccatgatgtaggcgacgccggcgtgcttggcct 106653 Query: 440 cca 442 ||| Sbjct: 106654 cca 106656
>emb|AJ427974.1|OSA427974 Oryza sativa HAK3 gene for putative potasium transporter, exons 1-6 Length = 3777 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Minus Query: 245 actaaacgtagtagatcatgccgacctcgatgaggctgatgtg 287 |||| |||||||||||||||||||| ||||| ||||||||||| Sbjct: 3282 actagacgtagtagatcatgccgacttcgataaggctgatgtg 3240 Score = 54.0 bits (27), Expect = 6e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 380 tcttcctcgccttcacgtaggagtggccaatgatgtacgccacgccggcctccttcgcct 439 ||||||||||||| | ||| |||||||| |||||||| || |||||||| | ||| |||| Sbjct: 3147 tcttcctcgccttgatgtacgagtggcccatgatgtaggcgacgccggcgtgcttggcct 3088 Query: 440 cca 442 ||| Sbjct: 3087 cca 3085
>dbj|AK100340.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023081N10, full insert sequence Length = 2159 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Minus Query: 245 actaaacgtagtagatcatgccgacctcgatgaggctgatgtg 287 |||| |||||||||||||||||||| ||||| ||||||||||| Sbjct: 1947 actagacgtagtagatcatgccgacttcgataaggctgatgtg 1905 Score = 54.0 bits (27), Expect = 6e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 380 tcttcctcgccttcacgtaggagtggccaatgatgtacgccacgccggcctccttcgcct 439 ||||||||||||| | ||| |||||||| |||||||| || |||||||| | ||| |||| Sbjct: 1812 tcttcctcgccttgatgtacgagtggcccatgatgtaggcgacgccggcgtgcttggcct 1753 Query: 440 cca 442 ||| Sbjct: 1752 cca 1750
>ref|NM_193825.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2421 Score = 60.0 bits (30), Expect = 9e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 250 acgtagtagatcatgccgacctcgatgaggctgatgtg 287 |||||||||||||||||||| ||||| ||||||||||| Sbjct: 2417 acgtagtagatcatgccgacttcgataaggctgatgtg 2380 Score = 54.0 bits (27), Expect = 6e-04 Identities = 54/63 (85%) Strand = Plus / Minus Query: 380 tcttcctcgccttcacgtaggagtggccaatgatgtacgccacgccggcctccttcgcct 439 ||||||||||||| | ||| |||||||| |||||||| || |||||||| | ||| |||| Sbjct: 2287 tcttcctcgccttgatgtacgagtggcccatgatgtaggcgacgccggcgtgcttggcct 2228 Query: 440 cca 442 ||| Sbjct: 2227 cca 2225
>emb|AJ427293.1|CNO427293 Cymodocea nodosa mRNA for putative potassium transporter (hak2 gene) Length = 2613 Score = 50.1 bits (25), Expect = 0.009 Identities = 49/57 (85%) Strand = Plus / Minus Query: 532 gactcctgctcgtagatggactgcaggctctggagggtctccgacttgctgctcctg 588 |||||||||||||| | ||||||| |||||| | || |||||||||||||||||| Sbjct: 2122 gactcctgctcgtacagcgactgcaagctctgcaatgtttccgacttgctgctcctg 2066
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 48.1 bits (24), Expect = 0.035 Identities = 39/44 (88%) Strand = Plus / Plus Query: 388 gccttcacgtaggagtggccaatgatgtacgccacgccggcctc 431 ||||| |||||||||||||| | |||| |||||| ||||||||| Sbjct: 24854829 gccttgacgtaggagtggccgaggatgaacgccatgccggcctc 24854872 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 412 atgtacgccacgccggcctccttcgcctcca 442 ||||||| |||||||||||||||| |||||| Sbjct: 27443314 atgtacgacacgccggcctccttctcctcca 27443284
>dbj|AP004737.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0072A21 Length = 158287 Score = 48.1 bits (24), Expect = 0.035 Identities = 39/44 (88%) Strand = Plus / Plus Query: 388 gccttcacgtaggagtggccaatgatgtacgccacgccggcctc 431 ||||| |||||||||||||| | |||| |||||| ||||||||| Sbjct: 65912 gccttgacgtaggagtggccgaggatgaacgccatgccggcctc 65955
>emb|AJ427979.1|OSA427979 Oryza sativa HAK10 gene for putative potasium transporter, exons 1-9 Length = 5051 Score = 48.1 bits (24), Expect = 0.035 Identities = 39/44 (88%) Strand = Plus / Minus Query: 388 gccttcacgtaggagtggccaatgatgtacgccacgccggcctc 431 ||||| |||||||||||||| | |||| |||||| ||||||||| Sbjct: 4413 gccttgacgtaggagtggccgaggatgaacgccatgccggcctc 4370
