>GCSPB_TREDE (P62031) Probable glycine dehydrogenase [decarboxylating] subunit 2|
           (EC 1.4.4.2) (Glycine decarboxylase subunit 2) (Glycine
           cleavage system P-protein subunit 2)
          Length = 482

 Score = 32.3 bits (72), Expect = 0.79
 Identities = 21/87 (24%), Positives = 40/87 (45%), Gaps = 8/87 (9%)
 Frame = -1

Query: 478 QKRGGQFRCSRAIEEVAVVVNPSE--------LMLPEDKDESGAIEAVDSVLLSDEAVKV 323
           +KRG   R    + + A   NP+         + +P DKD +  IE +   + +D A  +
Sbjct: 147 EKRGDHARNKILVPDSAHGTNPASAAMVGCEIVNIPSDKDGNVDIEELKKTVGNDTAALM 206

Query: 322 EVAPAVLPMVISYLSDIPVVLHAIGGV 242
              P  L +  +++ +I  ++H  GG+
Sbjct: 207 LTNPNTLGLFETHIKEIAEIVHKAGGL 233

>CF1A_DROME (P16241) POU-domain protein CF1A (Chorion factor 1A) (CF1-A)|
           (Ventral veins lacking protein) (Drifter protein)
          Length = 427

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 17/45 (37%), Positives = 21/45 (46%)
 Frame = +1

Query: 238 NPHHRLHEEPRGCHSSSLSPWAERLGQPQLSPPHRSAKLNPQPQL 372
           +PHH +H  P G HS S SP       P LSP +  +      QL
Sbjct: 387 HPHHDMHGSPMGTHSHSHSP-------PMLSPQNMQSSAVAAHQL 424

>TEGU_EBV (P03186) Large tegument protein|
          Length = 3149

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 18/48 (37%), Positives = 23/48 (47%)
 Frame = +1

Query: 295 PWAERLGQPQLSPPHRSAKLNPQPQLLLIHLCPRVTLTRMGSPPPRLP 438
           P A RL  P +  PH+S   +P P     H  P  T+    +P PRLP
Sbjct: 457 PSAARLPPPVIPIPHQSPPASPTP-----HPAPVSTIAPSVTPSPRLP 499

>LPHN3_HUMAN (Q9HAR2) Latrophilin-3 precursor (Calcium-independent|
            alpha-latrotoxin receptor 3) (Lectomedin-3)
          Length = 1447

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 18/63 (28%), Positives = 21/63 (33%)
 Frame = +1

Query: 241  PHHRLHEEPRGCHSSSLSPWAERLGQPQLSPPHRSAKLNPQPQLLLIHLCPRVTLTRMGS 420
            PHH         HS S  P         L  PHR +     P L  +     VT +    
Sbjct: 1320 PHHYTRRRIPQDHSESFFPLLTNEHTEDLQSPHRDSLYTSMPTLAGVAATESVTTSTQTE 1379

Query: 421  PPP 429
            PPP
Sbjct: 1380 PPP 1382

>EP300_HUMAN (Q09472) E1A-associated protein p300 (EC 2.3.1.48)|
          Length = 2414

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 20/67 (29%), Positives = 29/67 (43%)
 Frame = +1

Query: 235  ENPHHRLHEEPRGCHSSSLSPWAERLGQPQLSPPHRSAKLNPQPQLLLIHLCPRVTLTRM 414
            ++PH +  + P    +   SP      +PQ  PPH S     QPQ    H+ P+ +    
Sbjct: 2290 QSPHLQGQQIPNSLSNQVRSPQPVPSPRPQSQPPHSSPSPRMQPQPSPHHVSPQTS---- 2345

Query: 415  GSPPPRL 435
             SP P L
Sbjct: 2346 -SPHPGL 2351

>RPOB_BACHD (Q9Z9M2) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP|
           beta subunit) (Transcriptase beta chain) (RNA polymerase
           beta subunit)
          Length = 1180

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 20/76 (26%), Positives = 37/76 (48%)
 Frame = -1

Query: 442 IEEVAVVVNPSELMLPEDKDESGAIEAVDSVLLSDEAVKVEVAPAVLPMVISYLSDIPVV 263
           +EE  V +   ++  P+D+D    I  + + L+  E     + PA +   I+Y  ++   
Sbjct: 338 VEEDEVRLQSVKIYAPDDQDGEHVIRVIGNGLVEKEI--KHITPADIIASINYFFNL--- 392

