| Clone Name | rbags11i20 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT008941.1| Triticum aestivum clone wdk1c.pk0002.b5:fis, full insert mRNA sequence Length = 697 Score = 652 bits (329), Expect = 0.0 Identities = 456/493 (92%), Gaps = 9/493 (1%) Strand = Plus / Minus Query: 138 aaagtaaagaaggaactgacaaaagtcacggacacgctactcctccttgcaccactcaac 197 |||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||||| | Sbjct: 497 aaagtaaagacggaactgaccaaagtcacggacacgctactcttccttgcaccactcagc 438 Query: 198 tctttctagcattggcacggtaatagtagtcttgttt-gtgcccaaatgccctctgctat 256 |||| |||||| ||||||||||||||||||||| ||| |||||||||||||||||||||| Sbjct: 437 tctt-ctagcactggcacggtaatagtagtcttcttttgtgcccaaatgccctctgctat 379 Query: 257 ctaaaaactaaccatatg----taggtagatggatgga-ttacttgtaaggacctcttct 311 ||||| |||||||||||| |||||||||||||||| ||||||| |||| ||||||| Sbjct: 378 ctaaagactaaccatatgactgtaggtagatggatggaattacttggtaggatctcttct 319 Query: 312 ctgagttcttcctggaacacggctgatgacgatccttgcggctagaacttgttgctgtac 371 |||||||||| || || ||| | ||||| |||| | |||||||||||||||||||||| Sbjct: 318 ctgagttctttctcgagcaccgttgatg--gatcttgacggctagaacttgttgctgtac 261 Query: 372 cagaagacccccttgcggtcctcgggctcaacgtagatgcactccttggcctcgcgccat 431 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 260 cagaagacccccttgcggtcctcgggctcgacgtagatgcactccttggcctcgcgccat 201 Query: 432 gtggccttggcgaccggggtgccgtcaaactggtagtactcgccgaggatgggcttgatc 491 |||||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 200 gtggccttggcgacgggggtggggtcgaactggtagtactcgccgaggatgggcttgatc 141 Query: 492 gccttggtggcctccatggcgtggtagtgcggcatgttggagaagaggtggtgcgccacg 551 |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| Sbjct: 140 gccttggtggcctccatggcgtggtagtgcggcatggtggagaataggtggtgcgccacg 81 Query: 552 tgcgtgtccgtgatgttgtggaacacgcggttgagaatgccgtagtcccggtccatggtg 611 ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 80 tgcgtgtccgtgatgttgtggaacacgcggttgaggatgccgtagtcgcggtccatggtg 21 Query: 612 gcgagcgcccccc 624 || |||||||||| Sbjct: 20 gccagcgcccccc 8 Score = 125 bits (63), Expect = 2e-25 Identities = 63/63 (100%) Strand = Plus / Minus Query: 1 acgaaatggtctacaacaacatgacacggacggggggagatgacgccaatgcaatgacag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 649 acgaaatggtctacaacaacatgacacggacggggggagatgacgccaatgcaatgacag 590 Query: 61 acg 63 ||| Sbjct: 589 acg 587 Score = 42.1 bits (21), Expect = 2.2 Identities = 36/41 (87%) Strand = Plus / Minus Query: 80 ggccatgtcaatggccacggacaccaacaacgaccgccggc 120 ||||||||| | ||||||||||||| || ||||| |||||| Sbjct: 570 ggccatgtccacggccacggacaccgacgacgacagccggc 530
>gb|BT017335.1| Zea mays clone EL01N0321B07.c mRNA sequence Length = 860 Score = 371 bits (187), Expect = 2e-99 Identities = 250/271 (92%) Strand = Plus / Minus Query: 349 gcggctagaacttgttgctgtaccagaagacccccttgcggtcctcgggctcaacgtaga 408 ||||||||||||| ||| ||||||||||||| |||||||||||||||||||| ||||||| Sbjct: 598 gcggctagaacttcttgttgtaccagaagacgcccttgcggtcctcgggctcgacgtaga 539 Query: 409 tgcactccttggcctcgcgccatgtggccttggcgaccggggtgccgtcaaactggtagt 468 |||||||| ||||||||||||| || |||||||| || ||||| ||| || ||||||| Sbjct: 538 tgcactccctggcctcgcgccaggtcgccttggcaacaggggtcgggtcgaagtggtagt 479 Query: 469 actcgccgaggatgggcttgatcgccttggtggcctccatggcgtggtagtgcggcatgt 528 | ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 478 agtcgccgaggatgggcctgatcgccttggtggcctccatggcgtggtagtgcggcatgg 419 Query: 529 tggagaagaggtggtgcgccacgtgcgtgtccgtgatgttgtggaacacgcggttgagaa 588 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | Sbjct: 418 tggagaagaggtggtgcgcgacgtgcgtgtccgtgatgttgtggaacacgcggttgagga 359 Query: 589 tgccgtagtcccggtccatggtggcgagcgc 619 |||||||||| |||||||||||||| ||||| Sbjct: 358 tgccgtagtcgcggtccatggtggccagcgc 328
>gb|AY104050.1| Zea mays PCO088038 mRNA sequence Length = 1856 Score = 363 bits (183), Expect = 5e-97 Identities = 249/271 (91%) Strand = Plus / Minus Query: 349 gcggctagaacttgttgctgtaccagaagacccccttgcggtcctcgggctcaacgtaga 408 ||||||||||||| ||| ||||||||||||| |||||||||||||||||||| ||||||| Sbjct: 1332 gcggctagaacttcttgttgtaccagaagacgcccttgcggtcctcgggctcgacgtaga 1273 Query: 409 tgcactccttggcctcgcgccatgtggccttggcgaccggggtgccgtcaaactggtagt 468 |||||||| ||||||||||||| || |||||||| || ||||| ||| || ||||||| Sbjct: 1272 tgcactccctggcctcgcgccaggtcgccttggcaacaggggtcgggtcgaagtggtagt 1213 Query: 469 actcgccgaggatgggcttgatcgccttggtggcctccatggcgtggtagtgcggcatgt 528 | || |||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1212 agtccccgaggatgggcctgatcgccttggtggcctccatggcgtggtagtgcggcatgg 1153 Query: 529 tggagaagaggtggtgcgccacgtgcgtgtccgtgatgttgtggaacacgcggttgagaa 588 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | Sbjct: 1152 tggagaagaggtggtgcgcgacgtgcgtgtccgtgatgttgtggaacacgcggttgagga 1093 Query: 589 tgccgtagtcccggtccatggtggcgagcgc 619 |||||||||| |||||||||||||| ||||| Sbjct: 1092 tgccgtagtcgcggtccatggtggccagcgc 1062
>gb|DQ496227.1| Zea mays FAD2 (FAD2) gene, complete cds Length = 1164 Score = 347 bits (175), Expect = 3e-92 Identities = 244/267 (91%) Strand = Plus / Minus Query: 353 ctagaacttgttgctgtaccagaagacccccttgcggtcctcgggctcaacgtagatgca 412 ||||||||| ||| ||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 1164 ctagaacttcttgttgtaccagaagacgcccttgcggtcctcgggctcgacgtagatgca 1105 Query: 413 ctccttggcctcgcgccatgtggccttggcgaccggggtgccgtcaaactggtagtactc 472 ||| |||||||||||| || |||||||| || ||||| ||| || |||||||| || Sbjct: 1104 ttccccggcctcgcgccaggtcgccttggccacaggggtcgggtcgaagtggtagtagtc 1045 Query: 473 gccgaggatgggcttgatcgccttggtggcctccatggcgtggtagtgcggcatgttgga 532 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 1044 gccgaggatgggcctgatcgccttggtggcctccatggcgtggtagtgcggcatggtgga 985 Query: 533 gaagaggtggtgcgccacgtgcgtgtccgtgatgttgtggaacacgcggttgagaatgcc 592 ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 984 gaagaggtggtgcgcgacgtgcgtgtccgtgatgttgtggaacacgcggttgaggatgcc 925 Query: 593 gtagtcccggtccatggtggcgagcgc 619 |||||| |||||||||||||| ||||| Sbjct: 924 gtagtcgcggtccatggtggccagcgc 898
>dbj|AB257309.1| Zea mays FAD2 gene for delta-12 fatty acid desaturase, complete cds Length = 1164 Score = 347 bits (175), Expect = 3e-92 Identities = 244/267 (91%) Strand = Plus / Minus Query: 353 ctagaacttgttgctgtaccagaagacccccttgcggtcctcgggctcaacgtagatgca 412 ||||||||| ||| ||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct: 1164 ctagaacttcttgttgtaccagaagacgcccttgcggtcctcgggctcgacgtagatgca 1105 Query: 413 ctccttggcctcgcgccatgtggccttggcgaccggggtgccgtcaaactggtagtactc 472 ||| |||||||||||| || |||||||| || ||||| ||| || |||||||| || Sbjct: 1104 ttccccggcctcgcgccaggtcgccttggccacaggggtcgggtcgaagtggtagtagtc 1045 Query: 473 gccgaggatgggcttgatcgccttggtggcctccatggcgtggtagtgcggcatgttgga 532 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 1044 gccgaggatgggcctgatcgccttggtggcctccatggcgtggtagtgcggcatggtgga 985 Query: 533 gaagaggtggtgcgccacgtgcgtgtccgtgatgttgtggaacacgcggttgagaatgcc 592 ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 984 gaagaggtggtgcgcgacgtgcgtgtccgtgatgttgtggaacacgcggttgaggatgcc 925 Query: 593 gtagtcccggtccatggtggcgagcgc 619 |||||| |||||||||||||| ||||| Sbjct: 924 gtagtcgcggtccatggtggccagcgc 898
>gb|AY581826.1| Cynodon dactylon putative delta-12 oleate desaturase-like mRNA, partial sequence Length = 1037 Score = 329 bits (166), Expect = 6e-87 Identities = 247/274 (90%) Strand = Plus / Minus Query: 354 tagaacttgttgctgtaccagaagacccccttgcggtcctcgggctcaacgtagatgcac 413 |||||||||||| ||||||| ||||| |||||||||||||| ||||| |||||||||||| Sbjct: 666 tagaacttgttgttgtaccaaaagacgcccttgcggtcctcaggctcgacgtagatgcac 607 Query: 414 tccttggcctcgcgccatgtggccttggcgaccggggtgccgtcaaactggtagtactcg 473 ||||||||||||||||| || |||||||| || || ||| ||| ||||||||||| ||| Sbjct: 606 tccttggcctcgcgccacgtcgccttggccacgggcgtggggtcgaactggtagtagtcg 547 Query: 474 ccgaggatgggcttgatcgccttggtggcctccatggcgtggtagtgcggcatgttggag 533 || ||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||||| Sbjct: 546 ccaaggatgggcctgatcgccttggtcgcctccatggcgtggtagtgcggcatggtggag 487 Query: 534 aagaggtggtgcgccacgtgcgtgtccgtgatgttgtggaacacgcggttgagaatgccg 593 |||||||||||||| ||||||||||||||||||||||| ||||| |||||| |||||| Sbjct: 486 aagaggtggtgcgcgacgtgcgtgtccgtgatgttgtgaaacaccttgttgaggatgccg 427 Query: 594 tagtcccggtccatggtggcgagcgccccccgca 627 ||||| |||||||||||||| |||||||| |||| Sbjct: 426 tagtcgcggtccatggtggccagcgccccgcgca 393
>ref|XM_467474.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1701 Score = 321 bits (162), Expect = 2e-84 Identities = 240/266 (90%) Strand = Plus / Minus Query: 354 tagaacttgttgctgtaccagaagacccccttgcggtcctcgggctcaacgtagatgcac 413 |||||||||||| ||||||||||||| |||||| |||||| ||||| |||||||||||| Sbjct: 1326 tagaacttgttgttgtaccagaagacgcccttgttgtcctcaggctcgacgtagatgcac 1267 Query: 414 tccttggcctcgcgccatgtggccttggcgaccggggtgccgtcaaactggtagtactcg 473 |||||||||||||||||||| ||||||||||| || || ||| ||||||||||||||| Sbjct: 1266 tccttggcctcgcgccatgtcgccttggcgacgggcgtcgggtcgaactggtagtactcg 1207 Query: 474 ccgaggatgggcttgatcgccttggtggcctccatggcgtggtagtgcggcatgttggag 533 ||||||||||| ||||||||| |||||||||||||||||||||||||||||| ||||| Sbjct: 1206 ccgaggatggggcggatcgccttagtggcctccatggcgtggtagtgcggcatggtggag 1147 Query: 534 aagaggtggtgcgccacgtgcgtgtccgtgatgttgtggaacacgcggttgagaatgccg 593 |||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||| Sbjct: 1146 aagaggtggtgcgcgacgtgcgtgtccgtgatgttgtggaacaccttgttgaggatgccg 1087 Query: 594 tagtcccggtccatggtggcgagcgc 619 ||||| ||||||| |||||| ||||| Sbjct: 1086 tagtcgcggtccacggtggccagcgc 1061
>ref|XM_506939.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1191_G08.29 mRNA Length = 1856 Score = 321 bits (162), Expect = 2e-84 Identities = 240/266 (90%) Strand = Plus / Minus Query: 354 tagaacttgttgctgtaccagaagacccccttgcggtcctcgggctcaacgtagatgcac 413 |||||||||||| ||||||||||||| |||||| |||||| ||||| |||||||||||| Sbjct: 1324 tagaacttgttgttgtaccagaagacgcccttgttgtcctcaggctcgacgtagatgcac 1265 Query: 414 tccttggcctcgcgccatgtggccttggcgaccggggtgccgtcaaactggtagtactcg 473 |||||||||||||||||||| ||||||||||| || || ||| ||||||||||||||| Sbjct: 1264 tccttggcctcgcgccatgtcgccttggcgacgggcgtcgggtcgaactggtagtactcg 1205 Query: 474 ccgaggatgggcttgatcgccttggtggcctccatggcgtggtagtgcggcatgttggag 533 ||||||||||| ||||||||| |||||||||||||||||||||||||||||| ||||| Sbjct: 1204 ccgaggatggggcggatcgccttagtggcctccatggcgtggtagtgcggcatggtggag 1145 Query: 534 aagaggtggtgcgccacgtgcgtgtccgtgatgttgtggaacacgcggttgagaatgccg 593 |||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||| Sbjct: 1144 aagaggtggtgcgcgacgtgcgtgtccgtgatgttgtggaacaccttgttgaggatgccg 1085 Query: 594 tagtcccggtccatggtggcgagcgc 619 ||||| ||||||| |||||| ||||| Sbjct: 1084 tagtcgcggtccacggtggccagcgc 1059