>emb|AJ427972.1|OSA427972 Oryza sativa mRNA for putative potasium transporter (HAK10 gene) Length = 2532 Score = 48.1 bits (24), Expect = 0.035 Identities = 39/44 (88%) Strand = Plus / Minus Query: 388 gccttcacgtaggagtggccaatgatgtacgccacgccggcctc 431 ||||| |||||||||||||| | |||| |||||| ||||||||| Sbjct: 2390 gccttgacgtaggagtggccgaggatgaacgccatgccggcctc 2347
>dbj|AK107132.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-124-C06, full insert sequence Length = 1560 Score = 48.1 bits (24), Expect = 0.035 Identities = 39/44 (88%) Strand = Plus / Minus Query: 388 gccttcacgtaggagtggccaatgatgtacgccacgccggcctc 431 ||||| |||||||||||||| | |||| |||||| ||||||||| Sbjct: 1415 gccttgacgtaggagtggccgaggatgaacgccatgccggcctc 1372
>ref|NM_190057.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2352 Score = 46.1 bits (23), Expect = 0.14 Identities = 44/51 (86%) Strand = Plus / Minus Query: 292 atgtgcagcgtcaccgatgggcccctgcagttcttgcgaaggaacgagtag 342 |||||||| || |||||||| || ||||||||||| || ||||| |||||| Sbjct: 2306 atgtgcagtgtgaccgatggacctctgcagttcttccggaggaaagagtag 2256
>dbj|AP003266.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0492G09 Length = 142239 Score = 46.1 bits (23), Expect = 0.14 Identities = 44/51 (86%) Strand = Plus / Minus Query: 292 atgtgcagcgtcaccgatgggcccctgcagttcttgcgaaggaacgagtag 342 |||||||| || |||||||| || ||||||||||| || ||||| |||||| Sbjct: 95502 atgtgcagtgtgaccgatggacctctgcagttcttccggaggaaagagtag 95452
>dbj|AP005610.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0032M14 Length = 146636 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 412 atgtacgccacgccggcctccttcgcctcca 442 ||||||| |||||||||||||||| |||||| Sbjct: 12872 atgtacgacacgccggcctccttctcctcca 12842
>dbj|AP005192.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0485A07 Length = 166397 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 412 atgtacgccacgccggcctccttcgcctcca 442 ||||||| |||||||||||||||| |||||| Sbjct: 62383 atgtacgacacgccggcctccttctcctcca 62353
>dbj|AK111663.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013156F08, full insert sequence Length = 2751 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 412 atgtacgccacgccggcctccttcgcctcca 442 ||||||| |||||||||||||||| |||||| Sbjct: 2429 atgtacgacacgccggcctccttctcctcca 2399
>emb|AJ427982.1|OSA427982 Oryza sativa partial HAK13 gene for putative potasium transporter Length = 5989 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 412 atgtacgccacgccggcctccttcgcctcca 442 ||||||| |||||||||||||||| |||||| Sbjct: 5940 atgtacgacacgccggcctccttctcctcca 5910
>dbj|AK071411.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023091C23, full insert sequence Length = 2663 Score = 46.1 bits (23), Expect = 0.14 Identities = 44/51 (86%) Strand = Plus / Minus Query: 292 atgtgcagcgtcaccgatgggcccctgcagttcttgcgaaggaacgagtag 342 |||||||| || |||||||| || ||||||||||| || ||||| |||||| Sbjct: 2153 atgtgcagtgtgaccgatggacctctgcagttcttccggaggaaagagtag 2103
>dbj|AK070575.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023055A03, full insert sequence Length = 2941 Score = 46.1 bits (23), Expect = 0.14 Identities = 44/51 (86%) Strand = Plus / Minus Query: 292 atgtgcagcgtcaccgatgggcccctgcagttcttgcgaaggaacgagtag 342 |||||||| || |||||||| || ||||||||||| || ||||| |||||| Sbjct: 2405 atgtgcagtgtgaccgatggacctctgcagttcttccggaggaaagagtag 2355
