ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags11j05 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 222 bits (112), Expect = 9e-55 Identities = 124/128 (96%) Strand = Plus / Minus Query: 297 gctagttcttgaggaggtagtcgtcgaggtcgtggaaggtcttggcggcggtctccttga 356 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23253828 gctagttcttgaggaggtagtcgtcgaggtcgtggaaggtcttggcggcggtctccttga 23253769 Query: 357 tgacgtctggctcgggcacctcgtcgctggccttgtcgaagtccatggtccagttcacca 416 ||||||| || ||||||||||| |||||||||||||||||||||||||||||| |||||| Sbjct: 23253768 tgacgtccgggtcgggcacctcctcgctggccttgtcgaagtccatggtccagctcacca 23253709 Query: 417 ccgcgccg 424 |||||||| Sbjct: 23253708 ccgcgccg 23253701 Score = 157 bits (79), Expect = 5e-35 Identities = 91/95 (95%) Strand = Plus / Minus Query: 449 gtcacctgcaccgtcaccctgaagttcttgtagaagctaaccagctcgccgtccaccacg 508 |||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 23253667 gtcacctgcagcgtcaccctgaagttcttgtagaagctgaccagctcgccgtccaccacg 23253608 Query: 509 ctgtaggacaccaacttcttctcgtcgtccgccac 543 ||||| ||||||| ||||||||||||||||||||| Sbjct: 23253607 ctgtacgacaccaccttcttctcgtcgtccgccac 23253573
>dbj|AK119676.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-156-G11, full insert sequence Length = 757 Score = 222 bits (112), Expect = 9e-55 Identities = 124/128 (96%) Strand = Plus / Minus Query: 297 gctagttcttgaggaggtagtcgtcgaggtcgtggaaggtcttggcggcggtctccttga 356 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 560 gctagttcttgaggaggtagtcgtcgaggtcgtggaaggtcttggcggcggtctccttga 501 Query: 357 tgacgtctggctcgggcacctcgtcgctggccttgtcgaagtccatggtccagttcacca 416 ||||||| || ||||||||||| |||||||||||||||||||||||||||||| |||||| Sbjct: 500 tgacgtccgggtcgggcacctcctcgctggccttgtcgaagtccatggtccagctcacca 441 Query: 417 ccgcgccg 424 |||||||| Sbjct: 440 ccgcgccg 433 Score = 157 bits (79), Expect = 5e-35 Identities = 91/95 (95%) Strand = Plus / Minus Query: 449 gtcacctgcaccgtcaccctgaagttcttgtagaagctaaccagctcgccgtccaccacg 508 |||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 399 gtcacctgcagcgtcaccctgaagttcttgtagaagctgaccagctcgccgtccaccacg 340 Query: 509 ctgtaggacaccaacttcttctcgtcgtccgccac 543 ||||| ||||||| ||||||||||||||||||||| Sbjct: 339 ctgtacgacaccaccttcttctcgtcgtccgccac 305
>dbj|AK059231.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-E05, full insert sequence Length = 753 Score = 222 bits (112), Expect = 9e-55 Identities = 124/128 (96%) Strand = Plus / Minus Query: 297 gctagttcttgaggaggtagtcgtcgaggtcgtggaaggtcttggcggcggtctccttga 356 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 556 gctagttcttgaggaggtagtcgtcgaggtcgtggaaggtcttggcggcggtctccttga 497 Query: 357 tgacgtctggctcgggcacctcgtcgctggccttgtcgaagtccatggtccagttcacca 416 ||||||| || ||||||||||| |||||||||||||||||||||||||||||| |||||| Sbjct: 496 tgacgtccgggtcgggcacctcctcgctggccttgtcgaagtccatggtccagctcacca 437 Query: 417 ccgcgccg 424 |||||||| Sbjct: 436 ccgcgccg 429 Score = 157 bits (79), Expect = 5e-35 Identities = 91/95 (95%) Strand = Plus / Minus Query: 449 gtcacctgcaccgtcaccctgaagttcttgtagaagctaaccagctcgccgtccaccacg 508 |||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 395 gtcacctgcagcgtcaccctgaagttcttgtagaagctgaccagctcgccgtccaccacg 336 Query: 509 ctgtaggacaccaacttcttctcgtcgtccgccac 543 ||||| ||||||| ||||||||||||||||||||| Sbjct: 335 ctgtacgacaccaccttcttctcgtcgtccgccac 301
>emb|AL606653.3|OSJN00104 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0048E02, complete sequence Length = 121337 Score = 222 bits (112), Expect = 9e-55 Identities = 124/128 (96%) Strand = Plus / Minus Query: 297 gctagttcttgaggaggtagtcgtcgaggtcgtggaaggtcttggcggcggtctccttga 356 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 91981 gctagttcttgaggaggtagtcgtcgaggtcgtggaaggtcttggcggcggtctccttga 91922 Query: 357 tgacgtctggctcgggcacctcgtcgctggccttgtcgaagtccatggtccagttcacca 416 ||||||| || ||||||||||| |||||||||||||||||||||||||||||| |||||| Sbjct: 91921 tgacgtccgggtcgggcacctcctcgctggccttgtcgaagtccatggtccagctcacca 91862 Query: 417 ccgcgccg 424 |||||||| Sbjct: 91861 ccgcgccg 91854 Score = 157 bits (79), Expect = 5e-35 Identities = 91/95 (95%) Strand = Plus / Minus Query: 449 gtcacctgcaccgtcaccctgaagttcttgtagaagctaaccagctcgccgtccaccacg 508 |||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 91820 gtcacctgcagcgtcaccctgaagttcttgtagaagctgaccagctcgccgtccaccacg 91761 Query: 509 ctgtaggacaccaacttcttctcgtcgtccgccac 543 ||||| ||||||| ||||||||||||||||||||| Sbjct: 91760 ctgtacgacaccaccttcttctcgtcgtccgccac 91726
>ref|XM_472791.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 474 Score = 220 bits (111), Expect = 4e-54 Identities = 123/127 (96%) Strand = Plus / Minus Query: 298 ctagttcttgaggaggtagtcgtcgaggtcgtggaaggtcttggcggcggtctccttgat 357 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 474 ctagttcttgaggaggtagtcgtcgaggtcgtggaaggtcttggcggcggtctccttgat 415 Query: 358 gacgtctggctcgggcacctcgtcgctggccttgtcgaagtccatggtccagttcaccac 417 |||||| || ||||||||||| |||||||||||||||||||||||||||||| ||||||| Sbjct: 414 gacgtccgggtcgggcacctcctcgctggccttgtcgaagtccatggtccagctcaccac 355 Query: 418 cgcgccg 424 ||||||| Sbjct: 354 cgcgccg 348 Score = 157 bits (79), Expect = 5e-35 Identities = 91/95 (95%) Strand = Plus / Minus Query: 449 gtcacctgcaccgtcaccctgaagttcttgtagaagctaaccagctcgccgtccaccacg 508 |||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 314 gtcacctgcagcgtcaccctgaagttcttgtagaagctgaccagctcgccgtccaccacg 255 Query: 509 ctgtaggacaccaacttcttctcgtcgtccgccac 543 ||||| ||||||| ||||||||||||||||||||| Sbjct: 254 ctgtacgacaccaccttcttctcgtcgtccgccac 220
>gb|AY754698.1| Zea mays Bet v I allergen mRNA, complete cds Length = 532 Score = 151 bits (76), Expect = 3e-33 Identities = 103/112 (91%) Strand = Plus / Minus Query: 298 ctagttcttgaggaggtagtcgtcgaggtcgtggaaggtcttggcggcggtctccttgat 357 |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| | Sbjct: 529 ctagttcttgaggaggtagtcgtcgaggtcgtggaacgtcttggtggcggtctccttggt 470 Query: 358 gacgtctggctcgggcacctcgtcgctggccttgtcgaagtccatggtccag 409 |||||| || |||||||||| |||| ||||||||||||| ||||||| |||| Sbjct: 469 gacgtccgggtcgggcacctggtcgttggccttgtcgaactccatggcccag 418 Score = 91.7 bits (46), Expect = 2e-15 Identities = 67/74 (90%) Strand = Plus / Minus Query: 468 tgaagttcttgtagaagctaaccagctcgccgtccaccacgctgtaggacaccaacttct 527 ||||||||||||||||| ||||||||||||||||||||||||| ||||||| ||| | Sbjct: 359 tgaagttcttgtagaagtccgccagctcgccgtccaccacgctgtacgacaccaccttgt 300 Query: 528 tctcgtcgtccgcc 541 |||||||||||||| Sbjct: 299 tctcgtcgtccgcc 286
