ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags11h16
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AF307145.1| Hordeum vulgare subsp. vulgare glutamine-dependen... 549 e-153
2gb|AY621539.1| Triticum aestivum glutamine-dependent asparagine ... 460 e-126
3gb|BT009245.1| Triticum aestivum clone wlk1.pk0018.d4:fis, full ... 454 e-125
4gb|BT009049.1| Triticum aestivum clone wdk9n1.pk001.f6:fis, full... 204 1e-49
5gb|AY193714.1| Hordeum vulgare asparagine synthetase 2 (AS2) mRN... 196 3e-47
6emb|X84448.1|BOASPSYN B.oleracea mRNA for asparagine synthetase 68 2e-08
7emb|X89410.1|LJAS2GENE L.japonicus mRNA for asparagine synthetas... 64 3e-07
8gb|AY108716.1| Zea mays PCO093600 mRNA sequence 64 3e-07
9emb|AJ496567.2|PSY496567 Pinus sylvestris mRNA for putative aspa... 62 1e-06
10dbj|AB050900.1| Raphanus sativus Asn1 mRNA for asparagine synthe... 60 4e-06
11gb|DQ227307.1| Glycine max asparagine synthetase mRNA, complete cds 58 2e-05
12emb|X89409.1|LJAS1GENE L.japonicus mRNA for asparagine synthetas... 58 2e-05
13emb|X67958.1|AOASPSYNM A.officinalis mRNA for asparagine synthetase 58 2e-05
14gb|AF190729.1| Helianthus annuus asparagine synthetase (HAS2) mR... 58 2e-05
15gb|U77679.1|GMU77679 Glycine max asparagine synthetase 1 (AS1) m... 56 7e-05
16emb|X52180.1|PSAS2 Pea AS2 root mRNA for asparagine synthase (EC... 54 3e-04
17dbj|AB035247.1| Astragalus sinicus AsAS1 mRNA for asparagine syn... 54 3e-04
18gb|U77678.1|GMU77678 Glycine max asparagine synthetase 2 (AS2) m... 52 0.001
19emb|Z72354.1|VFAS1 V.faba mRNA for asparagine synthetase 50 0.004
20emb|X52179.1|PSAS1 Pea AS1 nodule mRNA for asparagine synthase (... 50 0.004
21emb|AJ133522.1|PVU133522 Phaseolus vulgaris mRNA for asparagine ... 50 0.004
22emb|CT573508.2| Medicago truncatula chromosome 5 clone mth2-29p1... 50 0.004
23gb|U55874.1|GMU55874 Glycine max asparagine synthetase mRNA, com... 50 0.004
24emb|AJ009952.1|PVU9952 Phaseolus vulgaris mRNA for asparagine sy... 48 0.017
25gb|AY081945.1| Securigera parviflora asparagine synthetase (As1)... 48 0.017
26ref|NM_114602.2| Arabidopsis thaliana ASN1 (DARK INDUCIBLE 6) AT... 44 0.26
27ref|NM_180333.1| Arabidopsis thaliana ASN1 (DARK INDUCIBLE 6) AT... 44 0.26
28gb|AY096592.1| Arabidopsis thaliana putative glutamine-dependent... 44 0.26
29gb|AY072214.1| Arabidopsis thaliana putative glutamine-dependent... 44 0.26
30gb|AF419557.1|AF419557 Arabidopsis thaliana AT3g47340/T21L8_90 m... 44 0.26
31emb|BX823779.1|CNS0A6KC Arabidopsis thaliana Full-length cDNA Co... 44 0.26
32gb|L29083.1|ATHMTGDAS Arabidopsis thaliana (clone At-ASN1) gluta... 44 0.26
33gb|CP000133.1| Rhizobium etli CFN 42, complete genome 42 1.0
34gb|U89923.1|MSU89923 Medicago sativa asparagine synthetase mRNA,... 42 1.0
35gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome 40 4.1
36emb|AL732586.6| Human DNA sequence from clone RP11-549H3 on chro... 40 4.1
37emb|X99552.1|AOASPS A.officinalis gene encoding asparagine synth... 40 4.1
38gb|AC087692.7| Homo sapiens chromosome 8, clone RP11-67D13, comp... 40 4.1
39gb|AC021523.8| Homo sapiens chromosome 8, clone RP11-336N16, com... 40 4.1
40gb|AF014055.1| Triphysaria versicolor asparagine synthetase (AS)... 40 4.1
41gb|AC132436.3| Mus musculus BAC clone RP23-226J18 from 1, comple... 40 4.1 
>gb|AF307145.1| Hordeum vulgare subsp. vulgare glutamine-dependent asparagine
            synthetase 1 mRNA, complete cds
          Length = 1973