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 321 bits (162), Expect = 2e-84 Identities = 240/266 (90%) Strand = Plus / Plus Query: 354 tagaacttgttgctgtaccagaagacccccttgcggtcctcgggctcaacgtagatgcac 413 |||||||||||| ||||||||||||| |||||| |||||| ||||| |||||||||||| Sbjct: 29744369 tagaacttgttgttgtaccagaagacgcccttgttgtcctcaggctcgacgtagatgcac 29744428 Query: 414 tccttggcctcgcgccatgtggccttggcgaccggggtgccgtcaaactggtagtactcg 473 |||||||||||||||||||| ||||||||||| || || ||| ||||||||||||||| Sbjct: 29744429 tccttggcctcgcgccatgtcgccttggcgacgggcgtcgggtcgaactggtagtactcg 29744488 Query: 474 ccgaggatgggcttgatcgccttggtggcctccatggcgtggtagtgcggcatgttggag 533 ||||||||||| ||||||||| |||||||||||||||||||||||||||||| ||||| Sbjct: 29744489 ccgaggatggggcggatcgccttagtggcctccatggcgtggtagtgcggcatggtggag 29744548 Query: 534 aagaggtggtgcgccacgtgcgtgtccgtgatgttgtggaacacgcggttgagaatgccg 593 |||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||| Sbjct: 29744549 aagaggtggtgcgcgacgtgcgtgtccgtgatgttgtggaacaccttgttgaggatgccg 29744608 Query: 594 tagtcccggtccatggtggcgagcgc 619 ||||| ||||||| |||||| ||||| Sbjct: 29744609 tagtcgcggtccacggtggccagcgc 29744634
>dbj|AP004098.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ2056_H01 Length = 123428 Score = 321 bits (162), Expect = 2e-84 Identities = 240/266 (90%) Strand = Plus / Plus Query: 354 tagaacttgttgctgtaccagaagacccccttgcggtcctcgggctcaacgtagatgcac 413 |||||||||||| ||||||||||||| |||||| |||||| ||||| |||||||||||| Sbjct: 714 tagaacttgttgttgtaccagaagacgcccttgttgtcctcaggctcgacgtagatgcac 773 Query: 414 tccttggcctcgcgccatgtggccttggcgaccggggtgccgtcaaactggtagtactcg 473 |||||||||||||||||||| ||||||||||| || || ||| ||||||||||||||| Sbjct: 774 tccttggcctcgcgccatgtcgccttggcgacgggcgtcgggtcgaactggtagtactcg 833 Query: 474 ccgaggatgggcttgatcgccttggtggcctccatggcgtggtagtgcggcatgttggag 533 ||||||||||| ||||||||| |||||||||||||||||||||||||||||| ||||| Sbjct: 834 ccgaggatggggcggatcgccttagtggcctccatggcgtggtagtgcggcatggtggag 893 Query: 534 aagaggtggtgcgccacgtgcgtgtccgtgatgttgtggaacacgcggttgagaatgccg 593 |||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||| Sbjct: 894 aagaggtggtgcgcgacgtgcgtgtccgtgatgttgtggaacaccttgttgaggatgccg 953 Query: 594 tagtcccggtccatggtggcgagcgc 619 ||||| ||||||| |||||| ||||| Sbjct: 954 tagtcgcggtccacggtggccagcgc 979
>dbj|AP004047.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1191_G08 Length = 172832 Score = 321 bits (162), Expect = 2e-84 Identities = 240/266 (90%) Strand = Plus / Plus Query: 354 tagaacttgttgctgtaccagaagacccccttgcggtcctcgggctcaacgtagatgcac 413 |||||||||||| ||||||||||||| |||||| |||||| ||||| |||||||||||| Sbjct: 113348 tagaacttgttgttgtaccagaagacgcccttgttgtcctcaggctcgacgtagatgcac 113407 Query: 414 tccttggcctcgcgccatgtggccttggcgaccggggtgccgtcaaactggtagtactcg 473 |||||||||||||||||||| ||||||||||| || || ||| ||||||||||||||| Sbjct: 113408 tccttggcctcgcgccatgtcgccttggcgacgggcgtcgggtcgaactggtagtactcg 113467 Query: 474 ccgaggatgggcttgatcgccttggtggcctccatggcgtggtagtgcggcatgttggag 533 ||||||||||| ||||||||| |||||||||||||||||||||||||||||| ||||| Sbjct: 113468 ccgaggatggggcggatcgccttagtggcctccatggcgtggtagtgcggcatggtggag 113527 Query: 534 aagaggtggtgcgccacgtgcgtgtccgtgatgttgtggaacacgcggttgagaatgccg 593 |||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||| Sbjct: 113528 aagaggtggtgcgcgacgtgcgtgtccgtgatgttgtggaacaccttgttgaggatgccg 113587 Query: 594 tagtcccggtccatggtggcgagcgc 619 ||||| ||||||| |||||| ||||| Sbjct: 113588 tagtcgcggtccacggtggccagcgc 113613
>dbj|AK072282.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023010C06, full insert sequence Length = 1700 Score = 321 bits (162), Expect = 2e-84 Identities = 240/266 (90%) Strand = Plus / Minus Query: 354 tagaacttgttgctgtaccagaagacccccttgcggtcctcgggctcaacgtagatgcac 413 |||||||||||| ||||||||||||| |||||| |||||| ||||| |||||||||||| Sbjct: 1325 tagaacttgttgttgtaccagaagacgcccttgttgtcctcaggctcgacgtagatgcac 1266 Query: 414 tccttggcctcgcgccatgtggccttggcgaccggggtgccgtcaaactggtagtactcg 473 |||||||||||||||||||| ||||||||||| || || ||| ||||||||||||||| Sbjct: 1265 tccttggcctcgcgccatgtcgccttggcgacgggcgtcgggtcgaactggtagtactcg 1206 Query: 474 ccgaggatgggcttgatcgccttggtggcctccatggcgtggtagtgcggcatgttggag 533 ||||||||||| ||||||||| |||||||||||||||||||||||||||||| ||||| Sbjct: 1205 ccgaggatggggcggatcgccttagtggcctccatggcgtggtagtgcggcatggtggag 1146 Query: 534 aagaggtggtgcgccacgtgcgtgtccgtgatgttgtggaacacgcggttgagaatgccg 593 |||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||| Sbjct: 1145 aagaggtggtgcgcgacgtgcgtgtccgtgatgttgtggaacaccttgttgaggatgccg 1086 Query: 594 tagtcccggtccatggtggcgagcgc 619 ||||| ||||||| |||||| ||||| Sbjct: 1085 tagtcgcggtccacggtggccagcgc 1060
>dbj|AK061506.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-F04, full insert sequence Length = 1177 Score = 321 bits (162), Expect = 2e-84 Identities = 240/266 (90%) Strand = Plus / Minus Query: 354 tagaacttgttgctgtaccagaagacccccttgcggtcctcgggctcaacgtagatgcac 413 |||||||||||| ||||||||||||| |||||| |||||| ||||| |||||||||||| Sbjct: 630 tagaacttgttgttgtaccagaagacgcccttgttgtcctcaggctcgacgtagatgcac 571 Query: 414 tccttggcctcgcgccatgtggccttggcgaccggggtgccgtcaaactggtagtactcg 473 |||||||||||||||||||| ||||||||||| || || ||| ||||||||||||||| Sbjct: 570 tccttggcctcgcgccatgtcgccttggcgacgggcgtcgggtcgaactggtagtactcg 511 Query: 474 ccgaggatgggcttgatcgccttggtggcctccatggcgtggtagtgcggcatgttggag 533 ||||||||||| ||||||||| |||||||||||||||||||||||||||||| ||||| Sbjct: 510 ccgaggatggggcggatcgccttagtggcctccatggcgtggtagtgcggcatggtggag 451 Query: 534 aagaggtggtgcgccacgtgcgtgtccgtgatgttgtggaacacgcggttgagaatgccg 593 |||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||| Sbjct: 450 aagaggtggtgcgcgacgtgcgtgtccgtgatgttgtggaacaccttgttgaggatgccg 391 Query: 594 tagtcccggtccatggtggcgagcgc 619 ||||| ||||||| |||||| ||||| Sbjct: 390 tagtcgcggtccacggtggccagcgc 365
>dbj|AK065239.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002I05, full insert sequence Length = 1856 Score = 313 bits (158), Expect = 4e-82 Identities = 239/266 (89%) Strand = Plus / Minus Query: 354 tagaacttgttgctgtaccagaagacccccttgcggtcctcgggctcaacgtagatgcac 413 |||||||||||| ||||||||||||| |||||| |||||| ||||| |||||||||||| Sbjct: 1324 tagaacttgttgttgtaccagaagacgcccttgttgtcctcaggctcgacgtagatgcac 1265 Query: 414 tccttggcctcgcgccatgtggccttggcgaccggggtgccgtcaaactggtagtactcg 473 |||||||||||||||||||| ||||||||||| || || ||| ||||||||||||||| Sbjct: 1264 tccttggcctcgcgccatgtcgccttggcgacgggcgtcgggtcgaactggtagtactcg 1205 Query: 474 ccgaggatgggcttgatcgccttggtggcctccatggcgtggtagtgcggcatgttggag 533 ||||||||||| ||||||||| |||||||||||||||||||||||||||||| ||||| Sbjct: 1204 ccgaggatggggcggatcgccttagtggcctccatggcgtggtagtgcggcatggtggag 1145 Query: 534 aagaggtggtgcgccacgtgcgtgtccgtgatgttgtggaacacgcggttgagaatgccg 593 ||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||| Sbjct: 1144 gagaggtggtgcgcgacgtgcgtgtccgtgatgttgtggaacaccttgttgaggatgccg 1085 Query: 594 tagtcccggtccatggtggcgagcgc 619 ||||| ||||||| |||||| ||||| Sbjct: 1084 tagtcgcggtccacggtggccagcgc 1059
>gb|AY108438.1| Zea mays PCO088036 mRNA sequence Length = 777 Score = 305 bits (154), Expect = 9e-80 Identities = 246/277 (88%), Gaps = 6/277 (2%) Strand = Plus / Minus Query: 349 gcggctagaacttgttgctgtaccagaagacccccttgcggtc------ctcgggctcaa 402 |||||||||||||| || ||||||||||||| |||||||||| ||| ||||| | Sbjct: 352 gcggctagaacttgctgttgtaccagaagacgcccttgcggttgcggttctcaggctcga 293 Query: 403 cgtagatgcactccttggcctcgcgccatgtggccttggcgaccggggtgccgtcaaact 462 |||||||||||||| ||||||||||||| |||||||||||||| ||||| ||| |||| Sbjct: 292 cgtagatgcactccctggcctcgcgccaggtggccttggcgacaggggtcgggtcgaact 233 Query: 463 ggtagtactcgccgaggatgggcttgatcgccttggtggcctccatggcgtggtagtgcg 522 |||||||||||||||||| |||| |||||||| |||||||||||| |||||||||||||| Sbjct: 232 ggtagtactcgccgaggacgggcctgatcgccctggtggcctccacggcgtggtagtgcg 173 Query: 523 gcatgttggagaagaggtggtgcgccacgtgcgtgtccgtgatgttgtggaacacgcggt 582 ||||| ||||||||||||||||||| ||||||||||||||||||| |||||||||||||| Sbjct: 172 gcatggtggagaagaggtggtgcgcgacgtgcgtgtccgtgatgtggtggaacacgcggt 113 Query: 583 tgagaatgccgtagtcccggtccatggtggcgagcgc 619 |||| | ||||||||| ||||| | |||||||||||| Sbjct: 112 tgaggacgccgtagtctcggtcgacggtggcgagcgc 76
>gb|BT018494.1| Zea mays clone EL01N0425H05.d mRNA sequence Length = 1686 Score = 297 bits (150), Expect = 2e-77 Identities = 245/277 (88%), Gaps = 6/277 (2%) Strand = Plus / Minus Query: 349 gcggctagaacttgttgctgtaccagaagacccccttgcggtc------ctcgggctcaa 402 |||||||||||||| || ||||||||||||| |||||||||| ||| ||||| | Sbjct: 1265 gcggctagaacttgctgttgtaccagaagacgcccttgcggttgcggttctcaggctcga 1206 Query: 403 cgtagatgcactccttggcctcgcgccatgtggccttggcgaccggggtgccgtcaaact 462 |||||||||||||| ||||||||||||| |||||||||||||| ||||| ||| |||| Sbjct: 1205 cgtagatgcactccctggcctcgcgccaggtggccttggcgacaggggtcgggtcgaact 1146 Query: 463 ggtagtactcgccgaggatgggcttgatcgccttggtggcctccatggcgtggtagtgcg 522 ||||||| |||||||||| |||| |||||||| |||||||||||| |||||||||||||| Sbjct: 1145 ggtagtagtcgccgaggacgggcctgatcgccctggtggcctccacggcgtggtagtgcg 1086 Query: 523 gcatgttggagaagaggtggtgcgccacgtgcgtgtccgtgatgttgtggaacacgcggt 582 ||||| ||||||||||||||||||| ||||||||||||||||||| |||||||||||||| Sbjct: 1085 gcatggtggagaagaggtggtgcgcgacgtgcgtgtccgtgatgtggtggaacacgcggt 1026 Query: 583 tgagaatgccgtagtcccggtccatggtggcgagcgc 619 |||| | ||||||||| ||||| | |||||||||||| Sbjct: 1025 tgaggacgccgtagtcgcggtcgacggtggcgagcgc 989
>gb|BT016850.1| Zea mays clone Contig683 mRNA sequence Length = 790 Score = 297 bits (150), Expect = 2e-77 Identities = 245/277 (88%), Gaps = 6/277 (2%) Strand = Plus / Plus Query: 349 gcggctagaacttgttgctgtaccagaagacccccttgcggtc------ctcgggctcaa 402 |||||||||||||| || ||||||||||||| |||||||||| ||| ||||| | Sbjct: 433 gcggctagaacttgctgttgtaccagaagacgcccttgcggttgcggttctcaggctcga 492 Query: 403 cgtagatgcactccttggcctcgcgccatgtggccttggcgaccggggtgccgtcaaact 462 |||||||||||||| ||||||||||||| |||||||||||||| ||||| ||| |||| Sbjct: 493 cgtagatgcactccctggcctcgcgccaggtggccttggcgacaggggtcgggtcgaact 552 Query: 463 ggtagtactcgccgaggatgggcttgatcgccttggtggcctccatggcgtggtagtgcg 522 ||||||| |||||||||| |||| |||||||| |||||||||||| |||||||||||||| Sbjct: 553 ggtagtagtcgccgaggacgggcctgatcgccctggtggcctccacggcgtggtagtgcg 612 Query: 523 gcatgttggagaagaggtggtgcgccacgtgcgtgtccgtgatgttgtggaacacgcggt 582 ||||| ||||||||||||||||||| ||||||||||||||||||| |||||||||||||| Sbjct: 613 gcatggtggagaagaggtggtgcgcgacgtgcgtgtccgtgatgtggtggaacacgcggt 672 Query: 583 tgagaatgccgtagtcccggtccatggtggcgagcgc 619 |||| | ||||||||| ||||| | |||||||||||| Sbjct: 673 tgaggacgccgtagtcgcggtcgacggtggcgagcgc 709
>gb|AF457960.1| Zea mays clone csi1n.pk0007.c2, mRNA sequence Length = 590 Score = 264 bits (133), Expect = 3e-67 Identities = 228/253 (90%), Gaps = 5/253 (1%) Strand = Plus / Minus Query: 367 tgtaccagaagacccccttgcggtcctcgggctcaacgtagatgcactccttggcctcgc 426 ||||||||| ||| ||||||||||||||||| || | ||||||||||||| || |||||| Sbjct: 393 tgtaccaga-gacgcccttgcggtcctcggg-tcga-gtagatgcactccctg-cctcgc 338 Query: 427 gccatgtggccttggcgaccggggtgccgtcaaactggtagtactcgccgaggatgggct 486 |||| || |||||||| || ||| | ||| || |||||||| || |||||||||||| Sbjct: 337 gccaggtcgccttggcaacagggtcgg-gtcgaagtggtagtagtccccgaggatgggcc 279 Query: 487 tgatcgccttggtggcctccatggcgtggtagtgcggcatgttggagaagaggtggtgcg 546 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 278 tgatcgccttggtggcctccatggcgtggtagtgcggcatggtggagaagaggtggtgcg 219 Query: 547 ccacgtgcgtgtccgtgatgttgtggaacacgcggttgagaatgccgtagtcccggtcca 606 | |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| Sbjct: 218 cgacgtgcgtgtccgtgatgttgtggaacacgcggttgaggatgccgtagtcgcggtcca 159 Query: 607 tggtggcgagcgc 619 ||||||| ||||| Sbjct: 158 tggtggccagcgc 146