>gb|AY112466.1| Zea mays CL10221_1 mRNA sequence Length = 767 Score = 151 bits (76), Expect = 3e-33 Identities = 103/112 (91%) Strand = Plus / Plus Query: 298 ctagttcttgaggaggtagtcgtcgaggtcgtggaaggtcttggcggcggtctccttgat 357 |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| Sbjct: 297 ctagttcttgaggaggtagtcgtcgaggtcgtggaacgtcttggtggcggtctccttgat 356 Query: 358 gacgtctggctcgggcacctcgtcgctggccttgtcgaagtccatggtccag 409 |||||| || || ||||||| |||| ||||||||||||| ||||||| |||| Sbjct: 357 gacgtccgggtcaggcacctggtcgttggccttgtcgaactccatggcccag 408 Score = 91.7 bits (46), Expect = 2e-15 Identities = 67/74 (90%) Strand = Plus / Plus Query: 468 tgaagttcttgtagaagctaaccagctcgccgtccaccacgctgtaggacaccaacttct 527 ||||||||||||||||| ||||||||||||||||||||||||| ||||||| ||| | Sbjct: 467 tgaagttcttgtagaagtccgccagctcgccgtccaccacgctgtacgacaccaccttgt 526 Query: 528 tctcgtcgtccgcc 541 |||||||||||||| Sbjct: 527 tctcgtcgtccgcc 540
>emb|BX005260.12| Zebrafish DNA sequence from clone DKEY-209F7 in linkage group 16, complete sequence Length = 197061 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 239 atggacggacggacggatggagg 261 ||||||||||||||||||||||| Sbjct: 193827 atggacggacggacggatggagg 193849
>emb|CR786562.6| Zebrafish DNA sequence from clone CH211-244H7 in linkage group 18, complete sequence Length = 144824 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Plus Query: 242 gacggacggacggatggaggatc 264 ||||||||||||||||||||||| Sbjct: 54930 gacggacggacggatggaggatc 54952
>emb|BX927076.9| Zebrafish DNA sequence from clone CH211-241L24 in linkage group 18, complete sequence Length = 152951 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 242 gacggacggacggatggaggatc 264 ||||||||||||||||||||||| Sbjct: 89376 gacggacggacggatggaggatc 89354
>gb|AY643066.1| Tigriopus californicus clone TCS197 microsatellite sequence Length = 442 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 238 catggacggacggacggatgga 259 |||||||||||||||||||||| Sbjct: 71 catggacggacggacggatgga 50
>gb|AC109460.3| Homo sapiens chromosome 16 clone RP11-264B17, complete sequence Length = 163424 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 239 atggacggacggacggatggag 260 |||||||||||||||||||||| Sbjct: 106852 atggacggacggacggatggag 106831
>gb|AY254832.1| Gorilla gorilla cytochrome c oxidase subunit VIII heart form (COX8H) pseudogene, upstream non-coding region and exon 2 Length = 3532 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 238 catggacggacggacggatgga 259 |||||||||||||||||||||| Sbjct: 747 catggacggacggacggatgga 726
>gb|AC112166.3| Homo sapiens chromosome 16 clone CTB-134H23, complete sequence Length = 131839 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 239 atggacggacggacggatggag 260 |||||||||||||||||||||| Sbjct: 126423 atggacggacggacggatggag 126444
>emb|BX649570.7| Zebrafish DNA sequence from clone CH211-13L22 in linkage group 21, complete sequence Length = 157398 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 239 atggacggacggacggatggag 260 |||||||||||||||||||||| Sbjct: 49589 atggacggacggacggatggag 49568
>dbj|AP006566.1| Homo sapiens genomic DNA, chromosome 11 clone:CMF9-427I16, complete sequence Length = 24220 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Plus Query: 238 catggacggacggacggatgga 259 |||||||||||||||||||||| Sbjct: 19995 catggacggacggacggatgga 20016
>gb|AC120416.11| Mus musculus chromosome 1, clone RP24-472N18, complete sequence Length = 199727 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 239 atggacggacggacggatgga 259 ||||||||||||||||||||| Sbjct: 43188 atggacggacggacggatgga 43208
>gb|DQ223122.1| Alasmidonta heterodon microsatellite AheC5 sequence Length = 549 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 239 atggacggacggacggatgga 259 ||||||||||||||||||||| Sbjct: 251 atggacggacggacggatgga 231
>gb|AC114434.4| Rattus norvegicus 1 BAC CH230-210C18 (Children's Hospital Oakland Research Institute) complete sequence Length = 127883 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 239 atggacggacggacggatgga 259 ||||||||||||||||||||| Sbjct: 68204 atggacggacggacggatgga 68184
>gb|DQ481669.1| Takifugu rubripes HoxDb gene cluster, complete sequence Length = 398525 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 239 atggacggacggacggatgga 259 ||||||||||||||||||||| Sbjct: 363753 atggacggacggacggatgga 363773
>emb|CR450690.7| Zebrafish DNA sequence from clone CH211-78C14 in linkage group 11, complete sequence Length = 163328 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 239 atggacggacggacggatgga 259 ||||||||||||||||||||| Sbjct: 67878 atggacggacggacggatgga 67898
>emb|CR589948.8| Zebrafish DNA sequence from clone CH211-160P12 in linkage group 15, complete sequence Length = 162791 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 239 atggacggacggacggatgga 259 ||||||||||||||||||||| Sbjct: 82313 atggacggacggacggatgga 82333
>gb|AC124684.3| Mus musculus BAC clone RP24-375D13 from chromosome 1, complete sequence Length = 167927 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 239 atggacggacggacggatgga 259 ||||||||||||||||||||| Sbjct: 26964 atggacggacggacggatgga 26944
>gb|AC124381.4| Mus musculus BAC clone RP24-406E24 from chromosome 15, complete sequence Length = 176561 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 239 atggacggacggacggatgga 259 ||||||||||||||||||||| Sbjct: 53239 atggacggacggacggatgga 53259
>emb|CR762488.16| Zebrafish DNA sequence from clone DKEY-266J7 in linkage group 18, complete sequence Length = 154489 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 239 atggacggacggacggatgga 259 ||||||||||||||||||||| Sbjct: 41393 atggacggacggacggatgga 41373
>emb|CR545462.25| Zebrafish DNA sequence from clone DKEYP-88F5 in linkage group 20, complete sequence Length = 199482 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 239 atggacggacggacggatgga 259 ||||||||||||||||||||| Sbjct: 198145 atggacggacggacggatgga 198165
>gb|AC125409.3| Mus musculus BAC clone RP23-127O4 from 12, complete sequence Length = 209670 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 239 atggacggacggacggatgga 259 ||||||||||||||||||||| Sbjct: 99446 atggacggacggacggatgga 99426
>emb|CR931814.13| Zebrafish DNA sequence from clone DKEY-236E8 in linkage group 5, complete sequence Length = 155089 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 239 atggacggacggacggatgga 259 ||||||||||||||||||||| Sbjct: 111989 atggacggacggacggatgga 111969
>emb|BX927158.14| Zebrafish DNA sequence from clone DKEY-106K1 in linkage group 5, complete sequence Length = 144909 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 239 atggacggacggacggatgga 259 ||||||||||||||||||||| Sbjct: 143168 atggacggacggacggatgga 143148
>emb|BX510331.13| Zebrafish DNA sequence from clone CH211-42B22 in linkage group 17, complete sequence Length = 150762 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 239 atggacggacggacggatgga 259 ||||||||||||||||||||| Sbjct: 48415 atggacggacggacggatgga 48395