Query: 262 LHAIGGVDSPVDIGVR 215
           LH++GG D    +G R
Sbjct: 393 LHSVGGTDDIDHLGNR 408

>LPP_CHICK (Q5F464) Lipoma-preferred partner homolog|
          Length = 604

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 33/109 (30%), Positives = 43/109 (39%)
 Frame = +1

Query: 190 T*SMMTCIVLLRCPRENPHHRLHEEPRGCHSSSLSPWAERLGQPQLSPPHRSAKLNPQPQ 369
           T S  T  V +R  + +PH++    P+  H  SL P     GQP  +PP R     P  Q
Sbjct: 213 TPSRPTFNVQVRTAQPSPHYQ-PPGPQPTHYGSLGP-----GQPYAAPPARP----PGAQ 262

Query: 370 LLLIHLCPRVTLTRMGSPPPRLPQ*LYCI*TGLPSFGAYSCMHQAPRFQ 516
                        + GSP PR P   Y      PS  +Y    Q  R+Q
Sbjct: 263 -------------QYGSPQPRGPDYGYAPPPARPSEPSYGYAPQQGRYQ 298

>CBP_HUMAN (Q92793) CREB-binding protein (EC 2.3.1.48)|
          Length = 2442

 Score = 30.0 bits (66), Expect = 3.9
 Identities = 25/80 (31%), Positives = 33/80 (41%), Gaps = 11/80 (13%)
 Frame = +1

Query: 229  PRENPHHRLHEEPRGCH------SSSLS-----PWAERLGQPQLSPPHRSAKLNPQPQLL 375
            P     H L  +P+  H      ++SLS     P   +  +PQ  PPH S     QPQ  
Sbjct: 2313 PMSPQQHMLSGQPQASHLPGQQIATSLSNQVRSPAPVQSPRPQSQPPHSSPSPRIQPQPS 2372

Query: 376  LIHLCPRVTLTRMGSPPPRL 435
              H+ P+      GSP P L
Sbjct: 2373 PHHVSPQT-----GSPHPGL 2387

>SH2D3_MOUSE (Q9QZS8) SH2 domain-containing protein 3C (SH2 domain-containing|
           Eph receptor-binding protein 1) (Cas/HEF1-associated
           signal transducer)
          Length = 854

 Score = 29.3 bits (64), Expect = 6.7
 Identities = 15/45 (33%), Positives = 20/45 (44%)
 Frame = +1

Query: 238 NPHHRLHEEPRGCHSSSLSPWAERLGQPQLSPPHRSAKLNPQPQL 372
           +P  R   EP+ C  ++  P  E    P  SP H   K +P P L
Sbjct: 435 SPVARRSSEPQLCPGNTPKPPGESDRAPHASPSHTLCKASPSPSL 479

>TOIP1_RAT (Q5PQX1) Torsin-1A-interacting protein 1 (Lamina-associated|
           polypeptide 1B) (Lamina-associated polypeptide 1C)
          Length = 583

 Score = 29.3 bits (64), Expect = 6.7
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +2

Query: 215 SYSDVHGRIHTTDCMKNHGDVTQVAYHHGQNGWG 316
           SYSDV  RI + D +++  +    A HH  + WG
Sbjct: 229 SYSDVTIRIRSRDSVESRDEAAVAAGHHPDSLWG 262

>SPEN_DROME (Q8SX83) Protein split ends|
          Length = 5560

 Score = 29.3 bits (64), Expect = 6.7
 Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
 Frame = +1

Query: 205  TCIVLLRCPRENPHHRLHEEPRGCHSSSLSPWAERLGQPQLSPPHRSAKL-NPQPQLLLI 381
            T +V +R P  +PH  LH   RG   S L      +G+P +S P    ++   Q Q  LI
Sbjct: 3641 TYMVGIRAP--SPHSPLHSPGRGVAQSRLVGQLSPVGRPMVSQPSPQQQVQQTQQQHALI 3698

Query: 382  HLCPRVTLTRMGSPPPRL 435
                   ++ + SP  R+
Sbjct: 3699 TSPQSSNISPLASPTTRV 3716

>LPHN3_BOVIN (O97827) Latrophilin-3 precursor|
          Length = 1580

 Score = 29.3 bits (64), Expect = 6.7
 Identities = 19/66 (28%), Positives = 24/66 (36%), Gaps = 4/66 (6%)
 Frame = +1

Query: 244  HHRLHEEPRGC----HSSSLSPWAERLGQPQLSPPHRSAKLNPQPQLLLIHLCPRVTLTR 411
            +H+LH   R      HS S  P         L  PHR +     P L  +     VT + 
Sbjct: 1450 NHQLHHYTRRRIPQDHSESFFPLLTNEHTEDLQSPHRDSLYTSMPALAGVPTAESVTTST 1509