>ref|NM_188189.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1360 Score = 220 bits (111), Expect = 4e-54 Identities = 234/275 (85%) Strand = Plus / Minus Query: 353 ctagaacttgttgctgtaccagaagacccccttgcggtcctcgggctcaacgtagatgca 412 ||||||||||||||||||||||||||| |||||| ||||||||| || | ||||||||| Sbjct: 1226 ctagaacttgttgctgtaccagaagacgcccttgtggtcctcggactggatgtagatgca 1167 Query: 413 ctccttggcctcgcgccatgtggccttggcgaccggggtgccgtcaaactggtagtactc 472 |||||| |||||||||||| | |||||| ||| || ||| || |||||||||||||| Sbjct: 1166 ctccttagcctcgcgccatatcgccttgacgatgggtgtgggatcgaactggtagtactc 1107 Query: 473 gccgaggatgggcttgatcgccttggtggcctccatggcgtggtagtgcggcatgttgga 532 ||||||||| || |||||||||||| ||||||| |||||||||||||| ||| | | Sbjct: 1106 gccgaggatagggcggatcgccttggtcgcctccacagcgtggtagtgcgggatggtagg 1047 Query: 533 gaagaggtggtgcgccacgtgcgtgtccgtgatgttgtggaacacgcggttgagaatgcc 592 ||| ||||||||| | ||||| ||||||||||||||||| ||||| ||||| || | || Sbjct: 1046 gaacaggtggtgcacgacgtgtgtgtccgtgatgttgtgaaacactcggttaaggaagct 987 Query: 593 gtagtcccggtccatggtggcgagcgccccccgca 627 |||||| ||||||| ||||||||||||||| |||| Sbjct: 986 gtagtcgcggtccacggtggcgagcgccccgcgca 952
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 220 bits (111), Expect = 4e-54 Identities = 234/275 (85%) Strand = Plus / Plus Query: 353 ctagaacttgttgctgtaccagaagacccccttgcggtcctcgggctcaacgtagatgca 412 ||||||||||||||||||||||||||| |||||| ||||||||| || | ||||||||| Sbjct: 13147741 ctagaacttgttgctgtaccagaagacgcccttgtggtcctcggactggatgtagatgca 13147800 Query: 413 ctccttggcctcgcgccatgtggccttggcgaccggggtgccgtcaaactggtagtactc 472 |||||| |||||||||||| | |||||| ||| || ||| || |||||||||||||| Sbjct: 13147801 ctccttagcctcgcgccatatcgccttgacgatgggtgtgggatcgaactggtagtactc 13147860 Query: 473 gccgaggatgggcttgatcgccttggtggcctccatggcgtggtagtgcggcatgttgga 532 ||||||||| || |||||||||||| ||||||| |||||||||||||| ||| | | Sbjct: 13147861 gccgaggatagggcggatcgccttggtcgcctccacagcgtggtagtgcgggatggtagg 13147920 Query: 533 gaagaggtggtgcgccacgtgcgtgtccgtgatgttgtggaacacgcggttgagaatgcc 592 ||| ||||||||| | ||||| ||||||||||||||||| ||||| ||||| || | || Sbjct: 13147921 gaacaggtggtgcacgacgtgtgtgtccgtgatgttgtgaaacactcggttaaggaagct 13147980 Query: 593 gtagtcccggtccatggtggcgagcgccccccgca 627 |||||| ||||||| ||||||||||||||| |||| Sbjct: 13147981 gtagtcgcggtccacggtggcgagcgccccgcgca 13148015 Score = 180 bits (91), Expect = 4e-42 Identities = 223/267 (83%) Strand = Plus / Minus Query: 352 gctagaacttgttgctgtaccagaagacccccttgcggtcctcgggctcaacgtagatgc 411 |||| ||||||||| |||||||| ||| || | ||| ||| |||||||||||| |||| Sbjct: 13170862 gctaaaacttgttgttgtaccagtagataccatcgcgctccctgggctcaacgtacatgc 13170803 Query: 412 actccttggcctcgcgccatgtggccttggcgaccggggtgccgtcaaactggtagtact 471 ||||||||||||| |||||||| |||| | || || |||| |||||||| |||||||| Sbjct: 13170802 actccttggcctcacgccatgttgcctcgatgatgggcgtgcggtcaaacttgtagtact 13170743 Query: 472 cgccgaggatgggcttgatcgccttggtggcctccatggcgtggtagtgcggcatgttgg 531 | ||||||| |||| | ||| ||||||||||||||||||||||||| |||||| ||| Sbjct: 13170742 caccgaggacgggcctcgctgccctggtggcctccatggcgtggtagtgtggcatgctgg 13170683 Query: 532 agaagaggtggtgcgccacgtgcgtgtccgtgatgttgtggaacacgcggttgagaatgc 591 |||||||||||| |||||||||||||||| |||||| | |||||||||||| | || Sbjct: 13170682 ggaagaggtggtggaggacgtgcgtgtccgtgacgttgtgcagcacgcggttgaggacgc 13170623 Query: 592 cgtagtcccggtccatggtggcgagcg 618 ||||||| ||||| | ||||||||||| Sbjct: 13170622 cgtagtcgcggtcgacggtggcgagcg 13170596 Score = 172 bits (87), Expect = 9e-40 Identities = 217/259 (83%), Gaps = 1/259 (0%) Strand = Plus / Plus Query: 353 ctagaacttgttgctgtaccagaagacccccttgcggtcctcgggctcaacgtagatgca 412 |||||||||||||| |||||||||||| |||||| |||||| || || | ||||||||| Sbjct: 13127274 ctagaacttgttgcagtaccagaagacgcccttgtggtccttggactggatgtagatgca 13127333 Query: 413 ctccttggcctcgcgccatgtggccttggcgaccggggtgccgtcaaactggtagtactc 472 |||||| |||||||||||| | |||||| |||| || ||| ||| |||||||||||||| Sbjct: 13127334 ctccttagcctcgcgccatatcgccttgacgacgggtgtggggtcgaactggtagtactc 13127393 Query: 473 gccgaggatgggcttgatcgccttggtggcctccatggcgtggtagtgcggcatgttgga 532 | ||||| ||| | |||| ||||||| ||||||| |||||||||||| ||| | | Sbjct: 13127394 tctgaggacggg-tggatcaccttggtcgcctccaccatgtggtagtgcgggatggtagg 13127452 Query: 533 gaagaggtggtgcgccacgtgcgtgtccgtgatgttgtggaacacgcggttgagaatgcc 592 ||| | ||||||||| |||||||| |||||||| ||||||||||| |||||||| | ||| Sbjct: 13127453 gaacatgtggtgcgcgacgtgcgtatccgtgatattgtggaacactcggttgaggaagcc 13127512 Query: 593 gtagtcccggtccatggtg 611 |||||| ||||||| |||| Sbjct: 13127513 gtagtcgcggtccacggtg 13127531
>dbj|AP005168.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0066B06 Length = 154025 Score = 220 bits (111), Expect = 4e-54 Identities = 234/275 (85%) Strand = Plus / Plus Query: 353 ctagaacttgttgctgtaccagaagacccccttgcggtcctcgggctcaacgtagatgca 412 ||||||||||||||||||||||||||| |||||| ||||||||| || | ||||||||| Sbjct: 66068 ctagaacttgttgctgtaccagaagacgcccttgtggtcctcggactggatgtagatgca 66127 Query: 413 ctccttggcctcgcgccatgtggccttggcgaccggggtgccgtcaaactggtagtactc 472 |||||| |||||||||||| | |||||| ||| || ||| || |||||||||||||| Sbjct: 66128 ctccttagcctcgcgccatatcgccttgacgatgggtgtgggatcgaactggtagtactc 66187 Query: 473 gccgaggatgggcttgatcgccttggtggcctccatggcgtggtagtgcggcatgttgga 532 ||||||||| || |||||||||||| ||||||| |||||||||||||| ||| | | Sbjct: 66188 gccgaggatagggcggatcgccttggtcgcctccacagcgtggtagtgcgggatggtagg 66247 Query: 533 gaagaggtggtgcgccacgtgcgtgtccgtgatgttgtggaacacgcggttgagaatgcc 592 ||| ||||||||| | ||||| ||||||||||||||||| ||||| ||||| || | || Sbjct: 66248 gaacaggtggtgcacgacgtgtgtgtccgtgatgttgtgaaacactcggttaaggaagct 66307 Query: 593 gtagtcccggtccatggtggcgagcgccccccgca 627 |||||| ||||||| ||||||||||||||| |||| Sbjct: 66308 gtagtcgcggtccacggtggcgagcgccccgcgca 66342 Score = 180 bits (91), Expect = 4e-42 Identities = 223/267 (83%) Strand = Plus / Minus Query: 352 gctagaacttgttgctgtaccagaagacccccttgcggtcctcgggctcaacgtagatgc 411 |||| ||||||||| |||||||| ||| || | ||| ||| |||||||||||| |||| Sbjct: 89189 gctaaaacttgttgttgtaccagtagataccatcgcgctccctgggctcaacgtacatgc 89130 Query: 412 actccttggcctcgcgccatgtggccttggcgaccggggtgccgtcaaactggtagtact 471 ||||||||||||| |||||||| |||| | || || |||| |||||||| |||||||| Sbjct: 89129 actccttggcctcacgccatgttgcctcgatgatgggcgtgcggtcaaacttgtagtact 89070 Query: 472 cgccgaggatgggcttgatcgccttggtggcctccatggcgtggtagtgcggcatgttgg 531 | ||||||| |||| | ||| ||||||||||||||||||||||||| |||||| ||| Sbjct: 89069 caccgaggacgggcctcgctgccctggtggcctccatggcgtggtagtgtggcatgctgg 89010 Query: 532 agaagaggtggtgcgccacgtgcgtgtccgtgatgttgtggaacacgcggttgagaatgc 591 |||||||||||| |||||||||||||||| |||||| | |||||||||||| | || Sbjct: 89009 ggaagaggtggtggaggacgtgcgtgtccgtgacgttgtgcagcacgcggttgaggacgc 88950 Query: 592 cgtagtcccggtccatggtggcgagcg 618 ||||||| ||||| | ||||||||||| Sbjct: 88949 cgtagtcgcggtcgacggtggcgagcg 88923 Score = 172 bits (87), Expect = 9e-40 Identities = 217/259 (83%), Gaps = 1/259 (0%) Strand = Plus / Plus Query: 353 ctagaacttgttgctgtaccagaagacccccttgcggtcctcgggctcaacgtagatgca 412 |||||||||||||| |||||||||||| |||||| |||||| || || | ||||||||| Sbjct: 45601 ctagaacttgttgcagtaccagaagacgcccttgtggtccttggactggatgtagatgca 45660 Query: 413 ctccttggcctcgcgccatgtggccttggcgaccggggtgccgtcaaactggtagtactc 472 |||||| |||||||||||| | |||||| |||| || ||| ||| |||||||||||||| Sbjct: 45661 ctccttagcctcgcgccatatcgccttgacgacgggtgtggggtcgaactggtagtactc 45720 Query: 473 gccgaggatgggcttgatcgccttggtggcctccatggcgtggtagtgcggcatgttgga 532 | ||||| ||| | |||| ||||||| ||||||| |||||||||||| ||| | | Sbjct: 45721 tctgaggacggg-tggatcaccttggtcgcctccaccatgtggtagtgcgggatggtagg 45779 Query: 533 gaagaggtggtgcgccacgtgcgtgtccgtgatgttgtggaacacgcggttgagaatgcc 592 ||| | ||||||||| |||||||| |||||||| ||||||||||| |||||||| | ||| Sbjct: 45780 gaacatgtggtgcgcgacgtgcgtatccgtgatattgtggaacactcggttgaggaagcc 45839 Query: 593 gtagtcccggtccatggtg 611 |||||| ||||||| |||| Sbjct: 45840 gtagtcgcggtccacggtg 45858
>dbj|AK070559.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023060M02, full insert sequence Length = 1361 Score = 220 bits (111), Expect = 4e-54 Identities = 234/275 (85%) Strand = Plus / Minus Query: 353 ctagaacttgttgctgtaccagaagacccccttgcggtcctcgggctcaacgtagatgca 412 ||||||||||||||||||||||||||| |||||| ||||||||| || | ||||||||| Sbjct: 1227 ctagaacttgttgctgtaccagaagacgcccttgtggtcctcggactggatgtagatgca 1168 Query: 413 ctccttggcctcgcgccatgtggccttggcgaccggggtgccgtcaaactggtagtactc 472 |||||| |||||||||||| | |||||| ||| || ||| || |||||||||||||| Sbjct: 1167 ctccttagcctcgcgccatatcgccttgacgatgggtgtgggatcgaactggtagtactc 1108 Query: 473 gccgaggatgggcttgatcgccttggtggcctccatggcgtggtagtgcggcatgttgga 532 ||||||||| || |||||||||||| ||||||| |||||||||||||| ||| | | Sbjct: 1107 gccgaggatagggcggatcgccttggtcgcctccacagcgtggtagtgcgggatggtagg 1048 Query: 533 gaagaggtggtgcgccacgtgcgtgtccgtgatgttgtggaacacgcggttgagaatgcc 592 ||| ||||||||| | ||||| ||||||||||||||||| ||||| ||||| || | || Sbjct: 1047 gaacaggtggtgcacgacgtgtgtgtccgtgatgttgtgaaacactcggttaaggaagct 988 Query: 593 gtagtcccggtccatggtggcgagcgccccccgca 627 |||||| ||||||| ||||||||||||||| |||| Sbjct: 987 gtagtcgcggtccacggtggcgagcgccccgcgca 953
>ref|NM_188193.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1267 Score = 180 bits (91), Expect = 4e-42 Identities = 223/267 (83%) Strand = Plus / Minus Query: 352 gctagaacttgttgctgtaccagaagacccccttgcggtcctcgggctcaacgtagatgc 411 |||| ||||||||| |||||||| ||| || | ||| ||| |||||||||||| |||| Sbjct: 1150 gctaaaacttgttgttgtaccagtagataccatcgcgctccctgggctcaacgtacatgc 1091 Query: 412 actccttggcctcgcgccatgtggccttggcgaccggggtgccgtcaaactggtagtact 471 ||||||||||||| |||||||| |||| | || || |||| |||||||| |||||||| Sbjct: 1090 actccttggcctcacgccatgttgcctcgatgatgggcgtgcggtcaaacttgtagtact 1031 Query: 472 cgccgaggatgggcttgatcgccttggtggcctccatggcgtggtagtgcggcatgttgg 531 | ||||||| |||| | ||| ||||||||||||||||||||||||| |||||| ||| Sbjct: 1030 caccgaggacgggcctcgctgccctggtggcctccatggcgtggtagtgtggcatgctgg 971 Query: 532 agaagaggtggtgcgccacgtgcgtgtccgtgatgttgtggaacacgcggttgagaatgc 591 |||||||||||| |||||||||||||||| |||||| | |||||||||||| | || Sbjct: 970 ggaagaggtggtggaggacgtgcgtgtccgtgacgttgtgcagcacgcggttgaggacgc 911 Query: 592 cgtagtcccggtccatggtggcgagcg 618 ||||||| ||||| | ||||||||||| Sbjct: 910 cgtagtcgcggtcgacggtggcgagcg 884