>gb|AC162871.2| Mus musculus chromosome 1, clone RP24-330F8, complete sequence Length = 126140 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 239 atggacggacggacggatgga 259 ||||||||||||||||||||| Sbjct: 5758 atggacggacggacggatgga 5778
>emb|BX276112.19| Zebrafish DNA sequence from clone CH211-220I12 in linkage group 24, complete sequence Length = 146065 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 239 atggacggacggacggatgga 259 ||||||||||||||||||||| Sbjct: 20184 atggacggacggacggatgga 20204
>gb|AC087363.17| Homo sapiens chromosome 8, clone RP11-529P14, complete sequence Length = 174028 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 239 atggacggacggacggatgga 259 ||||||||||||||||||||| Sbjct: 116885 atggacggacggacggatgga 116865
>emb|AL590080.25| Human DNA sequence from clone RP11-469M1 on chromosome 10 Contains the HHEX gene for hematopoietically expressed homeobox, the 5' end of the gene for SEC15 (S. cerevisiae)-like (SEC15L), a eukaryotic translation initiation factor 2 subunit 2 (eIF-2-beta) pseudogene and four CpG islands, complete sequence Length = 190144 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 239 atggacggacggacggatgga 259 ||||||||||||||||||||| Sbjct: 162103 atggacggacggacggatgga 162083
>emb|AL589949.15| Human DNA sequence from clone RP11-169F1 on chromosome 10 Contains a CpG island, complete sequence Length = 153802 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 239 atggacggacggacggatgga 259 ||||||||||||||||||||| Sbjct: 72435 atggacggacggacggatgga 72455
>emb|AL450026.10| Human DNA sequence from clone RP11-439A18 on chromosome 9 Contains the 5' UTR of a variant of a novel gene (MGC20553) and a CpG island, complete sequence Length = 84632 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 239 atggacggacggacggatgga 259 ||||||||||||||||||||| Sbjct: 37025 atggacggacggacggatgga 37045
>emb|AL391316.7| Human DNA sequence from clone XX-YM901F10 on chromosome 20 Contains ESTs, GSSs and STSs, complete sequence Length = 49377 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 239 atggacggacggacggatgga 259 ||||||||||||||||||||| Sbjct: 7685 atggacggacggacggatgga 7705
>emb|AL356072.21| Human DNA sequence from clone RP11-141M15 on chromosome 1 Contains the DNB5 gene for deleted in neuroblastoma 5 and the 3' end of the RERE gene for arginine-glutamic acid dipeptide (RE) repeats (KIAA0458), complete sequence Length = 122331 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 239 atggacggacggacggatgga 259 ||||||||||||||||||||| Sbjct: 65505 atggacggacggacggatgga 65485
>emb|AL158822.19| Human DNA sequence from clone RP11-100C15 on chromosome 9q34.2-34.3 Contains the 3' end of a novel gene containing DKFZp434G2311, the KCNT1 gene for member 1 of the potassium channel subfamily T, the 3' end of a novel gene, part of the gene for a novel protein similar to mouse RIKEN 9230102I19 (9230102I19RIK) and nine CpG islands, complete sequence Length = 187336 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 239 atggacggacggacggatgga 259 ||||||||||||||||||||| Sbjct: 83004 atggacggacggacggatgga 82984
>emb|AL035703.21|HS61A9 Human DNA sequence from clone RP1-61A9 on chromosome 1p35.2-36.13 Contains a novel gene (KIAA0478) and the EPHA8 gene for ephrin receptor EphA8 precursor, complete sequence Length = 160705 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 239 atggacggacggacggatgga 259 ||||||||||||||||||||| Sbjct: 126565 atggacggacggacggatgga 126545
>emb|AL031847.17|HS120G22 Human DNA sequence from clone RP1-120G22 on chromosome 1p36.21-36.33 Contains the 5' end of the CHD5 gene for chromodomain helicase DNA binding protein 5, the RPL22 gene for ribosomal protein L22, eight novel genes, the ICMT gene for isoprenylcysteine carboxyl methyltransferase, possible ortholog of rodent transcription factor HES-3, the 3' end of the gene for brain acyl-CoA hydrolase (BACH) and seven CpG islands, complete sequence Length = 166518 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 239 atggacggacggacggatgga 259 ||||||||||||||||||||| Sbjct: 134157 atggacggacggacggatgga 134137
>emb|AL022319.2|HS172B20 Human DNA sequence from clone RP1-172B20 on chromosome 22q12.3-13.1 Contains the 3' part of the CACNA1I gene for voltage-dependent calcium channel, alpha 1I subunit, ESTs, STSs, GSSs and a putative CpG island, complete sequence Length = 213721 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 239 atggacggacggacggatgga 259 ||||||||||||||||||||| Sbjct: 523 atggacggacggacggatgga 503
>emb|BX470211.10| Zebrafish DNA sequence from clone DKEY-165A24 in linkage group 7, complete sequence Length = 173552 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 239 atggacggacggacggatgga 259 ||||||||||||||||||||| Sbjct: 124094 atggacggacggacggatgga 124074
>gb|AC144770.1| Homo sapiens chromosome 19 clone XXfos-87852H4, complete sequence Length = 45852 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 239 atggacggacggacggatgga 259 ||||||||||||||||||||| Sbjct: 5922 atggacggacggacggatgga 5942
>emb|CR407599.9| Zebrafish DNA sequence from clone CH211-273O22 in linkage group 13, complete sequence Length = 32537 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 239 atggacggacggacggatgga 259 ||||||||||||||||||||| Sbjct: 18820 atggacggacggacggatgga 18840
>emb|BX649198.6| Zebrafish DNA sequence from clone DKEY-18L1 in linkage group 9, complete sequence Length = 139896 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 239 atggacggacggacggatgga 259 ||||||||||||||||||||| Sbjct: 111244 atggacggacggacggatgga 111264
>emb|BX957230.5| Zebrafish DNA sequence from clone DKEY-106I11 in linkage group 6, complete sequence Length = 68670 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 239 atggacggacggacggatgga 259 ||||||||||||||||||||| Sbjct: 17596 atggacggacggacggatgga 17616
>emb|BX927256.13| Zebrafish DNA sequence from clone CH211-272F14 in linkage group 5, complete sequence Length = 130184 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 239 atggacggacggacggatgga 259 ||||||||||||||||||||| Sbjct: 78616 atggacggacggacggatgga 78596
>emb|CR384103.7| Zebrafish DNA sequence from clone DKEY-215K6 in linkage group 5, complete sequence Length = 142808 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 239 atggacggacggacggatgga 259 ||||||||||||||||||||| Sbjct: 87816 atggacggacggacggatgga 87836
>emb|CR361569.11| Zebrafish DNA sequence from clone CH211-99I20 in linkage group 8, complete sequence Length = 97203 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 239 atggacggacggacggatgga 259 ||||||||||||||||||||| Sbjct: 30871 atggacggacggacggatgga 30891