>gb|AF083397.1|AF083397 Tribonema intermixtum 18S small subunit ribosomal RNA gene, partial sequence Length = 1830 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 517 cggctcaggctgcccgactcctg 539 ||||||||||||||||||||||| Sbjct: 675 cggctcaggctgcccgactcctg 697
>gb|U41648.1|BSU41648 Botrydium stoloniferum nuclear 18S ribosomal RNA gene Length = 1807 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 517 cggctcaggctgcccgactcctg 539 ||||||||||||||||||||||| Sbjct: 667 cggctcaggctgcccgactcctg 689
>ref|NM_111071.1| Arabidopsis thaliana KUP3; potassium ion transporter AT3G02050 (KUP3) mRNA, complete cds Length = 2656 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Minus Query: 247 taaacgtagtagatcatgccgacctcgatgaggctgatgtg 287 ||||| ||||| |||||||| || || |||||||||||||| Sbjct: 2486 taaacatagtaaatcatgccaacttcaatgaggctgatgtg 2446
>gb|AC011664.10|ATAC011664 Arabidopsis thaliana chromosome III BAC F1C9 genomic sequence, complete sequence Length = 103960 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 247 taaacgtagtagatcatgccgacctcgatgaggctgatgtg 287 ||||| ||||| |||||||| || || |||||||||||||| Sbjct: 55203 taaacatagtaaatcatgccaacttcaatgaggctgatgtg 55243
>gb|AC092733.18| Homo sapiens chromosome 11, clone RP11-193F22, complete sequence Length = 195538 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 569 tctccgacttgctgctcctgg 589 ||||||||||||||||||||| Sbjct: 174598 tctccgacttgctgctcctgg 174618
>gb|AY062747.1| Arabidopsis thaliana putative potassium transporter (F1C9.17) mRNA, complete cds Length = 2779 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Minus Query: 247 taaacgtagtagatcatgccgacctcgatgaggctgatgtg 287 ||||| ||||| |||||||| || || |||||||||||||| Sbjct: 2568 taaacatagtaaatcatgccaacttcaatgaggctgatgtg 2528
>emb|BX822216.1|CNS0A4RD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB20ZA06 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2630 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Minus Query: 247 taaacgtagtagatcatgccgacctcgatgaggctgatgtg 287 ||||| ||||| |||||||| || || |||||||||||||| Sbjct: 2471 taaacatagtaaatcatgccaacttcaatgaggctgatgtg 2431
>gb|BT003375.1| Arabidopsis thaliana putative potassium transporter (At3g02050) mRNA, complete cds Length = 2534 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Minus Query: 247 taaacgtagtagatcatgccgacctcgatgaggctgatgtg 287 ||||| ||||| |||||||| || || |||||||||||||| Sbjct: 2369 taaacatagtaaatcatgccaacttcaatgaggctgatgtg 2329
>gb|AF207621.2|AF207621 Arabidopsis thaliana potassium transporter KUP3p (KUP3) mRNA, complete cds Length = 2697 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Minus Query: 247 taaacgtagtagatcatgccgacctcgatgaggctgatgtg 287 ||||| ||||| |||||||| || || |||||||||||||| Sbjct: 2489 taaacatagtaaatcatgccaacttcaatgaggctgatgtg 2449
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 40.1 bits (20), Expect = 8.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 537 ctgctcgtagatggactgcaggctctggaggg 568 |||||| |||| || ||||||||||||||||| Sbjct: 1207711 ctgctcatagaggggctgcaggctctggaggg 1207680
>gb|AF053356.1| Homo sapiens chromosome 7q22 sequence, complete sequence Length = 227968 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 425 cggcctccttcgcctccaagaggt 448 |||||||||| ||||||||||||| Sbjct: 55657 cggcctccttggcctccaagaggt 55680
>gb|AC147079.4| Pan troglodytes BAC clone RP43-184E24 from 7, complete sequence Length = 218644 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 546 gatggactgcaggctctgga 565 |||||||||||||||||||| Sbjct: 9896 gatggactgcaggctctgga 9877