 Score =  549 bits (277), Expect = e-153
 Identities = 302/312 (96%), Gaps = 1/312 (0%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaacggcacagcaggacaggacaccatcaactctcaattgcgacaccaggtgccgcancc 60
            |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 1854 aaacggca-agcaggacaggacaccatcaactctcaattgcgacaccaggtgccgcaacc 1796

                                                                        
Query: 61   ttgatcatnctcggctnntngctggntcctgccntgatggtngctgggagatgctcctgc 120
            |||||||| |||||||  | ||||| ||||||| ||||||| ||||||||||||||||||
Sbjct: 1795 ttgatcatcctcggcttcttgctggttcctgccatgatggttgctgggagatgctcctgc 1736

                                                                        
Query: 121  tcataggccgngagatggactccaagtgctgctctccctgagggatccaggttccccgac 180
            |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1735 tcataggccgagagatggactccaagtgctgctctccctgagggatccaggttccccgac 1676

                                                                        
Query: 181  caccgagcatcccactctactgccttcgccgtgctgcatgcgacgcttggcccgcctggc 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1675 caccgagcatcccactctactgccttcgccgtgctgcatgcgacgcttggcccgcctggc 1616

                                                                        
Query: 241  actgtcaggattgccgagttctgggggaagaacctctcaaatatcatcctgtaacagtag 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1615 actgtcaggattgccgagttctgggggaagaacctctcaaatatcatcctgtaacagtag 1556

                        
Query: 301  gcctcttttgta 312
            ||||||||||||
Sbjct: 1555 gcctcttttgta 1544
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>gb|AY621539.1| Triticum aestivum glutamine-dependent asparagine synthetase (ASN1)
            mRNA, complete cds
          Length = 1815

 Score =  460 bits (232), Expect = e-126
 Identities = 283/303 (93%)
 Strand = Plus / Minus

                                                                        
Query: 10   agcaggacaggacaccatcaactctcaattgcgacaccaggtgccgcanccttgatcatn 69
            ||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||| 
Sbjct: 1796 agcaggacaggacaccatcaactctcaattgcgacaccaggcgccgcaacctcgatcatc 1737

                                                                        
Query: 70   ctcggctnntngctggntcctgccntgatggtngctgggagatgctcctgctcataggcc 129
            |||||||  | ||||| ||||||| ||||||| ||||||||||||||||| |||||||||
Sbjct: 1736 ctcggcttcttgctggttcctgccatgatggttgctgggagatgctcctgttcataggcc 1677

                                                                        
Query: 130  gngagatggactccaagtgctgctctccctgagggatccaggttccccgaccaccgagca 189
            | ||||||||||||||||||||||||||||||||||||||||||||| |||||| | |||
Sbjct: 1676 gagagatggactccaagtgctgctctccctgagggatccaggttccctgaccactgggca 1617

                                                                        
Query: 190  tcccactctactgccttcgccgtgctgcatgcgacgcttggcccgcctggcactgtcagg 249
            ||||||||||| |||||||||||||||||||| ||||||||||| |||||||| ||||||
Sbjct: 1616 tcccactctaccgccttcgccgtgctgcatgcaacgcttggcccacctggcaccgtcagg 1557

                                                                        
Query: 250  attgccgagttctgggggaagaacctctcaaatatcatcctgtaacagtaggcctctttt 309
            || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1556 atcgccgagttctgggggaagaacctctcaaatatcatcctgtaacagtaggcctctttt 1497

               
Query: 310  gta 312
            |||
Sbjct: 1496 gta 1494
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>gb|BT009245.1| Triticum aestivum clone wlk1.pk0018.d4:fis, full insert mRNA sequence
          Length = 2064

 Score =  454 bits (229), Expect = e-125
 Identities = 290/312 (92%), Gaps = 1/312 (0%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaacggcacagcaggacaggacaccatcaactctcaattgcgacaccaggtgccgcancc 60
            |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| ||
Sbjct: 1838 aaacggca-agcaggacaggacaccatcaactctcaattgcgacaccaggcgccgcaacc 1780