>emb|CR847800.4| Zebrafish DNA sequence from clone DKEY-182M5 in linkage group 14, complete sequence Length = 187193 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 239 atggacggacggacggatgga 259 ||||||||||||||||||||| Sbjct: 83651 atggacggacggacggatgga 83671
>emb|CR293518.13| Zebrafish DNA sequence from clone CH211-129L10 in linkage group 12, complete sequence Length = 196374 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 239 atggacggacggacggatgga 259 ||||||||||||||||||||| Sbjct: 175981 atggacggacggacggatgga 176001
>gb|AC078960.26| Homo sapiens Xp BAC RP11-692P14 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 81427 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 239 atggacggacggacggatgga 259 ||||||||||||||||||||| Sbjct: 58684 atggacggacggacggatgga 58704
>emb|AJ720631.1| Gallus gallus mRNA for hypothetical protein, clone 22c19 Length = 2338 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 241 ggacggacggacggatggagg 261 ||||||||||||||||||||| Sbjct: 155 ggacggacggacggatggagg 135
>emb|CR759889.5| Zebrafish DNA sequence from clone DKEY-172F14 in linkage group 5, complete sequence Length = 129171 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 239 atggacggacggacggatgga 259 ||||||||||||||||||||| Sbjct: 259 atggacggacggacggatgga 239
>emb|BX663615.15| Zebrafish DNA sequence from clone DKEY-14B2 in linkage group 7, complete sequence Length = 212543 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 239 atggacggacggacggatgga 259 ||||||||||||||||||||| Sbjct: 47203 atggacggacggacggatgga 47183
>gb|AC092566.2| Homo sapiens chromosome 19 clone LLNLR-239F4, complete sequence Length = 38046 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 239 atggacggacggacggatgga 259 ||||||||||||||||||||| Sbjct: 28439 atggacggacggacggatgga 28419
>gb|AC010069.9| Drosophila melanogaster 3L BAC RP98-17C18 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 166352 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 239 atggacggacggacggatgga 259 ||||||||||||||||||||| Sbjct: 63793 atggacggacggacggatgga 63773
>emb|BX510645.7| Zebrafish DNA sequence from clone DKEY-5G21 in linkage group 14, complete sequence Length = 218603 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 239 atggacggacggacggatgga 259 ||||||||||||||||||||| Sbjct: 210424 atggacggacggacggatgga 210404 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 239 atggacggacggacggatgga 259 ||||||||||||||||||||| Sbjct: 210404 atggacggacggacggatgga 210384
>gb|AC114147.5| Rattus norvegicus BAC CH230-144F3 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 214988 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 239 atggacggacggacggatgga 259 ||||||||||||||||||||| Sbjct: 175075 atggacggacggacggatgga 175055
>gb|AC021755.9| Homo sapiens chromosome 15 clone RP11-521C20 map 15q15, complete sequence Length = 161794 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 239 atggacggacggacggatgga 259 ||||||||||||||||||||| Sbjct: 10906 atggacggacggacggatgga 10886
>gb|AC092723.3| Homo sapiens chromosome 16 clone RP11-542M13, complete sequence Length = 188458 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 239 atggacggacggacggatgga 259 ||||||||||||||||||||| Sbjct: 104329 atggacggacggacggatgga 104349
>emb|CR524364.1| Gallus gallus finished cDNA, clone ChEST812j8 Length = 791 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 239 atggacggacggacggatgga 259 ||||||||||||||||||||| Sbjct: 218 atggacggacggacggatgga 198
>emb|BX294178.13| Zebrafish DNA sequence from clone CH211-271C18 in linkage group 7, complete sequence Length = 131441 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 239 atggacggacggacggatgga 259 ||||||||||||||||||||| Sbjct: 40354 atggacggacggacggatgga 40334
>emb|BX323090.7| Zebrafish DNA sequence from clone CH211-274B7 in linkage group 1, complete sequence Length = 166353 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 239 atggacggacggacggatgga 259 ||||||||||||||||||||| Sbjct: 33256 atggacggacggacggatgga 33276
>emb|BX649487.7| Zebrafish DNA sequence from clone DKEY-148C4 in linkage group 9, complete sequence Length = 201933 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 239 atggacggacggacggatgga 259 ||||||||||||||||||||| Sbjct: 173911 atggacggacggacggatgga 173931
>gb|AC025168.7|AC025168 Homo sapiens chromosome 15 clone RP11-43D14 map 15q14, complete sequence Length = 173336 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 239 atggacggacggacggatgga 259 ||||||||||||||||||||| Sbjct: 126240 atggacggacggacggatgga 126220
>emb|BX649377.8| Zebrafish DNA sequence from clone CH211-196J1 in linkage group 19, complete sequence Length = 217898 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 239 atggacggacggacggatgga 259 ||||||||||||||||||||| Sbjct: 75436 atggacggacggacggatgga 75416
>gb|AC146538.2| Gasterosteus aculeatus clone CH213-118G22, complete sequence Length = 211945 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 239 atggacggacggacggatgga 259 ||||||||||||||||||||| Sbjct: 129692 atggacggacggacggatgga 129712 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 239 atggacggacggacggatgga 259 ||||||||||||||||||||| Sbjct: 129560 atggacggacggacggatgga 129580
>emb|BX322541.12| Zebrafish DNA sequence from clone DKEY-78P10 in linkage group 5, complete sequence Length = 227940 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 239 atggacggacggacggatgga 259 ||||||||||||||||||||| Sbjct: 217922 atggacggacggacggatgga 217942
>emb|BX005074.10| Zebrafish DNA sequence from clone CH211-146J7 in linkage group 8, complete sequence Length = 153989 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 239 atggacggacggacggatgga 259 ||||||||||||||||||||| Sbjct: 116681 atggacggacggacggatgga 116701
>gb|AC006112.4| Homo sapiens chromosome 16 clone RP11-472H7, complete sequence Length = 191158 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 239 atggacggacggacggatgga 259 ||||||||||||||||||||| Sbjct: 189546 atggacggacggacggatgga 189526
>gb|AC007223.5| Homo sapiens chromosome 16 clone RP11-468I15, complete sequence Length = 159520 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 239 atggacggacggacggatgga 259 ||||||||||||||||||||| Sbjct: 51434 atggacggacggacggatgga 51414
>gb|AC073592.11| Homo sapiens 12 BAC RP11-83B20 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 161127 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 239 atggacggacggacggatgga 259 ||||||||||||||||||||| Sbjct: 6366 atggacggacggacggatgga 6386
>gb|AF097022.1|AF097022 Leishmania infantum ribosomal L17 protein mRNA, complete cds Length = 583 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 407 cagttcaccaccgcgccgacg 427 ||||||||||||||||||||| Sbjct: 80 cagttcaccaccgcgccgacg 60