>ref|NM_000799.2| Homo sapiens erythropoietin (EPO), mRNA Length = 1340 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 425 cggcctccttcgcctccaagaggt 448 |||||||||| ||||||||||||| Sbjct: 329 cggcctccttggcctccaagaggt 306
>gb|AC122895.5| Mus musculus BAC clone RP23-69K14 from chromosome 18, complete sequence Length = 215539 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 tttaactatcatgaactgaa 92 |||||||||||||||||||| Sbjct: 199895 tttaactatcatgaactgaa 199914
>gb|AC132427.4| Mus musculus BAC clone RP23-326N11 from chromosome 18, complete sequence Length = 192806 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 tttaactatcatgaactgaa 92 |||||||||||||||||||| Sbjct: 33450 tttaactatcatgaactgaa 33469
>gb|AC069286.7| Homo sapiens BAC clone RP11-261N10 from 7, complete sequence Length = 157118 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 546 gatggactgcaggctctgga 565 |||||||||||||||||||| Sbjct: 143193 gatggactgcaggctctgga 143174
>gb|AY223810.1| Rhodococcus erythropolis linear plasmid pBD2, complete sequence Length = 210205 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 478 acctgctcctcctcggcgat 497 |||||||||||||||||||| Sbjct: 7826 acctgctcctcctcggcgat 7845
>gb|AC151275.3| Mus musculus BAC clone RP24-201F8 from chromosome 17, complete sequence Length = 190772 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 223 aaaagaactgacgaaaaattacac 246 ||||||||||| |||||||||||| Sbjct: 107650 aaaagaactgaggaaaaattacac 107673
>emb|AL645608.30| Human DNA sequence from clone RP11-54O7 on chromosome 1 Contains three novel genes, a novel gene (MGC45873), a novel gene (DKFZP564C186), a novel gene, a novel gene (DKFZP434H2010), a novel gene (MGC13275), the gene for bHLH factor Hes4 (Hes4), a ribosomal protein L39 (RPL39) pseudogene, a novel gene, the G1P2 gene for interferon alpha-inducible protein (clone IFI-15K), the AGRN gene for agrin, two novel genes and fifteen CpG islands, complete sequence Length = 186759 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 atgaggctgatgtggggtat 293 |||||||||||||||||||| Sbjct: 71550 atgaggctgatgtggggtat 71569
>gb|AY092017.1| Pongo pygmaeus erythropoietin gene, partial cds Length = 1395 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 425 cggcctccttcgcctccaagaggt 448 |||||||||| ||||||||||||| Sbjct: 43 cggcctccttggcctccaagaggt 20
>gb|AY092016.1| Gorilla gorilla erythropoietin gene, partial cds Length = 1392 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 425 cggcctccttcgcctccaagaggt 448 |||||||||| ||||||||||||| Sbjct: 43 cggcctccttggcctccaagaggt 20
>gb|AY092015.1| Pan troglodytes erythropoietin gene, partial cds Length = 1387 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 425 cggcctccttcgcctccaagaggt 448 |||||||||| ||||||||||||| Sbjct: 43 cggcctccttggcctccaagaggt 20
>gb|AC009124.8| Homo sapiens chromosome 16 clone RP11-489A11, complete sequence Length = 168268 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 taaaacgtggtgtatttaca 116 |||||||||||||||||||| Sbjct: 161205 taaaacgtggtgtatttaca 161186
>emb|BX004811.6| Zebrafish DNA sequence from clone BUSM1-118J2 in linkage group 3 Contains two novel genes similar to zebrafish ba2 (globin ba2), six novel genes for alpha-globins, two novel genes similar to zebrafish bE1 (embryonic 1 beta-globin), the zebrafish bE1 gene for embryonic 1 beta-globin and a novel gene, complete sequence Length = 80760 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 73 tttaactatcatgaactgaaagtc 96 |||||| ||||||||||||||||| Sbjct: 62609 tttaaccatcatgaactgaaagtc 62586