>dbj|AK105371.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-120-C08, full insert sequence Length = 1267 Score = 180 bits (91), Expect = 4e-42 Identities = 223/267 (83%) Strand = Plus / Minus Query: 352 gctagaacttgttgctgtaccagaagacccccttgcggtcctcgggctcaacgtagatgc 411 |||| ||||||||| |||||||| ||| || | ||| ||| |||||||||||| |||| Sbjct: 1150 gctaaaacttgttgttgtaccagtagataccatcgcgctccctgggctcaacgtacatgc 1091 Query: 412 actccttggcctcgcgccatgtggccttggcgaccggggtgccgtcaaactggtagtact 471 ||||||||||||| |||||||| |||| | || || |||| |||||||| |||||||| Sbjct: 1090 actccttggcctcacgccatgttgcctcgatgatgggcgtgcggtcaaacttgtagtact 1031 Query: 472 cgccgaggatgggcttgatcgccttggtggcctccatggcgtggtagtgcggcatgttgg 531 | ||||||| |||| | ||| ||||||||||||||||||||||||| |||||| ||| Sbjct: 1030 caccgaggacgggcctcgctgccctggtggcctccatggcgtggtagtgtggcatgctgg 971 Query: 532 agaagaggtggtgcgccacgtgcgtgtccgtgatgttgtggaacacgcggttgagaatgc 591 |||||||||||| |||||||||||||||| |||||| | |||||||||||| | || Sbjct: 970 ggaagaggtggtggaggacgtgcgtgtccgtgacgttgtgcagcacgcggttgaggacgc 911 Query: 592 cgtagtcccggtccatggtggcgagcg 618 ||||||| ||||| | ||||||||||| Sbjct: 910 cgtagtcgcggtcgacggtggcgagcg 884
>gb|AY178447.1| Punica granatum delta-12 oleate desaturase mRNA, complete cds Length = 1401 Score = 131 bits (66), Expect = 3e-27 Identities = 138/162 (85%) Strand = Plus / Minus Query: 444 accggggtgccgtcaaactggtagtactcgccgaggatgggcttgatcgccttggtggcc 503 ||||| || ||||| ||||||||||| || || || || ||||||||||| ||||| ||| Sbjct: 1138 accggagtcccgtcgaactggtagtagtctcccagtatcggcttgatcgctttggtagcc 1079 Query: 504 tccatggcgtggtagtgcggcatgttggagaagaggtggtgcgccacgtgcgtgtccgtg 563 ||||| |||||||||||||||||| |||||||||||||||| || || |||||||| || Sbjct: 1078 tccatcgcgtggtagtgcggcatggtggagaagaggtggtgggcgacatgcgtgtcggtt 1019 Query: 564 atgttgtggaacacgcggttgagaatgccgtagtcccggtcc 605 ||||||||||| || |||||| || |||||||| |||||| Sbjct: 1018 atgttgtggaagaccttgttgaggatcccgtagtctcggtcc 977
>emb|AJ437139.1|PGR437139 Punica granatum mRNA for delta 12-acyl-lipid-desaturase (FAD12 gene) Length = 1350 Score = 131 bits (66), Expect = 3e-27 Identities = 138/162 (85%) Strand = Plus / Minus Query: 444 accggggtgccgtcaaactggtagtactcgccgaggatgggcttgatcgccttggtggcc 503 ||||| || ||||| ||||||||||| || || || || ||||||||||| ||||| ||| Sbjct: 1109 accggagtcccgtcgaactggtagtagtctcccagtatcggcttgatcgctttggtagcc 1050 Query: 504 tccatggcgtggtagtgcggcatgttggagaagaggtggtgcgccacgtgcgtgtccgtg 563 ||||| |||||||||||||||||| |||||||||||||||| || || |||||||| || Sbjct: 1049 tccatcgcgtggtagtgcggcatggtggagaagaggtggtgggcgacatgcgtgtcggtt 990 Query: 564 atgttgtggaacacgcggttgagaatgccgtagtcccggtcc 605 ||||||||||| || |||||| || |||||||| |||||| Sbjct: 989 atgttgtggaagaccttgttgaggatcccgtagtctcggtcc 948
>gb|AY489049.1| Capsicum annuum D12 oleate desaturase mRNA, partial sequence Length = 693 Score = 105 bits (53), Expect = 2e-19 Identities = 146/177 (82%) Strand = Plus / Minus Query: 398 ctcaacgtagatgcactccttggcctcgcgccatgtggccttggcgaccggggtgccgtc 457 ||||||||||||||||||||| ||||| | ||| | || ||| | |||||||| || || Sbjct: 591 ctcaacgtagatgcactcctttgcctccctccacattgctttgacaaccggggttccatc 532 Query: 458 aaactggtagtactcgccgaggatgggcttgatcgccttggtggcctccatggcgtggta 517 || |||||||| || ||||| | ||||||| || ||||| || ||||| |||||||| Sbjct: 531 gaattggtagtagtctccgagtaatggcttgactgctttggttgcttccatcgcgtggta 472 Query: 518 gtgcggcatgttggagaagaggtggtgcgccacgtgcgtgtccgtgatgttgtggaa 574 ||| |||||||| ||||| || |||||| ||||||| ||||| |||||||||||||| Sbjct: 471 gtgtggcatgtttgagaacagatggtgcaccacgtgagtgtcggtgatgttgtggaa 415
>gb|DQ222824.1| Linum usitatissimum cultivar Nike delta 12 desaturase (fad2) gene, complete cds Length = 1137 Score = 103 bits (52), Expect = 7e-19 Identities = 103/120 (85%) Strand = Plus / Minus Query: 459 aactggtagtactcgccgaggatgggcttgatcgccttggtggcctccatggcgtggtag 518 |||||||| ||||| ||||| | ||||||||||||||||| |||||||| |||||||| Sbjct: 1022 aactggtaatactccccgagaaccggcttgatcgccttggtagcctccatcgcgtggtaa 963 Query: 519 tgcggcatgttggagaagaggtggtgcgccacgtgcgtgtccgtgatgttgtggaacacg 578 || ||||| |||||||||| |||||||| || || || || |||||||||||||||||| Sbjct: 962 tgaggcatcgtggagaagagatggtgcgcgacatgtgtatcggtgatgttgtggaacacg 903
>gb|AY883446.1| Zea mays cultivar INIFAP-MEX48 teosinte glume architecture 1 (tga1) gene, promoter region Length = 2155 Score = 101 bits (51), Expect = 3e-18 Identities = 78/87 (89%) Strand = Plus / Minus Query: 533 gaagaggtggtgcgccacgtgcgtgtccgtgatgttgtggaacacgcggttgagaatgcc 592 |||||||||||||| ||||||||||||||||||| |||||||||||||||||| | ||| Sbjct: 1343 gaagaggtggtgcgtgacgtgcgtgtccgtgatgtggtggaacacgcggttgaggacgcc 1284 Query: 593 gtagtcccggtccatggtggcgagcgc 619 ||||| ||||| | |||||||||||| Sbjct: 1283 atagtcgcggtcgacggtggcgagcgc 1257
>gb|AY581828.1| Cynodon dactylon putative delta-12 oleate desaturase mRNA, partial cds Length = 451 Score = 99.6 bits (50), Expect = 1e-17 Identities = 68/74 (91%) Strand = Plus / Minus Query: 357 aacttgttgctgtaccagaagacccccttgcggtcctcgggctcaacgtagatgcactcc 416 ||||||||| ||||||| ||||| |||||||||||||| ||||| ||||| ||||||||| Sbjct: 77 aacttgttgttgtaccaaaagacgcccttgcggtcctcaggctcgacgtaaatgcactcc 18 Query: 417 ttggcctcgcgcca 430 |||||||||||||| Sbjct: 17 ttggcctcgcgcca 4
>gb|AF124360.2|AF124360 Brassica carinata delta-12 desaturase (FAD2) mRNA, complete cds Length = 1155 Score = 95.6 bits (48), Expect = 2e-16 Identities = 81/92 (88%) Strand = Plus / Minus Query: 483 ggcttgatcgccttggtggcctccatggcgtggtagtgcggcatgttggagaagaggtgg 542 ||||| |||||||| || |||||||| ||||| || |||||||| ||||||| || || Sbjct: 1016 ggctttatcgccttcgtagcctccatcgcgtgataatgcggcatcgtggagaacagatga 957 Query: 543 tgcgccacgtgcgtgtccgtgatgttgtggaa 574 |||||||||||||||||||||||||||||||| Sbjct: 956 tgcgccacgtgcgtgtccgtgatgttgtggaa 925
>emb|AJ459108.2|BCA459108 Brassica campestris fad2 gene for fatty acid desaturase 2, exons 1-2 Length = 2567 Score = 87.7 bits (44), Expect = 4e-14 Identities = 80/92 (86%) Strand = Plus / Minus Query: 483 ggcttgatcgccttggtggcctccatggcgtggtagtgcggcatgttggagaagaggtgg 542 ||||| |||||||| || || ||||| ||||| || ||||||||| | ||||| ||||| Sbjct: 2266 ggctttatcgccttcgtagcttccatcgcgtgataatgcggcatggtcgagaacaggtga 2207 Query: 543 tgcgccacgtgcgtgtccgtgatgttgtggaa 574 ||||||||||||||||||||||| |||||||| Sbjct: 2206 tgcgccacgtgcgtgtccgtgatattgtggaa 2175
>emb|X91139.1|BJOLDESAT B.juncea mRNA for oleate desaturase Length = 1381 Score = 87.7 bits (44), Expect = 4e-14 Identities = 80/92 (86%) Strand = Plus / Minus Query: 483 ggcttgatcgccttggtggcctccatggcgtggtagtgcggcatgttggagaagaggtgg 542 ||||| || ||||| ||| ||||||| ||||| || |||||||| ||||||| || || Sbjct: 1047 ggctttatggccttcgtgacctccatcgcgtgataatgcggcatcgtggagaacagatga 988 Query: 543 tgcgccacgtgcgtgtccgtgatgttgtggaa 574 |||||||||||||||||||||||||||||||| Sbjct: 987 tgcgccacgtgcgtgtccgtgatgttgtggaa 956
>emb|AJ459107.1|BCA459107 Brassica campestris mRNA for fatty acid desaturase 2 (fad2 gene) Length = 1465 Score = 87.7 bits (44), Expect = 4e-14 Identities = 80/92 (86%) Strand = Plus / Minus Query: 483 ggcttgatcgccttggtggcctccatggcgtggtagtgcggcatgttggagaagaggtgg 542 ||||| |||||||| || || ||||| ||||| || ||||||||| | ||||| ||||| Sbjct: 1164 ggctttatcgccttcgtagcttccatcgcgtgataatgcggcatggtcgagaacaggtga 1105 Query: 543 tgcgccacgtgcgtgtccgtgatgttgtggaa 574 ||||||||||||||||||||||| |||||||| Sbjct: 1104 tgcgccacgtgcgtgtccgtgatattgtggaa 1073
>gb|AF042841.1|AF042841 Brassica rapa delta-12 desaturase (fad2) gene, partial cds Length = 937 Score = 87.7 bits (44), Expect = 4e-14 Identities = 80/92 (86%) Strand = Plus / Minus Query: 483 ggcttgatcgccttggtggcctccatggcgtggtagtgcggcatgttggagaagaggtgg 542 ||||| |||||||| || || ||||| ||||| || ||||||||| | ||||| ||||| Sbjct: 850 ggctttatcgccttcgtagcttccatcgcgtgataatgcggcatggtcgagaacaggtga 791 Query: 543 tgcgccacgtgcgtgtccgtgatgttgtggaa 574 ||||||||||||||||||||||| |||||||| Sbjct: 790 tgcgccacgtgcgtgtccgtgatattgtggaa 759
>gb|AY592975.1| Brassica napus delta-12 oleate desaturase mRNA, complete cds Length = 1172 Score = 85.7 bits (43), Expect = 2e-13 Identities = 145/179 (81%) Strand = Plus / Minus Query: 399 tcaacgtagatgcactccttggcctcgcgccatgtggccttggcgaccggggtgccgtca 458 ||||| ||||| |||||||| ||||| | ||| | ||||| | ||||| || || ||| Sbjct: 1103 tcaacatagatacactccttcgcctccctccacatcgccttaaccaccggcgttccatca 1044 Query: 459 aactggtagtactcgccgaggatgggcttgatcgccttggtggcctccatggcgtggtag 518 |||||||| ||||| || || || ||||| ||||||||||| || ||||| |||| || Sbjct: 1043 aactggtaatactctccaagtatcggctttatcgccttggtcgcttccatcgcgttataa 984 Query: 519 tgcggcatgttggagaagaggtggtgcgccacgtgcgtgtccgtgatgttgtggaacac 577 |||||||| | ||||| || || |||||||||||||||||||||||||| || ||||| Sbjct: 983 tgcggcatcgtcgagaacagatgatgcgccacgtgcgtgtccgtgatgttatgaaacac 925
>gb|AY057406.1| Persea americana delta-12 fatty acid desaturase mRNA, complete cds Length = 1250 Score = 83.8 bits (42), Expect = 6e-13 Identities = 75/86 (87%) Strand = Plus / Minus Query: 492 gccttggtggcctccatggcgtggtagtgcggcatgttggagaagaggtggtgcgccacg 551 |||||||| |||||||| || |||||||| |||||| | |||||||||||||| ||||| Sbjct: 1037 gccttggtcgcctccatagcatggtagtgtggcatggtcgagaagaggtggtgagccaca 978 Query: 552 tgcgtgtccgtgatgttgtggaacac 577 ||||| ||||| |||||||| ||||| Sbjct: 977 tgcgtatccgtaatgttgtgaaacac 952
>gb|AY770501.1| Sesamum indicum microsomal oleic acid desaturase gene, complete cds Length = 3762 Score = 79.8 bits (40), Expect = 1e-11 Identities = 109/132 (82%) Strand = Plus / Minus Query: 446 cggggtgccgtcaaactggtagtactcgccgaggatgggcttgatcgccttggtggcctc 505 |||||| || |||||||| || |||| ||| || ||||||||||| ||||| || ||||| Sbjct: 3456 cggggttccatcaaactgataatactggcccagtatgggcttgattgccttagttgcctc 3397 Query: 506 catggcgtggtagtgcggcatgttggagaagaggtggtgcgccacgtgcgtgtccgtgat 565 ||| || ||||| || ||||| | ||||| |||||||| | ||||||||| || ||||| Sbjct: 3396 cattgcatggtaatgtggcatcgttgagaaaaggtggtgagtcacgtgcgtatctgtgat 3337 Query: 566 gttgtggaacac 577 ||| |||||||| Sbjct: 3336 gttatggaacac 3325
>gb|AY883448.1| Zea mays cultivar INIFAP-PUE32 teosinte glume architecture 1 (tga1) gene, promoter region Length = 2155 Score = 79.8 bits (40), Expect = 1e-11 Identities = 77/88 (87%), Gaps = 1/88 (1%) Strand = Plus / Minus Query: 533 gaagaggtggtgcgccacgtgcgtgtccgtgatgttgtggaacacgcggttga-gaatgc 591 |||||||||||||| |||| |||||||||||||| ||||||||||||||||| | | || Sbjct: 1343 gaagaggtggtgcgtgacgtacgtgtccgtgatgtggtggaacacgcggttgagggacgc 1284 Query: 592 cgtagtcccggtccatggtggcgagcgc 619 | ||||| ||||| | |||||||||||| Sbjct: 1283 catagtcgcggtcgacggtggcgagcgc 1256
>gb|AF192486.1|AF192486 Sesamum indicum omega-6 fatty acid desaturase (FAD2) mRNA, complete cds Length = 1466 Score = 79.8 bits (40), Expect = 1e-11 Identities = 109/132 (82%) Strand = Plus / Minus Query: 446 cggggtgccgtcaaactggtagtactcgccgaggatgggcttgatcgccttggtggcctc 505 |||||| || |||||||| || |||| ||| || ||||||||||| ||||| || ||||| Sbjct: 1141 cggggttccatcaaactgataatactggcccagtatgggcttgattgccttagttgcctc 1082 Query: 506 catggcgtggtagtgcggcatgttggagaagaggtggtgcgccacgtgcgtgtccgtgat 565 ||| || ||||| || ||||| | ||||| |||||||| | ||||||||| || ||||| Sbjct: 1081 cattgcatggtaatgtggcatcgttgagaaaaggtggtgagtcacgtgcgtatctgtgat 1022 Query: 566 gttgtggaacac 577 ||| |||||||| Sbjct: 1021 gttatggaacac 1010
