ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags11i02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1JI23_HORVU (P32024) 23 kDa jasmonate-induced protein 128 1e-29
2Y018_METJA (Q60324) Hypothetical protein MJ0018 30 7.6
3ZAPA_PROMI (Q11137) Extracellular metalloprotease precursor (EC ... 29 10.0
4ALR2_CLOAB (Q97DY9) Alanine racemase 2 (EC 5.1.1.1) 29 10.0

>JI23_HORVU (P32024) 23 kDa jasmonate-induced protein|
          Length = 210

 Score =  128 bits (322), Expect = 1e-29
 Identities = 60/61 (98%), Positives = 60/61 (98%)
 Frame = -1

Query: 311 VYTEIREEGHYPSVGSWDYIYNVKLKNSRVTSIDSNYGYVSKADIGEGTTMNARGVFEFP 132
           VYTEIREEGHYPSVGSWDYIYNVKLKNS VTSIDSNYGYVSKADIGEGTTMNARGVFEFP
Sbjct: 150 VYTEIREEGHYPSVGSWDYIYNVKLKNSSVTSIDSNYGYVSKADIGEGTTMNARGVFEFP 209

Query: 131 Y 129
           Y
Sbjct: 210 Y 210



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>Y018_METJA (Q60324) Hypothetical protein MJ0018|
          Length = 524

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 20/79 (25%), Positives = 41/79 (51%)
 Frame = +3

Query: 72  DATQDLKTTITTRCLQRDLVGKLENSTCVHGSAFTDVSLGNVSIVAINRGDS*IFQLHIV 251
           D + D+  TI ++C++ + +G++     + GSA  +  LGN  ++ IN+     FQ ++ 
Sbjct: 116 DVSGDISKTINSKCVEENAIGEVYGDIYLEGSA--NYKLGN--LLCINK-----FQTYLT 166

Query: 252 DIIPASHTWVVPFLADFSV 308
                S    VP++ +F +
Sbjct: 167 G--SGSLKVYVPYIQEFII 183



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>ZAPA_PROMI (Q11137) Extracellular metalloprotease precursor (EC 3.4.24.-)|
          Length = 491

 Score = 29.3 bits (64), Expect = 10.0
 Identities = 15/57 (26%), Positives = 26/57 (45%)
 Frame = -1

Query: 308 YTEIREEGHYPSVGSWDYIYNVKLKNSRVTSIDSNYGYVSKADIGEGTTMNARGVFE 138
           + E+++E    S+ +W  I N+K     V ++D       K DI  G   +  G F+
Sbjct: 86  FNELQKEHARKSLDAWSDIANIKFTEVAVGNVDGMKASDVKTDITFGNIYDPNGTFQ 142



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>ALR2_CLOAB (Q97DY9) Alanine racemase 2 (EC 5.1.1.1)|
          Length = 395

 Score = 29.3 bits (64), Expect = 10.0
 Identities = 20/65 (30%), Positives = 32/65 (49%)
 Frame = -3

Query: 435 NPAKLNSNEFTYISIIFQLKKHALYPKLYYSAYSNINYTYPGVH*NPRGRALPKCGKLGL 256
           NP   +     + +IIFQL+K  L P++ ++A S     YP  H +     + +CG L  
Sbjct: 195 NPDFTHKQIECFNNIIFQLQKQKLRPRIIHAANSTGIIRYPEAHYD-----MVRCGTLLF 249

Query: 255 YLQCE 241
            L+ E
Sbjct: 250 GLEHE 254


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 87,728,764
Number of Sequences: 219361
Number of extensions: 1793460
Number of successful extensions: 3418
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3359
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3418
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5767334219
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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