>emb|AL845551.2| Zebrafish DNA sequence from clone XX-119C3 Contains 3 novel genes for alpha-type globins and one novel gene for a beta-type globin, complete sequence Length = 40374 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 73 tttaactatcatgaactgaaagtc 96 |||||| ||||||||||||||||| Sbjct: 35498 tttaaccatcatgaactgaaagtc 35475
>gb|AC120780.32| Pan troglodytes clone rp43-22b16, complete sequence Length = 193047 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 97 taaaacgtggtgtatttaca 116 |||||||||||||||||||| Sbjct: 56402 taaaacgtggtgtatttaca 56421
>gb|AC005632.2| Homo sapiens BAC clone CTB-31N19 from 16, complete sequence Length = 200594 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 taaaacgtggtgtatttaca 116 |||||||||||||||||||| Sbjct: 112629 taaaacgtggtgtatttaca 112610
>gb|DQ360292.1| Mus musculus strain CAST/Ei C-X3-C chemokine receptor 1 (Cx3cr1), C-C motif chemokine receptor 8 (Ccr8), ribosomal protein SA (Rpsa), and myelin-associated oligodendrocytic basic protein (Mobp) genes, complete cds Length = 200011 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 472 gggttgacctgctcctcctc 491 |||||||||||||||||||| Sbjct: 152717 gggttgacctgctcctcctc 152698
>gb|DQ360291.1| Mus musculus strain SJL/J C-X3-C chemokine receptor 1 (Cx3cr1), C-C motif chemokine receptor 8 (Ccr8), ribosomal protein SA (Rpsa), and myelin-associated oligodendrocytic basic protein (Mobp) genes, complete cds Length = 144780 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 472 gggttgacctgctcctcctc 491 |||||||||||||||||||| Sbjct: 140559 gggttgacctgctcctcctc 140540
>ref|NM_001039364.1| Mus musculus myelin-associated oligodendrocytic basic protein (Mobp), transcript variant 2, mRNA Length = 2610 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 472 gggttgacctgctcctcctc 491 |||||||||||||||||||| Sbjct: 372 gggttgacctgctcctcctc 353
>ref|NM_008614.2| Mus musculus myelin-associated oligodendrocytic basic protein (Mobp), transcript variant 1, mRNA Length = 3286 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 472 gggttgacctgctcctcctc 491 |||||||||||||||||||| Sbjct: 371 gggttgacctgctcctcctc 352
>gb|S80184.1|S80182S3 {pseudogene} CA V=carbonic anhydrase V [human, lung fibroblast, Mitochondrial, 279 nt, segment 3 of 5] Length = 279 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 97 taaaacgtggtgtatttaca 116 |||||||||||||||||||| Sbjct: 33 taaaacgtggtgtatttaca 52
>dbj|AK013799.1| Mus musculus adult male hippocampus cDNA, RIKEN full-length enriched library, clone:2900076O11 product:myelin-associated oligodendrocytic basic protein, full insert sequence Length = 1477 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 472 gggttgacctgctcctcctc 491 |||||||||||||||||||| Sbjct: 372 gggttgacctgctcctcctc 353
>gb|S80240.1|S80175S5 CA V=carbonic anhydrase V [human, lung fibroblast, Genomic/mRNA, 300 nt, segment 5 of 7] Length = 300 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 97 taaaacgtggtgtatttaca 116 |||||||||||||||||||| Sbjct: 34 taaaacgtggtgtatttaca 53
>gb|AC009488.5| Homo sapiens BAC clone RP11-336D7 from 7, complete sequence Length = 98876 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 425 cggcctccttcgcctccaagaggt 448 |||||||||| ||||||||||||| Sbjct: 62502 cggcctccttggcctccaagaggt 62479
>gb|AC025763.5| Homo sapiens chromosome 16 clone CTB-186A5, complete sequence Length = 194690 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 gaaagtctaaaacgtggtgt 109 |||||||||||||||||||| Sbjct: 135493 gaaagtctaaaacgtggtgt 135474