>gb|AY155601.1| Solanum brevidens oleate desaturase-like mRNA, partial sequence Length = 658 Score = 73.8 bits (37), Expect = 6e-10 Identities = 94/113 (83%) Strand = Plus / Minus Query: 462 tggtagtactcgccgaggatgggcttgatcgccttggtggcctccatggcgtggtagtgc 521 |||||||| || ||||| | ||||||| || ||||| |||||||| |||| |||||| Sbjct: 259 tggtagtagtctccgagtagtggcttgactgctttggttgcctccatcgcgttgtagtgt 200 Query: 522 ggcatgttggagaagaggtggtgcgccacgtgcgtgtccgtgatgttgtggaa 574 |||||| | ||||| || |||||| ||||||| ||||| |||||||||||||| Sbjct: 199 ggcatggttgagaacagatggtgcaccacgtgagtgtcggtgatgttgtggaa 147
>emb|X92847.1|SCD12OLDS S.commersonii mRNA for D12 oleate desaturase Length = 1472 Score = 73.8 bits (37), Expect = 6e-10 Identities = 94/113 (83%) Strand = Plus / Minus Query: 462 tggtagtactcgccgaggatgggcttgatcgccttggtggcctccatggcgtggtagtgc 521 |||||||| || ||||| | ||||||| || ||||| |||||||| |||| |||||| Sbjct: 1067 tggtagtagtctccgagtagtggcttgactgctttggttgcctccatcgcgttgtagtgt 1008 Query: 522 ggcatgttggagaagaggtggtgcgccacgtgcgtgtccgtgatgttgtggaa 574 |||||| | ||||| || |||||| ||||||| ||||| |||||||||||||| Sbjct: 1007 ggcatggttgagaacagatggtgcaccacgtgagtgtcggtgatgttgtggaa 955
>gb|AY577313.1| Brassica napus delta-12 oleate desaturase (FAD2) mRNA, complete cds Length = 1155 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 519 tgcggcatgttggagaagaggtggtgcgccacgtgcgtgtccgtgatgttgtggaa 574 ||||||||| | ||||| ||||| ||||||||||||||||||||||| |||||||| Sbjct: 980 tgcggcatggtcgagaacaggtgatgcgccacgtgcgtgtccgtgatattgtggaa 925
>gb|AF243045.1|AF243045 Brassica napus delta-12 oleate desaturase mRNA, complete cds Length = 1155 Score = 71.9 bits (36), Expect = 2e-09 Identities = 78/92 (84%) Strand = Plus / Minus Query: 483 ggcttgatcgccttggtggcctccatggcgtggtagtgcggcatgttggagaagaggtgg 542 ||||| ||||||||||| || ||||| ||||| || |||||||| ||||||| || || Sbjct: 1016 ggctttatcgccttggtagcttccatcgcgtgataatgcggcatcgtggagaacagatga 957 Query: 543 tgcgccacgtgcgtgtccgtgatgttgtggaa 574 ||||||||||||||||| || || |||||||| Sbjct: 956 tgcgccacgtgcgtgtcggtaatattgtggaa 925
>gb|AF251843.1| Helianthus annuus delta-12 oleate desaturase (FAD2-2) mRNA, complete cds Length = 1345 Score = 69.9 bits (35), Expect = 1e-08 Identities = 140/175 (80%) Strand = Plus / Minus Query: 453 ccgtcaaactggtagtactcgccgaggatgggcttgatcgccttggtggcctccatggcg 512 ||||||||||| |||||||| || | ||| ||||||||| |||| ||||| ||||| ||| Sbjct: 1064 ccgtcaaactgatagtactctcccaagatcggcttgatcacctttgtggcttccatcgcg 1005 Query: 513 tggtagtgcggcatgttggagaagaggtggtgcgccacgtgcgtgtccgtgatgttgtgg 572 || || || ||||| | ||||| | ||||| |||||||| || || || ||||| ||| Sbjct: 1004 tgataatgaggcattgtcgagaacaaatggtgtgccacgtgagtatcggtaatgttatgg 945 Query: 573 aacacgcggttgagaatgccgtagtcccggtccatggtggcgagcgccccccgca 627 ||||| ||| |||| |||||||| ||||| |||||||| || ||||| |||| Sbjct: 944 aacaccttgtttagaaccccgtagtctcggtcaatggtggctagggccccacgca 890
>gb|AY802997.1| Helianthus annuus cultivar PHD delta-12 oleate desaturase (FAD2-2) gene, complete cds Length = 1291 Score = 69.9 bits (35), Expect = 1e-08 Identities = 140/175 (80%) Strand = Plus / Minus Query: 453 ccgtcaaactggtagtactcgccgaggatgggcttgatcgccttggtggcctccatggcg 512 ||||||||||| |||||||| || | ||| ||||||||| |||| ||||| ||||| ||| Sbjct: 1060 ccgtcaaactgatagtactctcccaagatcggcttgatcacctttgtggcttccatcgcg 1001 Query: 513 tggtagtgcggcatgttggagaagaggtggtgcgccacgtgcgtgtccgtgatgttgtgg 572 || || || ||||| | ||||| | ||||| |||||||| || || || ||||| ||| Sbjct: 1000 tgataatgaggcattgtcgagaacaaatggtgtgccacgtgagtatcggtaatgttatgg 941 Query: 573 aacacgcggttgagaatgccgtagtcccggtccatggtggcgagcgccccccgca 627 ||||| ||| |||| |||||||| ||||| |||||||| || ||||| |||| Sbjct: 940 aacaccttgtttagaaccccgtagtctcggtcaatggtggctagggccccacgca 886
>gb|AY802996.1| Helianthus annuus cultivar PHC delta-12 oleate desaturase (FAD2-2) gene, complete cds Length = 1291 Score = 69.9 bits (35), Expect = 1e-08 Identities = 140/175 (80%) Strand = Plus / Minus Query: 453 ccgtcaaactggtagtactcgccgaggatgggcttgatcgccttggtggcctccatggcg 512 ||||||||||| |||||||| || | ||| ||||||||| |||| ||||| ||||| ||| Sbjct: 1060 ccgtcaaactgatagtactctcccaagatcggcttgatcacctttgtggcttccatcgcg 1001 Query: 513 tggtagtgcggcatgttggagaagaggtggtgcgccacgtgcgtgtccgtgatgttgtgg 572 || || || ||||| | ||||| | ||||| |||||||| || || || ||||| ||| Sbjct: 1000 tgataatgaggcattgtcgagaacaaatggtgtgccacgtgagtatcggtaatgttatgg 941 Query: 573 aacacgcggttgagaatgccgtagtcccggtccatggtggcgagcgccccccgca 627 ||||| ||| |||| |||||||| ||||| |||||||| || ||||| |||| Sbjct: 940 aacaccttgtttagaaccccgtagtctcggtcaatggtggctagggccccacgca 886
>gb|AY802995.1| Helianthus annuus cultivar HA349 delta-12 oleate desaturase (FAD2-2) gene, complete cds Length = 1291 Score = 69.9 bits (35), Expect = 1e-08 Identities = 140/175 (80%) Strand = Plus / Minus Query: 453 ccgtcaaactggtagtactcgccgaggatgggcttgatcgccttggtggcctccatggcg 512 ||||||||||| |||||||| || | ||| ||||||||| |||| ||||| ||||| ||| Sbjct: 1060 ccgtcaaactgatagtactctcccaagatcggcttgatcacctttgtggcttccatcgcg 1001 Query: 513 tggtagtgcggcatgttggagaagaggtggtgcgccacgtgcgtgtccgtgatgttgtgg 572 || || || ||||| | ||||| | ||||| |||||||| || || || ||||| ||| Sbjct: 1000 tgataatgaggcattgtcgagaacaaatggtgtgccacgtgagtatcggtaatgttatgg 941 Query: 573 aacacgcggttgagaatgccgtagtcccggtccatggtggcgagcgccccccgca 627 ||||| ||| |||| |||||||| ||||| |||||||| || ||||| |||| Sbjct: 940 aacaccttgtttagaaccccgtagtctcggtcaatggtggctagggccccacgca 886
>gb|AY802994.1| Helianthus annuus cultivar HA292 delta-12 oleate desaturase (FAD2-2) gene, complete cds Length = 1291 Score = 69.9 bits (35), Expect = 1e-08 Identities = 140/175 (80%) Strand = Plus / Minus Query: 453 ccgtcaaactggtagtactcgccgaggatgggcttgatcgccttggtggcctccatggcg 512 ||||||||||| |||||||| || | ||| ||||||||| |||| ||||| ||||| ||| Sbjct: 1060 ccgtcaaactgatagtactctcccaagatcggcttgatcacctttgtggcttccatcgcg 1001 Query: 513 tggtagtgcggcatgttggagaagaggtggtgcgccacgtgcgtgtccgtgatgttgtgg 572 || || || ||||| | ||||| | ||||| |||||||| || || || ||||| ||| Sbjct: 1000 tgataatgaggcattgtcgagaacaaatggtgtgccacgtgagtatcggtaatgttatgg 941 Query: 573 aacacgcggttgagaatgccgtagtcccggtccatggtggcgagcgccccccgca 627 ||||| ||| |||| |||||||| ||||| |||||||| || ||||| |||| Sbjct: 940 aacaccttgtttagaaccccgtagtctcggtcaatggtggctagggccccacgca 886
>gb|AY802993.1| Helianthus annuus cultivar HA341 delta-12 oleate desaturase (FAD2-2) gene, complete cds Length = 1291 Score = 69.9 bits (35), Expect = 1e-08 Identities = 140/175 (80%) Strand = Plus / Minus Query: 453 ccgtcaaactggtagtactcgccgaggatgggcttgatcgccttggtggcctccatggcg 512 ||||||||||| |||||||| || | ||| ||||||||| |||| ||||| ||||| ||| Sbjct: 1060 ccgtcaaactgatagtactctcccaagatcggcttgatcacctttgtggcttccatcgcg 1001 Query: 513 tggtagtgcggcatgttggagaagaggtggtgcgccacgtgcgtgtccgtgatgttgtgg 572 || || || ||||| | ||||| | ||||| |||||||| || || || ||||| ||| Sbjct: 1000 tgataatgaggcattgtcgagaacaaatggtgtgccacgtgagtatcggtaatgttatgg 941 Query: 573 aacacgcggttgagaatgccgtagtcccggtccatggtggcgagcgccccccgca 627 ||||| ||| |||| |||||||| ||||| |||||||| || ||||| |||| Sbjct: 940 aacaccttgtttagaaccccgtagtctcggtcaatggtggctagggccccacgca 886
>dbj|AB075526.1| Chlorella vulgaris CvFad2 mRNA for delta12 fatty acid desaturase, complete cds Length = 1427 Score = 69.9 bits (35), Expect = 1e-08 Identities = 47/51 (92%) Strand = Plus / Minus Query: 509 ggcgtggtagtgcggcatgttggagaagaggtggtgcgccacgtgcgtgtc 559 |||||||||||||||||| | ||||||||||||||| ||||| |||||||| Sbjct: 1054 ggcgtggtagtgcggcatctgggagaagaggtggtgtgccacatgcgtgtc 1004
>emb|AJ292275.1|HAN292275 Helianthus annuus partial fad2 gene for oleate desaturase, exon 1 Length = 1344 Score = 69.9 bits (35), Expect = 1e-08 Identities = 140/175 (80%) Strand = Plus / Minus Query: 453 ccgtcaaactggtagtactcgccgaggatgggcttgatcgccttggtggcctccatggcg 512 ||||||||||| |||||||| || | ||| ||||||||| |||| ||||| ||||| ||| Sbjct: 1064 ccgtcaaactgatagtactctcccaagatcggcttgatcacctttgtggcttccatcgcg 1005 Query: 513 tggtagtgcggcatgttggagaagaggtggtgcgccacgtgcgtgtccgtgatgttgtgg 572 || || || ||||| | ||||| | ||||| |||||||| || || || ||||| ||| Sbjct: 1004 tgataatgaggcattgtcgagaacaaatggtgtgccacgtgagtatcggtaatgttatgg 945 Query: 573 aacacgcggttgagaatgccgtagtcccggtccatggtggcgagcgccccccgca 627 ||||| ||| |||| |||||||| ||||| |||||||| || ||||| |||| Sbjct: 944 aacaccttgtttagaaccccgtagtctcggtcaatggtggctagggccccacgca 890
>gb|AY733076.1| Olea europaea microsomal delta-12 oleate desaturase (FAD2-1) mRNA, complete cds; nuclear gene for microsomal product Length = 1430 Score = 63.9 bits (32), Expect = 6e-07 Identities = 80/96 (83%) Strand = Plus / Minus Query: 483 ggcttgatcgccttggtggcctccatggcgtggtagtgcggcatgttggagaagaggtgg 542 |||||||| || || || |||||||| || || ||||| ||||| | ||||||||||| Sbjct: 1097 ggcttgattgctttagtcgcctccattgcatgatagtgtggcattgttgagaagaggtga 1038 Query: 543 tgcgccacgtgcgtgtccgtgatgttgtggaacacg 578 || ||||||||||| || || ||||||||||||||| Sbjct: 1037 tgagccacgtgcgtatcagtaatgttgtggaacacg 1002
>gb|AY373822.1| Saprolegnia diclina delta-12 desaturase (sdd12) gene, complete cds Length = 1182 Score = 58.0 bits (29), Expect = 4e-05 Identities = 80/97 (82%) Strand = Plus / Minus Query: 463 ggtagtactcgccgaggatgggcttgatcgccttggtggcctccatggcgtggtagtgcg 522 ||||||||| |||||||| |||| |||| || | ||| ||||| || ||||||||| | Sbjct: 1069 ggtagtacttgccgaggaggggcgtgatggcgtcggtcgcctcgatcgcgtggtagaagg 1010 Query: 523 gcatgttggagaagaggtggtgcgccacgtgcgtgtc 559 || | |||||||| | |||||||| |||||||||||| Sbjct: 1009 gcgtcttggagaaaatgtggtgcgtcacgtgcgtgtc 973
>gb|AY660024.2| Nicotiana tabacum microsomal omega-6-desaturase (FAD2) mRNA, complete cds; nuclear gene for microsomal product Length = 1492 Score = 56.0 bits (28), Expect = 1e-04 Identities = 103/128 (80%) Strand = Plus / Minus Query: 447 ggggtgccgtcaaactggtagtactcgccgaggatgggcttgatcgccttggtggcctcc 506 ||||| || ||||| |||||||| || ||||| | ||||||| ||||| || |||||| Sbjct: 1107 ggggttccatcaaattggtagtagtctccgagtaatggcttgactgccttcgttgcctcc 1048 Query: 507 atggcgtggtagtgcggcatgttggagaagaggtggtgcgccacgtgcgtgtccgtgatg 566 || |||| |||||| ||||| | ||||| || |||||| | ||||| || || |||||| Sbjct: 1047 atcgcgttgtagtgtggcattgtcgagaacagatggtgcacgacgtgagtatcggtgatg 988 Query: 567 ttgtggaa 574 |||||||| Sbjct: 987 ttgtggaa 980
>gb|AF071892.1|AF071892 Prunus armeniaca omega-6 fatty acid desaturase (O6FAD) mRNA, partial cds Length = 1219 Score = 56.0 bits (28), Expect = 1e-04 Identities = 76/92 (82%) Strand = Plus / Minus Query: 483 ggcttgatcgccttggtggcctccatggcgtggtagtgcggcatgttggagaagaggtgg 542 |||||||| || |||||||||||||| || ||||| || |||||| | ||||| | ||| Sbjct: 905 ggcttgatagctttggtggcctccattgcatggtaatgtggcatggttgagaacaaatgg 846 Query: 543 tgcgccacgtgcgtgtccgtgatgttgtggaa 574 || || || || ||||| |||||||||||||| Sbjct: 845 tgagcaacatgagtgtctgtgatgttgtggaa 814