>gb|AC092275.3| Homo sapiens chromosome 16 clone CTC-786C10, complete sequence Length = 191996 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 239 atggacggacggacggatgga 259 ||||||||||||||||||||| Sbjct: 102921 atggacggacggacggatgga 102901
>gb|AC007790.1|AC007790 Homo sapiens clone RP11-283D18 from 7q31, complete sequence Length = 207791 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 239 atggacggacggacggatgga 259 ||||||||||||||||||||| Sbjct: 69304 atggacggacggacggatgga 69284
>emb|BX294118.4| Zebrafish DNA sequence from clone DKEYP-38B6, complete sequence Length = 184616 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 239 atggacggacggacggatgga 259 ||||||||||||||||||||| Sbjct: 109214 atggacggacggacggatgga 109234
>emb|BX004814.8| Zebrafish DNA sequence from clone CH211-103I6 in linkage group 1, complete sequence Length = 171710 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 239 atggacggacggacggatgga 259 ||||||||||||||||||||| Sbjct: 23329 atggacggacggacggatgga 23309
>emb|BX005447.8| Zebrafish DNA sequence from clone DKEY-29B14, complete sequence Length = 283185 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 239 atggacggacggacggatgga 259 ||||||||||||||||||||| Sbjct: 128226 atggacggacggacggatgga 128246
>emb|BX005048.9| Zebrafish DNA sequence from clone CH211-167M1, complete sequence Length = 163525 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 239 atggacggacggacggatgga 259 ||||||||||||||||||||| Sbjct: 56563 atggacggacggacggatgga 56543
>emb|BX001023.12| Zebrafish DNA sequence from clone CH211-233F10 in linkage group 5, complete sequence Length = 168064 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 239 atggacggacggacggatgga 259 ||||||||||||||||||||| Sbjct: 20458 atggacggacggacggatgga 20478
>emb|BX530080.5| Zebrafish DNA sequence from clone CH211-191O15 in linkage group 14, complete sequence Length = 165220 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 239 atggacggacggacggatgga 259 ||||||||||||||||||||| Sbjct: 24381 atggacggacggacggatgga 24401
>emb|AL935283.16| Zebrafish DNA sequence from clone CH211-247O1 in linkage group 7, complete sequence Length = 197927 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 239 atggacggacggacggatgga 259 ||||||||||||||||||||| Sbjct: 104516 atggacggacggacggatgga 104536
>emb|AL805947.8| Zebrafish DNA sequence from clone CH211-212P13, complete sequence Length = 226542 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 239 atggacggacggacggatgga 259 ||||||||||||||||||||| Sbjct: 97134 atggacggacggacggatgga 97114
>emb|BX248418.16| Zebrafish DNA sequence from clone DKEY-181I3 in linkage group 20, complete sequence Length = 152757 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 239 atggacggacggacggatgga 259 ||||||||||||||||||||| Sbjct: 110921 atggacggacggacggatgga 110901
>emb|CR759865.13| Zebrafish DNA sequence from clone CH211-118E11 in linkage group 18, complete sequence Length = 95664 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 239 atggacggacggacggatgga 259 ||||||||||||||||||||| Sbjct: 88167 atggacggacggacggatgga 88147
>emb|BX855612.9| Zebrafish DNA sequence from clone CH211-198C22 in linkage group 19, complete sequence Length = 212866 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 239 atggacggacggacggatgga 259 ||||||||||||||||||||| Sbjct: 164781 atggacggacggacggatgga 164801
>emb|CR628326.8| Zebrafish DNA sequence from clone CH211-247N12 in linkage group 19, complete sequence Length = 146234 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 239 atggacggacggacggatgga 259 ||||||||||||||||||||| Sbjct: 27933 atggacggacggacggatgga 27953
>emb|CR383683.17| Zebrafish DNA sequence from clone DKEY-114C3 in linkage group 22, complete sequence Length = 153095 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 239 atggacggacggacggatgga 259 ||||||||||||||||||||| Sbjct: 65470 atggacggacggacggatgga 65450 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 239 atggacggacggacggatgga 259 ||||||||||||||||||||| Sbjct: 65380 atggacggacggacggatgga 65360
>emb|BX950204.17| Zebrafish DNA sequence from clone DKEY-252P7 in linkage group 18, complete sequence Length = 133263 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 239 atggacggacggacggatgga 259 ||||||||||||||||||||| Sbjct: 50248 atggacggacggacggatgga 50268
>emb|BX569790.15| Zebrafish DNA sequence from clone DKEY-66D18 in linkage group 4, complete sequence Length = 61279 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 239 atggacggacggacggatgga 259 ||||||||||||||||||||| Sbjct: 22237 atggacggacggacggatgga 22257
>emb|BX571837.10| Zebrafish DNA sequence from clone CH211-261O1 in linkage group 19, complete sequence Length = 190521 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 239 atggacggacggacggatgga 259 ||||||||||||||||||||| Sbjct: 164324 atggacggacggacggatgga 164304
>emb|BX897713.10| Zebrafish DNA sequence from clone DKEY-217M24 in linkage group 4, complete sequence Length = 52569 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 239 atggacggacggacggatgga 259 ||||||||||||||||||||| Sbjct: 43966 atggacggacggacggatgga 43946
>emb|BX649398.4| Zebrafish DNA sequence from clone DKEY-202B22 in linkage group 4, complete sequence Length = 166156 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 239 atggacggacggacggatgga 259 ||||||||||||||||||||| Sbjct: 10767 atggacggacggacggatgga 10787
>emb|BX247873.15| Zebrafish DNA sequence from clone CH211-198O12 in linkage group 8, complete sequence Length = 139803 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 239 atggacggacggacggatgga 259 ||||||||||||||||||||| Sbjct: 111472 atggacggacggacggatgga 111452
>emb|BX005202.14| Zebrafish DNA sequence from clone DKEY-224N5 in linkage group 13, complete sequence Length = 220733 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 239 atggacggacggacggatgga 259 ||||||||||||||||||||| Sbjct: 51234 atggacggacggacggatgga 51214
>emb|BX088533.9| Zebrafish DNA sequence from clone DKEY-24B15 in linkage group 1, complete sequence Length = 265699 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 239 atggacggacggacggatgga 259 ||||||||||||||||||||| Sbjct: 208345 atggacggacggacggatgga 208325
>emb|BX901971.15| Zebrafish DNA sequence from clone DKEY-256M21 in linkage group 21, complete sequence Length = 156578 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 239 atggacggacggacggatgga 259 ||||||||||||||||||||| Sbjct: 67623 atggacggacggacggatgga 67603
>emb|CR759742.10| Zebrafish DNA sequence from clone CH211-149K24 in linkage group 7, complete sequence Length = 130794 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 239 atggacggacggacggatgga 259 ||||||||||||||||||||| Sbjct: 40235 atggacggacggacggatgga 40255