>gb|U81317.1|MMU81317 Mus musculus myelin-associated/oligodendrocyte basic protein (Mobp) mRNA, complete cds Length = 410 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 472 gggttgacctgctcctcctc 491 |||||||||||||||||||| Sbjct: 291 gggttgacctgctcctcctc 272
>dbj|AK028057.1| Mus musculus adult male cerebellum cDNA, RIKEN full-length enriched library, clone:1500035N02 product:myelin-associated oligodendrocytic basic protein, full insert sequence Length = 3286 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 472 gggttgacctgctcctcctc 491 |||||||||||||||||||| Sbjct: 371 gggttgacctgctcctcctc 352
>dbj|AK083103.1| Mus musculus adult male hippocampus cDNA, RIKEN full-length enriched library, clone:C630014L05 product:myelin-associated oligodendrocytic basic protein, full insert sequence Length = 2610 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 472 gggttgacctgctcctcctc 491 |||||||||||||||||||| Sbjct: 372 gggttgacctgctcctcctc 353
>gb|BC093628.1| Homo sapiens erythropoietin, mRNA (cDNA clone MGC:120663 IMAGE:7939473), complete cds Length = 747 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 425 cggcctccttcgcctccaagaggt 448 |||||||||| ||||||||||||| Sbjct: 226 cggcctccttggcctccaagaggt 203
>gb|AC137643.3| Homo sapiens chromosome 16 clone RP11-95H3, complete sequence Length = 159836 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 gaaagtctaaaacgtggtgt 109 |||||||||||||||||||| Sbjct: 121920 gaaagtctaaaacgtggtgt 121939
>gb|AF202307.1|AF202306S2 Homo sapiens erythropoietin (EPO) gene, exons 2 and 3 Length = 520 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 425 cggcctccttcgcctccaagaggt 448 |||||||||| ||||||||||||| Sbjct: 153 cggcctccttggcctccaagaggt 130
>gb|AF202313.1|AF202312S2 Homo sapiens erythropoietin (EPO) gene, exons 2 and 3 Length = 504 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 425 cggcctccttcgcctccaagaggt 448 |||||||||| ||||||||||||| Sbjct: 149 cggcctccttggcctccaagaggt 126
>dbj|AP002743.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0710E05 Length = 179714 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 7 gttactgacaagtcacaggcaaag 30 ||||||||||||| |||||||||| Sbjct: 72222 gttactgacaagtgacaggcaaag 72245
>gb|AF120476.1|AF120475S2 Mus musculus myelin-associated oligodendrocytic basic proteins MOBP73 and MOBP81 (Mobp) gene, exons 6 through 7c and complete cds, alternatively spliced Length = 4865 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 472 gggttgacctgctcctcctc 491 |||||||||||||||||||| Sbjct: 2060 gggttgacctgctcctcctc 2041
>dbj|AK119868.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-179-B12, full insert sequence Length = 1834 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 7 gttactgacaagtcacaggcaaag 30 ||||||||||||| |||||||||| Sbjct: 1673 gttactgacaagtgacaggcaaag 1696
>gb|AF202310.1|AF202309S2 Homo sapiens erythropoietin (EPO) gene, exons 2 and 3 and partial cds Length = 508 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 425 cggcctccttcgcctccaagaggt 448 |||||||||| ||||||||||||| Sbjct: 153 cggcctccttggcctccaagaggt 130
>gb|BC111937.1| Homo sapiens erythropoietin, mRNA (cDNA clone MGC:138142 IMAGE:8327405), complete cds Length = 747 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 425 cggcctccttcgcctccaagaggt 448 |||||||||| ||||||||||||| Sbjct: 226 cggcctccttggcctccaagaggt 203
>gb|AC110091.4| Mus musculus BAC clone RP24-87K15 from 9, complete sequence Length = 222792 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 472 gggttgacctgctcctcctc 491 |||||||||||||||||||| Sbjct: 108360 gggttgacctgctcctcctc 108341