>ref|NM_112047.2| Arabidopsis thaliana FAD2 (FATTY ACID DESATURASE 2); delta12-fatty acid dehydrogenase AT3G12120 (FAD2) mRNA, complete cds Length = 1615 Score = 54.0 bits (27), Expect = 6e-04 Identities = 78/95 (82%) Strand = Plus / Minus Query: 483 ggcttgatcgccttggtggcctccatggcgtggtagtgcggcatgttggagaagaggtgg 542 ||||| |||||||| || || ||||| |||| || |||||||| | ||||| ||||| Sbjct: 1169 ggctttatcgcctttgtagcttccattgcgttataatgcggcattgtcgagaacaggtga 1110 Query: 543 tgcgccacgtgcgtgtccgtgatgttgtggaacac 577 || |||||||| ||||| || |||||||||||||| Sbjct: 1109 tgagccacgtgtgtgtctgtaatgttgtggaacac 1075
>gb|AY142057.1| Arabidopsis thaliana At3g12120/T21B14_107 mRNA, complete cds Length = 1152 Score = 54.0 bits (27), Expect = 6e-04 Identities = 78/95 (82%) Strand = Plus / Minus Query: 483 ggcttgatcgccttggtggcctccatggcgtggtagtgcggcatgttggagaagaggtgg 542 ||||| |||||||| || || ||||| |||| || |||||||| | ||||| ||||| Sbjct: 1013 ggctttatcgcctttgtagcttccattgcgttataatgcggcattgtcgagaacaggtga 954 Query: 543 tgcgccacgtgcgtgtccgtgatgttgtggaacac 577 || |||||||| ||||| || |||||||||||||| Sbjct: 953 tgagccacgtgtgtgtctgtaatgttgtggaacac 919
>gb|AF181726.1| Brassica oleracea cultivar Rapid Cycling delta-12 fatty acid desaturase (FAD2) gene, partial cds Length = 619 Score = 54.0 bits (27), Expect = 6e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 504 tccatggcgtggtagtgcggcatgttggagaagaggtggtgcgccacgtgcgtgtccgtg 563 ||||| ||||| || |||||||| ||||||| || || ||||||||||||||||| || Sbjct: 616 tccatcgcgtgataatgcggcatcgtggagaacagatgatgcgccacgtgcgtgtcggta 557 Query: 564 atgttgtggaa 574 || |||||||| Sbjct: 556 atattgtggaa 546
>gb|AY039572.1| Arabidopsis thaliana AT3g12120/T21B14_107 mRNA, complete cds Length = 1451 Score = 54.0 bits (27), Expect = 6e-04 Identities = 78/95 (82%) Strand = Plus / Minus Query: 483 ggcttgatcgccttggtggcctccatggcgtggtagtgcggcatgttggagaagaggtgg 542 ||||| |||||||| || || ||||| |||| || |||||||| | ||||| ||||| Sbjct: 1165 ggctttatcgcctttgtagcttccattgcgttataatgcggcattgtcgagaacaggtga 1106 Query: 543 tgcgccacgtgcgtgtccgtgatgttgtggaacac 577 || |||||||| ||||| || |||||||||||||| Sbjct: 1105 tgagccacgtgtgtgtctgtaatgttgtggaacac 1071
>gb|AC069473.4|AC069473 Arabidopsis thaliana chromosome 3 BAC T21B14 genomic sequence, complete sequence Length = 85657 Score = 54.0 bits (27), Expect = 6e-04 Identities = 78/95 (82%) Strand = Plus / Minus Query: 483 ggcttgatcgccttggtggcctccatggcgtggtagtgcggcatgttggagaagaggtgg 542 ||||| |||||||| || || ||||| |||| || |||||||| | ||||| ||||| Sbjct: 21401 ggctttatcgcctttgtagcttccattgcgttataatgcggcattgtcgagaacaggtga 21342 Query: 543 tgcgccacgtgcgtgtccgtgatgttgtggaacac 577 || |||||||| ||||| || |||||||||||||| Sbjct: 21341 tgagccacgtgtgtgtctgtaatgttgtggaacac 21307
>gb|AY084545.1| Arabidopsis thaliana clone 111219 mRNA, complete sequence Length = 1451 Score = 54.0 bits (27), Expect = 6e-04 Identities = 78/95 (82%) Strand = Plus / Minus Query: 483 ggcttgatcgccttggtggcctccatggcgtggtagtgcggcatgttggagaagaggtgg 542 ||||| |||||||| || || ||||| |||| || |||||||| | ||||| ||||| Sbjct: 1165 ggctttatcgcctttgtagcttccattgcgttataatgcggcattgtcgagaacaggtga 1106 Query: 543 tgcgccacgtgcgtgtccgtgatgttgtggaacac 577 || |||||||| ||||| || |||||||||||||| Sbjct: 1105 tgagccacgtgtgtgtctgtaatgttgtggaacac 1071
>dbj|AB094415.1| Spinacia oleracea FAD2 mRNA for delta-12 desaturase, complete cds Length = 1627 Score = 54.0 bits (27), Expect = 6e-04 Identities = 78/95 (82%) Strand = Plus / Minus Query: 483 ggcttgatcgccttggtggcctccatggcgtggtagtgcggcatgttggagaagaggtgg 542 ||||| || |||||||| |||||||| || || || || |||||| | |||| ||| ||| Sbjct: 1173 ggctttatagccttggttgcctccatagcatgataatggggcatggtcgagatgagatgg 1114 Query: 543 tgcgccacgtgcgtgtccgtgatgttgtggaacac 577 || |||||||| || || || |||||||||||||| Sbjct: 1113 tgagccacgtgagtatcagtaatgttgtggaacac 1079
>dbj|AP002063.2| Arabidopsis thaliana genomic DNA, chromosome 3, BAC clone: T23B7 Length = 40167 Score = 54.0 bits (27), Expect = 6e-04 Identities = 78/95 (82%) Strand = Plus / Plus Query: 483 ggcttgatcgccttggtggcctccatggcgtggtagtgcggcatgttggagaagaggtgg 542 ||||| |||||||| || || ||||| |||| || |||||||| | ||||| ||||| Sbjct: 14568 ggctttatcgcctttgtagcttccattgcgttataatgcggcattgtcgagaacaggtga 14627 Query: 543 tgcgccacgtgcgtgtccgtgatgttgtggaacac 577 || |||||||| ||||| || |||||||||||||| Sbjct: 14628 tgagccacgtgtgtgtctgtaatgttgtggaacac 14662
>emb|Y10112.2|GHOMEGA6 Gossypium hirsutum mRNA for omega-6 desaturase Length = 1422 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 480 atgggcttgatcgccttggtggcctccatggcgtggtagtgcggcat 526 |||||||| ||||||||||||||| ||||||| || ||||| ||||| Sbjct: 1113 atgggctttatcgccttggtggccaccatggcatgatagtgaggcat 1067
>gb|AY954300.1| Glycine max microsomal omega-6-desaturase (FAD2-1) gene, complete cds; nuclear gene for microsomal product Length = 1852 Score = 54.0 bits (27), Expect = 6e-04 Identities = 78/95 (82%) Strand = Plus / Minus Query: 456 tcaaactggtagtactcgccgaggatgggcttgatcgccttggtggcctccatggcgtgg 515 ||||| ||||||||||| || | || |||||||| || ||||| |||||||| || ||| Sbjct: 1534 tcaaattggtagtactcacccaatattggcttgattgcattggttgcctccattgcatgg 1475 Query: 516 tagtgcggcatgttggagaagaggtggtgcgccac 550 ||||| ||||| | |||||||| ||||| ||||| Sbjct: 1474 tagtgtggcattgtagagaagagatggtgagccac 1440
>gb|L26296.1|ATHD12AAA Arabidopsis thaliana delta-12 desaturase (Fad2) mRNA, complete cds Length = 1372 Score = 54.0 bits (27), Expect = 6e-04 Identities = 78/95 (82%) Strand = Plus / Minus Query: 483 ggcttgatcgccttggtggcctccatggcgtggtagtgcggcatgttggagaagaggtgg 542 ||||| |||||||| || || ||||| |||| || |||||||| | ||||| ||||| Sbjct: 1105 ggctttatcgcctttgtagcttccattgcgttataatgcggcattgtcgagaacaggtga 1046 Query: 543 tgcgccacgtgcgtgtccgtgatgttgtggaacac 577 || |||||||| ||||| || |||||||||||||| Sbjct: 1045 tgagccacgtgtgtgtctgtaatgttgtggaacac 1011
>gb|AY178444.1| Trichosanthes kirilowii fatty acid conjugase mRNA, complete cds Length = 1287 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 498 gtggcctccatggcgtggtagtgcggcat 526 |||||||||||||||| |||||||||||| Sbjct: 1025 gtggcctccatggcgttgtagtgcggcat 997
>gb|AC108856.20| Mus musculus chromosome 8, clone RP24-355A11, complete sequence Length = 203330 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 305 ctcttctctgagttcttcctggaacac 331 ||||||||||||||||||||| ||||| Sbjct: 23724 ctcttctctgagttcttcctgtaacac 23750
>dbj|AP001731.1| Homo sapiens genomic DNA, chromosome 21q, section 75/105 Length = 340000 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 270 atatgtaggtagatggatggatt 292 ||||||||||||||||||||||| Sbjct: 110046 atatgtaggtagatggatggatt 110068
>gb|L43920.1|SOYMO6D Glycine max FAD2-1 microsomal omega-6 desaturase mRNA, complete cds Length = 1453 Score = 46.1 bits (23), Expect = 0.14 Identities = 77/95 (81%) Strand = Plus / Minus Query: 456 tcaaactggtagtactcgccgaggatgggcttgatcgccttggtggcctccatggcgtgg 515 ||||| ||||||||||| || | || |||||||| || ||||| |||||||| || ||| Sbjct: 1135 tcaaattggtagtactcacccaatattggcttgattgcattggttgcctccattgcatgg 1076 Query: 516 tagtgcggcatgttggagaagaggtggtgcgccac 550 || || ||||| | |||||||| ||||| ||||| Sbjct: 1075 taatgtggcattgtagagaagagatggtgagccac 1041
>dbj|AP000161.1| Homo sapiens genomic DNA, chromosome 21q22.2, DSCR region, clone D47-S479, segment 13/16, complete sequence Length = 100000 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 270 atatgtaggtagatggatggatt 292 ||||||||||||||||||||||| Sbjct: 96463 atatgtaggtagatggatggatt 96485
>dbj|AP000020.2| Homo sapiens genomic DNA of 21q22.2 Down Syndrome region, segment 11/13 Length = 100000 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 270 atatgtaggtagatggatggatt 292 ||||||||||||||||||||||| Sbjct: 30859 atatgtaggtagatggatggatt 30881
>dbj|AP001434.1| Homo sapiens genomic DNA, chromosome 21q22.2, clone:T2079, LB7T-ERG region, complete sequence Length = 74817 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 270 atatgtaggtagatggatggatt 292 ||||||||||||||||||||||| Sbjct: 31514 atatgtaggtagatggatggatt 31536
>gb|AY780572.1| Tropaeolum majus delta-12 fatty acid desaturase mRNA, complete cds Length = 1622 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Minus Query: 498 gtggcctccatggcgtggtagtgcggcatg 527 ||||||||||| |||||||| ||||||||| Sbjct: 1105 gtggcctccatcgcgtggtaatgcggcatg 1076
>gb|AC103758.14| Homo sapiens chromosome 8, clone CTD-3135A9, complete sequence Length = 235357 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 270 atatgtaggtagatggatggat 291 |||||||||||||||||||||| Sbjct: 53897 atatgtaggtagatggatggat 53918 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 270 atatgtaggtagatggatggat 291 |||||||||||||||||||||| Sbjct: 53757 atatgtaggtagatggatggat 53778
>emb|X97016.1|GHO6DESAT G.hirsutum mRNA for omega-6 desaturase Length = 1386 Score = 44.1 bits (22), Expect = 0.55 Identities = 88/110 (80%) Strand = Plus / Minus Query: 468 tactcgccgaggatgggcttgatcgccttggtggcctccatggcgtggtagtgcggcatg 527 |||| |||||| || || ||||| || || ||||||||||| || || || || ||||| Sbjct: 1078 tacttgccgagtattggtttgattgctttagtggcctccattgcatgataatgtggcatc 1019 Query: 528 ttggagaagaggtggtgcgccacgtgcgtgtccgtgatgttgtggaacac 577 | ||||||||||| || || || ||||| || |||||||| |||||||| Sbjct: 1018 gttgagaagaggtgatgagcaacatgcgtatcggtgatgttatggaacac 969
>gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete genome Length = 1709204 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 300 aggacctcttctctgagttcttcct 324 |||||||||||| |||||||||||| Sbjct: 19422 aggacctcttctttgagttcttcct 19398
>emb|BX571857.1| Staphylococcus aureus strain MSSA476, complete genome Length = 2799802 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 6 atggtctacaacaacatgaca 26 ||||||||||||||||||||| Sbjct: 2203606 atggtctacaacaacatgaca 2203586
>dbj|BA000017.4| Staphylococcus aureus subsp. aureus Mu50 DNA, complete genome Length = 2878529 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 6 atggtctacaacaacatgaca 26 ||||||||||||||||||||| Sbjct: 2274285 atggtctacaacaacatgaca 2274265
>gb|AC078830.7| Staphylococcus aureus clone sabac-115, complete sequence Length = 44051 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 6 atggtctacaacaacatgaca 26 ||||||||||||||||||||| Sbjct: 12218 atggtctacaacaacatgaca 12198
>gb|CP000046.1| Staphylococcus aureus subsp. aureus COL, complete genome Length = 2809422 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 6 atggtctacaacaacatgaca 26 ||||||||||||||||||||| Sbjct: 2199395 atggtctacaacaacatgaca 2199375
>gb|CP000253.1| Staphylococcus aureus subsp. aureus NCTC 8325, complete genome Length = 2821361 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 6 atggtctacaacaacatgaca 26 ||||||||||||||||||||| Sbjct: 2210120 atggtctacaacaacatgaca 2210100
>gb|CP000255.1| Staphylococcus aureus subsp. aureus USA300, complete genome Length = 2872769 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 6 atggtctacaacaacatgaca 26 ||||||||||||||||||||| Sbjct: 2263197 atggtctacaacaacatgaca 2263177
