>MUTS_AQUAE (O66652) DNA mismatch repair protein mutS|
          Length = 859

 Score = 30.8 bits (68), Expect = 4.0
 Identities = 12/33 (36%), Positives = 22/33 (66%)
 Frame = -1

Query: 532 QAVLEDTKKIIRELQLDENRNKELASALHSQFK 434
           + V+E+ +KI+REL+  EN+ +++   L   FK
Sbjct: 776 EEVVEEARKILRELEEKENKKEDIVPLLEETFK 808

>GP173_BRARE (Q9I918) Probable G-protein coupled receptor 173 (Super conserved|
           receptor expressed in brain 3)
          Length = 387

 Score = 30.4 bits (67), Expect = 5.2
 Identities = 16/40 (40%), Positives = 19/40 (47%)
 Frame = -3

Query: 377 TMPWAAFVNRGVHPQDCFPSFAD*LVGLLKHSTACSRS*P 258
           T  W +F   GV+P  CF    D   GLL H   C R+ P
Sbjct: 338 TTVWMSFAQAGVNPIICFFLNKDLKKGLLAHLPPCCRTPP 377

>SYA_PONPY (Q5RC02) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)|
           (AlaRS)
          Length = 968

 Score = 30.4 bits (67), Expect = 5.2
 Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
 Frame = -1

Query: 682 DVQAESAACVDPDLFTNFLIPNWFEDEVQEPTKCNPFPLPEIYQASQ-NKKQAVLEDTKK 506
           DVQ E A     +     +IP W +DE++E  K     + ++ +AS+ + ++ VLE TK+
Sbjct: 790 DVQREIADL--GEALATAVIPQWQKDELRETLKSLKKVMDDLDRASKADVQKRVLEKTKQ 847

Query: 505 IIRELQLDENRNKEL 461
           +I     D N N+ L
Sbjct: 848 LI-----DSNPNQPL 857

>SLK_MOUSE (O54988) STE20-like serine/threonine-protein kinase (EC 2.7.11.1)|
            (STE20-like kinase) (STE20-related
            serine/threonine-protein kinase) (STE20-related kinase)
            (mSLK) (Serine/threonine-protein kinase 2) (STE20-related
            kinase SMAK) (Etk4)
          Length = 1233

 Score = 30.0 bits (66), Expect = 6.8
 Identities = 15/50 (30%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
 Frame = -1

Query: 568  LPEIYQASQNKKQAVLEDTKKIIREL--QLDENRNKELASALHSQFKDWL 425
            L +     +N+K+ V+ + +K  REL  +L + R +ELA + H+Q ++++
Sbjct: 913  LSKFQNVLKNRKKEVMNEVEKAPRELRRELTKRRKEELAQSQHAQEQEFV 962

>SYA_HUMAN (P49588) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)|
           (AlaRS) (NY-REN-42 antigen)
          Length = 968

 Score = 29.6 bits (65), Expect = 8.9
 Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
 Frame = -1

Query: 682 DVQAESAACVDPDLFTNFLIPNWFEDEVQEPTKCNPFPLPEIYQASQ-NKKQAVLEDTKK 506
           DVQ E A     +     +IP W +DE++E  K     + ++ +AS+ + ++ VLE TK+
Sbjct: 790 DVQREIADL--GEALATAVIPQWQKDELRETLKSLKKVMDDLDRASKADVQKRVLEKTKQ 847

Query: 505 IIRELQLDENRNKEL 461
            I     D N N+ L
Sbjct: 848 FI-----DSNPNQPL 857


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 96,969,148
Number of Sequences: 219361
Number of extensions: 1993005
Number of successful extensions: 4671
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4562
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4671
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6712189044
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)