>gb|AE003524.5| Drosophila melanogaster chromosome 3L, section 61 of 83 of the complete sequence Length = 425677 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 239 atggacggacggacggatgga 259 ||||||||||||||||||||| Sbjct: 62638 atggacggacggacggatgga 62658
>emb|AL137786.3|CNS01DWO Human chromosome 14 DNA sequence BAC R-433J8 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 197689 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 239 atggacggacggacggatgga 259 ||||||||||||||||||||| Sbjct: 87178 atggacggacggacggatgga 87198
>emb|Z98266.1|HSZ98266 Homo sapiens gene encoding plakophilin (exons 1-13) Length = 49999 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 239 atggacggacggacggatgga 259 ||||||||||||||||||||| Sbjct: 37301 atggacggacggacggatgga 37321
>gb|AC113456.9| Mus musculus chromosome 1, clone RP23-257E16, complete sequence Length = 174902 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 239 atggacggacggacggatgga 259 ||||||||||||||||||||| Sbjct: 80547 atggacggacggacggatgga 80527
>dbj|AP001271.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-826F13, complete sequence Length = 210402 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 239 atggacggacggacggatgga 259 ||||||||||||||||||||| Sbjct: 79722 atggacggacggacggatgga 79702
>emb|AL929379.14| Zebrafish DNA sequence from clone CH211-156H6, complete sequence Length = 167232 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 239 atggacggacggacggatgga 259 ||||||||||||||||||||| Sbjct: 159839 atggacggacggacggatgga 159819
>emb|AL954361.7| Zebrafish DNA sequence from clone CH211-280H11, complete sequence Length = 161681 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 239 atggacggacggacggatgga 259 ||||||||||||||||||||| Sbjct: 141431 atggacggacggacggatgga 141451
>emb|CR933780.12| Zebrafish DNA sequence from clone DKEY-60F6 in linkage group 5, complete sequence Length = 227454 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 239 atggacggacggacggatgga 259 ||||||||||||||||||||| Sbjct: 162331 atggacggacggacggatgga 162351
>gb|AC147236.3| Mus musculus BAC clone RP23-357C20 from 1, complete sequence Length = 217902 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 239 atggacggacggacggatgga 259 ||||||||||||||||||||| Sbjct: 71959 atggacggacggacggatgga 71979
>emb|CR450823.9| Zebrafish DNA sequence from clone CH211-241M2 in linkage group 11, complete sequence Length = 73433 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 239 atggacggacggacggatgga 259 ||||||||||||||||||||| Sbjct: 22959 atggacggacggacggatgga 22979
>emb|CR847498.12| Zebrafish DNA sequence from clone DKEY-263P22 in linkage group 14, complete sequence Length = 168227 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 239 atggacggacggacggatgga 259 ||||||||||||||||||||| Sbjct: 129081 atggacggacggacggatgga 129061
>gb|AC162526.3| Mus musculus BAC clone RP23-50I19 from chromosome 13, complete sequence Length = 219418 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 241 ggacggacggacggatggagg 261 ||||||||||||||||||||| Sbjct: 62006 ggacggacggacggatggagg 62026
>emb|AL606967.14| Mouse DNA sequence from clone RP23-304D5 on chromosome 4, complete sequence Length = 188425 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 239 atggacggacggacggatgga 259 ||||||||||||||||||||| Sbjct: 134300 atggacggacggacggatgga 134320
>emb|AL137918.4|CNS01DWQ Human chromosome 14 DNA sequence BAC R-442G21 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 162016 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 239 atggacggacggacggatgga 259 ||||||||||||||||||||| Sbjct: 50385 atggacggacggacggatgga 50405
>emb|AL592303.15| Mouse DNA sequence from clone RP23-238L2 on chromosome 1, complete sequence Length = 146855 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 239 atggacggacggacggatgga 259 ||||||||||||||||||||| Sbjct: 2437 atggacggacggacggatgga 2457
>gb|BC059907.1| Mus musculus RIKEN cDNA 2610528K11 gene, mRNA (cDNA clone MGC:69887 IMAGE:6824889), complete cds Length = 5014 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 239 atggacggacggacggatgg 258 |||||||||||||||||||| Sbjct: 3506 atggacggacggacggatgg 3525
>gb|BC049129.1| Mus musculus RIKEN cDNA 2610528K11 gene, mRNA (cDNA clone MGC:61197 IMAGE:6825067), complete cds Length = 4532 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 239 atggacggacggacggatgg 258 |||||||||||||||||||| Sbjct: 3019 atggacggacggacggatgg 3038
>gb|AY016023.1| Sphoeroides nephelus alpha globin gene cluster, complete sequence Length = 167215 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 240 tggacggacggacggatgga 259 |||||||||||||||||||| Sbjct: 68141 tggacggacggacggatgga 68160
>gb|AY146588.1| Triticum monococcum BAC clone 453N11, complete sequence Length = 285444 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 236 gccatggacggacggacgga 255 |||||||||||||||||||| Sbjct: 273591 gccatggacggacggacgga 273572
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 411 tcaccaccgcgccgacgccg 430 |||||||||||||||||||| Sbjct: 1126440 tcaccaccgcgccgacgccg 1126421
>gb|AC122350.4| Mus musculus BAC clone RP23-383P18 from chromosome 17, complete sequence Length = 198521 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 239 atggacggacggacggatgg 258 |||||||||||||||||||| Sbjct: 122184 atggacggacggacggatgg 122203
>ref|NM_011424.1| Mus musculus nuclear receptor co-repressor 2 (Ncor2), mRNA Length = 8544 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 tggacggacggacggatgga 259 |||||||||||||||||||| Sbjct: 7683 tggacggacggacggatgga 7664
>ref|NM_175184.3| Mus musculus RIKEN cDNA 2610528K11 gene (2610528K11Rik), mRNA Length = 5014 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 239 atggacggacggacggatgg 258 |||||||||||||||||||| Sbjct: 3506 atggacggacggacggatgg 3525
>gb|AC139377.4| Mus musculus chromosome 5 clone RP24-291G12, complete sequence Length = 191100 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 240 tggacggacggacggatgga 259 |||||||||||||||||||| Sbjct: 112345 tggacggacggacggatgga 112364
>gb|AC165415.5| Mus musculus chromosome 15, clone RP23-17G19, complete sequence Length = 227254 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 384 tggccttgtcgaagtccatggtcc 407 |||||||||| ||||||||||||| Sbjct: 157608 tggccttgtctaagtccatggtcc 157631
>gb|AC093799.2| Homo sapiens BAC clone RP11-307C18 from 7, complete sequence Length = 156195 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 47 caaaccaacccacaaatctaacac 70 ||||||||||||| |||||||||| Sbjct: 64598 caaaccaacccactaatctaacac 64621