Query: 412  MGSPPP 429
               PPP
Sbjct: 1510 QTEPPP 1515

>ZNF31_HUMAN (P17040) Zinc finger protein 31 (Zinc finger protein KOX29) (Zinc|
           finger and SCAN domain-containing protein 20) (Zinc
           finger protein 360)
          Length = 977

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 23/63 (36%), Positives = 29/63 (46%), Gaps = 9/63 (14%)
 Frame = +1

Query: 259 EEPRGCHSSSLSPWAERLGQ--------PQLSPPHRSAKLNPQPQLLLIHLCPRV-TLTR 411
           EE +      + PW E   Q        P L P H +A++ PQP      L PRV TL +
Sbjct: 89  EEAQSFQLQPVDPWPEGQSQKKGVKNTCPDL-PNHLNAEVAPQPLKESAVLTPRVPTLPK 147

Query: 412 MGS 420
           MGS
Sbjct: 148 MGS 150

>IL4RA_PIG (Q863Z5) Interleukin-4 receptor alpha chain precursor (IL-4R-alpha)|
           (CD124 antigen)
          Length = 830

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
 Frame = +1

Query: 277 HSSSLSPWAE--RLGQPQLSPPHRSAKLNPQP 366
           ++S+  PWAE  R+G P+ S   +   LNP+P
Sbjct: 445 NASAPMPWAEFPRVGSPEASSQGKEQPLNPEP 476

>PDXS_STRCO (Q9L286) Pyridoxal biosynthesis lyase pdxS (EC 4.-.-.-)|
          Length = 303

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 20/58 (34%), Positives = 30/58 (51%)
 Frame = -1

Query: 400 LPEDKDESGAIEAVDSVLLSDEAVKVEVAPAVLPMVISYLSDIPVVLHAIGGVDSPVD 227
           L + K+E   +   D+  L   A ++  AP  L   +S L  +PVVL + GGV +P D
Sbjct: 173 LRQIKNEIARLRGYDNNELYAAAKELR-APYELVKEVSELGRLPVVLFSAGGVATPAD 229

>HUTU_MOUSE (Q8VC12) Probable urocanate hydratase (EC 4.2.1.49) (Urocanase)|
           (Imidazolonepropionate hydrolase)
          Length = 676

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
 Frame = -1

Query: 352 VLLSDEAVKVEVAPAVLPMVISYLSDIPVVL----HAIGGVDSPVDIGVRLYMSSYF 194
           +L SD+  +V +A A+   + S     PVVL    H + G DSP      +Y  S F
Sbjct: 511 ILYSDQKGRVAIAVAINQAIASGKIKAPVVLSRDHHDVSGTDSPFRETSNIYDGSAF 567

>NIFB_RHIME (P09824) FeMo cofactor biosynthesis protein nifB|
          Length = 490

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 18/69 (26%), Positives = 33/69 (47%)
 Frame = -1

Query: 499 DACRNKPQKRGGQFRCSRAIEEVAVVVNPSELMLPEDKDESGAIEAVDSVLLSDEAVKVE 320
           DAC +  + R    R +R I ++ + ++ + L LP+  DE   +  VD V ++   V   
Sbjct: 127 DACYDWKKTRATFERVAREIPDIRLCISTNGLSLPDHVDELAEMN-VDHVTITINMVDPR 185

Query: 319 VAPAVLPMV 293
           V   + P +
Sbjct: 186 VGVKIYPWI 194

>CBP_MOUSE (P45481) CREB-binding protein (EC 2.3.1.48)|
          Length = 2441

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 24/80 (30%), Positives = 33/80 (41%), Gaps = 11/80 (13%)
 Frame = +1

Query: 229  PRENPHHRLHEEPRGCH------SSSLS-----PWAERLGQPQLSPPHRSAKLNPQPQLL 375
            P     H L  +P+  H      ++SLS     P   +  +PQ  PPH S     QPQ  
Sbjct: 2312 PMSPQQHMLSGQPQASHLPGQQIATSLSNQVRSPAPVQSPRPQSQPPHSSPSPRIQPQPS 2371

Query: 376  LIHLCPRVTLTRMGSPPPRL 435
              H+ P+      G+P P L
Sbjct: 2372 PHHVSPQT-----GTPHPGL 2386


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 70,700,088
Number of Sequences: 219361
Number of extensions: 1459270
Number of successful extensions: 4252
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 4122
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4250
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3869946934
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)