                                                                        
Query: 61   ttgatcatnctcggctnntngctggntcctgccntgatggtngctgggagatgctcctgc 120
            | |||||| || ||||  | ||||| ||||||| ||||||| ||||||||||||||||| 
Sbjct: 1779 tcgatcatccttggcttcttgctggttcctgccatgatggttgctgggagatgctcctgt 1720

                                                                        
Query: 121  tcataggccgngagatggactccaagtgctgctctccctgagggatccaggttccccgac 180
            |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1719 tcataggccgagagatggactccaagtgctgctctccctgagggatccaggttccctgac 1660

                                                                        
Query: 181  caccgagcatcccactctactgccttcgccgtgctgcatgcgacgcttggcccgcctggc 240
            ||| | |||||||||||||| |||||||||||||||||||| ||||||||||| ||||||
Sbjct: 1659 cactgggcatcccactctaccgccttcgccgtgctgcatgcaacgcttggcccacctggc 1600

                                                                        
Query: 241  actgtcaggattgccgagttctgggggaagaacctctcaaatatcatcctgtaacagtag 300
            || |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1599 accgtcaggatcgccgagttctgggggaagaacctctcaaatatcatcctgtaacagtag 1540

                        
Query: 301  gcctcttttgta 312
            ||||||||||||
Sbjct: 1539 gcctcttttgta 1528
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>gb|BT009049.1| Triticum aestivum clone wdk9n1.pk001.f6:fis, full insert mRNA
            sequence
          Length = 2119

 Score =  204 bits (103), Expect = 1e-49
 Identities = 171/194 (88%)
 Strand = Plus / Minus

                                                                        
Query: 115  tcctgctcataggccgngagatggactccaagtgctgctctccctgagggatccaggttc 174
            |||||||| ||||| | ||||||||||||||| ||||||||||| ||||| |||||||||
Sbjct: 1739 tcctgctcgtaggctgagagatggactccaagcgctgctctcccagaggggtccaggttc 1680

                                                                        
Query: 175  cccgaccaccgagcatcccactctactgccttcgccgtgctgcatgcgacgcttggcccg 234
            || |||||  | |||||||||||||  ||||| || |||||||| || ||||||||||||
Sbjct: 1679 ccagaccattgggcatcccactctatagccttggctgtgctgcacgccacgcttggcccg 1620

                                                                        
Query: 235  cctggcactgtcaggattgccgagttctgggggaagaacctctcaaatatcatcctgtaa 294
            |||||||| || ||||| |||||| ||||||||||| |||||||||| ||||||||||||
Sbjct: 1619 cctggcaccgtgaggatcgccgagctctgggggaagtacctctcaaagatcatcctgtaa 1560

                          
Query: 295  cagtaggcctcttt 308
             |||||||||||||
Sbjct: 1559 tagtaggcctcttt 1546
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>gb|AY193714.1| Hordeum vulgare asparagine synthetase 2 (AS2) mRNA, complete cds
          Length = 1867

 Score =  196 bits (99), Expect = 3e-47
 Identities = 170/194 (87%)
 Strand = Plus / Minus

                                                                        
Query: 115  tcctgctcataggccgngagatggactccaagtgctgctctccctgagggatccaggttc 174
            |||||||| ||||| | ||||||||||||||| ||||||||||| ||||| |||||||||
Sbjct: 1670 tcctgctcgtaggctgagagatggactccaagcgctgctctcccagaggggtccaggttc 1611

                                                                        
Query: 175  cccgaccaccgagcatcccactctactgccttcgccgtgctgcatgcgacgcttggcccg 234
            || |||||| | || |||||||||| |||||| || |||||||| || ||||||||||||
Sbjct: 1610 ccagaccactgcgcgtcccactctattgccttggctgtgctgcacgccacgcttggcccg 1551

                                                                        
Query: 235  cctggcactgtcaggattgccgagttctgggggaagaacctctcaaatatcatcctgtaa 294
            |||||||| || ||||| |||||| |||| |||||| ||||||| || ||||||||||||
Sbjct: 1550 cctggcaccgtgaggatcgccgagctctgagggaagtacctctcgaagatcatcctgtaa 1491