>gb|AC025592.10| Staphylococcus aureus clone sabac-43, complete sequence Length = 55389 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 6 atggtctacaacaacatgaca 26 ||||||||||||||||||||| Sbjct: 23457 atggtctacaacaacatgaca 23437
>gb|AC078934.3| Staphylococcus aureus clone sabac-11, complete sequence Length = 55390 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 6 atggtctacaacaacatgaca 26 ||||||||||||||||||||| Sbjct: 23457 atggtctacaacaacatgaca 23437
>dbj|BA000033.2| Staphylococcus aureus subsp. aureus MW2 DNA, complete genome, strain:MW2 Length = 2820462 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 6 atggtctacaacaacatgaca 26 ||||||||||||||||||||| Sbjct: 2224501 atggtctacaacaacatgaca 2224481
>dbj|BA000018.3| Staphylococcus aureus subsp. aureus N315 genomic DNA, complete genome Length = 2814816 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 6 atggtctacaacaacatgaca 26 ||||||||||||||||||||| Sbjct: 2197853 atggtctacaacaacatgaca 2197833
>emb|BX649423.7| Zebrafish DNA sequence from clone DKEY-18O7 in linkage group 4, complete sequence Length = 182374 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 271 tatgtaggtagatggatggat 291 ||||||||||||||||||||| Sbjct: 28594 tatgtaggtagatggatggat 28574
>gb|U67965.1|SAU67965 Staphylococcus aureus lytic regulatory protein gene, complete cds Length = 6779 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 6 atggtctacaacaacatgaca 26 ||||||||||||||||||||| Sbjct: 278 atggtctacaacaacatgaca 258
>emb|BX571856.1| Staphylococcus aureus subsp. aureus strain MRSA252, complete genome Length = 2902619 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 6 atggtctacaacaacatgaca 26 ||||||||||||||||||||| Sbjct: 2302203 atggtctacaacaacatgaca 2302183
>gb|AF044951.1|AF044951 Staphylococcus aureus repressor protein (rzcA) and transport protein (rzcB) genes, complete cds Length = 2016 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 6 atggtctacaacaacatgaca 26 ||||||||||||||||||||| Sbjct: 1306 atggtctacaacaacatgaca 1286
>emb|AJ938182.1| Staphylococcus aureus RF122 complete genome Length = 2742531 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 6 atggtctacaacaacatgaca 26 ||||||||||||||||||||| Sbjct: 2162006 atggtctacaacaacatgaca 2161986
>dbj|AB016431.1| Staphylococcus aureus, zinc responsible operon czr genes, complete and partial cds Length = 3754 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 6 atggtctacaacaacatgaca 26 ||||||||||||||||||||| Sbjct: 913 atggtctacaacaacatgaca 933
>gb|AC110252.25| Mus musculus chromosome 6, clone RP23-267G12, complete sequence Length = 172806 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 atgtaggtagatggatggat 291 |||||||||||||||||||| Sbjct: 26493 atgtaggtagatggatggat 26512
>ref|XM_513735.1| PREDICTED: Pan troglodytes similar to Rho guanine exchange factor 16; putative neuroblastoma protein (LOC457228), mRNA Length = 2124 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 525 atgttggagaagaggtggtg 544 |||||||||||||||||||| Sbjct: 1295 atgttggagaagaggtggtg 1276
>ref|XM_513260.1| PREDICTED: Pan troglodytes LOC456689 (LOC456689), mRNA Length = 3078 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 tcttctctgagttcttcctg 325 |||||||||||||||||||| Sbjct: 575 tcttctctgagttcttcctg 556
>gb|BC081539.1| Homo sapiens cDNA clone IMAGE:6142233 Length = 6031 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 tcttctctgagttcttcctg 325 |||||||||||||||||||| Sbjct: 5245 tcttctctgagttcttcctg 5264
>gb|BC061434.1| Xenopus tropicalis hypothetical protein MGC76044, mRNA (cDNA clone MGC:76044 IMAGE:5385045), complete cds Length = 1467 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 592 cgtagtcccggtccatggtggcga 615 ||||||||||| |||||||||||| Sbjct: 89 cgtagtcccgggccatggtggcga 66
>gb|AC099029.2| Drosophila melanogaster clone BACR09J12, complete sequence Length = 189618 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 551 gtgcgtgtccgtgatgttgtggaa 574 |||||||| ||||||||||||||| Sbjct: 35079 gtgcgtgtacgtgatgttgtggaa 35102
>ref|XM_417549.1| PREDICTED: Gallus gallus similar to Arhgef16 protein (LOC419386), mRNA Length = 1266 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 525 atgttggagaagaggtggtg 544 |||||||||||||||||||| Sbjct: 167 atgttggagaagaggtggtg 148
>gb|AC106830.11| Mus musculus chromosome 15, clone RP24-402C20, complete sequence Length = 171577 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 tagatggatggattacttgt 298 |||||||||||||||||||| Sbjct: 55739 tagatggatggattacttgt 55758
>ref|NM_014448.2| Homo sapiens Rho guanine exchange factor (GEF) 16 (ARHGEF16), mRNA Length = 2205 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 525 atgttggagaagaggtggtg 544 |||||||||||||||||||| Sbjct: 522 atgttggagaagaggtggtg 503
>gb|BC068969.1| Xenopus laevis similar to RAB35, member RAS oncogene family, mRNA (cDNA clone IMAGE:6637464), partial cds Length = 1351 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 592 cgtagtcccggtccatggtggcga 615 ||||||||||| |||||||||||| Sbjct: 107 cgtagtcccgggccatggtggcga 84
>gb|BC020030.1| Mus musculus Rho guanine nucleotide exchange factor (GEF) 16, mRNA (cDNA clone IMAGE:3667874), partial cds Length = 1831 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 525 atgttggagaagaggtggtg 544 |||||||||||||||||||| Sbjct: 257 atgttggagaagaggtggtg 238
>gb|BC041759.1| Xenopus laevis similar to RAB35, member RAS oncogene family, mRNA (cDNA clone IMAGE:4884628), partial cds Length = 1456 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 592 cgtagtcccggtccatggtggcga 615 ||||||||||| |||||||||||| Sbjct: 96 cgtagtcccgggccatggtggcga 73
>ref|XM_989466.1| PREDICTED: Mus musculus Rho guanine nucleotide exchange factor (GEF) 16 (Arhgef16), mRNA Length = 3069 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 525 atgttggagaagaggtggtg 544 |||||||||||||||||||| Sbjct: 1433 atgttggagaagaggtggtg 1414
>ref|XM_149562.8| PREDICTED: Mus musculus Rho guanine nucleotide exchange factor (GEF) 16, transcript variant 1 (Arhgef16), mRNA Length = 2068 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 525 atgttggagaagaggtggtg 544 |||||||||||||||||||| Sbjct: 458 atgttggagaagaggtggtg 439
>ref|XM_902459.2| PREDICTED: Mus musculus Rho guanine nucleotide exchange factor (GEF) 16, transcript variant 5 (Arhgef16), mRNA Length = 3054 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 525 atgttggagaagaggtggtg 544 |||||||||||||||||||| Sbjct: 1433 atgttggagaagaggtggtg 1414
>gb|AC129318.4| Mus musculus BAC clone RP23-464B17 from chromosome 6, complete sequence Length = 162905 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 gaaagtaaagaaggaactga 156 |||||||||||||||||||| Sbjct: 139439 gaaagtaaagaaggaactga 139420
>gb|AC127376.3| Mus musculus BAC clone RP23-49A4 from chromosome 6, complete sequence Length = 204528 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 272 atgtaggtagatggatggat 291 |||||||||||||||||||| Sbjct: 33193 atgtaggtagatggatggat 33174
>gb|BC044805.1| Mus musculus Rho guanine nucleotide exchange factor (GEF) 16, mRNA (cDNA clone IMAGE:4950667), with apparent retained intron Length = 4139 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 525 atgttggagaagaggtggtg 544 |||||||||||||||||||| Sbjct: 2075 atgttggagaagaggtggtg 2056
>gb|AC125112.3| Mus musculus BAC clone RP24-239I23 from chromosome 2, complete sequence Length = 149339 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 gtaggtagatggatggatta 293 |||||||||||||||||||| Sbjct: 76911 gtaggtagatggatggatta 76930
>ref|XM_844464.1| PREDICTED: Canis familiaris similar to Rho guanine exchange factor 16 (LOC607691), mRNA Length = 3195 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 525 atgttggagaagaggtggtg 544 |||||||||||||||||||| Sbjct: 2060 atgttggagaagaggtggtg 2041
>gb|BC051838.1| Homo sapiens Rho guanine exchange factor (GEF) 16, mRNA (cDNA clone MGC:60142 IMAGE:6191377), complete cds Length = 2226 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 525 atgttggagaagaggtggtg 544 |||||||||||||||||||| Sbjct: 550 atgttggagaagaggtggtg 531
>gb|BC039079.1| Homo sapiens erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked), mRNA (cDNA clone MGC:34494 IMAGE:5167140), complete cds Length = 2486 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 tcttctctgagttcttcctg 325 |||||||||||||||||||| Sbjct: 691 tcttctctgagttcttcctg 672
>ref|NM_203688.1| Xenopus tropicalis hypothetical protein MGC76044 (MGC76044), mRNA Length = 1467 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 592 cgtagtcccggtccatggtggcga 615 ||||||||||| |||||||||||| Sbjct: 89 cgtagtcccgggccatggtggcga 66
>gb|BC114450.1| Homo sapiens erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked), mRNA (cDNA clone IMAGE:40001732), partial cds Length = 2812 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 tcttctctgagttcttcctg 325 |||||||||||||||||||| Sbjct: 228 tcttctctgagttcttcctg 209
>gb|BC113841.1| Homo sapiens erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked), mRNA (cDNA clone IMAGE:40001733), partial cds Length = 2620 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 tcttctctgagttcttcctg 325 |||||||||||||||||||| Sbjct: 228 tcttctctgagttcttcctg 209
>emb|AL512413.23| Human DNA sequence from clone RP11-168F9 on chromosome 1 Contains the ARHGEF16 gene for Rho guanine exchange factor (GEF) 16 and the 3' end of the EGFL3 gene for EGF-like-domain multiple 3, complete sequence Length = 57481 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 525 atgttggagaagaggtggtg 544 |||||||||||||||||||| Sbjct: 22898 atgttggagaagaggtggtg 22879
>emb|AL138785.8| Human DNA sequence from clone RP4-604A21 on chromosome 1 Contains part of the EPB41 gene for erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked) and a ribosomal protein L27 (RPL27) pseudogene, complete sequence Length = 109609 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 tcttctctgagttcttcctg 325 |||||||||||||||||||| Sbjct: 36764 tcttctctgagttcttcctg 36745
>gb|BT008072.1| Synthetic construct Homo sapiens Rho guanine exchange factor (GEF) 16 mRNA, partial cds Length = 1266 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 525 atgttggagaagaggtggtg 544 |||||||||||||||||||| Sbjct: 131 atgttggagaagaggtggtg 112
>gb|BT007270.1| Homo sapiens Rho guanine exchange factor (GEF) 16 mRNA, complete cds Length = 1266 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 525 atgttggagaagaggtggtg 544 |||||||||||||||||||| Sbjct: 131 atgttggagaagaggtggtg 112
>gb|AF533361.1| Mucor rouxii delta-12 desaturase gene, complete cds Length = 1364 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 510 gcgtggtagtgcggcatgttggagaaga 537 ||||||||||| |||||| ||||||||| Sbjct: 1219 gcgtggtagtgaggcatggtggagaaga 1192
>gb|BC099268.1| Xenopus laevis similar to RAB35, member RAS oncogene family, mRNA (cDNA clone IMAGE:6931228), partial cds Length = 1370 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 592 cgtagtcccggtccatggtggcga 615 ||||||||||| |||||||||||| Sbjct: 112 cgtagtcccgggccatggtggcga 89