>emb|CR788230.7| Zebrafish DNA sequence from clone DKEY-57I11 in linkage group 2, complete sequence Length = 223248 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 239 atggacggacggacggatgg 258 |||||||||||||||||||| Sbjct: 12357 atggacggacggacggatgg 12338
>emb|CR450831.4| Zebrafish DNA sequence from clone CH211-79O8 in linkage group 11, complete sequence Length = 190163 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 239 atggacggacggacggatgg 258 |||||||||||||||||||| Sbjct: 156221 atggacggacggacggatgg 156202
>gb|AC146389.3| Pan troglodytes BAC clone RP43-143J12 from 7, complete sequence Length = 141930 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 239 atggacggacggacggatgg 258 |||||||||||||||||||| Sbjct: 106711 atggacggacggacggatgg 106692
>emb|CR790381.6| Zebrafish DNA sequence from clone DKEY-202K24 in linkage group 3, complete sequence Length = 93389 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 tggacggacggacggatgga 259 |||||||||||||||||||| Sbjct: 12210 tggacggacggacggatgga 12191
>gb|AC127358.3| Mus musculus BAC clone RP23-109B9 from chromosome 18, complete sequence Length = 162003 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 239 atggacggacggacggatgg 258 |||||||||||||||||||| Sbjct: 61049 atggacggacggacggatgg 61068
>gb|BC047524.1| Mus musculus nuclear receptor co-repressor 2, mRNA (cDNA clone IMAGE:4526899), partial cds Length = 2964 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 tggacggacggacggatgga 259 |||||||||||||||||||| Sbjct: 2033 tggacggacggacggatgga 2014
>emb|BX293991.12| Zebrafish DNA sequence from clone CH211-261I24 in linkage group 11, complete sequence Length = 198825 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 240 tggacggacggacggatgga 259 |||||||||||||||||||| Sbjct: 5478 tggacggacggacggatgga 5497
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 411 tcaccaccgcgccgacgccg 430 |||||||||||||||||||| Sbjct: 771583 tcaccaccgcgccgacgccg 771564
>emb|AL161900.8| Human DNA sequence from clone RP11-479J22 on chromosome 13, complete sequence Length = 31248 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 tggacggacggacggatgga 259 |||||||||||||||||||| Sbjct: 19622 tggacggacggacggatgga 19603
>gb|AC124785.7| Rattus norvegicus 4 BAC CH230-141I8 (Children's Hospital Oakland Research Institute) complete sequence Length = 61619 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 tggacggacggacggatgga 259 |||||||||||||||||||| Sbjct: 39010 tggacggacggacggatgga 38991
>emb|BX640442.1| Bordetella bronchiseptica strain RB50, complete genome; segment 6/16 Length = 349876 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 412 caccaccgcgccgacgccgtcggc 435 ||||||||||||| |||||||||| Sbjct: 336511 caccaccgcgccgccgccgtcggc 336488
>emb|BX640419.1| Bordetella pertussis strain Tohama I, complete genome; segment 9/12 Length = 349672 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 412 caccaccgcgccgacgccgtcggc 435 ||||||||||||| |||||||||| Sbjct: 300840 caccaccgcgccgccgccgtcggc 300863
>emb|CR376765.12| Zebrafish DNA sequence from clone DKEY-208L2 in linkage group 13, complete sequence Length = 134448 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 241 ggacggacggacggatggag 260 |||||||||||||||||||| Sbjct: 100683 ggacggacggacggatggag 100702
>gb|DQ115907.1| Ajaia ajaja microsatellite Aaju7 sequence Length = 272 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 tggacggacggacggatgga 259 |||||||||||||||||||| Sbjct: 185 tggacggacggacggatgga 166
>emb|BX897741.9| Zebrafish DNA sequence from clone DKEY-273O13 in linkage group 5, complete sequence Length = 168673 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 240 tggacggacggacggatgga 259 |||||||||||||||||||| Sbjct: 107346 tggacggacggacggatgga 107365
>emb|BX511147.12| Zebrafish DNA sequence from clone DKEYP-36E3 in linkage group 25, complete sequence Length = 150385 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 239 atggacggacggacggatgg 258 |||||||||||||||||||| Sbjct: 109961 atggacggacggacggatgg 109980
>gb|AY575969.1| Rhodococcus sp. T104 putative serine-threonine protein kinase, indole oxygenase, putative TetR-family transcriptional regulator, and flavin reductase-like protein genes, complete cds Length = 8842 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 411 tcaccaccgcgccgacgccg 430 |||||||||||||||||||| Sbjct: 2057 tcaccaccgcgccgacgccg 2076
>emb|BX322643.8| Zebrafish DNA sequence from clone CH211-281E1 in linkage group 21, complete sequence Length = 153972 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 239 atggacggacggacggatgg 258 |||||||||||||||||||| Sbjct: 150661 atggacggacggacggatgg 150680
>emb|AL929566.30| Zebrafish DNA sequence from clone CH211-159C13 in linkage group 8, complete sequence Length = 137166 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 240 tggacggacggacggatgga 259 |||||||||||||||||||| Sbjct: 60733 tggacggacggacggatgga 60752
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome Length = 3046682 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 524 ttcttctcgtcgtccgccac 543 |||||||||||||||||||| Sbjct: 2555262 ttcttctcgtcgtccgccac 2555243
>dbj|AK147394.1| Mus musculus cDNA, RIKEN full-length enriched library, clone:M5C1029F22 product:nuclear receptor co-repressor 2, full insert sequence Length = 8660 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 tggacggacggacggatgga 259 |||||||||||||||||||| Sbjct: 7785 tggacggacggacggatgga 7766
>dbj|AK147308.1| Mus musculus 14 days pregnant adult female placenta cDNA, RIKEN full-length enriched library, clone:M5C1011L11 product:nuclear receptor co-repressor 2, full insert sequence Length = 5672 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 tggacggacggacggatgga 259 |||||||||||||||||||| Sbjct: 4795 tggacggacggacggatgga 4776
>dbj|AK161209.1| Mus musculus 0 day neonate head cDNA, RIKEN full-length enriched library, clone:4833412O17 product:hypothetical protein, full insert sequence Length = 1045 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 tggacggacggacggatgga 259 |||||||||||||||||||| Sbjct: 170 tggacggacggacggatgga 151
>dbj|AK168836.1| Mus musculus 17 days pregnant adult female amnion cDNA, RIKEN full-length enriched library, clone:I920059G03 product:hypothetical protein, full insert sequence Length = 1066 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 tggacggacggacggatgga 259 |||||||||||||||||||| Sbjct: 199 tggacggacggacggatgga 180
>dbj|AK154267.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630014A04 product:hypothetical protein, full insert sequence Length = 4492 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 239 atggacggacggacggatgg 258 |||||||||||||||||||| Sbjct: 3001 atggacggacggacggatgg 3020