                          
Query: 295  cagtaggcctcttt 308
             |||||||||||||
Sbjct: 1490 tagtaggcctcttt 1477
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>emb|X84448.1|BOASPSYN B.oleracea mRNA for asparagine synthetase
          Length = 2085

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 52/58 (89%)
 Strand = Plus / Minus

                                                                      
Query: 251  ttgccgagttctgggggaagaacctctcaaatatcatcctgtaacagtaggcctcttt 308
            ||||||||||||| ||||||||||||||||| ||||| |||||| |||| || |||||
Sbjct: 1569 ttgccgagttctgtgggaagaacctctcaaagatcattctgtaatagtatgcttcttt 1512
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>emb|X89410.1|LJAS2GENE L.japonicus mRNA for asparagine synthetase (clone LJAS2)
          Length = 2187

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 50/56 (89%)
 Strand = Plus / Minus

                                                                    
Query: 253  gccgagttctgggggaagaacctctcaaatatcatcctgtaacagtaggcctcttt 308
            ||||||||||| || |||||||||||||| |||||||||||| | ||||| |||||
Sbjct: 1676 gccgagttctgaggaaagaacctctcaaagatcatcctgtaataataggcttcttt 1621
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>gb|AY108716.1| Zea mays PCO093600 mRNA sequence
          Length = 673

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 86/104 (82%)
 Strand = Plus / Minus

                                                                       
Query: 202 gccttcgccgtgctgcatgcgacgcttggcccgcctggcactgtcaggattgccgagttc 261
           ||||| || |||||||| || || |||||||| || || || |||||||| || || |||
Sbjct: 560 gccttggctgtgctgcacgccacacttggcccaccaggtaccgtcaggatagcagatttc 501

                                                       
Query: 262 tgggggaagaacctctcaaatatcatcctgtaacagtaggcctc 305
           || |||||||||||||| || | |||||||||  ||||||||||
Sbjct: 500 tgtgggaagaacctctcgaagaccatcctgtagtagtaggcctc 457
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>emb|AJ496567.2|PSY496567 Pinus sylvestris mRNA for putative asparagine synthetase (asn1 gene)
          Length = 2110

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 103/127 (81%)
 Strand = Plus / Minus

                                                                        
Query: 186  agcatcccactctactgccttcgccgtgctgcatgcgacgcttggcccgcctggcactgt 245
            ||||||||| || |||||||| || ||||| || || |||||||||||||| || || ||
Sbjct: 1691 agcatcccattccactgcctttgcggtgctacaagccacgcttggcccgcccgggaccgt 1632

                                                                        
Query: 246  caggattgccgagttctgggggaagaacctctcaaatatcatcctgtaacagtaggcctc 305
            ||    ||||| |||||| ||  |||| || |||||||||||||||||  |||| |||||
Sbjct: 1631 caaccgtgccgcgttctgaggatagaatctttcaaatatcatcctgtagtagtacgcctc 1572

                   
Query: 306  ttttgta 312
             ||||||
Sbjct: 1571 ctttgta 1565
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>dbj|AB050900.1| Raphanus sativus Asn1 mRNA for asparagine synthetase, complete cds
          Length = 2088

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                      
Query: 251  ttgccgagttctgggggaagaacctctcaaatatcatcctgtaacagtaggcctcttt 308
            ||||||||||||| |||||||||||||| || ||||| |||||| |||| || |||||
Sbjct: 1589 ttgccgagttctgtgggaagaacctctcgaagatcattctgtaatagtaagcttcttt 1532
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>gb|DQ227307.1| Glycine max asparagine synthetase mRNA, complete cds
          Length = 1752

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 119/149 (79%)
 Strand = Plus / Minus

                                                                        
Query: 139  actccaagtgctgctctccctgagggatccaggttccccgaccaccgagcatcccactct 198
            ||||||||||||||||| || || ||||| |||||    |||||   |||||||||||| 
Sbjct: 1653 actccaagtgctgctctaccagatggatcaaggttgttagaccaagcagcatcccactca 1594

                                                                        
Query: 199  actgccttcgccgtgctgcatgcgacgcttggcccgcctggcactgtcaggattgccgag 258
            || || || || ||||| ||||| || ||||| || || || ||  ||||  | || |||
Sbjct: 1593 acagctttggctgtgctacatgcaacacttggtcctccaggaacactcagcctggctgag 1534