>emb|CR759889.5| Zebrafish DNA sequence from clone DKEY-172F14 in linkage group 5, complete sequence Length = 129171 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 atgtaggtagatggatggat 291 |||||||||||||||||||| Sbjct: 94466 atgtaggtagatggatggat 94485
>dbj|AK095984.1| Homo sapiens cDNA FLJ38665 fis, clone HLUNG2003378, weakly similar to Rho guanine nucleotide exchange factor 5 Length = 2811 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 525 atgttggagaagaggtggtg 544 |||||||||||||||||||| Sbjct: 1150 atgttggagaagaggtggtg 1131
>emb|CR609468.1| full-length cDNA clone CS0DK004YO05 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 2858 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 525 atgttggagaagaggtggtg 544 |||||||||||||||||||| Sbjct: 1233 atgttggagaagaggtggtg 1214
>dbj|AK153708.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A630055L23 product:Rho guanine nucleotide exchange factor (GEF) 16, full insert sequence Length = 2878 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 525 atgttggagaagaggtggtg 544 |||||||||||||||||||| Sbjct: 1257 atgttggagaagaggtggtg 1238
>gb|AC007417.5| Drosophila melanogaster, chromosome 2R, region 47A-47B, BAC clone BACR48F07, complete sequence Length = 175681 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 551 gtgcgtgtccgtgatgttgtggaa 574 |||||||| ||||||||||||||| Sbjct: 13464 gtgcgtgtacgtgatgttgtggaa 13441
>gb|BC095966.1| Mus musculus Rho guanine nucleotide exchange factor (GEF) 16, mRNA (cDNA clone IMAGE:6485226), partial cds Length = 2059 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 525 atgttggagaagaggtggtg 544 |||||||||||||||||||| Sbjct: 393 atgttggagaagaggtggtg 374
>dbj|AK042195.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A630068L09 product:Rho guanine nucleotide exchange factor (GEF) 16, full insert sequence Length = 2650 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 525 atgttggagaagaggtggtg 544 |||||||||||||||||||| Sbjct: 1092 atgttggagaagaggtggtg 1073
>gb|BC096105.1| Homo sapiens cDNA clone IMAGE:40001729, partial cds Length = 2815 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 tcttctctgagttcttcctg 325 |||||||||||||||||||| Sbjct: 228 tcttctctgagttcttcctg 209
>gb|AC155817.2| Mus musculus BAC clone RP23-473M8 from chromosome 12, complete sequence Length = 159497 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 ggaggaaagtaaagaaggaa 152 |||||||||||||||||||| Sbjct: 25974 ggaggaaagtaaagaaggaa 25993
>gb|AC154405.2| Mus musculus BAC clone RP24-248O10 from chromosome 12, complete sequence Length = 158411 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 ggaggaaagtaaagaaggaa 152 |||||||||||||||||||| Sbjct: 123459 ggaggaaagtaaagaaggaa 123478
>emb|BX932670.1| Gallus gallus finished cDNA, clone ChEST495b14 Length = 646 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 525 atgttggagaagaggtggtg 544 |||||||||||||||||||| Sbjct: 326 atgttggagaagaggtggtg 307
>gb|AY892101.1| Synthetic construct Homo sapiens clone FLH026709.01L Rho guanine exchange factor (GEF) mRNA, partial cds Length = 1266 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 525 atgttggagaagaggtggtg 544 |||||||||||||||||||| Sbjct: 131 atgttggagaagaggtggtg 112
>gb|AY892100.1| Synthetic construct Homo sapiens clone FLH026708.01L Rho guanine exchange factor (GEF) mRNA, partial cds Length = 1266 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 525 atgttggagaagaggtggtg 544 |||||||||||||||||||| Sbjct: 131 atgttggagaagaggtggtg 112
>gb|AY889643.1| Synthetic construct Homo sapiens clone FLH026712.01X Rho guanine exchange factor (GEF) mRNA, complete cds Length = 1266 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 525 atgttggagaagaggtggtg 544 |||||||||||||||||||| Sbjct: 131 atgttggagaagaggtggtg 112
>dbj|BS000127.1| Pan troglodytes chromosome 22 clone:PTB-099K02, map 22, complete sequences Length = 191424 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 273 tgtaggtagatggatggatt 292 |||||||||||||||||||| Sbjct: 124622 tgtaggtagatggatggatt 124641
>dbj|AK110327.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-164-D08, full insert sequence Length = 2577 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 99 gacaccaacaacgaccgccg 118 |||||||||||||||||||| Sbjct: 601 gacaccaacaacgaccgccg 620
>gb|AF161219.1|AF161219 Mucor rouxii delta-12 desaturase mRNA, complete cds Length = 1191 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 510 gcgtggtagtgcggcatgttggagaaga 537 ||||||||||| |||||| ||||||||| Sbjct: 1046 gcgtggtagtgaggcatggtggagaaga 1019
>gb|BC002681.1| Homo sapiens Rho guanine exchange factor (GEF) 16, mRNA (cDNA clone MGC:3381 IMAGE:3613623), complete cds Length = 2213 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 525 atgttggagaagaggtggtg 544 |||||||||||||||||||| Sbjct: 530 atgttggagaagaggtggtg 511
>gb|AC151055.3| Mus musculus BAC clone RP23-24A9 from 6, complete sequence Length = 230998 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 gaaagtaaagaaggaactga 156 |||||||||||||||||||| Sbjct: 35474 gaaagtaaagaaggaactga 35455
>gb|AF156226.1|AF156226 Homo sapiens protein 4.1 (EPB4.1) gene, exon 4 and partial cds Length = 213 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 tcttctctgagttcttcctg 325 |||||||||||||||||||| Sbjct: 26 tcttctctgagttcttcctg 7
>gb|AE003830.3| Drosophila melanogaster chromosome 2R, section 20 of 73 of the complete sequence Length = 240481 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 551 gtgcgtgtccgtgatgttgtggaa 574 |||||||| ||||||||||||||| Sbjct: 89620 gtgcgtgtacgtgatgttgtggaa 89597
>emb|CR760193.2| Xenopus tropicalis finished cDNA, clone TNeu015f08 Length = 1423 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 592 cgtagtcccggtccatggtggcga 615 ||||||||||| |||||||||||| Sbjct: 48 cgtagtcccgggccatggtggcga 25
>gb|AC107773.9| Mus musculus chromosome 18, clone RP23-102H15, complete sequence Length = 250096 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 304 cctcttctctgagttcttcctgga 327 ||||||||||||||||||| |||| Sbjct: 104954 cctcttctctgagttcttcttgga 104931
>gb|AC005974.1|AC005974 Drosophila melanogaster, chromosome 2R, region 46E1-46F6, P1 clones DS05033, DS01913, and DS05181, complete sequence Length = 158983 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 551 gtgcgtgtccgtgatgttgtggaa 574 |||||||| ||||||||||||||| Sbjct: 223 gtgcgtgtacgtgatgttgtggaa 246
>gb|AC005544.1|AC005544 Homo sapiens chromosome 17, clone hRPK.349_A_8, complete sequence Length = 169045 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 aggaggaaagtaaagaagga 151 |||||||||||||||||||| Sbjct: 61236 aggaggaaagtaaagaagga 61255
>dbj|AP003477.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB2047A4 Length = 179110 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 300 aggacctcttctctgagttc 319 |||||||||||||||||||| Sbjct: 101449 aggacctcttctctgagttc 101430
>dbj|AP005791.2| Homo sapiens genomic DNA, chromosome 8q22, clone: KB1357H4, complete sequence Length = 160208 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 300 aggacctcttctctgagttc 319 |||||||||||||||||||| Sbjct: 22572 aggacctcttctctgagttc 22553
>ref|NM_203342.1| Homo sapiens erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked) (EPB41), transcript variant 2, mRNA Length = 6369 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 tcttctctgagttcttcctg 325 |||||||||||||||||||| Sbjct: 676 tcttctctgagttcttcctg 657
>ref|NM_203343.1| Homo sapiens erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked) (EPB41), transcript variant 1, mRNA Length = 6064 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 tcttctctgagttcttcctg 325 |||||||||||||||||||| Sbjct: 596 tcttctctgagttcttcctg 577
>ref|NM_004437.2| Homo sapiens erythrocyte membrane protein band 4.1 (elliptocytosis 1, RH-linked) (EPB41), transcript variant 3, mRNA Length = 6193 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 tcttctctgagttcttcctg 325 |||||||||||||||||||| Sbjct: 659 tcttctctgagttcttcctg 640
>emb|BX284624.4| Mouse DNA sequence from clone RP23-299A2 on chromosome 2, complete sequence Length = 209836 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 274 gtaggtagatggatggatta 293 |||||||||||||||||||| Sbjct: 18720 gtaggtagatggatggatta 18739
>dbj|AB209649.1| Homo sapiens mRNA for Protein 4.1 variant protein Length = 5770 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 tcttctctgagttcttcctg 325 |||||||||||||||||||| Sbjct: 604 tcttctctgagttcttcctg 585
>dbj|AP006352.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT40O04, TM0348, complete sequence Length = 105070 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 293 acttgtaaggacctcttctc 312 |||||||||||||||||||| Sbjct: 40547 acttgtaaggacctcttctc 40566
>emb|AL627123.13| Mouse DNA sequence from clone RP23-351I23 on chromosome 4, complete sequence Length = 185022 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 525 atgttggagaagaggtggtg 544 |||||||||||||||||||| Sbjct: 118650 atgttggagaagaggtggtg 118669
>gb|M61733.1|HUMEMP41 Homo sapiens erythroid membrane protein 4.1 mRNA, complete cds Length = 3043 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 tcttctctgagttcttcctg 325 |||||||||||||||||||| Sbjct: 682 tcttctctgagttcttcctg 663
>gb|M14993.1|HUMELIA Human structural protein 4.1 mRNA, complete cds Length = 2867 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 tcttctctgagttcttcctg 325 |||||||||||||||||||| Sbjct: 665 tcttctctgagttcttcctg 646
>gb|J03796.1|HUMELI Human erythroid isoform protein 4.1 mRNA, complete cds Length = 2677 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 tcttctctgagttcttcctg 325 |||||||||||||||||||| Sbjct: 540 tcttctctgagttcttcctg 521
>dbj|AB052087.1| Mucor circinelloides D12d mRNA for delta-12 fatty acid desaturase, complete cds Length = 1366 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 510 gcgtggtagtgcggcatgttggagaaga 537 ||||||||||| |||||| ||||||||| Sbjct: 1102 gcgtggtagtgaggcatggtggagaaga 1075
>dbj|D89016.1| Homo sapiens mRNA for Neuroblastoma, complete cds Length = 2219 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 525 atgttggagaagaggtggtg 544 |||||||||||||||||||| Sbjct: 558 atgttggagaagaggtggtg 539 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,363,995 Number of Sequences: 3902068 Number of extensions: 4363995 Number of successful extensions: 79182 Number of sequences better than 10.0: 164 Number of HSP's better than 10.0 without gapping: 164 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 78814 Number of HSP's gapped (non-prelim): 346 length of query: 627 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 604 effective length of database: 17,143,297,704 effective search space: 10354551813216 effective search space used: 10354551813216 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)