>dbj|AK087821.1| Mus musculus 2 days pregnant adult female ovary cDNA, RIKEN full-length enriched library, clone:E330024M11 product:hypothetical protein, full insert sequence Length = 4528 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 239 atggacggacggacggatgg 258 |||||||||||||||||||| Sbjct: 3031 atggacggacggacggatgg 3050
>gb|AC148688.1| Macaca mulatta Major Histocompatibility Complex BAC MMU218K02, complete sequence Length = 182826 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 239 atggacggacggacggatgg 258 |||||||||||||||||||| Sbjct: 120738 atggacggacggacggatgg 120757
>ref|XM_624771.1| PREDICTED: Apis mellifera similar to CG32019-PA, isoform A (LOC409821), mRNA Length = 15896 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 447 ccgtcacctgcaccgtcacc 466 |||||||||||||||||||| Sbjct: 2884 ccgtcacctgcaccgtcacc 2865
>dbj|AK131113.1| Mus musculus mRNA for mFLJ00022 protein Length = 4516 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 239 atggacggacggacggatgg 258 |||||||||||||||||||| Sbjct: 3024 atggacggacggacggatgg 3043
>gb|AC083870.2|AC083870 Homo sapiens chromosome 7 clone RP11-248K17, complete sequence Length = 171530 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 239 atggacggacggacggatgg 258 |||||||||||||||||||| Sbjct: 132614 atggacggacggacggatgg 132633
>gb|AC099663.2| Genomic sequence for Mus musculus, clone RP23-36G7, from chromosome 17, complete sequence Length = 78389 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 239 atggacggacggacggatgg 258 |||||||||||||||||||| Sbjct: 48496 atggacggacggacggatgg 48515
>gb|AC079834.8| Homo sapiens BAC clone CTD-2308L22 from 2, complete sequence Length = 108621 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 238 catggacggacggacggatg 257 |||||||||||||||||||| Sbjct: 51714 catggacggacggacggatg 51733
>emb|BX649250.6| Zebrafish DNA sequence from clone DKEY-53B2 in linkage group 20, complete sequence Length = 165729 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 239 atggacggacggacggatgg 258 |||||||||||||||||||| Sbjct: 35575 atggacggacggacggatgg 35594
>emb|BX088727.14| Zebrafish DNA sequence from clone DKEY-218A22 in linkage group 2, complete sequence Length = 185178 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 239 atggacggacggacggatgg 258 |||||||||||||||||||| Sbjct: 42167 atggacggacggacggatgg 42148
>emb|BX649361.2| Mouse DNA sequence from clone RP24-326B24 on chromosome 2, complete sequence Length = 45750 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 239 atggacggacggacggatgg 258 |||||||||||||||||||| Sbjct: 34251 atggacggacggacggatgg 34232
>emb|BX005059.4| Zebrafish DNA sequence from clone CH211-138A6, complete sequence Length = 194603 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 ggacggacggacggatggag 260 |||||||||||||||||||| Sbjct: 7081 ggacggacggacggatggag 7062 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 ggacggacggacggatggag 260 |||||||||||||||||||| Sbjct: 6200 ggacggacggacggatggag 6181
>ref|XM_321060.2| Anopheles gambiae str. PEST ENSANGP00000007854 (ENSANGG00000005922), partial mRNA Length = 1866 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 ccgcggcagccagcgacgag 286 |||||||||||||||||||| Sbjct: 1264 ccgcggcagccagcgacgag 1245
>gb|AC004841.2|AC004841 Homo sapiens PAC clone RP4-607J23 from 7q21.2-q31.1, complete sequence Length = 132072 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 47 caaaccaacccacaaatctaacac 70 ||||||||||||| |||||||||| Sbjct: 76989 caaaccaacccactaatctaacac 77012
>emb|BX649298.7| Zebrafish DNA sequence from clone DKEY-12H2 in linkage group 20, complete sequence Length = 122662 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 240 tggacggacggacggatgga 259 |||||||||||||||||||| Sbjct: 37325 tggacggacggacggatgga 37344
>emb|BX088695.9| Zebrafish DNA sequence from clone DKEY-18E5 in linkage group 25, complete sequence Length = 205870 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 239 atggacggacggacggatgg 258 |||||||||||||||||||| Sbjct: 86976 atggacggacggacggatgg 86957
>gb|AY648560.1| Klebsiella pneumoniae strain M5a1 Orf1 gene, partial cds; LysR-like regulatory protein (mhbR), putative 3-hydroxybenzoate transporter (mhbT), gentisate 1,2-dioxygenase (mhbD), fumarylpyruvate hydrolase (mhbH), maleylpyruvate isomerase (mhbI), 3-hydroxybenzoate-6-hydroxylase (mhbM), and Orf2 genes, complete cds; and Orf3 gene, partial cds Length = 8216 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 410 ttcaccaccgcgccgacgcc 429 |||||||||||||||||||| Sbjct: 4365 ttcaccaccgcgccgacgcc 4346
>gb|AF125671.1|AF125671 Mus musculus silencing mediator of retinoic acid and thyroid hormone receptor extended isoform (Smrte) mRNA, complete cds Length = 8544 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 tggacggacggacggatgga 259 |||||||||||||||||||| Sbjct: 7683 tggacggacggacggatgga 7664
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 7.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 409 gttcaccaccgcgccgacgccgtcggcg 436 |||||||||||||||| |||||||||| Sbjct: 2736564 gttcaccaccgcgccgtggccgtcggcg 2736591
>gb|AC137126.13| Mus musculus chromosome 15, clone RP24-250I9, complete sequence Length = 193459 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 384 tggccttgtcgaagtccatggtcc 407 |||||||||| ||||||||||||| Sbjct: 3338 tggccttgtctaagtccatggtcc 3361
>emb|AJ544719.2|VVI544719 Vitis vinifera partial VPP gene and promoter region Length = 1678 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 236 gccatggacggacggacgga 255 |||||||||||||||||||| Sbjct: 1572 gccatggacggacggacgga 1553
>emb|AL954371.6| Zebrafish DNA sequence from clone CH211-207O15, complete sequence Length = 124954 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 236 gccatggacggacggacgga 255 |||||||||||||||||||| Sbjct: 12797 gccatggacggacggacgga 12778
>emb|BX005384.2| Zebrafish DNA sequence from clone DKEY-114E11, complete sequence Length = 152969 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 239 atggacggacggacggatgg 258 |||||||||||||||||||| Sbjct: 55968 atggacggacggacggatgg 55987 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,005,755 Number of Sequences: 3902068 Number of extensions: 3005755 Number of successful extensions: 82877 Number of sequences better than 10.0: 173 Number of HSP's better than 10.0 without gapping: 173 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 81606 Number of HSP's gapped (non-prelim): 1260 length of query: 543 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 520 effective length of database: 17,143,297,704 effective search space: 8914514806080 effective search space used: 8914514806080 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