                                         
Query: 259  ttctgggggaagaacctctcaaatatcat 287
            ||||| |||||||||||||||||||||||
Sbjct: 1533 ttctgagggaagaacctctcaaatatcat 1505
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>emb|X89409.1|LJAS1GENE L.japonicus mRNA for asparagine synthetase (clone LJAS1)
          Length = 2053

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 128/161 (79%)
 Strand = Plus / Minus

                                                                        
Query: 133  agatggactccaagtgctgctctccctgagggatccaggttccccgaccaccgagcatcc 192
            ||||| ||||| ||||||||||| ||||| ||||| |||||    |||||   |||||||
Sbjct: 1750 agatgcactcctagtgctgctctacctgaaggatcaaggttattagaccaagcagcatcc 1691

                                                                        
Query: 193  cactctactgccttcgccgtgctgcatgcgacgcttggcccgcctggcactgtcaggatt 252
            ||||| |||||||| || ||||| ||||| ||  |||| || || || || || ||  | 
Sbjct: 1690 cactcaactgcctttgctgtgctacatgcaacagttggtcctccaggaacagttagccta 1631

                                                     
Query: 253  gccgagttctgggggaagaacctctcaaatatcatcctgta 293
            || |||||||| ||||||||||| ||||| ||||| |||||
Sbjct: 1630 gctgagttctgtgggaagaacctttcaaagatcattctgta 1590
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>emb|X67958.1|AOASPSYNM A.officinalis mRNA for asparagine synthetase
          Length = 1978

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 140/177 (79%)
 Strand = Plus / Minus

                                                                        
Query: 135  atggactccaagtgctgctctccctgagggatccaggttccccgaccaccgagcatccca 194
            |||||| || || ||||||||||| || |||||||  ||   |||||| ||||| |||||
Sbjct: 1705 atggacgccgagagctgctctccccgacggatccaaattgttcgaccagcgagcgtccca 1646

                                                                        
Query: 195  ctctactgccttcgccgtgctgcatgcgacgcttggcccgcctggcactgtcaggattgc 254
             || |  ||||||||||||||||| || | |||||| || || || || || |   | ||
Sbjct: 1645 ttcgatagccttcgccgtgctgcaagcaatgcttggacctccagggacagtaaatctcgc 1586

                                                                     
Query: 255  cgagttctgggggaagaacctctcaaatatcatcctgtaacagtaggcctcttttgt 311
            ||||||||| ||||||||||| ||||| ||||| |||||  | || |||||||||||
Sbjct: 1585 cgagttctgagggaagaacctttcaaagatcattctgtagtaataagcctcttttgt 1529
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>gb|AF190729.1| Helianthus annuus asparagine synthetase (HAS2) mRNA, complete cds
          Length = 1850

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                 
Query: 187  gcatcccactctactgccttcgccgtgctgcatgcgacgcttggcccgcctgg 239
            |||||||||||||| ||||| |||||||||||||| || ||||| || |||||
Sbjct: 1623 gcatcccactctaccgccttagccgtgctgcatgccacacttggaccccctgg 1571
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>gb|U77679.1|GMU77679 Glycine max asparagine synthetase 1 (AS1) mRNA, complete cds
          Length = 2108

 Score = 56.0 bits (28), Expect = 7e-05
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                            
Query: 256  gagttctgggggaagaacctctcaaatatcat 287
            |||||||| |||||||||||||||||||||||
Sbjct: 1679 gagttctgagggaagaacctctcaaatatcat 1648



 Score = 46.1 bits (23), Expect = 0.067
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 139  actccaagtgctgctctccctgagggatccaggtt 173
            ||||||||||||||||| ||||| ||||| |||||
Sbjct: 1796 actccaagtgctgctctacctgatggatcaaggtt 1762
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>emb|X52180.1|PSAS2 Pea AS2 root mRNA for asparagine synthase (EC 6.3.5.4)
          Length = 2002

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                       
Query: 251  ttgccgagttctgggggaagaacctctcaaatatcatcctgta 293
            ||||||||||||| |||||||||| |||||| ||||| |||||
Sbjct: 1635 ttgccgagttctgagggaagaaccgctcaaagatcattctgta 1593
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>dbj|AB035247.1| Astragalus sinicus AsAS1 mRNA for asparagine synthetase, complete cds
          Length = 1931