>emb|BX004780.4| Zebrafish DNA sequence from clone CH211-202P1 in linkage group 20, complete sequence Length = 188317 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 atgtttaactatcatgaact 89 |||||||||||||||||||| Sbjct: 44418 atgtttaactatcatgaact 44437
>gb|U25134.1|HSU25134 Human carbonic anhydrase V (CA-V) gene, nuclear gene encoding mitochondrial protein, complete cds Length = 3416 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 97 taaaacgtggtgtatttaca 116 |||||||||||||||||||| Sbjct: 2342 taaaacgtggtgtatttaca 2361
>emb|AL359235.3|CNS05TEM Human chromosome 14 DNA sequence BAC C-3078G23 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 150662 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 gaagttactgacaagtcaca 23 |||||||||||||||||||| Sbjct: 149692 gaagttactgacaagtcaca 149673
>emb|AL355094.3|CNS05TCD Human chromosome 14 DNA sequence BAC R-676P5 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 170273 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 gaagttactgacaagtcaca 23 |||||||||||||||||||| Sbjct: 138990 gaagttactgacaagtcaca 139009
>gb|AC133539.2| Homo sapiens chromosome 16 clone GS1-21A4, complete sequence Length = 108508 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 97 taaaacgtggtgtatttaca 116 |||||||||||||||||||| Sbjct: 51384 taaaacgtggtgtatttaca 51403
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 418 gccacgccggcctccttcgcctcc 441 ||||||||||||||| |||||||| Sbjct: 2610224 gccacgccggcctccatcgcctcc 2610247
>gb|AF440524.1| Pseudomonas aeruginosa strain SG17M genomic sequence, integrated gene island PAGI-3(SG) Length = 128136 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 408 aatgatgtacgccacgccgg 427 |||||||||||||||||||| Sbjct: 18329 aatgatgtacgccacgccgg 18310
>gb|M11319.1|HUMERPA Human erythropoietin gene, complete cds Length = 3602 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 425 cggcctccttcgcctccaagaggt 448 |||||||||| ||||||||||||| Sbjct: 1335 cggcctccttggcctccaagaggt 1312
>emb|X02158.1|HSERPG Human gene for erythropoietin Length = 3398 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 425 cggcctccttcgcctccaagaggt 448 |||||||||| ||||||||||||| Sbjct: 1328 cggcctccttggcctccaagaggt 1305
>emb|X02157.1|HSERPR Human mRNA for fetal erythropoietin Length = 1342 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 425 cggcctccttcgcctccaagaggt 448 |||||||||| ||||||||||||| Sbjct: 329 cggcctccttggcctccaagaggt 306
>gb|L10609.1|MACERYTHRO Macaca mulatta erythropoietin mRNA, complete cds Length = 691 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 425 cggcctccttcgcctccaagaggt 448 |||||||||| ||||||||||||| Sbjct: 148 cggcctccttggcctccaagaggt 125
>gb|M18189.1|MACEPO Monkey (Cynomolgus) erythropoietin mRNA, complete cds Length = 1462 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 425 cggcctccttcgcctccaagaggt 448 |||||||||| ||||||||||||| Sbjct: 364 cggcctccttggcctccaagaggt 341 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,121,301 Number of Sequences: 3902068 Number of extensions: 4121301 Number of successful extensions: 78019 Number of sequences better than 10.0: 93 Number of HSP's better than 10.0 without gapping: 96 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 77641 Number of HSP's gapped (non-prelim): 371 length of query: 623 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 600 effective length of database: 17,143,297,704 effective search space: 10285978622400 effective search space used: 10285978622400 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)