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                       
Query: 251  ttgccgagttctgggggaagaacctctcaaatatcatcctgta 293
            |||| |||||||| ||||||||||||||||| ||||| |||||
Sbjct: 1542 ttgctgagttctgagggaagaacctctcaaagatcattctgta 1500
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>gb|U77678.1|GMU77678 Glycine max asparagine synthetase 2 (AS2) mRNA, complete cds
          Length = 2143

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                  
Query: 256  gagttctgggggaagaacctctcaaatatcatcctgta 293
            |||||||| ||||||||||||||||| ||||| |||||
Sbjct: 1683 gagttctgagggaagaacctctcaaagatcattctgta 1646



 Score = 46.1 bits (23), Expect = 0.067
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 139  actccaagtgctgctctccctgagggatccaggtt 173
            ||||||||||||||||| || |||||||| |||||
Sbjct: 1800 actccaagtgctgctctaccagagggatcaaggtt 1766
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>emb|Z72354.1|VFAS1 V.faba mRNA for asparagine synthetase
          Length = 2154

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 118/149 (79%)
 Strand = Plus / Minus

                                                                        
Query: 139  actccaagtgctgctctccctgagggatccaggttccccgaccaccgagcatcccactct 198
            ||||||||||||||||| || || ||||| ||||| || |||||   ||||||||| || 
Sbjct: 1766 actccaagtgctgctctaccagatggatcaaggttgcctgaccaagaagcatcccattca 1707

                                                                        
Query: 199  actgccttcgccgtgctgcatgcgacgcttggcccgcctggcactgtcaggattgccgag 258
            |  || ||  | ||||||||||| || || || || || || ||||||||  ||||||||
Sbjct: 1706 atagctttttctgtgctgcatgcaacactaggtcctccaggaactgtcagccttgccgag 1647

                                         
Query: 259  ttctgggggaagaacctctcaaatatcat 287
            ||||| ||||| || || ||||| |||||
Sbjct: 1646 ttctgagggaaaaatctttcaaagatcat 1618
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>emb|X52179.1|PSAS1 Pea AS1 nodule mRNA for asparagine synthase (EC 6.3.5.4)
          Length = 2200

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 118/149 (79%)
 Strand = Plus / Minus

                                                                        
Query: 139  actccaagtgctgctctccctgagggatccaggttccccgaccaccgagcatcccactct 198
            ||||||||||||||||| || || |||||||||||    |||||   ||||||||| || 
Sbjct: 1742 actccaagtgctgctctaccagaaggatccaggttgtttgaccatgaagcatcccattca 1683

                                                                        
Query: 199  actgccttcgccgtgctgcatgcgacgcttggcccgcctggcactgtcaggattgccgag 258
            |  || ||| | ||||||||||| || || || || || || ||||| ||  ||||||||
Sbjct: 1682 atagctttctctgtgctgcatgcaacactaggtcctccaggaactgtaagccttgccgag 1623

                                         
Query: 259  ttctgggggaagaacctctcaaatatcat 287
            ||||| ||||| ||||| ||||| |||||
Sbjct: 1622 ttctgagggaaaaacctttcaaagatcat 1594
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>emb|AJ133522.1|PVU133522 Phaseolus vulgaris mRNA for asparagine synthetase type-I
          Length = 2086

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 118/149 (79%)
 Strand = Plus / Minus

                                                                        
Query: 139  actccaagtgctgctctccctgagggatccaggttccccgaccaccgagcatcccactct 198
            ||||||||||||||||| ||||| ||||| |||||    |||||   |||||||||||| 
Sbjct: 1793 actccaagtgctgctctacctgatggatcaaggttgttagaccaggcagcatcccactca 1734

                                                                        
Query: 199  actgccttcgccgtgctgcatgcgacgcttggcccgcctggcactgtcaggattgccgag 258
            || || || || ||||| ||||| || |||||||| || || ||  | ||  | || |||
Sbjct: 1733 acagcttttgctgtgctacatgcaacacttggccctccaggaacactgagtctagctgag 1674

                                         
Query: 259  ttctgggggaagaacctctcaaatatcat 287
            |  || |||||||||||||||||||||||
Sbjct: 1673 tcttgagggaagaacctctcaaatatcat 1645
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>emb|CT573508.2| Medicago truncatula chromosome 5 clone mth2-29p15, COMPLETE SEQUENCE
          Length = 125647

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 31/33 (93%)
 Strand = Plus / Minus

                                             
Query: 261  ctgggggaagaacctctcaaatatcatcctgta 293
            ||||||||||||||||||||| ||||| |||||
Sbjct: 7110 ctgggggaagaacctctcaaagatcattctgta 7078



 Score = 46.1 bits (23), Expect = 0.067
 Identities = 68/83 (81%)
 Strand = Plus / Minus

                                                                        
Query: 139  actccaagtgctgctctccctgagggatccaggttccccgaccaccgagcatcccactct 198
            ||||||||||||||||| || || ||||| ||||||   |||||   |||||||||||| 
Sbjct: 7521 actccaagtgctgctctaccagaaggatcaaggttcttggaccaagaagcatcccactca 7462

                                   
Query: 199  actgccttcgccgtgctgcatgc 221
            || ||||| || ||||| |||||
Sbjct: 7461 acagccttagctgtgctacatgc 7439
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>gb|U55874.1|GMU55874 Glycine max asparagine synthetase mRNA, complete cds
          Length = 2211

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 259  ttctgggggaagaacctctcaaatatcat 287
            ||||| |||||||||||||||||||||||
Sbjct: 1699 ttctgagggaagaacctctcaaatatcat 1671
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>emb|AJ009952.1|PVU9952 Phaseolus vulgaris mRNA for asparagine synthetase type II
          Length = 2044

 Score = 48.1 bits (24), Expect = 0.017
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 256  gagttctgggggaagaacctctcaaatatcat 287
            |||||||| ||||||||||||||||| |||||
Sbjct: 1548 gagttctgagggaagaacctctcaaagatcat 1517
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>gb|AY081945.1| Securigera parviflora asparagine synthetase (As1) mRNA, complete cds
          Length = 2109

 Score = 48.1 bits (24), Expect = 0.017
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 256  gagttctgggggaagaacctctcaaatatcat 287
            |||||||| ||||||||||||||||| |||||
Sbjct: 1676 gagttctgagggaagaacctctcaaagatcat 1645
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>ref|NM_114602.2| Arabidopsis thaliana ASN1 (DARK INDUCIBLE 6) AT3G47340 (ASN1)
            transcript variant AT3G47340.1 mRNA, complete cds
          Length = 2206

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 256  gagttctgggggaagaacctctcaaatatcatcctgta 293
            |||||||| ||||||||||| ||||| ||||| |||||
Sbjct: 1728 gagttctgcgggaagaacctttcaaagatcattctgta 1691
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>ref|NM_180333.1| Arabidopsis thaliana ASN1 (DARK INDUCIBLE 6) AT3G47340 (ASN1)
            transcript variant AT3G47340.3 mRNA, complete cds
          Length = 2380

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 256  gagttctgggggaagaacctctcaaatatcatcctgta 293
            |||||||| ||||||||||| ||||| ||||| |||||
Sbjct: 1902 gagttctgcgggaagaacctttcaaagatcattctgta 1865
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>gb|AY096592.1| Arabidopsis thaliana putative glutamine-dependent asparagine
            synthetase (At3g47340) mRNA, complete cds
          Length = 1786

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 256  gagttctgggggaagaacctctcaaatatcatcctgta 293
            |||||||| ||||||||||| ||||| ||||| |||||
Sbjct: 1529 gagttctgcgggaagaacctttcaaagatcattctgta 1492
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>gb|AY072214.1| Arabidopsis thaliana putative glutamine-dependent asparagine
            synthetase (At3g47340) mRNA, complete cds
          Length = 2183

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 256  gagttctgggggaagaacctctcaaatatcatcctgta 293
            |||||||| ||||||||||| ||||| ||||| |||||
Sbjct: 1730 gagttctgcgggaagaacctttcaaagatcattctgta 1693
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>gb|AF419557.1|AF419557 Arabidopsis thaliana AT3g47340/T21L8_90 mRNA, complete cds
          Length = 2123

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 256  gagttctgggggaagaacctctcaaatatcatcctgta 293
            |||||||| ||||||||||| ||||| ||||| |||||
Sbjct: 1725 gagttctgcgggaagaacctttcaaagatcattctgta 1688
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>emb|BX823779.1|CNS0A6KC Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS74ZG11 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 513

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                 
Query: 256 gagttctgggggaagaacctctcaaatatcatcctgta 293
           |||||||| ||||||||||| ||||| ||||| |||||
Sbjct: 113 gagttctgcgggaagaacctttcaaagatcattctgta 76
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>gb|L29083.1|ATHMTGDAS Arabidopsis thaliana (clone At-ASN1) glutamine-dependent asparagine
            synthetase mRNA, complete cds
          Length = 1755

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 256  gagttctgggggaagaacctctcaaatatcatcctgta 293
            |||||||| ||||||||||| ||||| ||||| |||||
Sbjct: 1529 gagttctgcgggaagaacctttcaaagatcattctgta 1492
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>gb|CP000133.1| Rhizobium etli CFN 42, complete genome
          Length = 4381608

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 180     ccaccgagcatcccactctac 200
               |||||||||||||||||||||
Sbjct: 3292410 ccaccgagcatcccactctac 3292390
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>gb|U89923.1|MSU89923 Medicago sativa asparagine synthetase mRNA, complete cds
          Length = 2184

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                 
Query: 251  ttgccgagttctgggggaagaacctctcaaatatcat 287
            |||| |||||||| ||||| ||||||||||| |||||
Sbjct: 1720 ttgctgagttctgagggaaaaacctctcaaagatcat 1684
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>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 110     gatgctcctgctcataggcc 129
               ||||||||||||||||||||
Sbjct: 2224484 gatgctcctgctcataggcc 2224503
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>emb|AL732586.6| Human DNA sequence from clone RP11-549H3 on chromosome X, complete
             sequence
          Length = 125933

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 7     cacagcaggacaggacacca 26
             ||||||||||||||||||||
Sbjct: 86898 cacagcaggacaggacacca 86879
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>emb|X99552.1|AOASPS A.officinalis gene encoding asparagine synthetase
          Length = 3812

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 68/84 (80%)
 Strand = Plus / Minus

                                                                        
Query: 135  atggactccaagtgctgctctccctgagggatccaggttccccgaccaccgagcatccca 194
            |||||| || || ||||||||||| || |||||||  ||   |||||| ||||| |||||
Sbjct: 3689 atggacgccgagagctgctctccccgacggatccaaattgttcgaccagcgagcgtccca 3630

                                    
Query: 195  ctctactgccttcgccgtgctgca 218
             || |  |||||||||||||||||
Sbjct: 3629 ttcgatagccttcgccgtgctgca 3606
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>gb|AC087692.7| Homo sapiens chromosome 8, clone RP11-67D13, complete sequence
          Length = 146549

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 146  gtgctgctctccctgagggatcca 169
            |||||||||||| |||||||||||
Sbjct: 3400 gtgctgctctccatgagggatcca 3423
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>gb|AC021523.8| Homo sapiens chromosome 8, clone RP11-336N16, complete sequence
          Length = 170299

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 146    gtgctgctctccctgagggatcca 169
              |||||||||||| |||||||||||
Sbjct: 156531 gtgctgctctccatgagggatcca 156554
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>gb|AF014055.1| Triphysaria versicolor asparagine synthetase (AS) mRNA, complete cds
          Length = 2052

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 65/80 (81%)
 Strand = Plus / Minus

                                                                        
Query: 211  gtgctgcatgcgacgcttggcccgcctggcactgtcaggattgccgagttctgggggaag 270
            |||||||| || || || ||||||||||| || || ||  | || |||||||| ||||| 
Sbjct: 1574 gtgctgcaagccacactcggcccgcctggaacagtgagcttggctgagttctgtgggaaa 1515

                                
Query: 271  aacctctcaaatatcatcct 290
            |||| ||| |||||||||||
Sbjct: 1514 aaccgctcgaatatcatcct 1495
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>gb|AC132436.3| Mus musculus BAC clone RP23-226J18 from 1, complete sequence
          Length = 248067

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 146    gtgctgctctccctgagggatcca 169
              ||||||||||||| ||||||||||
Sbjct: 165502 gtgctgctctcccagagggatcca 165479


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,844,749
Number of Sequences: 3902068
Number of extensions: 1844749
Number of successful extensions: 29960
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 29873
Number of HSP's gapped (non-prelim): 86
length of query: 312
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 290
effective length of database: 17,147,199,772
effective search space: 4972687933880
effective search space used: 4972687933880
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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